Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006486

Physical Location & Seq

Genomic Coordinates Forward (+)

2599121 .. 2602831

Gene Structure 3711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1037400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGACCGTTGAGCGGGTACTCGATGAACCCAGAGACCAGTTTCCCATTGGGATGCGTGTGCTTGCCGTAGACGATGATCCCATTTGTCTCAAGCTCTTAGAGGCTCTGCTCCGTAGATGTCAATATCATGGTTTGTCAATTGGATTGGTATGCTTTGGTTGCTCTACTTTTGCATCTGAAGTTACGACGAGGAGTCACGCAATCACTGCATTAAAGTTGTTGAGAGAAAACAAGGACAAGTTTGACCTGGTTATCAGTGATGTGCAGATGCCAGACATGGATGGATTCAAGCTACTTGAGCTTGTCGGGCTTGAGATGGATCTCCCTGTTATAATGTTGTCTGTAAATGGGGATCACAAGCTTGTGATGAAGGGAATCACCCACGGAGCTTGCGATTACCTCCTAAAACCGGTTCGAATTGAGCAGCTGAAGAACATCTGGCAGCACGTGATCAGAAAGAAGGTTGATTCAAAGGACCAGAACTCTGGCATTCAAGACAAGTCGCACGCTGGAAATGGCGAAGGAGGACTTGGGTCAGTAGGGACGGGAAACTCAGATCAGAATGCAAAGCTCAATAAGAAACGGAAGGATCAGAATGACGGCGAGGACGAGGATCATGATGAGGATGAATATGAAAATGACGATCCTTCAACCCAGAAAAAGCCTCGCGTTGTTTGGTCTGTGGAGCTGCATCGCAAATTTGTGGCTGCTGTTAATCAGTTGGGCATTGACAAGGCTGTACCGAAAAAGATTCTAGATTTGATGAATGTTGAAAAGCTTACAAGGGAAAATGTTGCAAGCCATCTCCAGAAGTATAGGCTCTACCTGAAAAGGATCAGCTGTGTGGCAAACCAACAAGCTAATATGGTGGCAGCCTTAGGCACTTCGGATTCTTCATATTTGCGAACAGCTTCTATGAATGGAGTTGGAAATTACCATGCATTGACTGGACCTGCGCAGTTTCATAACAACGGATACAGATCCTTCCCGCCTAATGGGATGATTGGTAGATTGAACACTCCTGCTGGTGTGGGTCTGCATTGCCTTCCTTCATCCGGAATGTTTCAATTGGGTCATGCACAGAATCCAAGCAACTCCATTAATGATCAGCCAGTCATGTTTCCTGGAAACCGTAATGGAAATATGCTTCCGGCACACTTGGAACTTGATCAGCAACATAGTAGGGGTTCCACCTATGACGCACCAATTTATCCCAATTCCAGTGGTTTTACGGATGGAAAAGTGACGAATAGGTCAAATGATCCTTTCGGTCTTACAGACAACACATTGTTAAGACATACTCAAGATTCTGAAGTCGGAAGAAATCATGTAATGTTGCAGTCTTCTGTATCAATGCCCTCCTTAAAACCAGAACTGTTGCCCTCGTTTCTGGATCACAGACGGTTGAATGACAACTGGCCGACCGCTGCTCAGTCATCTGCATTCCGGTCAAATTCTTTCTCAGCACGCGACTCTTTTAAACAACCTACTCTTCTTGATTCAAGAATAGGAATGCAGGTCCCGGCATCTACAATGAGCAATAATTCTGGGCCAACAATTAACAATGACCTGTTTATGGGGTGGGATGAACCGAAGCAGGATTCCCCGTTCCGCCCAGATGTCATGTGTAGCTCAATGAACAATTTGATGCCTGTCAATGATAACGTAGCTCCTTTTGACCAGAATTTGGACGCTAGAAGCTCAGCCTTCCAAAGAAACAGCGACTTCAATTCGATTGGACAACCAGATTTTCTTGATGTTGAAATATCAACTATGGATGCACCATTGAAGTTGAAGCAGCAGGGGTACCTTATGGACCAACGGAAGCCACAGGGCGGTTATGTTCCCCACAATGCTGGTTCGTTGGATGAGTTAGTGAGCTCAATGATGAAACAGGAAAGGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

636

Amino Acids

70.55

Weight (kDa)

6.18

Isoelectric Point (pI)

41.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	21 - 145	6.6e-17	Response regulator receiver domain
Myb_DNA-binding	PF00249	223 - 273	1.1e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25180 AT4G31920
fragaria_vesca	FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890
malus_domestica	MD08G1059000.v1.1 MD15G1037400.v1.1
prunus_persica	Prupe.1G391400_v2.0.a1 Prupe.1G391400_v2.0.a1
pyrus_communis	pycom08g04890 pycom15g03450 pycom15g03460
rosa_chinensis	RchiOBHm_Chr6g0299681
rosa_laevigata	RLG00000011397
rosa_multiflora	Rmu_co8516769.1_g000001 Rmu_sc0002895.1_g000008
rosa_roxburghii	Rroxscaffold_7G00168450
rosa_rugosa	Rorug06G0291500
rosa_samantha	Rh6AG402300 Rh6BG410800 Rh6CG416600 Rh6DG403700
rosa_wichuraiana	Rw6G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	332
AasI	GACNNNNNNGTC	1 cut(s)	1252
Acc16I	TGCGCA	1 cut(s)	957
Acc36I	ACCTGC	2 cut(s)	961, 1507
Acc65I	GGTACC	1 cut(s)	1806
AccB1I	GGYRCC	1 cut(s)	1806
AccB7I	CCANNNNNTGG	1 cut(s)	1687
AccBSI	CCGCTC	1 cut(s)	13
AccI	GTMKAC	1 cut(s)	69
AccII	CGCG	2 cut(s)	669, 1470
AccIII	TCCGGA	1 cut(s)	1055
AciI	CCGC	5 cut(s)	13, 989, 1425, 1612, 1836
AcoI	YGGCCR	1 cut(s)	1418
AcsI	RAATTY	3 cut(s)	698, 1453, 1684
AcuI	CTGAAG	3 cut(s)	198, 449, 1332
AcvI	CACGTG	1 cut(s)	448
AfaI	GTAC	3 cut(s)	18, 741, 1808
AfiI	CCNNNNNNNGG	7 cut(s)	12, 409, 995, 1055, 1576, 1687, 1835
AgeI	ACCGGT	1 cut(s)	409
AhdI	GACNNNNNGTC	1 cut(s)	192
AjnI	CCWGG	2 cut(s)	246, 1123
AjuI	GAANNNNNNNTTGG	2 cut(s)	513, 545
AloI	GAACNNNNNNTCC	2 cut(s)	1592, 1624
Alw21I	GWGCWC	1 cut(s)	1883
Alw26I	GTCTC	2 cut(s)	27, 92
Aor13HI	TCCGGA	1 cut(s)	1055
AoxI	GGCC	2 cut(s)	1418, 1550
ApeKI	GCWGC	7 cut(s)	424, 442, 688, 707, 872, 1427, 1798
ApoI	RAATTY	3 cut(s)	698, 1453, 1684
AseI	ATTAAT	1 cut(s)	1101
AsiGI	ACCGGT	1 cut(s)	409
Asp700I	GAANNNNTTC	1 cut(s)	910
Asp718I	GGTACC	1 cut(s)	1806
AspLEI	GCGC	1 cut(s)	958
AspS9I	GGNCC	5 cut(s)	475, 950, 1519, 1550, 1816
AsuC2I	CCSGG	1 cut(s)	1523
AsuHPI	GGTGA	1 cut(s)	370
AsuII	TTCGAA	1 cut(s)	415
AvaII	GGWCC	4 cut(s)	475, 950, 1519, 1816
AxyI	CCTNAGG	1 cut(s)	877
BanI	GGYRCC	1 cut(s)	1806
BanII	GRGCYC	1 cut(s)	1883
BbrPI	CACGTG	1 cut(s)	448
BbsI	GAAGAC	1 cut(s)	1335
Bbv12I	GWGCWC	1 cut(s)	1883
BbvI	GCAGC	7 cut(s)	436, 454, 675, 694, 884, 1414, 1810
BccI	CCATC	4 cut(s)	275, 310, 810, 1229
BceAI	ACGGC	2 cut(s)	50, 616
BciT130I	CCWGG	2 cut(s)	248, 1125
BciVI	GTATCC	1 cut(s)	968
BclI	TGATCA	3 cut(s)	450, 1105, 1168
BcnI	CCSGG	1 cut(s)	1523
BcoDI	GTCTC	2 cut(s)	27, 92
BfaI	CTAG	2 cut(s)	755, 1695
BfuAI	ACCTGC	2 cut(s)	961, 1507
BfuI	GTATCC	1 cut(s)	968
BisI	GCNGC	7 cut(s)	425, 443, 689, 708, 873, 1428, 1799
BlpI	GCTNAGC	1 cut(s)	1702
BlsI	GCNGC	7 cut(s)	426, 444, 690, 709, 874, 1429, 1800
Bme1390I	CCNGG	3 cut(s)	248, 1125, 1523
Bme18I	GGWCC	4 cut(s)	475, 950, 1519, 1816
BmeRI	GACNNNNNGTC	1 cut(s)	192
BmgT120I	GGNCC	5 cut(s)	475, 950, 1519, 1550, 1816
BmiI	GGNNCC	3 cut(s)	1189, 1521, 1808
BmrFI	CCNGG	3 cut(s)	248, 1125, 1523
BmsI	GCATC	7 cut(s)	42, 182, 258, 700, 1535, 1638, 1768
BoxI	GACNNNNGTC	1 cut(s)	532
BpiI	GAAGAC	1 cut(s)	1335
BpmI	CTGGAG	1 cut(s)	791
Bpu1102I	GCTNAGC	1 cut(s)	1702
Bpu14I	TTCGAA	1 cut(s)	415
BpuEI	CTTGAG	4 cut(s)	74, 317, 332, 1287
BpuMI	CCSGG	1 cut(s)	1523
BsaAI	YACGTR	1 cut(s)	448
BsaBI	GATNNNNATC	1 cut(s)	979
BsaI	GGTCTC	1 cut(s)	27
BsaJI	CCNNGG	1 cut(s)	382
BsaWI	WCCGGW	3 cut(s)	409, 1055, 1446
Bsc4I	CCNNNNNNNGG	7 cut(s)	12, 409, 995, 1055, 1576, 1687, 1835
Bse118I	RCCGGY	1 cut(s)	409
Bse1I	ACTGG	5 cut(s)	37, 952, 1112, 1221, 1421
Bse21I	CCTNAGG	1 cut(s)	877
Bse3DI	GCAATG	1 cut(s)	1039
Bse8I	GATNNNNATC	1 cut(s)	979
BseAI	TCCGGA	1 cut(s)	1055
BseBI	CCWGG	2 cut(s)	248, 1125
BseDI	CCNNGG	1 cut(s)	382
BseGI	GGATG	9 cut(s)	57, 286, 631, 1005, 1052, 1240, 1591, 1783, 1873
BseJI	GATNNNNATC	1 cut(s)	979
BseLI	CCNNNNNNNGG	7 cut(s)	12, 409, 995, 1055, 1576, 1687, 1835
BseMI	GCAATG	1 cut(s)	1039
BseMII	CTCAG	4 cut(s)	567, 1445, 1476, 1716
BseNI	ACTGG	5 cut(s)	37, 952, 1112, 1221, 1421
BseRI	GAGGAG	1 cut(s)	205
BseXI	GCAGC	7 cut(s)	436, 454, 675, 694, 884, 1414, 1810
BsgI	GTGCAG	1 cut(s)	284
Bsh1236I	CGCG	2 cut(s)	669, 1470
Bsh1285I	CGRYCG	1 cut(s)	1425
BshFI	GGCC	2 cut(s)	1420, 1552
BshNI	GGYRCC	1 cut(s)	1806
BshTI	ACCGGT	1 cut(s)	409
BsiEI	CGRYCG	1 cut(s)	1425
BsiHKAI	GWGCWC	1 cut(s)	1883
BsiSI	CCGG	5 cut(s)	410, 1056, 1151, 1447, 1523
BslFI	GGGAC	2 cut(s)	556, 1505
BslI	CCNNNNNNNGG	7 cut(s)	12, 409, 995, 1055, 1576, 1687, 1835
BsmAI	GTCTC	2 cut(s)	27, 92
BsmFI	GGGAC	2 cut(s)	556, 1505
BsmI	GAATGC	4 cut(s)	489, 568, 1442, 1518
BsnI	GGCC	2 cut(s)	1420, 1552
Bso31I	GGTCTC	1 cut(s)	27
Bsp119I	TTCGAA	1 cut(s)	415
Bsp1286I	GDGCHC	1 cut(s)	1883
Bsp13I	TCCGGA	1 cut(s)	1055
Bsp1720I	GCTNAGC	1 cut(s)	1702
BspACI	CCGC	5 cut(s)	13, 989, 1425, 1612, 1836
BspANI	GGCC	2 cut(s)	1420, 1552
BspCNI	CTCAG	4 cut(s)	566, 1444, 1475, 1715
BspEI	TCCGGA	1 cut(s)	1055
BspFNI	CGCG	2 cut(s)	669, 1470
BspHI	TCATGA	1 cut(s)	616
BspLI	GGNNCC	3 cut(s)	1189, 1521, 1808
BspMI	ACCTGC	2 cut(s)	961, 1507
BspT104I	TTCGAA	1 cut(s)	415
BspT107I	GGYRCC	1 cut(s)	1806
BspTNI	GGTCTC	1 cut(s)	27
BsrBI	CCGCTC	1 cut(s)	13
BsrDI	GCAATG	1 cut(s)	1039
BsrFI	RCCGGY	1 cut(s)	409
BsrI	ACTGG	5 cut(s)	37, 952, 1112, 1221, 1421
BssAI	RCCGGY	1 cut(s)	409
BssECI	CCNNGG	1 cut(s)	382
Bst2UI	CCWGG	2 cut(s)	248, 1125
Bst4CI	ACNGT	4 cut(s)	7, 1133, 1377, 1404
Bst6I	CTCTTC	1 cut(s)	1497
BstAPI	GCANNNNNTGC	1 cut(s)	206
BstBAI	YACGTR	1 cut(s)	448
BstBI	TTCGAA	1 cut(s)	415
BstC8I	GCNNGC	5 cut(s)	63, 391, 507, 799, 1468
BstDEI	CTNAG	6 cut(s)	97, 553, 877, 1431, 1462, 1702
BstDSI	CCRYGG	1 cut(s)	382
BstF5I	GGATG	9 cut(s)	57, 286, 631, 1005, 1052, 1240, 1591, 1783, 1873
BstFNI	CGCG	2 cut(s)	669, 1470
BstHHI	GCGC	1 cut(s)	958
BstMAI	GTCTC	2 cut(s)	27, 92
BstMCI	CGRYCG	1 cut(s)	1425
BstMWI	GCNNNNNNNGC	4 cut(s)	159, 206, 298, 307
BstNI	CCWGG	2 cut(s)	248, 1125
BstPAI	GACNNNNGTC	1 cut(s)	532
BstSCI	CCNGG	3 cut(s)	246, 1123, 1521
BstUI	CGCG	2 cut(s)	669, 1470
BstV1I	GCAGC	7 cut(s)	436, 454, 675, 694, 884, 1414, 1810
BstV2I	GAAGAC	1 cut(s)	1335
BstX2I	RGATCY	2 cut(s)	319, 980
BstXI	CCANNNNNNTGG	2 cut(s)	485, 1856
BstYI	RGATCY	2 cut(s)	319, 980
Bsu36I	CCTNAGG	1 cut(s)	877
BsuI	GTATCC	1 cut(s)	968
BsuRI	GGCC	2 cut(s)	1420, 1552
BtgI	CCRYGG	1 cut(s)	382
BtgZI	GCGATG	1 cut(s)	677
BtsCI	GGATG	9 cut(s)	57, 286, 631, 1005, 1052, 1240, 1591, 1783, 1873
BtsI	GCAGTG	1 cut(s)	204
BtsIMutI	CAGTG	3 cut(s)	204, 262, 1228
BveI	ACCTGC	2 cut(s)	961, 1507
Cac8I	GCNNGC	5 cut(s)	63, 391, 507, 799, 1468
CciI	TCATGA	1 cut(s)	616
CfoI	GCGC	1 cut(s)	958
Cfr10I	RCCGGY	1 cut(s)	409
Cfr13I	GGNCC	5 cut(s)	475, 950, 1519, 1550, 1816
CseI	GACGC	2 cut(s)	1208, 1700
CsiI	ACCWGGT	1 cut(s)	246
Csp6I	GTAC	3 cut(s)	17, 740, 1807
CspAI	ACCGGT	1 cut(s)	409
CspCI	CAANNNNNGTGG	4 cut(s)	371, 406, 1204, 1239
CviAII	CATG	8 cut(s)	128, 277, 617, 938, 1076, 1117, 1328, 1624
CviQI	GTAC	3 cut(s)	17, 740, 1807
DdeI	CTNAG	6 cut(s)	97, 553, 877, 1431, 1462, 1702
DraI	TTTAAA	1 cut(s)	1480
DrdI	GACNNNNNNGTC	1 cut(s)	1252
DriI	GACNNNNNGTC	1 cut(s)	192
DseDI	GACNNNNNNGTC	1 cut(s)	1252
EaeI	YGGCCR	1 cut(s)	1418
Eam1104I	CTCTTC	1 cut(s)	1497
Eam1105I	GACNNNNNGTC	1 cut(s)	192
EarI	CTCTTC	1 cut(s)	1497
EciI	GGCGGA	1 cut(s)	1601
Ecl136II	GAGCTC	1 cut(s)	1881
Eco24I	GRGCYC	1 cut(s)	1883
Eco31I	GGTCTC	1 cut(s)	27
Eco47I	GGWCC	4 cut(s)	475, 950, 1519, 1816
Eco53kI	GAGCTC	1 cut(s)	1881
Eco57I	CTGAAG	3 cut(s)	198, 449, 1332
Eco72I	CACGTG	1 cut(s)	448
Eco81I	CCTNAGG	1 cut(s)	877
EcoICRI	GAGCTC	1 cut(s)	1881
EcoO109I	RGGNCCY	1 cut(s)	1519
EcoRII	CCWGG	2 cut(s)	246, 1123
EcoT22I	ATGCAT	1 cut(s)	943
EcoT38I	GRGCYC	1 cut(s)	1883
FaeI	CATG	8 cut(s)	131, 280, 620, 941, 1079, 1120, 1331, 1627
FalI	AAGNNNNNCTT	2 cut(s)	513, 545
FaqI	GGGAC	2 cut(s)	556, 1505
FatI	CATG	8 cut(s)	127, 276, 616, 937, 1075, 1116, 1327, 1623
FauI	CCCGC	2 cut(s)	6, 996
FbaI	TGATCA	3 cut(s)	450, 1105, 1168
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	7 cut(s)	425, 443, 689, 708, 873, 1428, 1799
FokI	GGATG	9 cut(s)	64, 293, 638, 1012, 1039, 1247, 1598, 1790, 1880
FriOI	GRGCYC	1 cut(s)	1883
Fsp4HI	GCNGC	7 cut(s)	425, 443, 689, 708, 873, 1428, 1799
FspBI	CTAG	2 cut(s)	755, 1695
FspI	TGCGCA	1 cut(s)	957
GlaI	GCGC	1 cut(s)	957
GluI	GCNGC	7 cut(s)	425, 443, 689, 708, 873, 1428, 1799
GsuI	CTGGAG	1 cut(s)	791
HaeIII	GGCC	2 cut(s)	1420, 1552
HapII	CCGG	5 cut(s)	410, 1056, 1151, 1447, 1523
HgaI	GACGC	2 cut(s)	1208, 1700
HhaI	GCGC	1 cut(s)	958
Hin1II	CATG	8 cut(s)	131, 280, 620, 941, 1079, 1120, 1331, 1627
Hin6I	GCGC	1 cut(s)	956
HinP1I	GCGC	1 cut(s)	956
HindIII	AAGCTT	2 cut(s)	359, 776
HpaII	CCGG	5 cut(s)	410, 1056, 1151, 1447, 1523
HphI	GGTGA	1 cut(s)	370
Hpy166II	GTNNAC	1 cut(s)	70
Hpy188I	TCNGA	8 cut(s)	178, 455, 556, 561, 594, 889, 1312, 1319
Hpy8I	GTNNAC	1 cut(s)	70
Hpy99I	CGWCG	1 cut(s)	190
HpyAV	CCTTC	9 cut(s)	364, 454, 515, 580, 657, 994, 1055, 1059, 1717
HpyCH4III	ACNGT	4 cut(s)	7, 1133, 1377, 1404
HpyCH4IV	ACGT	2 cut(s)	447, 1665
HpyF10VI	GCNNNNNNNGC	4 cut(s)	159, 206, 298, 307
HpyF3I	CTNAG	6 cut(s)	97, 553, 877, 1431, 1462, 1702
HpySE526I	ACGT	2 cut(s)	447, 1665
Hsp92II	CATG	8 cut(s)	131, 280, 620, 941, 1079, 1120, 1331, 1627
HspAI	GCGC	1 cut(s)	956
Kpn2I	TCCGGA	1 cut(s)	1055
KpnI	GGTACC	1 cut(s)	1810
Ksp22I	TGATCA	3 cut(s)	450, 1105, 1168
LmnI	GCTCC	4 cut(s)	114, 386, 685, 1675
Lsp1109I	GCAGC	7 cut(s)	436, 454, 675, 694, 884, 1414, 1810
LweI	GCATC	7 cut(s)	42, 182, 258, 700, 1535, 1638, 1768
MabI	ACCWGGT	1 cut(s)	246
MaeI	CTAG	2 cut(s)	755, 1695
MaeII	ACGT	2 cut(s)	447, 1665
MaeIII	GTNAC	3 cut(s)	181, 194, 1243
MbiI	CCGCTC	1 cut(s)	13
MboII	GAAGA	5 cut(s)	442, 885, 1332, 1335, 1484
MfeI	CAATTG	2 cut(s)	138, 1067
MflI	RGATCY	2 cut(s)	319, 980
MhlI	GDGCHC	1 cut(s)	1883
MlyI	GAGTC	2 cut(s)	202, 1466
MmeI	TCCRAC	3 cut(s)	907, 1297, 1845
Mph1103I	ATGCAT	1 cut(s)	943
MroI	TCCGGA	1 cut(s)	1055
MroXI	GAANNNNTTC	1 cut(s)	910
MseI	TTAA	7 cut(s)	212, 714, 1101, 1292, 1364, 1479, 1560
MslI	CAYNNNNRTG	1 cut(s)	50
MspA1I	CMGCKG	3 cut(s)	427, 840, 1427
MspI	CCGG	5 cut(s)	410, 1056, 1151, 1447, 1523
MspR9I	CCNGG	3 cut(s)	248, 1125, 1523
MunI	CAATTG	2 cut(s)	138, 1067
Mva1269I	GAATGC	4 cut(s)	489, 568, 1442, 1518
MvaI	CCWGG	2 cut(s)	248, 1125
MvnI	CGCG	2 cut(s)	669, 1470
MwoI	GCNNNNNNNGC	4 cut(s)	159, 206, 298, 307
NciI	CCSGG	1 cut(s)	1523
NlaIII	CATG	8 cut(s)	131, 280, 620, 941, 1079, 1120, 1331, 1627
NlaIV	GGNNCC	3 cut(s)	1189, 1521, 1808
NmuCI	GTSAC	2 cut(s)	194, 1243
NsbI	TGCGCA	1 cut(s)	957
NsiI	ATGCAT	1 cut(s)	943
NspV	TTCGAA	1 cut(s)	415
PagI	TCATGA	1 cut(s)	616
PcsI	WCGNNNNNNNCGW	2 cut(s)	390, 606
PctI	GAATGC	4 cut(s)	489, 568, 1442, 1518
PdmI	GAANNNNTTC	1 cut(s)	910
PfeI	GAWTC	9 cut(s)	285, 375, 467, 751, 890, 1084, 1307, 1499, 1601
PflMI	CCANNNNNTGG	1 cut(s)	1687
PfoI	TCCNGGA	1 cut(s)	1123
PinAI	ACCGGT	1 cut(s)	409
PkrI	GCNGC	7 cut(s)	426, 444, 690, 709, 874, 1429, 1800
PleI	GAGTC	2 cut(s)	201, 1466
PmaCI	CACGTG	1 cut(s)	448
PmlI	CACGTG	1 cut(s)	448
PpsI	GAGTC	2 cut(s)	201, 1466
Ppu21I	YACGTR	1 cut(s)	448
PpuMI	RGGWCCY	1 cut(s)	1519
PshAI	GACNNNNGTC	1 cut(s)	532
PshBI	ATTAAT	1 cut(s)	1101
PsiI	TTATAA	1 cut(s)	332
Psp124BI	GAGCTC	1 cut(s)	1883
Psp5II	RGGWCCY	1 cut(s)	1519
Psp6I	CCWGG	2 cut(s)	246, 1123
PspCI	CACGTG	1 cut(s)	448
PspGI	CCWGG	2 cut(s)	246, 1123
PspN4I	GGNNCC	3 cut(s)	1189, 1521, 1808
PspPI	GGNCC	5 cut(s)	475, 950, 1519, 1550, 1816
PspPPI	RGGWCCY	1 cut(s)	1519
PsuI	RGATCY	2 cut(s)	319, 980
PvuII	CAGCTG	2 cut(s)	427, 840
RsaI	GTAC	3 cut(s)	18, 741, 1808
RsaNI	GTAC	3 cut(s)	17, 740, 1807
RseI	CAYNNNNRTG	1 cut(s)	50
SacI	GAGCTC	1 cut(s)	1883
SaqAI	TTAA	7 cut(s)	212, 714, 1101, 1292, 1364, 1479, 1560
SatI	GCNGC	7 cut(s)	425, 443, 689, 708, 873, 1428, 1799
Sau96I	GGNCC	5 cut(s)	475, 950, 1519, 1550, 1816
SchI	GAGTC	2 cut(s)	202, 1466
ScrFI	CCNGG	3 cut(s)	248, 1125, 1523
SduI	GDGCHC	1 cut(s)	1883
SexAI	ACCWGGT	1 cut(s)	246
SfaNI	GCATC	7 cut(s)	42, 182, 258, 700, 1535, 1638, 1768
SfuI	TTCGAA	1 cut(s)	415
SinI	GGWCC	4 cut(s)	475, 950, 1519, 1816
SmiMI	CAYNNNNRTG	1 cut(s)	50
SmlI	CTYRAG	4 cut(s)	89, 296, 311, 1302
SmoI	CTYRAG	4 cut(s)	89, 296, 311, 1302
SsiI	CCGC	5 cut(s)	13, 989, 1425, 1612, 1836
SspMI	CTAG	2 cut(s)	755, 1695
SstI	GAGCTC	1 cut(s)	1883
StyD4I	CCNGG	3 cut(s)	246, 1123, 1521
TaaI	ACNGT	4 cut(s)	7, 1133, 1377, 1404
TaiI	ACGT	2 cut(s)	450, 1668
TaqI	TCGA	3 cut(s)	21, 415, 1733
TaqII	GACCGA	1 cut(s)	1259
TfiI	GAWTC	9 cut(s)	285, 375, 467, 751, 890, 1084, 1307, 1499, 1601
Tru1I	TTAA	7 cut(s)	212, 714, 1101, 1292, 1364, 1479, 1560
Tru9I	TTAA	7 cut(s)	212, 714, 1101, 1292, 1364, 1479, 1560
TscAI	CASTG	3 cut(s)	211, 262, 1228
TseFI	GTSAC	2 cut(s)	194, 1243
TseI	GCWGC	7 cut(s)	424, 442, 688, 707, 872, 1427, 1798
Tsp45I	GTSAC	2 cut(s)	194, 1243
TspGWI	ACGGA	6 cut(s)	101, 399, 598, 987, 1247, 1837
TspRI	CASTG	3 cut(s)	211, 262, 1228
Van91I	CCANNNNNTGG	1 cut(s)	1687
VpaK11BI	GGWCC	4 cut(s)	475, 950, 1519, 1816
VspI	ATTAAT	1 cut(s)	1101
XapI	RAATTY	3 cut(s)	698, 1453, 1684
XbaI	TCTAGA	1 cut(s)	754
XcmI	CCANNNNNNNNNTGG	2 cut(s)	44, 944
XmiI	GTMKAC	1 cut(s)	69
XmnI	GAANNNNTTC	1 cut(s)	910
XspI	CTAG	2 cut(s)	755, 1695
Zsp2I	ATGCAT	1 cut(s)	943

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.