Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006486

Physical Location & Seq

Genomic Coordinates Reverse (-)

15444053 .. 15447042

Gene Structure 2990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G31920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGACTATGGAGCAAGAAATTGAAGTCTTGGACCAGTTTCCGGTTGGGATGAGAGTTCTTGCTGTTGACGATGACCAGACTTGTCTCCGTATTCTCCAGACTTTGCTTCAGCGCTGCCAATATCACGTTACAACAACGAATCAGGCACAGACCGCATTGGAGTTGTTGAGGGAGAACAAGAATAAGTTTGATCTTGTTATTAGCGATGTCGACATGCCAGACATGGATGGTTTCAAGCTGCTTGAGCTTGTTGGTCTTGAAATGGACTTACCTGTCATAATGTTATCTGCGCATAGCGATCCAAAGTATGTGATGAAAGGAGTCAAGCACGGTGCCTGTGATTATCTGCTTAAACCGGTTCGAATTGAGGAGCTTAAGAACATATGGCAACATGTTGTGAGAAAGAGCAAACTTAAGAAGAATAAGAGCAATGTGAGTAATGGTTCAGGAAACTGTGATAAAGCAAACAGAAAACGTAAAGAACAGTATGAAGAGGAGGAAGAGGAAGAAAGAGGGAATGATAATGATGATCCAACGGCGCAGAAGAAGCCTCGTGTTCTTTGGACGCATGAGCTGCACAATAAATTCCTAGCAGCTGTTGATCATTTAGGCGTTGAGAGAGCTGTTCCAAAAAAGATTCTAGATCTGATGAATGTTGACAAACTCACTAGAGAGAATGTTGCAAGCCACCTTCAGAAATTCCGCGTTGCTCTGAAGAAGGTGTCTGATGACGCCATTCAACAAGCTAACAGGGCGGCTATTGACTCACATTTTATGCAAATGAATTCTCAGAAAGGACTTGGTGGCTTCTACCACCACCACCGCGGAATACCTGTTGGATCCGGTCAGTTCCATGGTGGAACCACAATGATGAGGCATTACTCTTCAAATAGGAATCTTGGTCGTCTGAATTCCCTTGGAGCAGGAATGTTCCAACCAGTCTCATCATCGTTTCCTCGTAACCATAATGATGGAGGAAACATACTTCAGGGTTTGCCGCTAGAAGAGCTTCAGATCAACAACAACATCAACAGGGCTTTTCCAAGCTTTACTTCACAACAAAACTCTCCAATGGTAGCTCCCAGTAATCTGTTACTTCTCGAGGGTAACCCGCAGTCATCATCTTTACCCTCAAACCCGGGTTTTTCTCCTCATTTCGAGATCAGCAAGCGTCTAGAACATTGGTCAAACGCTGCATTGTCAACCAACATTCCACAGAGTGATGTTCATTCAAAACCTGACACCTTGGAATGGAATGCGTTCTGCGACTCAGCTAGTCCGCTAGTAAACCCAAACCTGGATACAAATCCGGCATCTCTCTGCAGAAACACGGGTTTTGGATCCACAAATGCTGCACAAACAGACTTCTTTTATCCATTACAGATGAATCAGCAGCCTGCAAACAACTCAGGTCCAGTGACAGAAGCTCAACTGTTTAGAAGTAGCAATCCAAACGAAGGTTTACTCATGGGACAACAGAAGCTTCAGAGTGGTTTGATGGCTTCTGATGCTGGTTCCTTAGATGATATAGTCAATTCCTTAATGACACAGGAACAGAGCCAATCTGATTTCTCGGAAGGTGATTGGGATTTGGATGGTTTAGCTCACTCGGAACATGCATACGAGAAACTCCATTTTCCCTTTTCTTTGTCAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

552

Amino Acids

61.65

Weight (kDa)

5.84

Isoelectric Point (pI)

47.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	19 - 127	1.1e-26	Response regulator receiver domain
Myb_DNA-binding	PF00249	186 - 234	2.3e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25180 AT4G31920
fragaria_vesca	FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890
malus_domestica	MD08G1059000.v1.1 MD15G1037400.v1.1
prunus_persica	Prupe.1G391400_v2.0.a1 Prupe.1G391400_v2.0.a1
pyrus_communis	pycom08g04890 pycom15g03450 pycom15g03460
rosa_chinensis	RchiOBHm_Chr6g0299681
rosa_laevigata	RLG00000011397
rosa_multiflora	Rmu_co8516769.1_g000001 Rmu_sc0002895.1_g000008
rosa_roxburghii	Rroxscaffold_7G00168450
rosa_rugosa	Rorug06G0291500
rosa_samantha	Rh6AG402300 Rh6BG410800 Rh6CG416600 Rh6DG403700
rosa_wichuraiana	Rw6G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	272
Acc16I	TGCGCA	1 cut(s)	291
AccB1I	GGYRCC	1 cut(s)	332
AccI	GTMKAC	1 cut(s)	210
AccII	CGCG	2 cut(s)	705, 825
AciI	CCGC	8 cut(s)	153, 703, 755, 823, 825, 998, 1112, 1280
AclWI	GGATC	6 cut(s)	293, 524, 834, 847, 1335, 1348
AcsI	RAATTY	4 cut(s)	584, 698, 784, 910
AcuI	CTGAAG	6 cut(s)	92, 677, 734, 971, 995, 1469
AcyI	GRCGYC	1 cut(s)	732
AdeI	CACNNNGTG	1 cut(s)	1220
AfeI	AGCGCT	1 cut(s)	113
AfiI	CCNNNNNNNGG	4 cut(s)	40, 1251, 1297, 1457
AflII	CTTAAG	2 cut(s)	374, 413
AflIII	ACRYGT	1 cut(s)	391
AgeI	ACCGGT	1 cut(s)	355
AgsI	TTSAA	6 cut(s)	23, 235, 260, 740, 888, 1233
AjnI	CCWGG	1 cut(s)	1296
AjuI	GAANNNNNNNTTGG	2 cut(s)	1036, 1068
Alw26I	GTCTC	2 cut(s)	89, 946
AlwI	GGATC	6 cut(s)	293, 524, 834, 847, 1335, 1348
Ama87I	CYCGRG	2 cut(s)	1100, 1138
Aor51HI	AGCGCT	1 cut(s)	113
ApeKI	GCWGC	7 cut(s)	114, 238, 574, 593, 1193, 1352, 1393
ApoI	RAATTY	4 cut(s)	584, 698, 784, 910
AsiGI	ACCGGT	1 cut(s)	355
Asp700I	GAANNNNTTC	2 cut(s)	1008, 1259
AspLEI	GCGC	3 cut(s)	114, 292, 541
AspS9I	GGNCC	2 cut(s)	31, 1412
AsuC2I	CCSGG	2 cut(s)	1139, 1140
AsuHPI	GGTGA	1 cut(s)	1592
AsuII	TTCGAA	1 cut(s)	361
AvaI	CYCGRG	2 cut(s)	1100, 1138
AvaII	GGWCC	2 cut(s)	31, 1412
BamHI	GGATCC	2 cut(s)	839, 1340
BanI	GGYRCC	1 cut(s)	332
BauI	CACGAG	1 cut(s)	552
BbvI	GCAGC	7 cut(s)	101, 225, 561, 605, 1180, 1339, 1405
BccI	CCATC	4 cut(s)	221, 965, 1492, 1589
BceAI	ACGGC	1 cut(s)	552
BciT130I	CCWGG	1 cut(s)	1298
BciVI	GTATCC	1 cut(s)	1294
BclI	TGATCA	1 cut(s)	601
BcnI	CCSGG	2 cut(s)	1139, 1140
BcoDI	GTCTC	2 cut(s)	89, 946
BfaI	CTAG	7 cut(s)	590, 641, 669, 1001, 1175, 1275, 1283
BfmI	CTRYAG	1 cut(s)	1321
BfoI	RGCGCY	1 cut(s)	115
BfrI	CTTAAG	2 cut(s)	374, 413
BfuI	GTATCC	1 cut(s)	1294
BglII	AGATCT	1 cut(s)	643
BisI	GCNGC	9 cut(s)	115, 239, 575, 594, 756, 998, 1194, 1353, 1394
BlsI	GCNGC	9 cut(s)	116, 240, 576, 595, 757, 999, 1195, 1354, 1395
Bme1390I	CCNGG	3 cut(s)	1139, 1140, 1298
Bme18I	GGWCC	2 cut(s)	31, 1412
BmeT110I	CYCGRG	2 cut(s)	1100, 1138
BmgT120I	GGNCC	2 cut(s)	31, 1412
BmiI	GGNNCC	5 cut(s)	334, 841, 862, 1342, 1516
BmrFI	CCNGG	3 cut(s)	1139, 1140, 1298
BmrI	ACTGGG	1 cut(s)	1077
BmsI	GCATC	2 cut(s)	1322, 1498
BmuI	ACTGGG	1 cut(s)	1077
BpmI	CTGGAG	1 cut(s)	80
Bpu14I	TTCGAA	1 cut(s)	361
BpuEI	CTTGAG	1 cut(s)	263
BpuMI	CCSGG	2 cut(s)	1139, 1140
BsaBI	GATNNNNATC	1 cut(s)	1305
BsaHI	GRCGYC	1 cut(s)	732
BsaJI	CCNNGG	5 cut(s)	823, 853, 916, 1138, 1245
BsaWI	WCCGGW	3 cut(s)	40, 355, 842
Bsc4I	CCNNNNNNNGG	4 cut(s)	40, 1251, 1297, 1457
Bse118I	RCCGGY	1 cut(s)	355
Bse1I	ACTGG	4 cut(s)	34, 938, 1083, 1415
Bse3DI	GCAATG	1 cut(s)	436
Bse8I	GATNNNNATC	1 cut(s)	1305
BseBI	CCWGG	1 cut(s)	1298
BseDI	CCNNGG	5 cut(s)	823, 853, 916, 1138, 1245
BseGI	GGATG	3 cut(s)	54, 232, 1600
BseJI	GATNNNNATC	1 cut(s)	1305
BseLI	CCNNNNNNNGG	4 cut(s)	40, 1251, 1297, 1457
BseMI	GCAATG	1 cut(s)	436
BseMII	CTCAG	3 cut(s)	803, 1284, 1422
BseNI	ACTGG	4 cut(s)	34, 938, 1083, 1415
BseRI	GAGGAG	3 cut(s)	383, 509, 1140
BseXI	GCAGC	7 cut(s)	101, 225, 561, 605, 1180, 1339, 1405
BsgI	GTGCAG	2 cut(s)	560, 1338
Bsh1236I	CGCG	2 cut(s)	705, 825
BshNI	GGYRCC	1 cut(s)	332
BshTI	ACCGGT	1 cut(s)	355
BsiHKCI	CYCGRG	2 cut(s)	1100, 1138
BsiSI	CCGG	5 cut(s)	41, 356, 843, 1139, 1310
BslFI	GGGAC	1 cut(s)	1485
BslI	CCNNNNNNNGG	4 cut(s)	40, 1251, 1297, 1457
BsmAI	GTCTC	2 cut(s)	89, 946
BsmFI	GGGAC	1 cut(s)	1485
BsmI	GAATGC	1 cut(s)	1261
BsoBI	CYCGRG	2 cut(s)	1100, 1138
Bsp119I	TTCGAA	1 cut(s)	361
Bsp143I	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
Bsp19I	CCATGG	1 cut(s)	853
BspACI	CCGC	8 cut(s)	153, 703, 755, 823, 825, 998, 1112, 1280
BspCNI	CTCAG	3 cut(s)	802, 1283, 1421
BspFNI	CGCG	2 cut(s)	705, 825
BspLI	GGNNCC	5 cut(s)	334, 841, 862, 1342, 1516
BspMAI	CTGCAG	1 cut(s)	1325
BspPI	GGATC	6 cut(s)	293, 524, 834, 847, 1335, 1348
BspQI	GCTCTTC	1 cut(s)	999
BspT104I	TTCGAA	1 cut(s)	361
BspT107I	GGYRCC	1 cut(s)	332
BspTI	CTTAAG	2 cut(s)	374, 413
BsrDI	GCAATG	1 cut(s)	436
BsrFI	RCCGGY	1 cut(s)	355
BsrI	ACTGG	4 cut(s)	34, 938, 1083, 1415
BssAI	RCCGGY	1 cut(s)	355
BssECI	CCNNGG	5 cut(s)	823, 853, 916, 1138, 1245
BssMI	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
BssNI	GRCGYC	1 cut(s)	732
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	3 cut(s)	853, 916, 1245
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	1 cut(s)	1298
Bst4CI	ACNGT	4 cut(s)	332, 455, 486, 1434
Bst6I	CTCTTC	4 cut(s)	486, 495, 889, 999
BstACI	GRCGYC	1 cut(s)	732
BstAFI	CTTAAG	2 cut(s)	374, 413
BstAPI	GCANNNNNTGC	1 cut(s)	574
BstBI	TTCGAA	1 cut(s)	361
BstC8I	GCNNGC	3 cut(s)	685, 1169, 1398
BstDEI	CTNAG	4 cut(s)	789, 1270, 1408, 1519
BstDSI	CCRYGG	2 cut(s)	823, 853
BstEII	GGTNACC	1 cut(s)	1106
BstF5I	GGATG	3 cut(s)	54, 232, 1600
BstFNI	CGCG	2 cut(s)	705, 825
BstH2I	RGCGCY	1 cut(s)	115
BstHHI	GCGC	3 cut(s)	114, 292, 541
BstKTI	GATC	9 cut(s)	193, 301, 532, 604, 646, 842, 1017, 1164, 1343
BstMAI	GTCTC	2 cut(s)	89, 946
BstMBI	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
BstMWI	GCNNNNNNNGC	7 cut(s)	152, 244, 547, 574, 752, 1006, 1508
BstNI	CCWGG	1 cut(s)	1298
BstNSI	RCATGY	3 cut(s)	217, 395, 1619
BstPI	GGTNACC	1 cut(s)	1106
BstSCI	CCNGG	3 cut(s)	1137, 1138, 1296
BstSFI	CTRYAG	1 cut(s)	1321
BstUI	CGCG	2 cut(s)	705, 825
BstV1I	GCAGC	7 cut(s)	101, 225, 561, 605, 1180, 1339, 1405
BstX2I	RGATCY	3 cut(s)	643, 839, 1340
BstXI	CCANNNNNNTGG	1 cut(s)	971
BstYI	RGATCY	3 cut(s)	643, 839, 1340
BsuI	GTATCC	1 cut(s)	1294
BtgI	CCRYGG	2 cut(s)	823, 853
BtgZI	GCGATG	1 cut(s)	219
BtsCI	GGATG	3 cut(s)	54, 232, 1600
BtsIMutI	CAGTG	1 cut(s)	1422
Cac8I	GCNNGC	3 cut(s)	685, 1169, 1398
CfoI	GCGC	3 cut(s)	114, 292, 541
Cfr10I	RCCGGY	1 cut(s)	355
Cfr13I	GGNCC	2 cut(s)	31, 1412
Cfr42I	CCGCGG	1 cut(s)	826
Cfr9I	CCCGGG	1 cut(s)	1138
CseI	GACGC	3 cut(s)	574, 740, 1160
CspAI	ACCGGT	1 cut(s)	355
CviAII	CATG	7 cut(s)	214, 223, 392, 569, 854, 1468, 1616
DdeI	CTNAG	4 cut(s)	789, 1270, 1408, 1519
DpnI	GATC	9 cut(s)	192, 300, 531, 603, 645, 841, 1016, 1163, 1342
DpnII	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
DraIII	CACNNNGTG	1 cut(s)	1220
DrdI	GACNNNNNNGTC	1 cut(s)	272
DseDI	GACNNNNNNGTC	1 cut(s)	272
Eam1104I	CTCTTC	4 cut(s)	486, 495, 889, 999
EarI	CTCTTC	4 cut(s)	486, 495, 889, 999
Eco130I	CCWWGG	3 cut(s)	853, 916, 1245
Eco47I	GGWCC	2 cut(s)	31, 1412
Eco47III	AGCGCT	1 cut(s)	113
Eco57I	CTGAAG	6 cut(s)	92, 677, 734, 971, 995, 1469
Eco88I	CYCGRG	2 cut(s)	1100, 1138
Eco91I	GGTNACC	1 cut(s)	1106
EcoO65I	GGTNACC	1 cut(s)	1106
EcoRI	GAATTC	2 cut(s)	784, 910
EcoRII	CCWGG	1 cut(s)	1296
EcoT14I	CCWWGG	3 cut(s)	853, 916, 1245
EcoT22I	ATGCAT	1 cut(s)	1621
ErhI	CCWWGG	3 cut(s)	853, 916, 1245
FaeI	CATG	7 cut(s)	217, 226, 395, 572, 857, 1471, 1619
FalI	AAGNNNNNCTT	2 cut(s)	1036, 1068
FaqI	GGGAC	1 cut(s)	1485
FatI	CATG	7 cut(s)	213, 222, 391, 568, 853, 1467, 1615
FauI	CCCGC	1 cut(s)	1119
FauNDI	CATATG	1 cut(s)	383
FbaI	TGATCA	1 cut(s)	601
FblI	GTMKAC	1 cut(s)	210
Fnu4HI	GCNGC	9 cut(s)	115, 239, 575, 594, 756, 998, 1194, 1353, 1394
FokI	GGATG	3 cut(s)	61, 239, 1607
Fsp4HI	GCNGC	9 cut(s)	115, 239, 575, 594, 756, 998, 1194, 1353, 1394
FspBI	CTAG	7 cut(s)	590, 641, 669, 1001, 1175, 1275, 1283
FspI	TGCGCA	1 cut(s)	291
GlaI	GCGC	3 cut(s)	113, 291, 540
GluI	GCNGC	9 cut(s)	115, 239, 575, 594, 756, 998, 1194, 1353, 1394
GsuI	CTGGAG	1 cut(s)	80
HaeII	RGCGCY	1 cut(s)	115
HapII	CCGG	5 cut(s)	41, 356, 843, 1139, 1310
HgaI	GACGC	3 cut(s)	574, 740, 1160
HhaI	GCGC	3 cut(s)	114, 292, 541
Hin1I	GRCGYC	1 cut(s)	732
Hin1II	CATG	7 cut(s)	217, 226, 395, 572, 857, 1471, 1619
Hin6I	GCGC	3 cut(s)	112, 290, 539
HinP1I	GCGC	3 cut(s)	112, 290, 539
HincII	GTYRAC	4 cut(s)	67, 211, 658, 1203
HindII	GTYRAC	4 cut(s)	67, 211, 658, 1203
HindIII	AAGCTT	2 cut(s)	1045, 1481
HinfI	GANTC	7 cut(s)	139, 321, 637, 764, 895, 1268, 1387
HpaII	CCGG	5 cut(s)	41, 356, 843, 1139, 1310
HphI	GGTGA	1 cut(s)	1592
Hpy166II	GTNNAC	6 cut(s)	67, 211, 658, 1203, 1288, 1463
Hpy188III	TCNNGA	7 cut(s)	97, 257, 447, 641, 1100, 1159, 1175
Hpy8I	GTNNAC	6 cut(s)	67, 211, 658, 1203, 1288, 1463
HpyAV	CCTTC	4 cut(s)	701, 712, 1451, 1571
HpyCH4III	ACNGT	4 cut(s)	332, 455, 486, 1434
HpyCH4IV	ACGT	2 cut(s)	126, 475
HpyCH4V	TGCA	8 cut(s)	577, 683, 778, 1196, 1323, 1355, 1400, 1619
HpyF10VI	GCNNNNNNNGC	7 cut(s)	152, 244, 547, 574, 752, 1006, 1508
HpyF3I	CTNAG	4 cut(s)	789, 1270, 1408, 1519
HpySE526I	ACGT	2 cut(s)	126, 475
Hsp92I	GRCGYC	1 cut(s)	732
Hsp92II	CATG	7 cut(s)	217, 226, 395, 572, 857, 1471, 1619
HspAI	GCGC	3 cut(s)	112, 290, 539
Ksp22I	TGATCA	1 cut(s)	601
KspI	CCGCGG	1 cut(s)	826
Kzo9I	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
LguI	GCTCTTC	1 cut(s)	999
LmnI	GCTCC	4 cut(s)	10, 370, 920, 1084
Lsp1109I	GCAGC	7 cut(s)	101, 225, 561, 605, 1180, 1339, 1405
LweI	GCATC	2 cut(s)	1322, 1498
MaeI	CTAG	7 cut(s)	590, 641, 669, 1001, 1175, 1275, 1283
MaeII	ACGT	2 cut(s)	126, 475
MaeIII	GTNAC	5 cut(s)	127, 959, 1092, 1106, 1417
MalI	GATC	9 cut(s)	192, 300, 531, 603, 645, 841, 1016, 1163, 1342
MboI	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
MboII	GAAGA	8 cut(s)	430, 503, 512, 518, 556, 727, 876, 1016
MflI	RGATCY	3 cut(s)	643, 839, 1340
MluCI	AATT	7 cut(s)	18, 363, 584, 698, 784, 910, 1534
MlyI	GAGTC	3 cut(s)	330, 758, 1262
MmeI	TCCRAC	3 cut(s)	557, 817, 958
Mph1103I	ATGCAT	1 cut(s)	1621
MroXI	GAANNNNTTC	2 cut(s)	1008, 1259
MseI	TTAA	4 cut(s)	351, 375, 414, 1541
MslI	CAYNNNNRTG	2 cut(s)	869, 969
MspA1I	CMGCKG	2 cut(s)	596, 825
MspCI	CTTAAG	2 cut(s)	374, 413
MspI	CCGG	5 cut(s)	41, 356, 843, 1139, 1310
MspR9I	CCNGG	3 cut(s)	1139, 1140, 1298
Mva1269I	GAATGC	1 cut(s)	1261
MvaI	CCWGG	1 cut(s)	1298
MvnI	CGCG	2 cut(s)	705, 825
MwoI	GCNNNNNNNGC	7 cut(s)	152, 244, 547, 574, 752, 1006, 1508
NciI	CCSGG	2 cut(s)	1139, 1140
NcoI	CCATGG	1 cut(s)	853
NdeI	CATATG	1 cut(s)	383
NdeII	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
NlaIII	CATG	7 cut(s)	217, 226, 395, 572, 857, 1471, 1619
NlaIV	GGNNCC	5 cut(s)	334, 841, 862, 1342, 1516
NmuCI	GTSAC	1 cut(s)	1417
NsbI	TGCGCA	1 cut(s)	291
NsiI	ATGCAT	1 cut(s)	1621
NspI	RCATGY	3 cut(s)	217, 395, 1619
NspV	TTCGAA	1 cut(s)	361
PaeR7I	CTCGAG	1 cut(s)	1100
PciI	ACATGT	1 cut(s)	391
PciSI	GCTCTTC	1 cut(s)	999
PctI	GAATGC	1 cut(s)	1261
PdmI	GAANNNNTTC	2 cut(s)	1008, 1259
PfeI	GAWTC	4 cut(s)	139, 637, 895, 1387
PinAI	ACCGGT	1 cut(s)	355
PkrI	GCNGC	9 cut(s)	116, 240, 576, 595, 757, 999, 1195, 1354, 1395
PleI	GAGTC	3 cut(s)	329, 758, 1262
PpsI	GAGTC	3 cut(s)	329, 758, 1262
PscI	ACATGT	1 cut(s)	391
Psp6I	CCWGG	1 cut(s)	1296
PspEI	GGTNACC	1 cut(s)	1106
PspGI	CCWGG	1 cut(s)	1296
PspN4I	GGNNCC	5 cut(s)	334, 841, 862, 1342, 1516
PspPI	GGNCC	2 cut(s)	31, 1412
PstI	CTGCAG	1 cut(s)	1325
PsuI	RGATCY	3 cut(s)	643, 839, 1340
PvuII	CAGCTG	1 cut(s)	596
RseI	CAYNNNNRTG	2 cut(s)	869, 969
SacII	CCGCGG	1 cut(s)	826
SalI	GTCGAC	1 cut(s)	209
SapI	GCTCTTC	1 cut(s)	999
SaqAI	TTAA	4 cut(s)	351, 375, 414, 1541
SatI	GCNGC	9 cut(s)	115, 239, 575, 594, 756, 998, 1194, 1353, 1394
Sau3AI	GATC	9 cut(s)	190, 298, 529, 601, 643, 839, 1014, 1161, 1340
Sau96I	GGNCC	2 cut(s)	31, 1412
SchI	GAGTC	3 cut(s)	330, 758, 1262
ScrFI	CCNGG	3 cut(s)	1139, 1140, 1298
SfaNI	GCATC	2 cut(s)	1322, 1498
SfcI	CTRYAG	1 cut(s)	1321
Sfr274I	CTCGAG	1 cut(s)	1100
Sfr303I	CCGCGG	1 cut(s)	826
SfuI	TTCGAA	1 cut(s)	361
SgrBI	CCGCGG	1 cut(s)	826
SinI	GGWCC	2 cut(s)	31, 1412
SlaI	CTCGAG	1 cut(s)	1100
SmaI	CCCGGG	1 cut(s)	1140
SmiMI	CAYNNNNRTG	2 cut(s)	869, 969
SmlI	CTYRAG	4 cut(s)	242, 374, 413, 1100
SmoI	CTYRAG	4 cut(s)	242, 374, 413, 1100
Sse9I	AATT	7 cut(s)	18, 363, 584, 698, 784, 910, 1534
SsiI	CCGC	8 cut(s)	153, 703, 755, 823, 825, 998, 1112, 1280
SspMI	CTAG	7 cut(s)	590, 641, 669, 1001, 1175, 1275, 1283
StyD4I	CCNGG	3 cut(s)	1137, 1138, 1296
StyI	CCWWGG	3 cut(s)	853, 916, 1245
TaaI	ACNGT	4 cut(s)	332, 455, 486, 1434
TaiI	ACGT	2 cut(s)	129, 478
TaqI	TCGA	4 cut(s)	210, 361, 1101, 1158
TasI	AATT	7 cut(s)	18, 363, 584, 698, 784, 910, 1534
TauI	GCSGC	2 cut(s)	758, 1000
TfiI	GAWTC	4 cut(s)	139, 637, 895, 1387
Tru1I	TTAA	4 cut(s)	351, 375, 414, 1541
Tru9I	TTAA	4 cut(s)	351, 375, 414, 1541
TscAI	CASTG	1 cut(s)	1422
TseFI	GTSAC	1 cut(s)	1417
TseI	GCWGC	7 cut(s)	114, 238, 574, 593, 1193, 1352, 1393
Tsp45I	GTSAC	1 cut(s)	1417
TspDTI	ATGAA	6 cut(s)	329, 504, 665, 797, 1217, 1400
TspGWI	ACGGA	1 cut(s)	77
TspMI	CCCGGG	1 cut(s)	1138
TspRI	CASTG	1 cut(s)	1422
Vha464I	CTTAAG	2 cut(s)	374, 413
VpaK11BI	GGWCC	2 cut(s)	31, 1412
XapI	RAATTY	4 cut(s)	584, 698, 784, 910
XbaI	TCTAGA	2 cut(s)	640, 1174
XceI	RCATGY	3 cut(s)	217, 395, 1619
XcmI	CCANNNNNNNNNTGG	1 cut(s)	41
XhoI	CTCGAG	1 cut(s)	1100
XmaI	CCCGGG	1 cut(s)	1138
XmiI	GTMKAC	1 cut(s)	210
XmnI	GAANNNNTTC	2 cut(s)	1008, 1259
XspI	CTAG	7 cut(s)	590, 641, 669, 1001, 1175, 1275, 1283
Zsp2I	ATGCAT	1 cut(s)	1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.