Rh6DG403600

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
59185471 .. 59187373
1903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG403600.1

Sequence Viewer

Length: 1578 bp
ATGGCCAGTAGTACTGAATTAGGTGATCATGATCATGATGAATACTTGATCAGTAAAGTTTCAATCACCGAAACCGTACTGGTGTCTTCTGCACCAGTTTTGCAGCAGCCTCCAAAAGTTGTCAGCCTCTCAAACTTGGACCGCCAGTGTCCACATCTTATGTACTTGGTTTTCTTTTACAAATATCCCACCACCTCCTCTGTTGATCATAATCGAATTTGGTCGCTTGATTCAGTTTTTCAAAGCTTGAAGTCAGGCTTGGAAGAGACTTTATCCATCTGGTACCCGGCGGGAGGTAGATTGATCATGACCAGCTCCACCGACGACGACAAAGTCCTTAGATCTAATGATGTTTATCATGAGACTAATAATTCTAAGCAGTCGCTTGGCGGTCTTAACTTGTTGTGCAACAACAAAGGTGCTGTTCTTGCCAAGGCAGCCACTGTGGTTAAGATATCAGAGCTTGGAGACCTCTCTCAATATAATGACTTCTTCGGAAACTTGGTTTACAAGCCTCCTCCTCCTGTGCTTGATGATCAACATGAAGATCATTTCTCTCAGATGCCTTTAGTTGCTGCTCAGGTGACCAAGTTTGGATGCGGAGGGTACTCAATTGGCATTGGCATCAGCCACTCGTTGTTTGATGGACCAGCTGCATATGAGTTTATGTGTGCATGGGCTTCTAATTCTGCTATCAAACCAAATAAAAACAAATTAGACGTCATAATGGATGATGAGCTGCAGCCTAAACCAGTAGTACTGGTGCACGATAGAGACGCACTGTTGATGATGGTTGACAATTATTCATGTCATGATGACGATAACGATGACGATGAAGGGGTTAGCTGTAGGGCTACTGCCATAGATCATTTATATCAACTGATAATGCAATCAGCAGCAGCAGTTGCATCCACTGATCTCCTGATCAAGAGTAGCAATGATGATGATAATTATGTTCACAAGACCTTTCATTTGAGCAGTGCATTCCTCAACTGTTTGAAGAAGCAGGTTGTTGGTGACAACTTTTCATGTTCCTCCTTTGAACTTGTAGCAGCTCACCTCTGGAAGGCGAAGACTTTGGCTTTAGGATTGAGCATGGAAACAATGGTGTGCTTGCAATTTGCTGTGGACGCGAGGAACAAGGTGGACCCTCCACTTCCTCAAGGTTTCACCGGCAACGCTTACGTCCTGGCCTCTGTTGCGCTCACTGCCTCACAGGTTGTTGACCAATCCGACCACAAAGCCATTGTTGACAAGATAAGAGAAGCCAAGAAGTCTGTGACAAACAAGTACGTTAAGTCGTACATGGAGGCGGTTGCAGGTGGTGGATCCCAGCAGACTTCTCTACCTCCTCTCAAGGAGCTCACCTTAGTGTCTGATTGGACCAGAATGCCCTTCCACAAGGTTGGCTTCTTACAAGGAGAAGCAGATTATGCTTCTCCGTTGGTCGCTCCAGTGACAGAGGTTATTTATTTCATGCAGAATCCAAAGGATGACAAGGGCATTGACATGAGAATTGGATTGCTTCCGCAATACCACGATGCCTTCACTCGCTATTTCCTCACCAATACCAACTGA

Protein Analysis

525

Amino Acids

57.92

Weight (kDa)

5.22

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 127 - 510 1.2e-46 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013385)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1310
AasI GACNNNNNNGTC 1 cut(s) 332
AatII GACGTC 1 cut(s) 723
Acc36I ACCTGC 2 cut(s) 997, 1310
Acc65I GGTACC 1 cut(s) 282
AccB1I GGYRCC 1 cut(s) 282
AccII CGCG 1 cut(s) 1133
AciI CCGC 6 cut(s) 142, 290, 390, 600, 1313, 1529
AclWI GGATC 2 cut(s) 1323, 1336
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 216
AcyI GRCGYC 1 cut(s) 720
AfaI GTAC 8 cut(s) 13, 78, 164, 284, 608, 759, 1292, 1304
AfiI CCNNNNNNNGG 2 cut(s) 293, 1066
AgsI TTSAA 5 cut(s) 63, 242, 250, 1000, 1043
AjnI CCWGG 1 cut(s) 1188
AjuI GAANNNNNNNTTGG 2 cut(s) 242, 274
AleI CACNNNNGTG 1 cut(s) 1370
AluBI AGCT 8 cut(s) 246, 315, 463, 653, 739, 846, 1055, 1363
AluI AGCT 8 cut(s) 246, 315, 463, 653, 739, 846, 1055, 1363
Alw21I GWGCWC 2 cut(s) 768, 1365
Alw26I GTCTC 4 cut(s) 260, 356, 462, 768
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 2 cut(s) 1323, 1336
AlwNI CAGNNNCTG 1 cut(s) 443
AoxI GGCC 2 cut(s) 3, 1191
ApaLI GTGCAC 1 cut(s) 764
ApoI RAATTY 1 cut(s) 216
ArsI GACNNNNNNTTYG 4 cut(s) 705, 737, 955, 987
Asp718I GGTACC 1 cut(s) 282
AspLEI GCGC 1 cut(s) 1204
AspS9I GGNCC 4 cut(s) 139, 647, 1147, 1383
AsuC2I CCSGG 1 cut(s) 287
AsuHPI GGTGA 8 cut(s) 35, 58, 595, 1028, 1049, 1162, 1357, 1555
AvaII GGWCC 4 cut(s) 139, 647, 1147, 1383
BaeGI GKGCMC 1 cut(s) 768
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1328
BanI GGYRCC 1 cut(s) 282
BanII GRGCYC 1 cut(s) 1365
BbsI GAAGAC 2 cut(s) 78, 1079
Bbv12I GWGCWC 2 cut(s) 768, 1365
BccI CCATC 3 cut(s) 284, 638, 784
BciT130I CCWGG 1 cut(s) 1190
BclI TGATCA 7 cut(s) 25, 31, 48, 205, 303, 535, 924
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 4 cut(s) 260, 356, 462, 768
BfmI CTRYAG 2 cut(s) 740, 847
BfuAI ACCTGC 2 cut(s) 997, 1310
BglII AGATCT 1 cut(s) 341
BmcAI AGTACT 2 cut(s) 13, 759
Bme1390I CCNGG 2 cut(s) 287, 1190
Bme18I GGWCC 4 cut(s) 139, 647, 1147, 1383
BmgT120I GGNCC 4 cut(s) 139, 647, 1147, 1383
BmiI GGNNCC 3 cut(s) 284, 1149, 1330
BmrFI CCNGG 2 cut(s) 287, 1190
BmsI GCATC 5 cut(s) 552, 587, 633, 917, 1531
BpiI GAAGAC 2 cut(s) 78, 1079
BpmI CTGGAG 1 cut(s) 1437
Bpu10I CCTNAGC 1 cut(s) 579
BpuEI CTTGAG 2 cut(s) 1146, 1340
BpuMI CCSGG 1 cut(s) 287
BsaBI GATNNNNATC 3 cut(s) 30, 210, 354
BsaHI GRCGYC 1 cut(s) 720
BsaI GGTCTC 1 cut(s) 462
BsaJI CCNNGG 1 cut(s) 432
Bsc4I CCNNNNNNNGG 2 cut(s) 293, 1066
Bse118I RCCGGY 1 cut(s) 1172
Bse1I ACTGG 7 cut(s) 6, 84, 95, 145, 752, 765, 1454
Bse3DI GCAATG 1 cut(s) 943
Bse8I GATNNNNATC 3 cut(s) 30, 210, 354
BseBI CCWGG 1 cut(s) 1190
BseDI CCNNGG 1 cut(s) 432
BseGI GGATG 4 cut(s) 602, 736, 908, 1498
BseJI GATNNNNATC 3 cut(s) 30, 210, 354
BseLI CCNNNNNNNGG 2 cut(s) 293, 1066
BseMI GCAATG 1 cut(s) 943
BseMII CTCAG 2 cut(s) 572, 593
BseNI ACTGG 7 cut(s) 6, 84, 95, 145, 752, 765, 1454
BseRI GAGGAG 4 cut(s) 187, 507, 510, 1341
BseSI GKGCMC 1 cut(s) 768
BseYI CCCAGC 1 cut(s) 1332
BsgI GTGCAG 1 cut(s) 75
Bsh1236I CGCG 1 cut(s) 1133
BshFI GGCC 2 cut(s) 5, 1193
BshNI GGYRCC 1 cut(s) 282
BsiHKAI GWGCWC 2 cut(s) 768, 1365
BsiSI CCGG 2 cut(s) 287, 1173
BslI CCNNNNNNNGG 2 cut(s) 293, 1066
BsmAI GTCTC 4 cut(s) 260, 356, 462, 768
BsmBI CGTCTC 1 cut(s) 768
BsmI GAATGC 2 cut(s) 983, 1395
BsnI GGCC 2 cut(s) 5, 1193
Bso31I GGTCTC 1 cut(s) 462
Bsp1286I GDGCHC 2 cut(s) 768, 1365
BspACI CCGC 6 cut(s) 142, 290, 390, 600, 1313, 1529
BspANI GGCC 2 cut(s) 5, 1193
BspCNI CTCAG 2 cut(s) 571, 592
BspFNI CGCG 1 cut(s) 1133
BspHI TCATGA 5 cut(s) 28, 34, 306, 358, 811
BspLI GGNNCC 3 cut(s) 284, 1149, 1330
BspMAI CTGCAG 1 cut(s) 744
BspMI ACCTGC 2 cut(s) 997, 1310
BspPI GGATC 2 cut(s) 1323, 1336
BspT107I GGYRCC 1 cut(s) 282
BspTNI GGTCTC 1 cut(s) 462
BsrDI GCAATG 1 cut(s) 943
BsrFI RCCGGY 1 cut(s) 1172
BsrI ACTGG 7 cut(s) 6, 84, 95, 145, 752, 765, 1454
BssAI RCCGGY 1 cut(s) 1172
BssECI CCNNGG 1 cut(s) 432
BssNI GRCGYC 1 cut(s) 720
BssT1I CCWWGG 1 cut(s) 432
Bst2UI CCWGG 1 cut(s) 1190
Bst4CI ACNGT 4 cut(s) 76, 445, 783, 995
Bst6I CTCTTC 1 cut(s) 258
BstACI GRCGYC 1 cut(s) 720
BstAPI GCANNNNNTGC 2 cut(s) 905, 1433
BstC8I GCNNGC 1 cut(s) 1115
BstDEI CTNAG 5 cut(s) 338, 375, 558, 579, 1369
BstEII GGTNACC 1 cut(s) 583
BstENI CCTNNNNNAGG 1 cut(s) 1064
BstF5I GGATG 4 cut(s) 602, 736, 908, 1498
BstFNI CGCG 1 cut(s) 1133
BstHHI GCGC 1 cut(s) 1204
BstMAI GTCTC 4 cut(s) 260, 356, 462, 768
BstMWI GCNNNNNNNGC 7 cut(s) 428, 437, 905, 1130, 1199, 1208, 1433
BstNI CCWGG 1 cut(s) 1190
BstPI GGTNACC 1 cut(s) 583
BstSCI CCNGG 2 cut(s) 285, 1188
BstSFI CTRYAG 2 cut(s) 740, 847
BstSLI GKGCMC 1 cut(s) 768
BstUI CGCG 1 cut(s) 1133
BstV2I GAAGAC 2 cut(s) 78, 1079
BstX2I RGATCY 2 cut(s) 341, 1328
BstXI CCANNNNNNTGG 1 cut(s) 1406
BstYI RGATCY 2 cut(s) 341, 1328
BsuRI GGCC 2 cut(s) 5, 1193
BtsCI GGATG 4 cut(s) 602, 736, 908, 1498
BtsI GCAGTG 2 cut(s) 985, 1206
BtsIMutI CAGTG 7 cut(s) 152, 441, 779, 912, 985, 1206, 1461
BveI ACCTGC 2 cut(s) 997, 1310
Cac8I GCNNGC 1 cut(s) 1115
CaiI CAGNNNCTG 1 cut(s) 443
CciI TCATGA 5 cut(s) 28, 34, 306, 358, 811
CfoI GCGC 1 cut(s) 1204
Cfr10I RCCGGY 1 cut(s) 1172
Cfr13I GGNCC 4 cut(s) 139, 647, 1147, 1383
CseI GACGC 2 cut(s) 785, 1139
Csp6I GTAC 8 cut(s) 12, 77, 163, 283, 607, 758, 1291, 1303
CviQI GTAC 8 cut(s) 12, 77, 163, 283, 607, 758, 1291, 1303
DdeI CTNAG 5 cut(s) 338, 375, 558, 579, 1369
DrdI GACNNNNNNGTC 1 cut(s) 332
DseDI GACNNNNNNGTC 1 cut(s) 332
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 258
EarI CTCTTC 1 cut(s) 258
Ecl136II GAGCTC 1 cut(s) 1363
Eco130I CCWWGG 1 cut(s) 432
Eco24I GRGCYC 1 cut(s) 1365
Eco31I GGTCTC 1 cut(s) 462
Eco32I GATATC 1 cut(s) 456
Eco47I GGWCC 4 cut(s) 139, 647, 1147, 1383
Eco53kI GAGCTC 1 cut(s) 1363
Eco91I GGTNACC 1 cut(s) 583
EcoICRI GAGCTC 1 cut(s) 1363
EcoNI CCTNNNNNAGG 1 cut(s) 1064
EcoO65I GGTNACC 1 cut(s) 583
EcoRII CCWGG 1 cut(s) 1188
EcoRV GATATC 1 cut(s) 456
EcoT14I CCWWGG 1 cut(s) 432
EcoT38I GRGCYC 1 cut(s) 1365
ErhI CCWWGG 1 cut(s) 432
Esp3I CGTCTC 1 cut(s) 768
FalI AAGNNNNNCTT 4 cut(s) 242, 274, 1394, 1426
FauI CCCGC 1 cut(s) 283
FauNDI CATATG 1 cut(s) 658
FbaI TGATCA 7 cut(s) 25, 31, 48, 205, 303, 535, 924
FokI GGATG 4 cut(s) 609, 743, 895, 1505
FriOI GRGCYC 1 cut(s) 1365
GlaI GCGC 1 cut(s) 1203
GsaI CCCAGC 1 cut(s) 1336
GsuI CTGGAG 1 cut(s) 1437
HaeIII GGCC 2 cut(s) 5, 1193
HapII CCGG 2 cut(s) 287, 1173
HgaI GACGC 2 cut(s) 785, 1139
HhaI GCGC 1 cut(s) 1204
Hin1I GRCGYC 1 cut(s) 720
Hin6I GCGC 1 cut(s) 1202
HinP1I GCGC 1 cut(s) 1202
HincII GTYRAC 3 cut(s) 796, 1225, 1252
HindII GTYRAC 3 cut(s) 796, 1225, 1252
HindIII AAGCTT 1 cut(s) 244
HinfI GANTC 2 cut(s) 230, 1483
HpaII CCGG 2 cut(s) 287, 1173
HphI GGTGA 8 cut(s) 35, 58, 595, 1028, 1049, 1162, 1357, 1555
Hpy166II GTNNAC 9 cut(s) 152, 508, 766, 796, 958, 1129, 1147, 1225, 1252
Hpy188I TCNGA 5 cut(s) 460, 497, 561, 1234, 1378
Hpy188III TCNNGA 8 cut(s) 29, 35, 307, 359, 812, 922, 928, 1063
Hpy8I GTNNAC 9 cut(s) 152, 508, 766, 796, 958, 1129, 1147, 1225, 1252
Hpy99I CGWCG 2 cut(s) 326, 329
HpyAV CCTTC 4 cut(s) 830, 1060, 1405, 1555
HpyCH4III ACNGT 4 cut(s) 76, 445, 783, 995
HpyCH4IV ACGT 3 cut(s) 720, 1185, 1293
HpyF10VI GCNNNNNNNGC 7 cut(s) 428, 437, 905, 1130, 1199, 1208, 1433
HpyF3I CTNAG 5 cut(s) 338, 375, 558, 579, 1369
HpySE526I ACGT 3 cut(s) 720, 1185, 1293
Hsp92I GRCGYC 1 cut(s) 720
HspAI GCGC 1 cut(s) 1202
KpnI GGTACC 1 cut(s) 286
Ksp22I TGATCA 7 cut(s) 25, 31, 48, 205, 303, 535, 924
LmnI GCTCC 3 cut(s) 320, 1360, 1456
LweI GCATC 5 cut(s) 552, 587, 633, 917, 1531
MaeII ACGT 3 cut(s) 720, 1185, 1293
MaeIII GTNAC 4 cut(s) 583, 1016, 1279, 1456
MboII GAAGA 6 cut(s) 78, 275, 484, 557, 1012, 1084
MfeI CAATTG 1 cut(s) 612
MflI RGATCY 2 cut(s) 341, 1328
MhlI GDGCHC 2 cut(s) 768, 1365
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 1257
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 396, 450, 1296
MslI CAYNNNNRTG 3 cut(s) 33, 1370, 1508
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 2 cut(s) 287, 1173
MspR9I CCNGG 2 cut(s) 287, 1190
MunI CAATTG 1 cut(s) 612
Mva1269I GAATGC 2 cut(s) 983, 1395
MvaI CCWGG 1 cut(s) 1190
MvnI CGCG 1 cut(s) 1133
MwoI GCNNNNNNNGC 7 cut(s) 428, 437, 905, 1130, 1199, 1208, 1433
NciI CCSGG 1 cut(s) 287
NdeI CATATG 1 cut(s) 658
NlaIV GGNNCC 3 cut(s) 284, 1149, 1330
NmuCI GTSAC 4 cut(s) 583, 1016, 1279, 1456
OliI CACNNNNGTG 1 cut(s) 1370
PagI TCATGA 5 cut(s) 28, 34, 306, 358, 811
PaqCI CACCTGC 1 cut(s) 1310
PctI GAATGC 2 cut(s) 983, 1395
PfeI GAWTC 2 cut(s) 230, 1483
PflFI GACNNNGTC 1 cut(s) 332
Psp124BI GAGCTC 1 cut(s) 1365
Psp6I CCWGG 1 cut(s) 1188
PspEI GGTNACC 1 cut(s) 583
PspFI CCCAGC 1 cut(s) 1332
PspGI CCWGG 1 cut(s) 1188
PspN4I GGNNCC 3 cut(s) 284, 1149, 1330
PspPI GGNCC 4 cut(s) 139, 647, 1147, 1383
PstI CTGCAG 1 cut(s) 744
PstNI CAGNNNCTG 1 cut(s) 443
PsuI RGATCY 2 cut(s) 341, 1328
PsyI GACNNNGTC 1 cut(s) 332
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 8 cut(s) 13, 78, 164, 284, 608, 759, 1292, 1304
RsaNI GTAC 8 cut(s) 12, 77, 163, 283, 607, 758, 1291, 1303
RseI CAYNNNNRTG 3 cut(s) 33, 1370, 1508
SacI GAGCTC 1 cut(s) 1365
SaqAI TTAA 3 cut(s) 396, 450, 1296
Sau96I GGNCC 4 cut(s) 139, 647, 1147, 1383
ScaI AGTACT 2 cut(s) 13, 759
ScrFI CCNGG 2 cut(s) 287, 1190
SduI GDGCHC 2 cut(s) 768, 1365
SfaNI GCATC 5 cut(s) 552, 587, 633, 917, 1531
SfcI CTRYAG 2 cut(s) 740, 847
SinI GGWCC 4 cut(s) 139, 647, 1147, 1383
SmiMI CAYNNNNRTG 3 cut(s) 33, 1370, 1508
SmlI CTYRAG 2 cut(s) 1161, 1355
SmoI CTYRAG 2 cut(s) 1161, 1355
SsiI CCGC 6 cut(s) 142, 290, 390, 600, 1313, 1529
SstI GAGCTC 1 cut(s) 1365
StyD4I CCNGG 2 cut(s) 285, 1188
StyI CCWWGG 1 cut(s) 432
TaaI ACNGT 4 cut(s) 76, 445, 783, 995
TaiI ACGT 3 cut(s) 723, 1188, 1296
TaqI TCGA 1 cut(s) 214
TatI WGTACW 3 cut(s) 11, 162, 757
TfiI GAWTC 2 cut(s) 230, 1483
Tru1I TTAA 3 cut(s) 396, 450, 1296
Tru9I TTAA 3 cut(s) 396, 450, 1296
TscAI CASTG 7 cut(s) 152, 448, 786, 919, 985, 1213, 1461
TseFI GTSAC 4 cut(s) 583, 1016, 1279, 1456
Tsp45I GTSAC 4 cut(s) 583, 1016, 1279, 1456
TspDTI ATGAA 7 cut(s) 54, 558, 795, 849, 959, 1017, 1465
TspGWI ACGGA 1 cut(s) 1431
TspRI CASTG 7 cut(s) 152, 448, 786, 919, 985, 1213, 1461
Tth111I GACNNNGTC 1 cut(s) 332
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 4 cut(s) 139, 647, 1147, 1383
XagI CCTNNNNNAGG 1 cut(s) 1064
XapI RAATTY 1 cut(s) 216
ZraI GACGTC 1 cut(s) 721
ZrmI AGTACT 2 cut(s) 13, 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.