No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g32870 |
| malus_domestica | MD07G1298600.v1.1 |
| pyrus_communis | pycom07g27100 |
| rosa_chinensis | RchiOBHm_Chr1g0382821 |
| rosa_roxburghii | Rroxscaffold_4G00277870 |
| rosa_rugosa | Rorug01G0436500 |
| rosa_samantha | Rh1AG461500 Rh1BG418100 Rh1CG432000 Rh1DG450300 |
| rosa_wichuraiana | Rw1G041030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 190 |
| AciI | CCGC | 2 cut(s) | 44, 53 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 136 |
| AfaI | GTAC | 1 cut(s) | 13 |
| AgsI | TTSAA | 1 cut(s) | 134 |
| AoxI | GGCC | 2 cut(s) | 3, 46 |
| ApoI | RAATTY | 1 cut(s) | 136 |
| AspS9I | GGNCC | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 1 cut(s) | 175 |
| AsuII | TTCGAA | 2 cut(s) | 121, 219 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 1 cut(s) | 190 |
| BccI | CCATC | 1 cut(s) | 197 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| BmcAI | AGTACT | 1 cut(s) | 13 |
| BmgT120I | GGNCC | 1 cut(s) | 46 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmsI | GCATC | 1 cut(s) | 168 |
| Bpu14I | TTCGAA | 2 cut(s) | 121, 219 |
| BsaJI | CCNNGG | 2 cut(s) | 153, 225 |
| BseDI | CCNNGG | 2 cut(s) | 153, 225 |
| BseYI | CCCAGC | 2 cut(s) | 56, 62 |
| BshFI | GGCC | 2 cut(s) | 5, 48 |
| BshNI | GGYRCC | 1 cut(s) | 190 |
| BsnI | GGCC | 2 cut(s) | 5, 48 |
| Bsp119I | TTCGAA | 2 cut(s) | 121, 219 |
| BspACI | CCGC | 2 cut(s) | 44, 53 |
| BspANI | GGCC | 2 cut(s) | 5, 48 |
| BspHI | TCATGA | 1 cut(s) | 141 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BspT104I | TTCGAA | 2 cut(s) | 121, 219 |
| BspT107I | GGYRCC | 1 cut(s) | 190 |
| BssECI | CCNNGG | 2 cut(s) | 153, 225 |
| BssT1I | CCWWGG | 2 cut(s) | 153, 225 |
| BstBI | TTCGAA | 2 cut(s) | 121, 219 |
| BstC8I | GCNNGC | 1 cut(s) | 46 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 50, 59 |
| BsuRI | GGCC | 2 cut(s) | 5, 48 |
| BtsI | GCAGTG | 1 cut(s) | 26 |
| BtsIMutI | CAGTG | 1 cut(s) | 26 |
| Cac8I | GCNNGC | 1 cut(s) | 46 |
| CciI | TCATGA | 1 cut(s) | 141 |
| Cfr13I | GGNCC | 1 cut(s) | 46 |
| Csp6I | GTAC | 1 cut(s) | 12 |
| CviAII | CATG | 2 cut(s) | 7, 142 |
| CviJI | RGCY | 5 cut(s) | 5, 48, 56, 62, 152 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 48, 56, 62, 152 |
| CviQI | GTAC | 1 cut(s) | 12 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 2 cut(s) | 153, 225 |
| EcoT14I | CCWWGG | 2 cut(s) | 153, 225 |
| ErhI | CCWWGG | 2 cut(s) | 153, 225 |
| FaeI | CATG | 2 cut(s) | 10, 145 |
| FaiI | YATR | 3 cut(s) | 8, 23, 143 |
| FatI | CATG | 2 cut(s) | 6, 141 |
| FauI | CCCGC | 1 cut(s) | 37 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| GluI | GCNGC | 1 cut(s) | 54 |
| GsaI | CCCAGC | 2 cut(s) | 60, 66 |
| HaeIII | GGCC | 2 cut(s) | 5, 48 |
| Hin1II | CATG | 2 cut(s) | 10, 145 |
| HinfI | GANTC | 2 cut(s) | 118, 212 |
| HphI | GGTGA | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 1 cut(s) | 110 |
| Hpy188III | TCNNGA | 1 cut(s) | 142 |
| Hpy99I | CGWCG | 1 cut(s) | 41 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 50, 59 |
| Hsp92II | CATG | 2 cut(s) | 10, 145 |
| LpnPI | CCDG | 2 cut(s) | 42, 48 |
| LweI | GCATC | 1 cut(s) | 168 |
| MaeIII | GTNAC | 1 cut(s) | 24 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 136, 197 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 206 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| MnlI | CCTC | 3 cut(s) | 104, 154, 204 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 1 cut(s) | 176 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 50, 59 |
| NlaIII | CATG | 2 cut(s) | 10, 145 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| NmuCI | GTSAC | 1 cut(s) | 24 |
| NspV | TTCGAA | 2 cut(s) | 121, 219 |
| PagI | TCATGA | 1 cut(s) | 141 |
| PfeI | GAWTC | 1 cut(s) | 118 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| PleI | GAGTC | 1 cut(s) | 206 |
| PpsI | GAGTC | 1 cut(s) | 206 |
| PspFI | CCCAGC | 2 cut(s) | 56, 62 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| PspPI | GGNCC | 1 cut(s) | 46 |
| RsaI | GTAC | 1 cut(s) | 13 |
| RsaNI | GTAC | 1 cut(s) | 12 |
| RseI | CAYNNNNRTG | 1 cut(s) | 176 |
| SatI | GCNGC | 1 cut(s) | 54 |
| Sau96I | GGNCC | 1 cut(s) | 46 |
| ScaI | AGTACT | 1 cut(s) | 13 |
| SchI | GAGTC | 1 cut(s) | 206 |
| SetI | ASST | 5 cut(s) | 115, 159, 165, 196, 227 |
| SfaNI | GCATC | 1 cut(s) | 168 |
| SfuI | TTCGAA | 2 cut(s) | 121, 219 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 176 |
| Sse9I | AATT | 2 cut(s) | 136, 197 |
| SsiI | CCGC | 2 cut(s) | 44, 53 |
| StyI | CCWWGG | 2 cut(s) | 153, 225 |
| TaqI | TCGA | 2 cut(s) | 121, 219 |
| TasI | AATT | 2 cut(s) | 136, 197 |
| TatI | WGTACW | 1 cut(s) | 11 |
| TauI | GCSGC | 1 cut(s) | 56 |
| TfiI | GAWTC | 1 cut(s) | 118 |
| TscAI | CASTG | 1 cut(s) | 33 |
| TseFI | GTSAC | 1 cut(s) | 24 |
| Tsp45I | GTSAC | 1 cut(s) | 24 |
| TspDTI | ATGAA | 1 cut(s) | 130 |
| TspRI | CASTG | 1 cut(s) | 33 |
| XapI | RAATTY | 1 cut(s) | 136 |
| ZrmI | AGTACT | 1 cut(s) | 13 |