pycom08g04620
ERF Family

Transmembrane 9 superfamily member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
3489302 .. 3491640
2339 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g04620.6

Sequence Viewer

Length: 1116 bp
ATGGCATCTCATAGATCCCCGGCGGTCATGGCGATCTCTGCGATCTTCTTACTTCTCGTCCATGGCGCCCACTCCTTCTATCTCCCCGGCGTCGCTCCGGAGGACTTCATCAAGGGAGATGATTTGAAAGTTAAAGTGAACAAATTGACTTCTACAAAGACTCAGCTTCCGTACTCATATTACTCTCTCCCTTACTGCAAACCTGATAAAATTTTGGACAGTACAGAGAATCTTGGGGAAGTGCTCCGTGGTGACCGGATCGAGAACTCCCCCTATGTGTTTAAAATGCGGGAGCCTCAGATGTGCAACATTGTCTGCCGGTTAACACCTGATGCCAAAATTGTAAAGCAGTTTAAGGAGAAGATAGATGACGAGTATCGAGTGAACATGATCCTTGATAATCTACCTCTAGTCGTTCCCATTCAAAGGGCAGACCAAGAAGCTCCTACTGTTTATCAGCTTGGATTCCATGTTGGGCTCAAAGGCCATTATGCTGGGAGCAAAGAAGAGAAATACTTCATCCACAACCATCTGGCATTTACTGTGAAGTACCATAGAGATTCGCAAACTGAAACAGCAAGAATCGTGGGATTTGAGGTTAAACCATTCAGTGTTAAACATGAATATGAAGGGAAATGGAATGATGCAAAGACTCGTTTAACTACCTGTGACCCCCATTCGAAACACACTGTTGTTAATTCTAACTCTCCTCAAGAGGTTGCCGAAAAGCAAGAAATTGTGTTTACCTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCTAGATGGGATGCTTATCTACTGATGAGTGACGACCAAATCCATTGGTTTTCAATTGTCAACTCATTGATGATTGTCCTCTTCCTTTCGGGTATGGTAGCAATGATTATGCTAAGAACACTTTACCGTGATATCTCCAAGTATAATGAACTTGAGACCCAGGAAGAAGCGCAAGAAGAGACAGGATGGAAACTTGTCCACGGGGATGTTTTCAGGGCTCCAAATAACTCTGAATTGCTCTGTGTGTACGTTGGAACTGGCGTTCAGTTCTTCGGAATGATACTGGTGACGATCGATCTTTGCTGTCCTTGGCTTCCTCTCCCCATCTAA

Protein Analysis

372

Amino Acids

42.61

Weight (kDa)

5.82

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 65
AccIII TCCGGA 1 cut(s) 97
AciI CCGC 2 cut(s) 23, 289
AclWI GGATC 3 cut(s) 9, 266, 385
AcsI RAATTY 2 cut(s) 210, 758
AcyI GRCGYC 2 cut(s) 66, 90
AfaI GTAC 4 cut(s) 173, 223, 551, 1034
AfiI CCNNNNNNNGG 1 cut(s) 426
AgsI TTSAA 4 cut(s) 127, 425, 758, 840
AjnI CCWGG 2 cut(s) 762, 945
AloI GAACNNNNNNTCC 2 cut(s) 1032, 1064
AluBI AGCT 3 cut(s) 166, 443, 460
AluI AGCT 3 cut(s) 166, 443, 460
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 2 cut(s) 935, 959
AlwI GGATC 3 cut(s) 9, 266, 385
Aor13HI TCCGGA 1 cut(s) 97
AoxI GGCC 1 cut(s) 484
ApoI RAATTY 2 cut(s) 210, 758
Asp700I GAANNNNTTC 1 cut(s) 515
AspLEI GCGC 2 cut(s) 68, 958
AsuC2I CCSGG 2 cut(s) 20, 87
AsuHPI GGTGA 2 cut(s) 263, 1084
AsuII TTCGAA 1 cut(s) 680
BanI GGYRCC 1 cut(s) 65
BanII GRGCYC 2 cut(s) 480, 1006
Bbv12I GWGCWC 1 cut(s) 246
BccI CCATC 3 cut(s) 537, 786, 966
BciT130I CCWGG 2 cut(s) 764, 947
BcnI CCSGG 2 cut(s) 20, 87
BcoDI GTCTC 2 cut(s) 935, 959
BfaI CTAG 2 cut(s) 410, 789
BfoI RGCGCY 1 cut(s) 69
Bme1390I CCNGG 4 cut(s) 20, 87, 764, 947
BmiI GGNNCC 3 cut(s) 67, 294, 1005
BmrFI CCNGG 4 cut(s) 20, 87, 764, 947
BmsI GCATC 4 cut(s) 14, 322, 634, 787
Bpu14I TTCGAA 1 cut(s) 680
BpuEI CTTGAG 2 cut(s) 696, 959
BpuMI CCSGG 2 cut(s) 20, 87
Bsa29I ATCGAT 1 cut(s) 1080
BsaBI GATNNNNATC 1 cut(s) 801
BsaHI GRCGYC 2 cut(s) 66, 90
BsaI GGTCTC 1 cut(s) 935
BsaJI CCNNGG 7 cut(s) 18, 61, 85, 247, 945, 985, 1094
BsaWI WCCGGW 2 cut(s) 97, 255
Bsc4I CCNNNNNNNGG 1 cut(s) 426
Bse118I RCCGGY 1 cut(s) 318
Bse1I ACTGG 2 cut(s) 1048, 1074
Bse3DI GCAATG 1 cut(s) 894
Bse8I GATNNNNATC 1 cut(s) 801
BseAI TCCGGA 1 cut(s) 97
BseBI CCWGG 2 cut(s) 764, 947
BseCI ATCGAT 1 cut(s) 1080
BseDI CCNNGG 7 cut(s) 18, 61, 85, 247, 945, 985, 1094
BseGI GGATG 4 cut(s) 519, 802, 977, 997
BseJI GATNNNNATC 1 cut(s) 801
BseLI CCNNNNNNNGG 1 cut(s) 426
BseMI GCAATG 1 cut(s) 894
BseMII CTCAG 2 cut(s) 176, 311
BseNI ACTGG 2 cut(s) 1048, 1074
BseRI GAGGAG 1 cut(s) 699
BseYI CCCAGC 1 cut(s) 494
Bsh1285I CGRYCG 1 cut(s) 1080
BshFI GGCC 1 cut(s) 486
BshNI GGYRCC 1 cut(s) 65
BshVI ATCGAT 1 cut(s) 1080
BsiEI CGRYCG 1 cut(s) 1080
BsiHKAI GWGCWC 1 cut(s) 246
BsiSI CCGG 5 cut(s) 20, 87, 98, 256, 319
BslI CCNNNNNNNGG 1 cut(s) 426
BsmAI GTCTC 2 cut(s) 935, 959
BsnI GGCC 1 cut(s) 486
Bso31I GGTCTC 1 cut(s) 935
Bsp119I TTCGAA 1 cut(s) 680
Bsp1286I GDGCHC 3 cut(s) 246, 480, 1006
Bsp13I TCCGGA 1 cut(s) 97
Bsp143I GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
Bsp19I CCATGG 1 cut(s) 61
BspACI CCGC 2 cut(s) 23, 289
BspANI GGCC 1 cut(s) 486
BspCNI CTCAG 2 cut(s) 175, 310
BspDI ATCGAT 1 cut(s) 1080
BspEI TCCGGA 1 cut(s) 97
BspLI GGNNCC 3 cut(s) 67, 294, 1005
BspPI GGATC 3 cut(s) 9, 266, 385
BspT104I TTCGAA 1 cut(s) 680
BspT107I GGYRCC 1 cut(s) 65
BspTNI GGTCTC 1 cut(s) 935
BsrDI GCAATG 1 cut(s) 894
BsrFI RCCGGY 1 cut(s) 318
BsrI ACTGG 2 cut(s) 1048, 1074
BssAI RCCGGY 1 cut(s) 318
BssECI CCNNGG 7 cut(s) 18, 61, 85, 247, 945, 985, 1094
BssMI GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
BssNI GRCGYC 2 cut(s) 66, 90
BssT1I CCWWGG 2 cut(s) 61, 1094
Bst2UI CCWGG 2 cut(s) 764, 947
Bst4CI ACNGT 5 cut(s) 221, 451, 544, 691, 914
Bst6I CTCTTC 3 cut(s) 501, 872, 957
BstACI GRCGYC 2 cut(s) 66, 90
BstBI TTCGAA 1 cut(s) 680
BstDEI CTNAG 3 cut(s) 162, 297, 899
BstDSI CCRYGG 3 cut(s) 61, 247, 985
BstEII GGTNACC 1 cut(s) 251
BstF5I GGATG 4 cut(s) 519, 802, 977, 997
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 2 cut(s) 68, 958
BstKTI GATC 7 cut(s) 17, 36, 45, 261, 393, 1080, 1084
BstMAI GTCTC 2 cut(s) 935, 959
BstMBI GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
BstMCI CGRYCG 1 cut(s) 1080
BstMWI GCNNNNNNNGC 2 cut(s) 29, 38
BstNI CCWGG 2 cut(s) 764, 947
BstPI GGTNACC 1 cut(s) 251
BstSCI CCNGG 4 cut(s) 18, 85, 762, 945
BstX2I RGATCY 1 cut(s) 14
BstXI CCANNNNNNTGG 1 cut(s) 494
BstYI RGATCY 1 cut(s) 14
Bsu15I ATCGAT 1 cut(s) 1080
BsuRI GGCC 1 cut(s) 486
BsuTUI ATCGAT 1 cut(s) 1080
BtgI CCRYGG 3 cut(s) 61, 247, 985
BtsCI GGATG 4 cut(s) 519, 802, 977, 997
BtsIMutI CAGTG 2 cut(s) 616, 687
CfoI GCGC 2 cut(s) 68, 958
Cfr10I RCCGGY 1 cut(s) 318
ClaI ATCGAT 1 cut(s) 1080
CseI GACGC 1 cut(s) 79
Csp6I GTAC 4 cut(s) 172, 222, 550, 1033
CspCI CAANNNNNGTGG 2 cut(s) 567, 602
CviAII CATG 5 cut(s) 28, 62, 388, 470, 620
CviJI RGCY 9 cut(s) 166, 295, 443, 460, 478, 486, 785, 1004, 1099
CviKI_1 RGCY 9 cut(s) 166, 295, 443, 460, 478, 486, 785, 1004, 1099
CviQI GTAC 4 cut(s) 172, 222, 550, 1033
DdeI CTNAG 3 cut(s) 162, 297, 899
DinI GGCGCC 1 cut(s) 67
DpnI GATC 7 cut(s) 16, 35, 44, 260, 392, 1079, 1083
DpnII GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
DraI TTTAAA 1 cut(s) 283
Eam1104I CTCTTC 3 cut(s) 501, 872, 957
EarI CTCTTC 3 cut(s) 501, 872, 957
Eco130I CCWWGG 2 cut(s) 61, 1094
Eco24I GRGCYC 2 cut(s) 480, 1006
Eco31I GGTCTC 1 cut(s) 935
Eco32I GATATC 1 cut(s) 919
Eco91I GGTNACC 1 cut(s) 251
EcoO65I GGTNACC 1 cut(s) 251
EcoRI GAATTC 1 cut(s) 758
EcoRII CCWGG 2 cut(s) 762, 945
EcoRV GATATC 1 cut(s) 919
EcoT14I CCWWGG 2 cut(s) 61, 1094
EcoT38I GRGCYC 2 cut(s) 480, 1006
EgeI GGCGCC 1 cut(s) 67
EheI GGCGCC 1 cut(s) 67
ErhI CCWWGG 2 cut(s) 61, 1094
FaeI CATG 5 cut(s) 31, 65, 391, 473, 623
FatI CATG 5 cut(s) 27, 61, 387, 469, 619
FauI CCCGC 1 cut(s) 282
FokI GGATG 4 cut(s) 506, 809, 984, 1004
FriOI GRGCYC 2 cut(s) 480, 1006
FspBI CTAG 2 cut(s) 410, 789
GlaI GCGC 2 cut(s) 67, 957
GsaI CCCAGC 1 cut(s) 498
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 1 cut(s) 486
HapII CCGG 5 cut(s) 20, 87, 98, 256, 319
HgaI GACGC 1 cut(s) 79
HhaI GCGC 2 cut(s) 68, 958
Hin1I GRCGYC 2 cut(s) 66, 90
Hin1II CATG 5 cut(s) 31, 65, 391, 473, 623
Hin6I GCGC 2 cut(s) 66, 956
HinP1I GCGC 2 cut(s) 66, 956
HincII GTYRAC 2 cut(s) 324, 847
HindII GTYRAC 2 cut(s) 324, 847
HinfI GANTC 6 cut(s) 160, 229, 465, 560, 582, 652
HpaI GTTAAC 1 cut(s) 324
HpaII CCGG 5 cut(s) 20, 87, 98, 256, 319
HphI GGTGA 2 cut(s) 263, 1084
Hpy166II GTNNAC 7 cut(s) 139, 324, 385, 744, 847, 985, 1033
Hpy188I TCNGA 3 cut(s) 300, 1018, 1061
Hpy188III TCNNGA 4 cut(s) 98, 262, 713, 789
Hpy8I GTNNAC 7 cut(s) 139, 324, 385, 744, 847, 985, 1033
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 2 cut(s) 85, 623
HpyCH4III ACNGT 5 cut(s) 221, 451, 544, 691, 914
HpyCH4IV ACGT 1 cut(s) 1035
HpyCH4V TGCA 3 cut(s) 198, 306, 647
HpyF10VI GCNNNNNNNGC 2 cut(s) 29, 38
HpyF3I CTNAG 3 cut(s) 162, 297, 899
HpySE526I ACGT 1 cut(s) 1035
Hsp92I GRCGYC 2 cut(s) 66, 90
Hsp92II CATG 5 cut(s) 31, 65, 391, 473, 623
HspAI GCGC 2 cut(s) 66, 956
KasI GGCGCC 1 cut(s) 65
Kpn2I TCCGGA 1 cut(s) 97
KspAI GTTAAC 1 cut(s) 324
Kzo9I GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
LmnI GCTCC 6 cut(s) 100, 249, 292, 448, 498, 1009
LweI GCATC 4 cut(s) 14, 322, 634, 787
MaeI CTAG 2 cut(s) 410, 789
MaeII ACGT 1 cut(s) 1035
MaeIII GTNAC 4 cut(s) 251, 668, 815, 1072
MalI GATC 7 cut(s) 16, 35, 44, 260, 392, 1079, 1083
MboI GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
MboII GAAGA 7 cut(s) 37, 373, 518, 859, 962, 974, 1048
MfeI CAATTG 1 cut(s) 840
MflI RGATCY 1 cut(s) 14
MhlI GDGCHC 3 cut(s) 246, 480, 1006
MluCI AATT 8 cut(s) 143, 210, 339, 697, 735, 758, 840, 1019
Mly113I GGCGCC 1 cut(s) 66
MlyI GAGTC 2 cut(s) 154, 646
MmeI TCCRAC 1 cut(s) 1018
MnlI CCTC 8 cut(s) 94, 306, 417, 589, 709, 720, 875, 1113
MroI TCCGGA 1 cut(s) 97
MroXI GAANNNNTTC 1 cut(s) 515
MseI TTAA 8 cut(s) 132, 282, 323, 354, 600, 615, 659, 696
MslI CAYNNNNRTG 2 cut(s) 624, 990
MspI CCGG 5 cut(s) 20, 87, 98, 256, 319
MspR9I CCNGG 4 cut(s) 20, 87, 764, 947
MunI CAATTG 1 cut(s) 840
MvaI CCWGG 2 cut(s) 764, 947
MwoI GCNNNNNNNGC 2 cut(s) 29, 38
NarI GGCGCC 1 cut(s) 66
NciI CCSGG 2 cut(s) 20, 87
NcoI CCATGG 1 cut(s) 61
NdeII GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
NlaIII CATG 5 cut(s) 31, 65, 391, 473, 623
NlaIV GGNNCC 3 cut(s) 67, 294, 1005
NmuCI GTSAC 4 cut(s) 251, 668, 815, 1072
NspV TTCGAA 1 cut(s) 680
PdmI GAANNNNTTC 1 cut(s) 515
PfeI GAWTC 4 cut(s) 229, 465, 560, 582
PfoI TCCNGGA 1 cut(s) 762
Ple19I CGATCG 1 cut(s) 1080
PleI GAGTC 2 cut(s) 154, 646
PluTI GGCGCC 1 cut(s) 69
PpsI GAGTC 2 cut(s) 154, 646
Psp6I CCWGG 2 cut(s) 762, 945
PspEI GGTNACC 1 cut(s) 251
PspFI CCCAGC 1 cut(s) 494
PspGI CCWGG 2 cut(s) 762, 945
PspN4I GGNNCC 3 cut(s) 67, 294, 1005
PsuI RGATCY 1 cut(s) 14
PvuI CGATCG 1 cut(s) 1080
RsaI GTAC 4 cut(s) 173, 223, 551, 1034
RsaNI GTAC 4 cut(s) 172, 222, 550, 1033
RseI CAYNNNNRTG 2 cut(s) 624, 990
SaqAI TTAA 8 cut(s) 132, 282, 323, 354, 600, 615, 659, 696
Sau3AI GATC 7 cut(s) 14, 33, 42, 258, 390, 1077, 1081
SchI GAGTC 2 cut(s) 154, 646
ScrFI CCNGG 4 cut(s) 20, 87, 764, 947
SduI GDGCHC 3 cut(s) 246, 480, 1006
SfaNI GCATC 4 cut(s) 14, 322, 634, 787
SfoI GGCGCC 1 cut(s) 67
SfuI TTCGAA 1 cut(s) 680
SmiMI CAYNNNNRTG 2 cut(s) 624, 990
SmlI CTYRAG 2 cut(s) 711, 938
SmoI CTYRAG 2 cut(s) 711, 938
Sse9I AATT 8 cut(s) 143, 210, 339, 697, 735, 758, 840, 1019
SsiI CCGC 2 cut(s) 23, 289
SspDI GGCGCC 1 cut(s) 65
SspMI CTAG 2 cut(s) 410, 789
StyD4I CCNGG 4 cut(s) 18, 85, 762, 945
StyI CCWWGG 2 cut(s) 61, 1094
TaaI ACNGT 5 cut(s) 221, 451, 544, 691, 914
TaiI ACGT 1 cut(s) 1038
TaqI TCGA 4 cut(s) 261, 379, 680, 1080
TasI AATT 8 cut(s) 143, 210, 339, 697, 735, 758, 840, 1019
TatI WGTACW 1 cut(s) 221
TfiI GAWTC 4 cut(s) 229, 465, 560, 582
Tru1I TTAA 8 cut(s) 132, 282, 323, 354, 600, 615, 659, 696
Tru9I TTAA 8 cut(s) 132, 282, 323, 354, 600, 615, 659, 696
TscAI CASTG 2 cut(s) 616, 694
TseFI GTSAC 4 cut(s) 251, 668, 815, 1072
Tsp45I GTSAC 4 cut(s) 251, 668, 815, 1072
TspDTI ATGAA 5 cut(s) 97, 508, 636, 642, 948
TspGWI ACGGA 2 cut(s) 159, 236
TspRI CASTG 2 cut(s) 616, 694
XapI RAATTY 2 cut(s) 210, 758
XbaI TCTAGA 1 cut(s) 788
XmnI GAANNNNTTC 1 cut(s) 515
XspI CTAG 2 cut(s) 410, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.