pycom08g04880

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
3740913 .. 3743810
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g04880.1

Sequence Viewer

Length: 1476 bp
ATGGGCACAGAACATGACATTGGTGATTACTTAACCCTAGTTTCAATCAGCAAAACCGTGTCTGTACTCCCAAAAGTTTTGCACCCACCAAAACTTCTCACCCTCTCAAACTTGGACAGGCAAAGTCCAATCCATATGTACTTGGTTTTCTTTTACAATTCTAACTCTGTTGCTCATCACAAAATCAACAATTTGTCGCTTGATGGTGCTGATGATTTGGTTTTCGGAAGCTTGAAGTGTGGATTGGAAGAGACGCTATCGGTGTGGTACCCAGCTGCGGGGAGGTTGAGCTGTGATCACGAAAACAAGCTCAACTTATGGTGCAACAACAAAGGTGCTGTTCTAGTCGAGGCGGAGACGCCGGTTAAGATGTCGGAGCTTGGAGACCTATCACAGTGCAATGAATTTTTTGAGAAATTGGTTCACAAGCCTGTGTTTGATGAAGACTTCTCGGAGATGCCTTTGGTTGTTGCTCAGGTGACCAAGTTTGGTTGTGGAGGCTACTCAATAGGTATTGGTATTAGCCACTCGTTGTTCGACGGACCGGCGGCGTATGAATTTATGAGTGCATGGGCTTCTAATTCTACCATAACTATGAAACAATACAAGGTTTTGGAGATTCCTAAGTTACCAGTGCACGACAGAGGAACACTATTGATGGACGAGTTTGATGAAGCTCCAAAAGGGATTAGTACAGAGTTACTGCCGAACCGAAACGACGATGGTTCTGCCGTGGTGACAAGGGCTGCAGCCGTGGATCATTTATACCAATTGATCATGCAAGCAGCAGCATCCAATGACCGCATGATCAATTTCCTCAAAAATGGGTCCAATATTTTGAATCAAATTATTGATAGTAATTATGTTCATAAGACCTTTCATCTGAGTGGTGCACTGATTGAGAATTTGAAGAAAGAAGTCTGTGGTGATGAAATGAGTAGCTTTTCATGTTCATCCTTTGAAGTTGCGGCTGCTCACCTCTGGAAGACAAAGACCAAAGCTTTTGGAGTGAGGAAGGAAGCAATGGTGTGCCTGCAATTTTCCGTCGACGTAAGGAACAAGGTGGATCCCGCACTTCCCCAAGGTTTCAGTGGCAATGCATTCGTGCTGGCCTCCGTTGCCCTAACGGCGGCACAGGTGGAGGAAGCCACGCACAAAGCCATTATCGAGAAGATAAGAGAAGCCAAGAAGTCTGTCACCAGCTCCTACGTGAAGGCATACATGGAGGCAGTTGGTGGGCCACAGACTACTCTGCCTCCTCTCGACGAGCTCACTTTGGTGTCTGACTGGACCAGAATGCCCTTCCACAAAATAGGGTTTTTGCATGAATCAGCAGCATATGCGTCCCCGTTGGCCTCTTTGATCCCGCAGGTTGCGTATTTCATGCAAAACCCTAGTGATTGTAAGGGCATTGACATGAGAGTCGGATTGCTTCCGCAAAGCGTCAGCACTTTTTCTCGCTTGTTTCATCGCTAA

Protein Analysis

492

Amino Acids

54.09

Weight (kDa)

5.94

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 14 - 486 1.7e-56 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013385)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1421
Acc36I ACCTGC 1 cut(s) 1360
Acc65I GGTACC 1 cut(s) 267
AccB1I GGYRCC 1 cut(s) 267
AccI GTMKAC 1 cut(s) 1047
AciI CCGC 9 cut(s) 278, 353, 548, 802, 968, 1071, 1130, 1367, 1436
AclWI GGATC 4 cut(s) 765, 1061, 1074, 1357
AcsI RAATTY 3 cut(s) 404, 557, 904
AcyI GRCGYC 1 cut(s) 359
AfaI GTAC 4 cut(s) 66, 140, 269, 694
AfiI CCNNNNNNNGG 3 cut(s) 277, 278, 1129
AgsI TTSAA 5 cut(s) 45, 235, 841, 910, 962
AjuI GAANNNNNNNTTGG 3 cut(s) 35, 227, 259
AleI CACNNNNGTG 1 cut(s) 1277
Alw21I GWGCWC 3 cut(s) 639, 895, 1272
Alw26I GTCTC 3 cut(s) 245, 350, 378
Alw44I GTGCAC 2 cut(s) 635, 891
AlwI GGATC 4 cut(s) 765, 1061, 1074, 1357
AoxI GGCC 3 cut(s) 1110, 1238, 1353
ApaLI GTGCAC 2 cut(s) 635, 891
ApeKI GCWGC 7 cut(s) 275, 746, 749, 785, 788, 971, 1334
ApoI RAATTY 3 cut(s) 404, 557, 904
Asp718I GGTACC 1 cut(s) 267
AspS9I GGNCC 4 cut(s) 542, 828, 1238, 1290
AsuHPI GGTGA 7 cut(s) 35, 91, 490, 748, 938, 968, 1189
AvaII GGWCC 3 cut(s) 542, 828, 1290
BaeGI GKGCMC 3 cut(s) 8, 639, 895
BamHI GGATCC 1 cut(s) 1066
BanI GGYRCC 1 cut(s) 267
BanII GRGCYC 1 cut(s) 1272
BbsI GAAGAC 2 cut(s) 450, 992
Bbv12I GWGCWC 3 cut(s) 639, 895, 1272
BbvI GCAGC 7 cut(s) 262, 733, 761, 797, 800, 958, 1346
BccI CCATC 3 cut(s) 197, 652, 716
BceAI ACGGC 3 cut(s) 716, 737, 1143
BcgI CGANNNNNNTGC 4 cut(s) 710, 744, 1084, 1118
BclI TGATCA 3 cut(s) 295, 774, 807
BcoDI GTCTC 3 cut(s) 245, 350, 378
BfaI CTAG 3 cut(s) 38, 344, 1395
BfmI CTRYAG 1 cut(s) 747
BfuAI ACCTGC 1 cut(s) 1360
BglI GCCNNNNNGGC 1 cut(s) 1127
Bme18I GGWCC 3 cut(s) 542, 828, 1290
BmgT120I GGNCC 4 cut(s) 542, 828, 1238, 1290
BmiI GGNNCC 3 cut(s) 269, 829, 1068
BmsI GCATC 2 cut(s) 447, 800
BpiI GAAGAC 2 cut(s) 450, 992
Bpu10I CCTNAGC 1 cut(s) 474
BsaAI YACGTR 1 cut(s) 1210
BsaHI GRCGYC 1 cut(s) 359
BsaI GGTCTC 1 cut(s) 378
BsaJI CCNNGG 3 cut(s) 732, 753, 1081
BsaXI ACNNNNNCTCC 2 cut(s) 1240, 1270
Bsc4I CCNNNNNNNGG 3 cut(s) 277, 278, 1129
Bse118I RCCGGY 2 cut(s) 361, 544
Bse1I ACTGG 2 cut(s) 632, 1292
Bse3DI GCAATG 3 cut(s) 406, 1029, 1102
BseDI CCNNGG 3 cut(s) 732, 753, 1081
BseGI GGATG 2 cut(s) 791, 953
BseLI CCNNNNNNNGG 3 cut(s) 277, 278, 1129
BseMI GCAATG 3 cut(s) 406, 1029, 1102
BseMII CTCAG 2 cut(s) 488, 875
BseNI ACTGG 2 cut(s) 632, 1292
BseRI GAGGAG 1 cut(s) 1248
BseSI GKGCMC 3 cut(s) 8, 639, 895
BseXI GCAGC 7 cut(s) 262, 733, 761, 797, 800, 958, 1346
BseYI CCCAGC 1 cut(s) 271
BshFI GGCC 3 cut(s) 1112, 1240, 1355
BshNI GGYRCC 1 cut(s) 267
BsiHKAI GWGCWC 3 cut(s) 639, 895, 1272
BsiSI CCGG 2 cut(s) 362, 545
BslFI GGGAC 1 cut(s) 1330
BslI CCNNNNNNNGG 3 cut(s) 277, 278, 1129
BsmAI GTCTC 3 cut(s) 245, 350, 378
BsmBI CGTCTC 2 cut(s) 245, 350
BsmFI GGGAC 1 cut(s) 1330
BsmI GAATGC 2 cut(s) 1100, 1302
BsnI GGCC 3 cut(s) 1112, 1240, 1355
Bso31I GGTCTC 1 cut(s) 378
Bsp1286I GDGCHC 4 cut(s) 8, 639, 895, 1272
Bsp143I GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
BspACI CCGC 9 cut(s) 278, 353, 548, 802, 968, 1071, 1130, 1367, 1436
BspANI GGCC 3 cut(s) 1112, 1240, 1355
BspCNI CTCAG 2 cut(s) 487, 876
BspLI GGNNCC 3 cut(s) 269, 829, 1068
BspMAI CTGCAG 1 cut(s) 751
BspMI ACCTGC 1 cut(s) 1360
BspPI GGATC 4 cut(s) 765, 1061, 1074, 1357
BspT107I GGYRCC 1 cut(s) 267
BspTNI GGTCTC 1 cut(s) 378
BsrDI GCAATG 3 cut(s) 406, 1029, 1102
BsrFI RCCGGY 2 cut(s) 361, 544
BsrI ACTGG 2 cut(s) 632, 1292
BssAI RCCGGY 2 cut(s) 361, 544
BssECI CCNNGG 3 cut(s) 732, 753, 1081
BssMI GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
BssNI GRCGYC 1 cut(s) 359
BssT1I CCWWGG 1 cut(s) 1081
Bst4CI ACNGT 2 cut(s) 58, 396
Bst6I CTCTTC 1 cut(s) 243
BstACI GRCGYC 1 cut(s) 359
BstAPI GCANNNNNTGC 1 cut(s) 1340
BstBAI YACGTR 1 cut(s) 1210
BstC8I GCNNGC 3 cut(s) 783, 1034, 1110
BstDEI CTNAG 3 cut(s) 474, 624, 884
BstDSI CCRYGG 2 cut(s) 732, 753
BstEII GGTNACC 1 cut(s) 478
BstF5I GGATG 2 cut(s) 791, 953
BstKTI GATC 6 cut(s) 298, 760, 777, 810, 1069, 1365
BstMAI GTCTC 3 cut(s) 245, 350, 378
BstMBI GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
BstMWI GCNNNNNNNGC 3 cut(s) 1118, 1127, 1340
BstPI GGTNACC 1 cut(s) 478
BstSFI CTRYAG 1 cut(s) 747
BstSLI GKGCMC 3 cut(s) 8, 639, 895
BstV1I GCAGC 7 cut(s) 262, 733, 761, 797, 800, 958, 1346
BstV2I GAAGAC 2 cut(s) 450, 992
BstX2I RGATCY 1 cut(s) 1066
BstYI RGATCY 1 cut(s) 1066
BsuRI GGCC 3 cut(s) 1112, 1240, 1355
BtgI CCRYGG 2 cut(s) 732, 753
BtgZI GCGATG 1 cut(s) 1454
BtsCI GGATG 2 cut(s) 791, 953
BtsIMutI CAGTG 4 cut(s) 401, 639, 893, 1096
BveI ACCTGC 1 cut(s) 1360
Cac8I GCNNGC 3 cut(s) 783, 1034, 1110
Cfr10I RCCGGY 2 cut(s) 361, 544
Cfr13I GGNCC 4 cut(s) 542, 828, 1238, 1290
CpoI CGGWCCG 1 cut(s) 542
CseI GACGC 4 cut(s) 262, 367, 1332, 1432
Csp6I GTAC 4 cut(s) 65, 139, 268, 693
CspI CGGWCCG 1 cut(s) 542
CviAII CATG 9 cut(s) 14, 570, 778, 805, 948, 1222, 1325, 1384, 1417
CviQI GTAC 4 cut(s) 65, 139, 268, 693
DdeI CTNAG 3 cut(s) 474, 624, 884
DpnI GATC 6 cut(s) 297, 759, 776, 809, 1068, 1364
DpnII GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
DrdI GACNNNNNNGTC 1 cut(s) 1421
DseDI GACNNNNNNGTC 1 cut(s) 1421
Eam1104I CTCTTC 1 cut(s) 243
EarI CTCTTC 1 cut(s) 243
EciI GGCGGA 1 cut(s) 368
Ecl136II GAGCTC 1 cut(s) 1270
Eco130I CCWWGG 1 cut(s) 1081
Eco24I GRGCYC 1 cut(s) 1272
Eco31I GGTCTC 1 cut(s) 378
Eco47I GGWCC 3 cut(s) 542, 828, 1290
Eco53kI GAGCTC 1 cut(s) 1270
Eco91I GGTNACC 1 cut(s) 478
EcoICRI GAGCTC 1 cut(s) 1270
EcoO65I GGTNACC 1 cut(s) 478
EcoT14I CCWWGG 1 cut(s) 1081
EcoT22I ATGCAT 1 cut(s) 1102
EcoT38I GRGCYC 1 cut(s) 1272
ErhI CCWWGG 1 cut(s) 1081
Esp3I CGTCTC 2 cut(s) 245, 350
FaeI CATG 9 cut(s) 17, 573, 781, 808, 951, 1225, 1328, 1387, 1420
FalI AAGNNNNNCTT 2 cut(s) 299, 331
FaqI GGGAC 1 cut(s) 1330
FatI CATG 9 cut(s) 13, 569, 777, 804, 947, 1221, 1324, 1383, 1416
FauI CCCGC 3 cut(s) 271, 1078, 1374
FauNDI CATATG 2 cut(s) 135, 1339
FbaI TGATCA 3 cut(s) 295, 774, 807
FblI GTMKAC 1 cut(s) 1047
FokI GGATG 2 cut(s) 778, 940
FriOI GRGCYC 1 cut(s) 1272
FspBI CTAG 3 cut(s) 38, 344, 1395
GsaI CCCAGC 1 cut(s) 275
HaeIII GGCC 3 cut(s) 1112, 1240, 1355
HapII CCGG 2 cut(s) 362, 545
HgaI GACGC 4 cut(s) 262, 367, 1332, 1432
Hin1I GRCGYC 1 cut(s) 359
Hin1II CATG 9 cut(s) 17, 573, 781, 808, 951, 1225, 1328, 1387, 1420
HincII GTYRAC 1 cut(s) 1048
HindII GTYRAC 1 cut(s) 1048
HindIII AAGCTT 2 cut(s) 229, 999
HinfI GANTC 4 cut(s) 619, 841, 1328, 1422
HpaII CCGG 2 cut(s) 362, 545
HphI GGTGA 7 cut(s) 35, 91, 490, 748, 938, 968, 1189
Hpy166II GTNNAC 4 cut(s) 424, 637, 893, 1048
Hpy188I TCNGA 6 cut(s) 227, 376, 454, 885, 1285, 1427
Hpy188III TCNNGA 4 cut(s) 299, 982, 1168, 1262
Hpy8I GTNNAC 4 cut(s) 424, 637, 893, 1048
Hpy99I CGWCG 5 cut(s) 542, 722, 1049, 1052, 1268
HpyAV CCTTC 3 cut(s) 1009, 1207, 1312
HpyCH4III ACNGT 2 cut(s) 58, 396
HpyCH4IV ACGT 2 cut(s) 1050, 1209
HpyF10VI GCNNNNNNNGC 3 cut(s) 1118, 1127, 1340
HpyF3I CTNAG 3 cut(s) 474, 624, 884
HpySE526I ACGT 2 cut(s) 1050, 1209
Hsp92I GRCGYC 1 cut(s) 359
Hsp92II CATG 9 cut(s) 17, 573, 781, 808, 951, 1225, 1328, 1387, 1420
KpnI GGTACC 1 cut(s) 271
Ksp22I TGATCA 3 cut(s) 295, 774, 807
Kzo9I GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
LmnI GCTCC 3 cut(s) 376, 682, 1208
Lsp1109I GCAGC 7 cut(s) 262, 733, 761, 797, 800, 958, 1346
LweI GCATC 2 cut(s) 447, 800
MaeI CTAG 3 cut(s) 38, 344, 1395
MaeII ACGT 2 cut(s) 1050, 1209
MaeIII GTNAC 5 cut(s) 478, 627, 699, 736, 1195
MalI GATC 6 cut(s) 297, 759, 776, 809, 1068, 1364
MboI GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
MboII GAAGA 5 cut(s) 260, 455, 922, 997, 1183
MfeI CAATTG 1 cut(s) 770
MflI RGATCY 1 cut(s) 1066
MhlI GDGCHC 4 cut(s) 8, 639, 895, 1272
MlyI GAGTC 1 cut(s) 1431
MmeI TCCRAC 2 cut(s) 354, 1405
Mph1103I ATGCAT 1 cut(s) 1102
MseI TTAA 2 cut(s) 32, 366
MslI CAYNNNNRTG 4 cut(s) 593, 885, 1277, 1415
MspA1I CMGCKG 1 cut(s) 275
MspI CCGG 2 cut(s) 362, 545
MunI CAATTG 1 cut(s) 770
Mva1269I GAATGC 2 cut(s) 1100, 1302
MwoI GCNNNNNNNGC 3 cut(s) 1118, 1127, 1340
NdeI CATATG 2 cut(s) 135, 1339
NdeII GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
NlaIII CATG 9 cut(s) 17, 573, 781, 808, 951, 1225, 1328, 1387, 1420
NlaIV GGNNCC 3 cut(s) 269, 829, 1068
NmuCI GTSAC 3 cut(s) 478, 736, 1195
NsiI ATGCAT 1 cut(s) 1102
OliI CACNNNNGTG 1 cut(s) 1277
PctI GAATGC 2 cut(s) 1100, 1302
PfeI GAWTC 3 cut(s) 619, 841, 1328
PleI GAGTC 1 cut(s) 1430
PpsI GAGTC 1 cut(s) 1430
Ppu21I YACGTR 1 cut(s) 1210
Psp124BI GAGCTC 1 cut(s) 1272
PspEI GGTNACC 1 cut(s) 478
PspFI CCCAGC 1 cut(s) 271
PspN4I GGNNCC 3 cut(s) 269, 829, 1068
PspPI GGNCC 4 cut(s) 542, 828, 1238, 1290
PstI CTGCAG 1 cut(s) 751
PsuI RGATCY 1 cut(s) 1066
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 4 cut(s) 66, 140, 269, 694
RsaNI GTAC 4 cut(s) 65, 139, 268, 693
RseI CAYNNNNRTG 4 cut(s) 593, 885, 1277, 1415
Rsr2I CGGWCCG 1 cut(s) 542
RsrII CGGWCCG 1 cut(s) 542
SacI GAGCTC 1 cut(s) 1272
SalI GTCGAC 1 cut(s) 1046
SaqAI TTAA 2 cut(s) 32, 366
Sau3AI GATC 6 cut(s) 295, 757, 774, 807, 1066, 1362
Sau96I GGNCC 4 cut(s) 542, 828, 1238, 1290
SchI GAGTC 1 cut(s) 1431
SduI GDGCHC 4 cut(s) 8, 639, 895, 1272
SfaNI GCATC 2 cut(s) 447, 800
SfcI CTRYAG 1 cut(s) 747
SgrDI CGTCGACG 1 cut(s) 1046
SinI GGWCC 3 cut(s) 542, 828, 1290
SmiMI CAYNNNNRTG 4 cut(s) 593, 885, 1277, 1415
SsiI CCGC 9 cut(s) 278, 353, 548, 802, 968, 1071, 1130, 1367, 1436
SspI AATATT 1 cut(s) 835
SspMI CTAG 3 cut(s) 38, 344, 1395
SstI GAGCTC 1 cut(s) 1272
StyI CCWWGG 1 cut(s) 1081
TaaI ACNGT 2 cut(s) 58, 396
TaiI ACGT 2 cut(s) 1053, 1212
TaqI TCGA 5 cut(s) 348, 537, 1047, 1167, 1263
TatI WGTACW 3 cut(s) 64, 138, 692
TauI GCSGC 3 cut(s) 551, 971, 1133
TfiI GAWTC 3 cut(s) 619, 841, 1328
Tru1I TTAA 2 cut(s) 32, 366
Tru9I TTAA 2 cut(s) 32, 366
TscAI CASTG 4 cut(s) 401, 639, 900, 1096
TseFI GTSAC 3 cut(s) 478, 736, 1195
TseI GCWGC 7 cut(s) 275, 746, 749, 785, 788, 971, 1334
Tsp45I GTSAC 3 cut(s) 478, 736, 1195
TspGWI ACGGA 3 cut(s) 555, 1033, 1105
TspRI CASTG 4 cut(s) 401, 639, 900, 1096
VneI GTGCAC 2 cut(s) 635, 891
VpaK11BI GGWCC 3 cut(s) 542, 828, 1290
XapI RAATTY 3 cut(s) 404, 557, 904
XcmI CCANNNNNNNNNTGG 1 cut(s) 1088
XmiI GTMKAC 1 cut(s) 1047
XspI CTAG 3 cut(s) 38, 344, 1395
Zsp2I ATGCAT 1 cut(s) 1102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.