RchiOBHm_Chr6g0299671

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
60723910 .. 60725864
1955 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26907

Sequence Viewer

Length: 1533 bp
ATGGCCAGTAGTACTGAATTAGGTGATCATGATCATGATGAATACTTGATCAGTAAAGTTTCAATCACCGAAACCGTACTGGTGTCTTCTGCACCAGTTTTGCAGCAGCCTCCAAAAGTTGTCAGCCTCTCAAACTTGGATCGCCAGTGTCCACTTCTTATGTACTTGGTTTTCTTTTACAAATATCCCACCACCTCCTCTGTTGATCATAATCGAATTTGGTCGCTTGATTCAGTTTTTCAAAGCTTGAAGTCAGGCTTGGAAGAGACTTTATCCATCTGGTACCCGGCGGGAGGTAGATTGATCATGACCAGCTCCACCGACGACGACAAATCGCTTGGCGGTCTTAACTTGTTGTGCAACAACAAAGGTGCTGTTCTTGCCAAGGCAGCCACTGTGGTTAAGATATCAGAGCTTGGAGACCTCTCTCAATACAATGACTTCTTCGGAAACTTGGTTTACAAGCCTCCTCCTCCTGTGCTTGATGAACAACATGAAGATCATTTCTCTCAGATGCCTTTAGTTGCTGCTCAGGTGACCAAGTTTGGATGCGGAGGCTACTCAATTGGCATTGGCATCAGCCACTCGTTGTTTGATGGACCAGCTGCATATGAGTTTATGTGTGCATGGGCTTCTAATTCTGCTATCAAACCAAATCAAAACAAATTAGACGTCATAATGGATGATGAGCTGCAGCCTAAACCAGTAGAACTAGTGCACGATAGAGACGCACTGTTGATGATGGTTGACAATTATTCATGTCATGATGACGATAACGATGACGATGAAGGGGTTAGCTGTAGGGCTGCTGCCATAGATCATTTATATCAACTGATAATGAAATCAGCAGCAGCAGTTGCATCCACTGATCTCCTGATGATCAAGAGTAGCAATGATGATAATAATTATGTTCACAAGACCTTTCATTTGAGCAGTGCATTCCTCAACTGTTTGAAGAAGCAGGTTGTTGGTGACAACTTTTCATGTTCCTCCTTTGAACTTGTAGCAGCTCACCTCTGGAAGGCGAAGACTTTGGCTTTAGGATTGACCATGGAAACAATGGTGTGCTTGCAATTTTCTGTGGACGCGAGGAACAAGGTGGACCCTCCACTTCCTCAAGGTTTCACCGGCAACGCTTACGTCCTGGCCTCTGTTGCGCTCACTGTCTCACAGGTTGTTGACCAATCCGACCACAAAGCCATTGTTGACAAGATAAGGGAAGCCAAGAAGTCTGTGACAAACAAGTACGTCAAGTCGTACATGGAGGCGGTTGCAGGTGGTGGATCCCAGCAGGCTTCTCTACCTCCTCTCAAGGAGCTCACCTTAGTGTCTGATTGGACCAGAATGCCCTTCCACAAGGTTGACTTCTTACAAGGAGAAGCAGATTATGCTTCTCCGTTGGTCGCACCAGTGCCAGAGGTTATTTATTTCATGCAGAATCCAAAGGATGACAAGGGCATTGACATGAGAATTGGATTGCTTCCGCAACACCTCGATGCCTTCACTCGCTATTTCCTCACCAATACCAACTGA

Protein Analysis

510

Amino Acids

56.19

Weight (kDa)

5.06

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 19 - 502 8.5e-56 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013385)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1265
AatII GACGTC 1 cut(s) 675
Acc36I ACCTGC 2 cut(s) 952, 1265
Acc65I GGTACC 1 cut(s) 282
AccB1I GGYRCC 1 cut(s) 282
AccII CGCG 1 cut(s) 1088
AciI CCGC 5 cut(s) 290, 342, 552, 1268, 1484
AclWI GGATC 3 cut(s) 147, 1278, 1291
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 216
AcyI GRCGYC 1 cut(s) 672
AfaI GTAC 6 cut(s) 13, 78, 164, 284, 1247, 1259
AfiI CCNNNNNNNGG 2 cut(s) 293, 1021
AgsI TTSAA 5 cut(s) 63, 242, 250, 955, 998
AhlI ACTAGT 1 cut(s) 712
AjnI CCWGG 1 cut(s) 1143
AjuI GAANNNNNNNTTGG 2 cut(s) 242, 274
AleI CACNNNNGTG 1 cut(s) 1325
AluBI AGCT 8 cut(s) 246, 315, 415, 605, 691, 798, 1010, 1318
AluI AGCT 8 cut(s) 246, 315, 415, 605, 691, 798, 1010, 1318
Alw21I GWGCWC 2 cut(s) 720, 1320
Alw26I GTCTC 4 cut(s) 260, 414, 720, 1171
Alw44I GTGCAC 1 cut(s) 716
AlwI GGATC 3 cut(s) 147, 1278, 1291
AlwNI CAGNNNCTG 1 cut(s) 395
AoxI GGCC 2 cut(s) 3, 1146
ApaLI GTGCAC 1 cut(s) 716
ApoI RAATTY 1 cut(s) 216
ArsI GACNNNNNNTTYG 4 cut(s) 657, 689, 910, 942
Asp718I GGTACC 1 cut(s) 282
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 3 cut(s) 599, 1102, 1338
AsuC2I CCSGG 1 cut(s) 287
AsuHPI GGTGA 8 cut(s) 35, 58, 547, 983, 1004, 1117, 1312, 1510
AvaII GGWCC 3 cut(s) 599, 1102, 1338
BaeGI GKGCMC 1 cut(s) 720
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1283
BanI GGYRCC 1 cut(s) 282
BanII GRGCYC 1 cut(s) 1320
BbsI GAAGAC 2 cut(s) 78, 1034
Bbv12I GWGCWC 2 cut(s) 720, 1320
BccI CCATC 3 cut(s) 284, 590, 736
BciT130I CCWGG 1 cut(s) 1145
BclI TGATCA 6 cut(s) 25, 31, 48, 205, 303, 879
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 4 cut(s) 260, 414, 720, 1171
BcuI ACTAGT 1 cut(s) 712
BfaI CTAG 1 cut(s) 713
BfmI CTRYAG 2 cut(s) 692, 799
BfuAI ACCTGC 2 cut(s) 952, 1265
BmcAI AGTACT 1 cut(s) 13
Bme1390I CCNGG 2 cut(s) 287, 1145
Bme18I GGWCC 3 cut(s) 599, 1102, 1338
BmgT120I GGNCC 3 cut(s) 599, 1102, 1338
BmiI GGNNCC 3 cut(s) 284, 1104, 1285
BmrFI CCNGG 2 cut(s) 287, 1145
BmsI GCATC 5 cut(s) 504, 539, 585, 869, 1486
BpiI GAAGAC 2 cut(s) 78, 1034
Bpu10I CCTNAGC 1 cut(s) 531
BpuEI CTTGAG 2 cut(s) 1101, 1295
BpuMI CCSGG 1 cut(s) 287
BsaBI GATNNNNATC 2 cut(s) 30, 210
BsaHI GRCGYC 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 414
BsaJI CCNNGG 2 cut(s) 384, 1050
Bsc4I CCNNNNNNNGG 2 cut(s) 293, 1021
Bse118I RCCGGY 1 cut(s) 1127
Bse1I ACTGG 6 cut(s) 6, 84, 95, 145, 704, 1409
Bse3DI GCAATG 1 cut(s) 898
Bse8I GATNNNNATC 2 cut(s) 30, 210
BseBI CCWGG 1 cut(s) 1145
BseDI CCNNGG 2 cut(s) 384, 1050
BseGI GGATG 4 cut(s) 554, 688, 860, 1453
BseJI GATNNNNATC 2 cut(s) 30, 210
BseLI CCNNNNNNNGG 2 cut(s) 293, 1021
BseMI GCAATG 1 cut(s) 898
BseMII CTCAG 2 cut(s) 524, 545
BseNI ACTGG 6 cut(s) 6, 84, 95, 145, 704, 1409
BseRI GAGGAG 4 cut(s) 187, 459, 462, 1296
BseSI GKGCMC 1 cut(s) 720
BseYI CCCAGC 1 cut(s) 1287
BsgI GTGCAG 1 cut(s) 75
Bsh1236I CGCG 1 cut(s) 1088
BshFI GGCC 2 cut(s) 5, 1148
BshNI GGYRCC 1 cut(s) 282
BsiHKAI GWGCWC 2 cut(s) 720, 1320
BsiSI CCGG 2 cut(s) 287, 1128
BslI CCNNNNNNNGG 2 cut(s) 293, 1021
BsmAI GTCTC 4 cut(s) 260, 414, 720, 1171
BsmBI CGTCTC 1 cut(s) 720
BsmI GAATGC 2 cut(s) 938, 1350
BsnI GGCC 2 cut(s) 5, 1148
Bso31I GGTCTC 1 cut(s) 414
Bsp1286I GDGCHC 2 cut(s) 720, 1320
Bsp19I CCATGG 1 cut(s) 1050
BspACI CCGC 5 cut(s) 290, 342, 552, 1268, 1484
BspANI GGCC 2 cut(s) 5, 1148
BspCNI CTCAG 2 cut(s) 523, 544
BspFNI CGCG 1 cut(s) 1088
BspHI TCATGA 4 cut(s) 28, 34, 306, 763
BspLI GGNNCC 3 cut(s) 284, 1104, 1285
BspMAI CTGCAG 1 cut(s) 696
BspMI ACCTGC 2 cut(s) 952, 1265
BspPI GGATC 3 cut(s) 147, 1278, 1291
BspT107I GGYRCC 1 cut(s) 282
BspTNI GGTCTC 1 cut(s) 414
BsrDI GCAATG 1 cut(s) 898
BsrFI RCCGGY 1 cut(s) 1127
BsrI ACTGG 6 cut(s) 6, 84, 95, 145, 704, 1409
BssAI RCCGGY 1 cut(s) 1127
BssECI CCNNGG 2 cut(s) 384, 1050
BssNI GRCGYC 1 cut(s) 672
BssT1I CCWWGG 2 cut(s) 384, 1050
Bst2UI CCWGG 1 cut(s) 1145
Bst4CI ACNGT 5 cut(s) 76, 397, 735, 950, 1165
Bst6I CTCTTC 1 cut(s) 258
BstACI GRCGYC 1 cut(s) 672
BstAPI GCANNNNNTGC 2 cut(s) 857, 1388
BstC8I GCNNGC 2 cut(s) 1070, 1293
BstDEI CTNAG 3 cut(s) 510, 531, 1324
BstDSI CCRYGG 1 cut(s) 1050
BstEII GGTNACC 1 cut(s) 535
BstENI CCTNNNNNAGG 1 cut(s) 1019
BstF5I GGATG 4 cut(s) 554, 688, 860, 1453
BstFNI CGCG 1 cut(s) 1088
BstHHI GCGC 1 cut(s) 1159
BstMAI GTCTC 4 cut(s) 260, 414, 720, 1171
BstMWI GCNNNNNNNGC 5 cut(s) 380, 389, 857, 1154, 1388
BstNI CCWGG 1 cut(s) 1145
BstPI GGTNACC 1 cut(s) 535
BstSCI CCNGG 2 cut(s) 285, 1143
BstSFI CTRYAG 2 cut(s) 692, 799
BstSLI GKGCMC 1 cut(s) 720
BstUI CGCG 1 cut(s) 1088
BstV2I GAAGAC 2 cut(s) 78, 1034
BstX2I RGATCY 1 cut(s) 1283
BstYI RGATCY 1 cut(s) 1283
BsuRI GGCC 2 cut(s) 5, 1148
BtgI CCRYGG 1 cut(s) 1050
BtsCI GGATG 4 cut(s) 554, 688, 860, 1453
BtsI GCAGTG 1 cut(s) 940
BtsIMutI CAGTG 7 cut(s) 152, 393, 731, 864, 940, 1161, 1416
BveI ACCTGC 2 cut(s) 952, 1265
Cac8I GCNNGC 2 cut(s) 1070, 1293
CaiI CAGNNNCTG 1 cut(s) 395
CciI TCATGA 4 cut(s) 28, 34, 306, 763
CfoI GCGC 1 cut(s) 1159
Cfr10I RCCGGY 1 cut(s) 1127
Cfr13I GGNCC 3 cut(s) 599, 1102, 1338
CseI GACGC 2 cut(s) 737, 1094
Csp6I GTAC 6 cut(s) 12, 77, 163, 283, 1246, 1258
CviQI GTAC 6 cut(s) 12, 77, 163, 283, 1246, 1258
DdeI CTNAG 3 cut(s) 510, 531, 1324
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 258
EarI CTCTTC 1 cut(s) 258
Ecl136II GAGCTC 1 cut(s) 1318
Eco130I CCWWGG 2 cut(s) 384, 1050
Eco24I GRGCYC 1 cut(s) 1320
Eco31I GGTCTC 1 cut(s) 414
Eco32I GATATC 1 cut(s) 408
Eco47I GGWCC 3 cut(s) 599, 1102, 1338
Eco53kI GAGCTC 1 cut(s) 1318
Eco91I GGTNACC 1 cut(s) 535
EcoICRI GAGCTC 1 cut(s) 1318
EcoNI CCTNNNNNAGG 1 cut(s) 1019
EcoO65I GGTNACC 1 cut(s) 535
EcoRII CCWGG 1 cut(s) 1143
EcoRV GATATC 1 cut(s) 408
EcoT14I CCWWGG 2 cut(s) 384, 1050
EcoT38I GRGCYC 1 cut(s) 1320
ErhI CCWWGG 2 cut(s) 384, 1050
Esp3I CGTCTC 1 cut(s) 720
FalI AAGNNNNNCTT 4 cut(s) 242, 274, 1349, 1381
FauI CCCGC 1 cut(s) 283
FauNDI CATATG 1 cut(s) 610
FbaI TGATCA 6 cut(s) 25, 31, 48, 205, 303, 879
FokI GGATG 4 cut(s) 561, 695, 847, 1460
FriOI GRGCYC 1 cut(s) 1320
FspBI CTAG 1 cut(s) 713
GlaI GCGC 1 cut(s) 1158
GsaI CCCAGC 1 cut(s) 1291
HaeIII GGCC 2 cut(s) 5, 1148
HapII CCGG 2 cut(s) 287, 1128
HgaI GACGC 2 cut(s) 737, 1094
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 1 cut(s) 672
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 4 cut(s) 748, 1180, 1207, 1363
HindII GTYRAC 4 cut(s) 748, 1180, 1207, 1363
HindIII AAGCTT 1 cut(s) 244
HinfI GANTC 2 cut(s) 230, 1438
HpaII CCGG 2 cut(s) 287, 1128
HphI GGTGA 8 cut(s) 35, 58, 547, 983, 1004, 1117, 1312, 1510
Hpy188I TCNGA 5 cut(s) 412, 449, 513, 1189, 1333
Hpy188III TCNNGA 7 cut(s) 29, 35, 307, 764, 874, 883, 1018
Hpy99I CGWCG 2 cut(s) 326, 329
HpyAV CCTTC 4 cut(s) 782, 1015, 1360, 1510
HpyCH4III ACNGT 5 cut(s) 76, 397, 735, 950, 1165
HpyCH4IV ACGT 3 cut(s) 672, 1140, 1248
HpyF10VI GCNNNNNNNGC 5 cut(s) 380, 389, 857, 1154, 1388
HpyF3I CTNAG 3 cut(s) 510, 531, 1324
HpySE526I ACGT 3 cut(s) 672, 1140, 1248
Hsp92I GRCGYC 1 cut(s) 672
HspAI GCGC 1 cut(s) 1157
KpnI GGTACC 1 cut(s) 286
Ksp22I TGATCA 6 cut(s) 25, 31, 48, 205, 303, 879
LmnI GCTCC 2 cut(s) 320, 1315
LweI GCATC 5 cut(s) 504, 539, 585, 869, 1486
MaeI CTAG 1 cut(s) 713
MaeII ACGT 3 cut(s) 672, 1140, 1248
MaeIII GTNAC 3 cut(s) 535, 971, 1234
MboII GAAGA 6 cut(s) 78, 275, 436, 509, 967, 1039
MfeI CAATTG 1 cut(s) 564
MflI RGATCY 1 cut(s) 1283
MhlI GDGCHC 2 cut(s) 720, 1320
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 17, 216, 564, 637, 665, 751, 904, 1073, 1470
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 1212
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 348, 402
MslI CAYNNNNRTG 4 cut(s) 33, 1325, 1463, 1494
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 605
MspI CCGG 2 cut(s) 287, 1128
MspR9I CCNGG 2 cut(s) 287, 1145
MunI CAATTG 1 cut(s) 564
Mva1269I GAATGC 2 cut(s) 938, 1350
MvaI CCWGG 1 cut(s) 1145
MvnI CGCG 1 cut(s) 1088
MwoI GCNNNNNNNGC 5 cut(s) 380, 389, 857, 1154, 1388
NciI CCSGG 1 cut(s) 287
NcoI CCATGG 1 cut(s) 1050
NdeI CATATG 1 cut(s) 610
NlaIV GGNNCC 3 cut(s) 284, 1104, 1285
NmuCI GTSAC 3 cut(s) 535, 971, 1234
OliI CACNNNNGTG 1 cut(s) 1325
PagI TCATGA 4 cut(s) 28, 34, 306, 763
PaqCI CACCTGC 1 cut(s) 1265
PctI GAATGC 2 cut(s) 938, 1350
PfeI GAWTC 2 cut(s) 230, 1438
Psp124BI GAGCTC 1 cut(s) 1320
Psp6I CCWGG 1 cut(s) 1143
PspEI GGTNACC 1 cut(s) 535
PspFI CCCAGC 1 cut(s) 1287
PspGI CCWGG 1 cut(s) 1143
PspN4I GGNNCC 3 cut(s) 284, 1104, 1285
PspPI GGNCC 3 cut(s) 599, 1102, 1338
PstI CTGCAG 1 cut(s) 696
PstNI CAGNNNCTG 1 cut(s) 395
PsuI RGATCY 1 cut(s) 1283
PvuII CAGCTG 1 cut(s) 605
RsaI GTAC 6 cut(s) 13, 78, 164, 284, 1247, 1259
RsaNI GTAC 6 cut(s) 12, 77, 163, 283, 1246, 1258
RseI CAYNNNNRTG 4 cut(s) 33, 1325, 1463, 1494
SacI GAGCTC 1 cut(s) 1320
SaqAI TTAA 2 cut(s) 348, 402
Sau96I GGNCC 3 cut(s) 599, 1102, 1338
ScaI AGTACT 1 cut(s) 13
ScrFI CCNGG 2 cut(s) 287, 1145
SduI GDGCHC 2 cut(s) 720, 1320
SfaNI GCATC 5 cut(s) 504, 539, 585, 869, 1486
SfcI CTRYAG 2 cut(s) 692, 799
SinI GGWCC 3 cut(s) 599, 1102, 1338
SmiMI CAYNNNNRTG 4 cut(s) 33, 1325, 1463, 1494
SmlI CTYRAG 2 cut(s) 1116, 1310
SmoI CTYRAG 2 cut(s) 1116, 1310
SpeI ACTAGT 1 cut(s) 712
Sse9I AATT 9 cut(s) 17, 216, 564, 637, 665, 751, 904, 1073, 1470
SsiI CCGC 5 cut(s) 290, 342, 552, 1268, 1484
SspMI CTAG 1 cut(s) 713
SstI GAGCTC 1 cut(s) 1320
StyD4I CCNGG 2 cut(s) 285, 1143
StyI CCWWGG 2 cut(s) 384, 1050
TaaI ACNGT 5 cut(s) 76, 397, 735, 950, 1165
TaiI ACGT 3 cut(s) 675, 1143, 1251
TaqI TCGA 2 cut(s) 214, 1494
TasI AATT 9 cut(s) 17, 216, 564, 637, 665, 751, 904, 1073, 1470
TatI WGTACW 2 cut(s) 11, 162
TfiI GAWTC 2 cut(s) 230, 1438
Tru1I TTAA 2 cut(s) 348, 402
Tru9I TTAA 2 cut(s) 348, 402
TscAI CASTG 7 cut(s) 152, 400, 738, 871, 940, 1168, 1416
TseFI GTSAC 3 cut(s) 535, 971, 1234
Tsp45I GTSAC 3 cut(s) 535, 971, 1234
TspDTI ATGAA 9 cut(s) 54, 501, 510, 747, 801, 854, 914, 972, 1420
TspGWI ACGGA 1 cut(s) 1386
TspRI CASTG 7 cut(s) 152, 400, 738, 871, 940, 1168, 1416
VneI GTGCAC 1 cut(s) 716
VpaK11BI GGWCC 3 cut(s) 599, 1102, 1338
XagI CCTNNNNNAGG 1 cut(s) 1019
XapI RAATTY 1 cut(s) 216
XcmI CCANNNNNNNNNTGG 1 cut(s) 1057
XspI CTAG 1 cut(s) 713
ZraI GACGTC 1 cut(s) 673
ZrmI AGTACT 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.