No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g32870 |
| malus_domestica | MD07G1298600.v1.1 |
| pyrus_communis | pycom07g27100 |
| rosa_chinensis | RchiOBHm_Chr1g0382821 |
| rosa_roxburghii | Rroxscaffold_4G00277870 |
| rosa_rugosa | Rorug01G0436500 |
| rosa_samantha | Rh1AG461500 Rh1BG418100 Rh1CG432000 Rh1DG450300 |
| rosa_wichuraiana | Rw1G041030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 172 |
| AciI | CCGC | 1 cut(s) | 39 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 45, 82 |
| AgsI | TTSAA | 1 cut(s) | 203 |
| AluBI | AGCT | 1 cut(s) | 95 |
| AluI | AGCT | 1 cut(s) | 95 |
| AoxI | GGCC | 1 cut(s) | 138 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| AsuC2I | CCSGG | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 1 cut(s) | 157 |
| BanI | GGYRCC | 1 cut(s) | 172 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BccI | CCATC | 1 cut(s) | 119 |
| BcnI | CCSGG | 1 cut(s) | 46 |
| BfaI | CTAG | 1 cut(s) | 29 |
| BisI | GCNGC | 2 cut(s) | 36, 39 |
| BlsI | GCNGC | 2 cut(s) | 37, 40 |
| Bme1390I | CCNGG | 1 cut(s) | 46 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BmrFI | CCNGG | 1 cut(s) | 46 |
| BmsI | GCATC | 2 cut(s) | 9, 150 |
| BpuMI | CCSGG | 1 cut(s) | 46 |
| BsaJI | CCNNGG | 2 cut(s) | 141, 207 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 45, 82 |
| BseDI | CCNNGG | 2 cut(s) | 141, 207 |
| BseGI | GGATG | 1 cut(s) | 111 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 45, 82 |
| BseMII | CTCAG | 1 cut(s) | 170 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BseYI | CCCAGC | 1 cut(s) | 95 |
| Bsh1285I | CGRYCG | 1 cut(s) | 217 |
| BshFI | GGCC | 1 cut(s) | 140 |
| BshNI | GGYRCC | 1 cut(s) | 172 |
| BsiEI | CGRYCG | 1 cut(s) | 217 |
| BsiSI | CCGG | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 45, 82 |
| BsnI | GGCC | 1 cut(s) | 140 |
| BspACI | CCGC | 1 cut(s) | 39 |
| BspANI | GGCC | 1 cut(s) | 140 |
| BspCNI | CTCAG | 1 cut(s) | 169 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BspT107I | GGYRCC | 1 cut(s) | 172 |
| BssECI | CCNNGG | 2 cut(s) | 141, 207 |
| BssT1I | CCWWGG | 2 cut(s) | 141, 207 |
| BstDEI | CTNAG | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 111 |
| BstMCI | CGRYCG | 1 cut(s) | 217 |
| BstSCI | CCNGG | 1 cut(s) | 44 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BsuRI | GGCC | 1 cut(s) | 140 |
| BtsCI | GGATG | 1 cut(s) | 111 |
| CviJI | RGCY | 3 cut(s) | 5, 95, 140 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 95, 140 |
| DdeI | CTNAG | 1 cut(s) | 156 |
| Eco130I | CCWWGG | 2 cut(s) | 141, 207 |
| EcoT14I | CCWWGG | 2 cut(s) | 141, 207 |
| ErhI | CCWWGG | 2 cut(s) | 141, 207 |
| FaiI | YATR | 2 cut(s) | 12, 52 |
| Fnu4HI | GCNGC | 2 cut(s) | 36, 39 |
| FokI | GGATG | 1 cut(s) | 98 |
| Fsp4HI | GCNGC | 2 cut(s) | 36, 39 |
| FspBI | CTAG | 1 cut(s) | 29 |
| GluI | GCNGC | 2 cut(s) | 36, 39 |
| GsaI | CCCAGC | 1 cut(s) | 99 |
| HaeIII | GGCC | 1 cut(s) | 140 |
| HapII | CCGG | 1 cut(s) | 45 |
| HinfI | GANTC | 2 cut(s) | 100, 194 |
| HpaII | CCGG | 1 cut(s) | 45 |
| HphI | GGTGA | 1 cut(s) | 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 2 cut(s) | 92, 159 |
| Hpy8I | GTNNAC | 1 cut(s) | 148 |
| HpyAV | CCTTC | 2 cut(s) | 76, 130 |
| HpyF3I | CTNAG | 1 cut(s) | 156 |
| LmnI | GCTCC | 1 cut(s) | 92 |
| LpnPI | CCDG | 2 cut(s) | 58, 81 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| LweI | GCATC | 2 cut(s) | 9, 150 |
| MaeI | CTAG | 1 cut(s) | 29 |
| MluCI | AATT | 2 cut(s) | 167, 179 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MnlI | CCTC | 1 cut(s) | 68 |
| MslI | CAYNNNNRTG | 1 cut(s) | 158 |
| MspI | CCGG | 1 cut(s) | 45 |
| MspR9I | CCNGG | 1 cut(s) | 46 |
| NciI | CCSGG | 1 cut(s) | 46 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| PfeI | GAWTC | 1 cut(s) | 100 |
| PkrI | GCNGC | 2 cut(s) | 37, 40 |
| PleI | GAGTC | 1 cut(s) | 188 |
| PpsI | GAGTC | 1 cut(s) | 188 |
| PspFI | CCCAGC | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| RseI | CAYNNNNRTG | 1 cut(s) | 158 |
| SatI | GCNGC | 2 cut(s) | 36, 39 |
| SchI | GAGTC | 1 cut(s) | 188 |
| ScrFI | CCNGG | 1 cut(s) | 46 |
| SetI | ASST | 3 cut(s) | 97, 147, 209 |
| SfaNI | GCATC | 2 cut(s) | 9, 150 |
| SgeI | CNNG | 9 cut(s) | 41, 57, 58, 71, 101, 108, 116, 128, 154 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 158 |
| Sse9I | AATT | 2 cut(s) | 167, 179 |
| SsiI | CCGC | 1 cut(s) | 39 |
| SspMI | CTAG | 1 cut(s) | 29 |
| StyD4I | CCNGG | 1 cut(s) | 44 |
| StyI | CCWWGG | 2 cut(s) | 141, 207 |
| TaqI | TCGA | 3 cut(s) | 17, 60, 103 |
| TaqII | GACCGA | 1 cut(s) | 203 |
| TasI | AATT | 2 cut(s) | 167, 179 |
| TauI | GCSGC | 1 cut(s) | 41 |
| TfiI | GAWTC | 1 cut(s) | 100 |
| TseI | GCWGC | 1 cut(s) | 35 |
| TspGWI | ACGGA | 1 cut(s) | 201 |
| XspI | CTAG | 1 cut(s) | 29 |