Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006486

Physical Location & Seq

Genomic Coordinates Forward (+)

44243012 .. 44246179

Gene Structure 3168 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0291500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGAGGCGGCGGTCGCCGACGAACTTCCCGTCGGAGCAAATGGAGAAGGGGACGGGGAAGAATCAGAATAGCAAGATTTGTTTCTTGGCGTCATTGTCGGTTTTCTTCTGGATGCTCTTGTTGTATTTTCATTTTATTGTGCTGGGTGGTAGCACTGTGGAGCAAGCTGTCAAATTACAGAATGGTCCTATGTATTCCGAGTTGCAGCCTGTCCTTGTGACCAGTCCTCCTCGGGTGGAGAATCTAAACGCCGAATCGGAGCATCCCCCTGTGACTTATCCTCCCCCATACACTGAACCGAAGCCTACTCCTGTGACCAGTGATCCTGAGATGGAGAAGCTAAACACTGAATCAAAGCCCGCCATTGTACCTGTTACTCGTAAAATTGGGCCCCCTTCGGAGACAACTCAGAGTCGAGAGGCTGAGAAGTATCCGTTTATGAGGGCGCTGAGAACCGTGGAGAACAAGAGTGATCCGTGTGGCGGGAGGTACATTTATGTTCATGACCTTCCGCCGAGGTTTAATGAGGATATGCTCAAGGAGTGTAGGAGTTTGAGCCTGTGGACTAATATGTGTAAGTTCACAACCAATGCTGGCCTTGGTCCTCCGCTTGAGAATGTTGAGGGGGTGTTTGAGAATACGAGCTGGTATGCGACGAACCAGTTTGCTGTGGATGTCATATTCAGCAATCGGATGAAGCAATATGAGTGCTTGACAAATGACTCATCTCTGGCGGCGGCTGTCTTTGTTCCCTTTTATGCTGGCTTTGATATTGCCCGGTATCTTTGGGGTGGATTCAATATATCAAGGAGGGATGCAGCTTCACTGGATCTGGTTGATTGGCTTATGAAGAGGCCAGAATGGAGCGTTATGGGTGGCAAAGATCATTTTCTTGTTGCAGGCAGGATTACATGGGATTTCCGGAGACTTACAGAAAATGAAGAGGATTGGGGCAATAAGCTTCTCTTTTTGCCGGCTGCTAAAAATATGTCAATGCTTGTGGTGGAATCAAGCCCATGGAATGCCAATGATTTTGGTATTCCGTATCCCACATACTTCCATCCAGCAAAGGATGCTGATGTATTAATTTGGCAGGACCGCATGAGAAACTTAGAGCGTAAATGGCTCTTCTCATTTGCTGGTGCCCCACGTCCTGGCAATGCCAAGTCGATTAGAGGGCAGATTATTGATCAATGCAAGAGCTCAAAGGTTGGTAAGCTGTTGGAATGTGATTTTGGTGAAAGCAAGTGTCATTCGCCAAGCAGTATCATGCAGATGTTTCAGAGCTCCCTTTTCTGCCTGCAACCTCAGGGTGATTCATACACACGAAGATCTGCTTTTGATTCGATGTTGGCTGGTTGCATACCTGTCTTCTTCCATCCGGGGTCAGCATACGCGCAATATACTTGGCATCTTCCAAGAGATTATACAACATATTCAGTGTTCATCCCGGAGAATGATATTCGTAAGAAGAATATTAGCATAGAGGAAAGGCTTAGTCAAATTCCTCCTGAGAAGGTCAAGGCCATGAGGGAGGAAGTTATAAACCTTATTCCTAGGCTGGTATATGCGGATCCCCGCTCTAAGTTGGAGACTTTCAAAGATGCATTTGATGTTTCTGTACAAGCAATAATCGACAAGGTTACAAGGGCAAGGAGGGACATGGTTGAAGGCCGTACAGATGATAACTTTATTGAGGAGATTAGTTGGAAGTATGCTTTGTTGGAGGAGGGACAGCGTGAGGTTGGACCTCATGAATGGGATCCTTTCTTTGCAAAGCAGAAGGATGGCAATGGTGATTCTGGTGAAGCTGCAAAAAATTCTTGGGAGAATGAACAGCGACAACACTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0001101 GO:0001558 GO:0003674 GO:0003824 GO:0003996 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005975 GO:0005976 GO:0006629 GO:0006694 GO:0006725 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009059 GO:0009664 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009741 GO:0009832 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0010345 GO:0010383 GO:0010393 GO:0010817 GO:0012505 GO:0014070 GO:0016043 GO:0016051 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016405 GO:0016740 GO:0016746 GO:0016747 GO:0016874 GO:0016877 GO:0016878 GO:0017144 GO:0019438 GO:0019748 GO:0032502 GO:0033692 GO:0033993 GO:0034637 GO:0034645 GO:0040008 GO:0042221 GO:0042445 GO:0042446 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045229 GO:0045488 GO:0045489 GO:0048856 GO:0050734 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0052325 GO:0052546 GO:0065007 GO:0065008 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0097305 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00073 map00073

Pfam Domains

Protein Families

Transferase

Protein Analysis

617

Amino Acids

70.6

Weight (kDa)

6.04

Isoelectric Point (pI)

50.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	160 - 498	8.1e-88	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25180 AT4G31920
fragaria_vesca	FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890
malus_domestica	MD08G1059000.v1.1 MD15G1037400.v1.1
prunus_persica	Prupe.1G391400_v2.0.a1 Prupe.1G391400_v2.0.a1
pyrus_communis	pycom08g04890 pycom15g03450 pycom15g03460
rosa_chinensis	RchiOBHm_Chr6g0299681
rosa_laevigata	RLG00000011397
rosa_multiflora	Rmu_co8516769.1_g000001 Rmu_sc0002895.1_g000008
rosa_roxburghii	Rroxscaffold_7G00168450
rosa_rugosa	Rorug06G0291500
rosa_samantha	Rh6AG402300 Rh6BG410800 Rh6CG416600 Rh6DG403700
rosa_wichuraiana	Rw6G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1544
AccB1I	GGYRCC	1 cut(s)	1142
AccB7I	CCANNNNNTGG	1 cut(s)	1154
AccBSI	CCGCTC	1 cut(s)	1581
AccII	CGCG	1 cut(s)	1397
AccIII	TCCGGA	1 cut(s)	921
AclWI	GGATC	7 cut(s)	317, 467, 837, 1568, 1581, 1757, 1770
AcsI	RAATTY	2 cut(s)	1503, 1819
AcyI	GRCGYC	1 cut(s)	89
AfaI	GTAC	4 cut(s)	369, 491, 1623, 1678
AfiI	CCNNNNNNNGG	2 cut(s)	482, 1154
AgsI	TTSAA	3 cut(s)	799, 1600, 1670
AjiI	CACGTC	1 cut(s)	1151
AjnI	CCWGG	1 cut(s)	1153
AjuI	GAANNNNNNNTTGG	2 cut(s)	1218, 1250
AluBI	AGCT	9 cut(s)	167, 340, 645, 821, 961, 1203, 1219, 1287, 1811
AluI	AGCT	9 cut(s)	167, 340, 645, 821, 961, 1203, 1219, 1287, 1811
Alw21I	GWGCWC	2 cut(s)	1205, 1289
Alw26I	GTCTC	3 cut(s)	395, 919, 1586
AlwI	GGATC	7 cut(s)	317, 467, 837, 1568, 1581, 1757, 1770
Ama87I	CYCGRG	1 cut(s)	231
Aor13HI	TCCGGA	1 cut(s)	921
AoxI	GGCC	5 cut(s)	389, 595, 854, 1524, 1672
ApaI	GGGCCC	1 cut(s)	393
ApeKI	GCWGC	4 cut(s)	205, 818, 977, 1811
ApoI	RAATTY	2 cut(s)	1503, 1819
ArsI	GACNNNNNNTTYG	2 cut(s)	14, 46
AseI	ATTAAT	1 cut(s)	1085
AspA2I	CCTAGG	1 cut(s)	1556
AspLEI	GCGC	2 cut(s)	448, 1399
AspS9I	GGNCC	6 cut(s)	185, 389, 390, 602, 1096, 1748
AsuC2I	CCSGG	3 cut(s)	778, 1383, 1451
AsuHPI	GGTGA	4 cut(s)	1250, 1325, 1808, 1817
AvaI	CYCGRG	1 cut(s)	231
AvaII	GGWCC	4 cut(s)	185, 602, 1096, 1748
AvrII	CCTAGG	1 cut(s)	1556
AxyI	CCTNAGG	1 cut(s)	1308
BaeGI	GKGCMC	2 cut(s)	393, 1147
BamHI	GGATCC	2 cut(s)	1573, 1762
BanI	GGYRCC	1 cut(s)	1142
BanII	GRGCYC	3 cut(s)	393, 1205, 1289
BbsI	GAAGAC	1 cut(s)	1363
Bbv12I	GWGCWC	2 cut(s)	1205, 1289
BbvI	GCAGC	4 cut(s)	217, 830, 964, 1798
BccI	CCATC	4 cut(s)	325, 1068, 1386, 1781
BceAI	ACGGC	1 cut(s)	1659
BciT130I	CCWGG	1 cut(s)	1155
BciVI	GTATCC	2 cut(s)	441, 1056
BclI	TGATCA	1 cut(s)	1189
BcnI	CCSGG	3 cut(s)	778, 1383, 1451
BcoDI	GTCTC	3 cut(s)	395, 919, 1586
BfaI	CTAG	1 cut(s)	1557
BfoI	RGCGCY	1 cut(s)	449
BfuI	GTATCC	2 cut(s)	441, 1056
BglII	AGATCT	1 cut(s)	1331
BisI	GCNGC	7 cut(s)	8, 206, 735, 738, 819, 978, 1812
BlnI	CCTAGG	1 cut(s)	1556
BlsI	GCNGC	7 cut(s)	9, 207, 736, 739, 820, 979, 1813
Bme1390I	CCNGG	4 cut(s)	778, 1155, 1383, 1451
Bme18I	GGWCC	4 cut(s)	185, 602, 1096, 1748
BmeT110I	CYCGRG	1 cut(s)	231
BmgBI	CACGTC	1 cut(s)	1151
BmgT120I	GGNCC	6 cut(s)	185, 389, 390, 602, 1096, 1748
BmiI	GGNNCC	5 cut(s)	391, 392, 1144, 1575, 1764
BmrFI	CCNGG	4 cut(s)	778, 1155, 1383, 1451
BmsI	GCATC	6 cut(s)	102, 271, 805, 1063, 1420, 1594
BpiI	GAAGAC	1 cut(s)	1363
BpuEI	CTTGAG	2 cut(s)	521, 632
BpuMI	CCSGG	3 cut(s)	778, 1383, 1451
BsaHI	GRCGYC	1 cut(s)	89
BsaJI	CCNNGG	7 cut(s)	230, 456, 515, 598, 1016, 1382, 1556
BsaWI	WCCGGW	1 cut(s)	921
BsaXI	ACNNNNNCTCC	4 cut(s)	211, 241, 265, 295
Bsc4I	CCNNNNNNNGG	2 cut(s)	482, 1154
Bse118I	RCCGGY	1 cut(s)	973
Bse1I	ACTGG	4 cut(s)	222, 318, 661, 831
Bse21I	CCTNAGG	1 cut(s)	1308
Bse3DI	GCAATG	2 cut(s)	1165, 1798
BseAI	TCCGGA	1 cut(s)	921
BseBI	CCWGG	1 cut(s)	1155
BseDI	CCNNGG	7 cut(s)	230, 456, 515, 598, 1016, 1382, 1556
BseLI	CCNNNNNNNGG	2 cut(s)	482, 1154
BseMI	GCAATG	2 cut(s)	1165, 1798
BseMII	CTCAG	6 cut(s)	318, 414, 422, 440, 1322, 1503
BseNI	ACTGG	4 cut(s)	222, 318, 661, 831
BseRI	GAGGAG	3 cut(s)	219, 1712, 1742
BseSI	GKGCMC	2 cut(s)	393, 1147
BseXI	GCAGC	4 cut(s)	217, 830, 964, 1798
BseYI	CCCAGC	1 cut(s)	142
Bsh1236I	CGCG	1 cut(s)	1397
Bsh1285I	CGRYCG	1 cut(s)	14
BshFI	GGCC	5 cut(s)	391, 597, 856, 1526, 1674
BshNI	GGYRCC	1 cut(s)	1142
BsiEI	CGRYCG	1 cut(s)	14
BsiHKAI	GWGCWC	2 cut(s)	1205, 1289
BsiHKCI	CYCGRG	1 cut(s)	231
BsiSI	CCGG	5 cut(s)	778, 922, 974, 1382, 1451
BslFI	GGGAC	3 cut(s)	64, 1673, 1746
BslI	CCNNNNNNNGG	2 cut(s)	482, 1154
BsmAI	GTCTC	3 cut(s)	395, 919, 1586
BsmFI	GGGAC	3 cut(s)	64, 1673, 1746
BsmI	GAATGC	1 cut(s)	1027
BsnI	GGCC	5 cut(s)	391, 597, 856, 1526, 1674
BsoBI	CYCGRG	1 cut(s)	231
Bsp120I	GGGCCC	1 cut(s)	389
Bsp1286I	GDGCHC	4 cut(s)	393, 1147, 1205, 1289
Bsp13I	TCCGGA	1 cut(s)	921
Bsp1407I	TGTACA	1 cut(s)	1621
Bsp143I	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
Bsp19I	CCATGG	1 cut(s)	1016
BspANI	GGCC	5 cut(s)	391, 597, 856, 1526, 1674
BspCNI	CTCAG	6 cut(s)	319, 415, 421, 441, 1321, 1504
BspEI	TCCGGA	1 cut(s)	921
BspFNI	CGCG	1 cut(s)	1397
BspHI	TCATGA	3 cut(s)	502, 1753, 1850
BspLI	GGNNCC	5 cut(s)	391, 392, 1144, 1575, 1764
BspPI	GGATC	7 cut(s)	317, 467, 837, 1568, 1581, 1757, 1770
BspQI	GCTCTTC	1 cut(s)	1133
BspT107I	GGYRCC	1 cut(s)	1142
BsrBI	CCGCTC	1 cut(s)	1581
BsrDI	GCAATG	2 cut(s)	1165, 1798
BsrFI	RCCGGY	1 cut(s)	973
BsrGI	TGTACA	1 cut(s)	1621
BsrI	ACTGG	4 cut(s)	222, 318, 661, 831
BssAI	RCCGGY	1 cut(s)	973
BssECI	CCNNGG	7 cut(s)	230, 456, 515, 598, 1016, 1382, 1556
BssMI	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
BssNI	GRCGYC	1 cut(s)	89
BssT1I	CCWWGG	3 cut(s)	598, 1016, 1556
Bst2UI	CCWGG	1 cut(s)	1155
Bst4CI	ACNGT	2 cut(s)	157, 457
Bst6I	CTCTTC	3 cut(s)	845, 936, 1133
BstACI	GRCGYC	1 cut(s)	89
BstAPI	GCANNNNNTGC	1 cut(s)	1073
BstAUI	TGTACA	1 cut(s)	1621
BstC8I	GCNNGC	7 cut(s)	165, 360, 595, 763, 901, 975, 1301
BstDEI	CTNAG	9 cut(s)	327, 408, 423, 449, 1111, 1308, 1496, 1512, 1584
BstDSI	CCRYGG	2 cut(s)	456, 1016
BstFNI	CGCG	1 cut(s)	1397
BstH2I	RGCGCY	1 cut(s)	449
BstHHI	GCGC	2 cut(s)	448, 1399
BstKTI	GATC	8 cut(s)	325, 475, 832, 886, 1192, 1334, 1576, 1765
BstMAI	GTCTC	3 cut(s)	395, 919, 1586
BstMBI	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
BstMCI	CGRYCG	1 cut(s)	14
BstMWI	GCNNNNNNNGC	3 cut(s)	13, 1073, 1123
BstNI	CCWGG	1 cut(s)	1155
BstSCI	CCNGG	4 cut(s)	776, 1153, 1381, 1449
BstSLI	GKGCMC	2 cut(s)	393, 1147
BstUI	CGCG	1 cut(s)	1397
BstV1I	GCAGC	4 cut(s)	217, 830, 964, 1798
BstV2I	GAAGAC	1 cut(s)	1363
BstX2I	RGATCY	4 cut(s)	829, 1331, 1573, 1762
BstYI	RGATCY	4 cut(s)	829, 1331, 1573, 1762
Bsu36I	CCTNAGG	1 cut(s)	1308
BsuI	GTATCC	2 cut(s)	441, 1056
BsuRI	GGCC	5 cut(s)	391, 597, 856, 1526, 1674
BtgI	CCRYGG	2 cut(s)	456, 1016
BtrI	CACGTC	1 cut(s)	1151
BtsIMutI	CAGTG	6 cut(s)	153, 291, 325, 345, 824, 1446
Cac8I	GCNNGC	7 cut(s)	165, 360, 595, 763, 901, 975, 1301
CciI	TCATGA	3 cut(s)	502, 1753, 1850
CfoI	GCGC	2 cut(s)	448, 1399
Cfr10I	RCCGGY	1 cut(s)	973
Cfr13I	GGNCC	6 cut(s)	185, 389, 390, 602, 1096, 1748
CseI	GACGC	1 cut(s)	78
Csp6I	GTAC	4 cut(s)	368, 490, 1622, 1677
CspCI	CAANNNNNGTGG	2 cut(s)	981, 1016
CviAII	CATG	9 cut(s)	503, 912, 1017, 1102, 1270, 1528, 1663, 1754, 1851
CviQI	GTAC	4 cut(s)	368, 490, 1622, 1677
DdeI	CTNAG	9 cut(s)	327, 408, 423, 449, 1111, 1308, 1496, 1512, 1584
DpnI	GATC	8 cut(s)	324, 474, 831, 885, 1191, 1333, 1575, 1764
DpnII	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
Eam1104I	CTCTTC	3 cut(s)	845, 936, 1133
EarI	CTCTTC	3 cut(s)	845, 936, 1133
EciI	GGCGGA	1 cut(s)	501
Ecl136II	GAGCTC	2 cut(s)	1203, 1287
Eco130I	CCWWGG	3 cut(s)	598, 1016, 1556
Eco24I	GRGCYC	3 cut(s)	393, 1205, 1289
Eco47I	GGWCC	4 cut(s)	185, 602, 1096, 1748
Eco53kI	GAGCTC	2 cut(s)	1203, 1287
Eco81I	CCTNAGG	1 cut(s)	1308
Eco88I	CYCGRG	1 cut(s)	231
EcoICRI	GAGCTC	2 cut(s)	1203, 1287
EcoO109I	RGGNCCY	1 cut(s)	390
EcoRII	CCWGG	1 cut(s)	1153
EcoT14I	CCWWGG	3 cut(s)	598, 1016, 1556
EcoT22I	ATGCAT	1 cut(s)	1609
EcoT38I	GRGCYC	3 cut(s)	393, 1205, 1289
ErhI	CCWWGG	3 cut(s)	598, 1016, 1556
FaeI	CATG	9 cut(s)	506, 915, 1020, 1105, 1273, 1531, 1666, 1757, 1854
FalI	AAGNNNNNCTT	4 cut(s)	950, 982, 1321, 1353
FaqI	GGGAC	3 cut(s)	64, 1673, 1746
FatI	CATG	9 cut(s)	502, 911, 1016, 1101, 1269, 1527, 1662, 1753, 1850
FauI	CCCGC	3 cut(s)	367, 476, 1586
FbaI	TGATCA	1 cut(s)	1189
Fnu4HI	GCNGC	7 cut(s)	8, 206, 735, 738, 819, 978, 1812
FriOI	GRGCYC	3 cut(s)	393, 1205, 1289
Fsp4HI	GCNGC	7 cut(s)	8, 206, 735, 738, 819, 978, 1812
FspBI	CTAG	1 cut(s)	1557
GlaI	GCGC	2 cut(s)	447, 1398
GluI	GCNGC	7 cut(s)	8, 206, 735, 738, 819, 978, 1812
GsaI	CCCAGC	1 cut(s)	146
HaeII	RGCGCY	1 cut(s)	449
HaeIII	GGCC	5 cut(s)	391, 597, 856, 1526, 1674
HapII	CCGG	5 cut(s)	778, 922, 974, 1382, 1451
HgaI	GACGC	1 cut(s)	78
HhaI	GCGC	2 cut(s)	448, 1399
Hin1I	GRCGYC	1 cut(s)	89
Hin1II	CATG	9 cut(s)	506, 915, 1020, 1105, 1273, 1531, 1666, 1757, 1854
Hin6I	GCGC	2 cut(s)	446, 1397
HinP1I	GCGC	2 cut(s)	446, 1397
HindIII	AAGCTT	1 cut(s)	959
HpaII	CCGG	5 cut(s)	778, 922, 974, 1382, 1451
HphI	GGTGA	4 cut(s)	1250, 1325, 1808, 1817
Hpy166II	GTNNAC	2 cut(s)	564, 582
Hpy188I	TCNGA	8 cut(s)	34, 66, 199, 259, 400, 411, 693, 1284
Hpy188III	TCNNGA	8 cut(s)	109, 326, 416, 503, 922, 1511, 1754, 1851
Hpy8I	GTNNAC	2 cut(s)	564, 582
Hpy99I	CGWCG	3 cut(s)	22, 34, 658
HpyAV	CCTTC	6 cut(s)	40, 405, 518, 1510, 1664, 1777
HpyCH4III	ACNGT	2 cut(s)	157, 457
HpyCH4IV	ACGT	1 cut(s)	1150
HpyF10VI	GCNNNNNNNGC	3 cut(s)	13, 1073, 1123
HpyF3I	CTNAG	9 cut(s)	327, 408, 423, 449, 1111, 1308, 1496, 1512, 1584
HpySE526I	ACGT	1 cut(s)	1150
Hsp92I	GRCGYC	1 cut(s)	89
Hsp92II	CATG	9 cut(s)	506, 915, 1020, 1105, 1273, 1531, 1666, 1757, 1854
HspAI	GCGC	2 cut(s)	446, 1397
Kpn2I	TCCGGA	1 cut(s)	921
KroI	GCCGGC	1 cut(s)	973
KroNI	GCCGGC	1 cut(s)	975
Ksp22I	TGATCA	1 cut(s)	1189
Kzo9I	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
LguI	GCTCTTC	1 cut(s)	1133
LmnI	GCTCC	5 cut(s)	34, 160, 259, 864, 1292
Lsp1109I	GCAGC	4 cut(s)	217, 830, 964, 1798
LweI	GCATC	6 cut(s)	102, 271, 805, 1063, 1420, 1594
MaeI	CTAG	1 cut(s)	1557
MaeII	ACGT	1 cut(s)	1150
MaeIII	GTNAC	5 cut(s)	217, 271, 313, 373, 1642
MalI	GATC	8 cut(s)	324, 474, 831, 885, 1191, 1333, 1575, 1764
MbiI	CCGCTC	1 cut(s)	1581
MboI	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
MflI	RGATCY	4 cut(s)	829, 1331, 1573, 1762
MhlI	GDGCHC	4 cut(s)	393, 1147, 1205, 1289
MluCI	AATT	5 cut(s)	173, 384, 1086, 1503, 1819
MlyI	GAGTC	2 cut(s)	421, 716
MmeI	TCCRAC	6 cut(s)	12, 1203, 1569, 1688, 1704, 1726
Mph1103I	ATGCAT	1 cut(s)	1609
MroI	TCCGGA	1 cut(s)	921
MroNI	GCCGGC	1 cut(s)	973
MseI	TTAA	2 cut(s)	522, 1085
MslI	CAYNNNNRTG	1 cut(s)	1274
MspI	CCGG	5 cut(s)	778, 922, 974, 1382, 1451
MspR9I	CCNGG	4 cut(s)	778, 1155, 1383, 1451
Mva1269I	GAATGC	1 cut(s)	1027
MvaI	CCWGG	1 cut(s)	1155
MvnI	CGCG	1 cut(s)	1397
MwoI	GCNNNNNNNGC	3 cut(s)	13, 1073, 1123
NaeI	GCCGGC	1 cut(s)	975
NciI	CCSGG	3 cut(s)	778, 1383, 1451
NcoI	CCATGG	1 cut(s)	1016
NdeII	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
NgoMIV	GCCGGC	1 cut(s)	973
NlaIII	CATG	9 cut(s)	506, 915, 1020, 1105, 1273, 1531, 1666, 1757, 1854
NlaIV	GGNNCC	5 cut(s)	391, 392, 1144, 1575, 1764
NmeAIII	GCCGAG	1 cut(s)	540
NmuCI	GTSAC	3 cut(s)	217, 271, 313
NsiI	ATGCAT	1 cut(s)	1609
PagI	TCATGA	3 cut(s)	502, 1753, 1850
PciSI	GCTCTTC	1 cut(s)	1133
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PctI	GAATGC	1 cut(s)	1027
PdiI	GCCGGC	1 cut(s)	975
PfeI	GAWTC	9 cut(s)	61, 241, 254, 350, 795, 1007, 1316, 1343, 1799
PflMI	CCANNNNNTGG	1 cut(s)	1154
PfoI	TCCNGGA	1 cut(s)	1449
PkrI	GCNGC	7 cut(s)	9, 207, 736, 739, 820, 979, 1813
PleI	GAGTC	2 cut(s)	420, 716
PpsI	GAGTC	2 cut(s)	420, 716
PshBI	ATTAAT	1 cut(s)	1085
PsiI	TTATAA	1 cut(s)	1544
Psp124BI	GAGCTC	2 cut(s)	1205, 1289
Psp6I	CCWGG	1 cut(s)	1153
PspFI	CCCAGC	1 cut(s)	142
PspGI	CCWGG	1 cut(s)	1153
PspN4I	GGNNCC	5 cut(s)	391, 392, 1144, 1575, 1764
PspOMI	GGGCCC	1 cut(s)	389
PspPI	GGNCC	6 cut(s)	185, 389, 390, 602, 1096, 1748
PsuI	RGATCY	4 cut(s)	829, 1331, 1573, 1762
RsaI	GTAC	4 cut(s)	369, 491, 1623, 1678
RsaNI	GTAC	4 cut(s)	368, 490, 1622, 1677
RseI	CAYNNNNRTG	1 cut(s)	1274
SacI	GAGCTC	2 cut(s)	1205, 1289
SapI	GCTCTTC	1 cut(s)	1133
SaqAI	TTAA	2 cut(s)	522, 1085
SatI	GCNGC	7 cut(s)	8, 206, 735, 738, 819, 978, 1812
Sau3AI	GATC	8 cut(s)	322, 472, 829, 883, 1189, 1331, 1573, 1762
Sau96I	GGNCC	6 cut(s)	185, 389, 390, 602, 1096, 1748
SchI	GAGTC	2 cut(s)	421, 716
ScrFI	CCNGG	4 cut(s)	778, 1155, 1383, 1451
SduI	GDGCHC	4 cut(s)	393, 1147, 1205, 1289
SfaNI	GCATC	6 cut(s)	102, 271, 805, 1063, 1420, 1594
SinI	GGWCC	4 cut(s)	185, 602, 1096, 1748
SmiMI	CAYNNNNRTG	1 cut(s)	1274
SmlI	CTYRAG	2 cut(s)	536, 611
SmoI	CTYRAG	2 cut(s)	536, 611
Sse9I	AATT	5 cut(s)	173, 384, 1086, 1503, 1819
SspI	AATATT	1 cut(s)	1477
SspMI	CTAG	1 cut(s)	1557
SstI	GAGCTC	2 cut(s)	1205, 1289
StyD4I	CCNGG	4 cut(s)	776, 1153, 1381, 1449
StyI	CCWWGG	3 cut(s)	598, 1016, 1556
TaaI	ACNGT	2 cut(s)	157, 457
TaiI	ACGT	1 cut(s)	1153
TaqI	TCGA	4 cut(s)	415, 1169, 1346, 1635
TasI	AATT	5 cut(s)	173, 384, 1086, 1503, 1819
TatI	WGTACW	1 cut(s)	1621
TauI	GCSGC	3 cut(s)	10, 737, 740
TfiI	GAWTC	9 cut(s)	61, 241, 254, 350, 795, 1007, 1316, 1343, 1799
Tru1I	TTAA	2 cut(s)	522, 1085
Tru9I	TTAA	2 cut(s)	522, 1085
TscAI	CASTG	6 cut(s)	160, 298, 325, 352, 831, 1446
TseFI	GTSAC	3 cut(s)	217, 271, 313
TseI	GCWGC	4 cut(s)	205, 818, 977, 1811
Tsp45I	GTSAC	3 cut(s)	217, 271, 313
TspDTI	ATGAA	9 cut(s)	119, 491, 710, 863, 954, 1308, 1435, 1770, 1848
TspGWI	ACGGA	3 cut(s)	423, 465, 1032
TspRI	CASTG	6 cut(s)	160, 298, 325, 352, 831, 1446
Van91I	CCANNNNNTGG	1 cut(s)	1154
VpaK11BI	GGWCC	4 cut(s)	185, 602, 1096, 1748
VspI	ATTAAT	1 cut(s)	1085
XapI	RAATTY	2 cut(s)	1503, 1819
XmaJI	CCTAGG	1 cut(s)	1556
XspI	CTAG	1 cut(s)	1557
Zsp2I	ATGCAT	1 cut(s)	1609

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.