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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G071300_v2.0.a1 |
| pyrus_communis | pycom08g08590 pycom13g21140 |
| rosa_chinensis | RchiOBHm_Chr4g0398731 |
| rosa_laevigata | RLG00000009327 |
| rosa_roxburghii | Rroxscaffold_5G00343680 |
| rosa_rugosa | Rorug04G0011200 |
| rosa_samantha | Rh4AG089000 Rh4BG085900 Rh4CG097000 Rh4DG080600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 355 |
| Acc36I | ACCTGC | 2 cut(s) | 355, 460 |
| AccI | GTMKAC | 1 cut(s) | 388 |
| AciI | CCGC | 3 cut(s) | 287, 293, 417 |
| AcoI | YGGCCR | 1 cut(s) | 83 |
| AcsI | RAATTY | 1 cut(s) | 427 |
| AcuI | CTGAAG | 2 cut(s) | 6, 111 |
| AcvI | CACGTG | 1 cut(s) | 358 |
| AfaI | GTAC | 1 cut(s) | 514 |
| AluBI | AGCT | 3 cut(s) | 117, 242, 301 |
| AluI | AGCT | 3 cut(s) | 117, 242, 301 |
| AoxI | GGCC | 3 cut(s) | 83, 200, 443 |
| ApeKI | GCWGC | 3 cut(s) | 284, 290, 350 |
| ApoI | RAATTY | 1 cut(s) | 427 |
| AseI | ATTAAT | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 1 cut(s) | 336 |
| BalI | TGGCCA | 1 cut(s) | 85 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 505, 537 |
| BauI | CACGAG | 1 cut(s) | 237 |
| BbrPI | CACGTG | 1 cut(s) | 358 |
| BbvCI | CCTCAGC | 1 cut(s) | 57 |
| BbvI | GCAGC | 3 cut(s) | 296, 302, 337 |
| BccI | CCATC | 2 cut(s) | 41, 355 |
| BfaI | CTAG | 1 cut(s) | 110 |
| BfuAI | ACCTGC | 2 cut(s) | 355, 460 |
| BisI | GCNGC | 5 cut(s) | 285, 288, 291, 351, 417 |
| BlsI | GCNGC | 5 cut(s) | 286, 289, 292, 352, 418 |
| BmiI | GGNNCC | 1 cut(s) | 474 |
| BpmI | CTGGAG | 1 cut(s) | 195 |
| Bpu10I | CCTNAGC | 1 cut(s) | 57 |
| BsaAI | YACGTR | 1 cut(s) | 358 |
| Bse1I | ACTGG | 3 cut(s) | 212, 514, 543 |
| BseMII | CTCAG | 1 cut(s) | 71 |
| BseNI | ACTGG | 3 cut(s) | 212, 514, 543 |
| BseRI | GAGGAG | 8 cut(s) | 275, 278, 281, 284, 287, 290, 293, 311 |
| BseXI | GCAGC | 3 cut(s) | 296, 302, 337 |
| BshFI | GGCC | 3 cut(s) | 85, 202, 445 |
| BslFI | GGGAC | 1 cut(s) | 142 |
| BsmFI | GGGAC | 1 cut(s) | 142 |
| BsmI | GAATGC | 1 cut(s) | 332 |
| BsnI | GGCC | 3 cut(s) | 85, 202, 445 |
| Bsp143I | GATC | 3 cut(s) | 106, 481, 534 |
| BspACI | CCGC | 3 cut(s) | 287, 293, 417 |
| BspANI | GGCC | 3 cut(s) | 85, 202, 445 |
| BspCNI | CTCAG | 1 cut(s) | 70 |
| BspLI | GGNNCC | 1 cut(s) | 474 |
| BspMI | ACCTGC | 2 cut(s) | 355, 460 |
| BsrI | ACTGG | 3 cut(s) | 212, 514, 543 |
| BssMI | GATC | 3 cut(s) | 106, 481, 534 |
| BssSI | CACGAG | 1 cut(s) | 237 |
| Bst2BI | CACGAG | 1 cut(s) | 237 |
| Bst4CI | ACNGT | 1 cut(s) | 495 |
| BstBAI | YACGTR | 1 cut(s) | 358 |
| BstC8I | GCNNGC | 2 cut(s) | 63, 115 |
| BstDEI | CTNAG | 1 cut(s) | 57 |
| BstKTI | GATC | 3 cut(s) | 109, 484, 537 |
| BstMBI | GATC | 3 cut(s) | 106, 481, 534 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 290 |
| BstV1I | GCAGC | 3 cut(s) | 296, 302, 337 |
| BsuRI | GGCC | 3 cut(s) | 85, 202, 445 |
| BtsIMutI | CAGTG | 3 cut(s) | 219, 491, 507 |
| BveI | ACCTGC | 2 cut(s) | 355, 460 |
| Cac8I | GCNNGC | 2 cut(s) | 63, 115 |
| Csp6I | GTAC | 1 cut(s) | 513 |
| CviAII | CATG | 1 cut(s) | 317 |
| CviJI | RGCY | 8 cut(s) | 85, 117, 131, 202, 242, 301, 416, 445 |
| CviKI_1 | RGCY | 8 cut(s) | 85, 117, 131, 202, 242, 301, 416, 445 |
| CviQI | GTAC | 1 cut(s) | 513 |
| DdeI | CTNAG | 1 cut(s) | 57 |
| DpnI | GATC | 3 cut(s) | 108, 483, 536 |
| DpnII | GATC | 3 cut(s) | 106, 481, 534 |
| DraI | TTTAAA | 1 cut(s) | 246 |
| EaeI | YGGCCR | 1 cut(s) | 83 |
| Eco32I | GATATC | 1 cut(s) | 9 |
| Eco57I | CTGAAG | 2 cut(s) | 6, 111 |
| Eco72I | CACGTG | 1 cut(s) | 358 |
| EcoRV | GATATC | 1 cut(s) | 9 |
| FaeI | CATG | 1 cut(s) | 320 |
| FaiI | YATR | 5 cut(s) | 38, 93, 318, 442, 500 |
| FaqI | GGGAC | 1 cut(s) | 142 |
| FatI | CATG | 1 cut(s) | 316 |
| FblI | GTMKAC | 1 cut(s) | 388 |
| Fnu4HI | GCNGC | 5 cut(s) | 285, 288, 291, 351, 417 |
| Fsp4HI | GCNGC | 5 cut(s) | 285, 288, 291, 351, 417 |
| FspBI | CTAG | 1 cut(s) | 110 |
| GluI | GCNGC | 5 cut(s) | 285, 288, 291, 351, 417 |
| GsuI | CTGGAG | 1 cut(s) | 195 |
| HaeIII | GGCC | 3 cut(s) | 85, 202, 445 |
| Hin1II | CATG | 1 cut(s) | 320 |
| HindIII | AAGCTT | 1 cut(s) | 115 |
| HphI | GGTGA | 1 cut(s) | 336 |
| Hpy166II | GTNNAC | 1 cut(s) | 389 |
| Hpy188I | TCNGA | 2 cut(s) | 187, 539 |
| Hpy188III | TCNNGA | 4 cut(s) | 48, 176, 476, 485 |
| Hpy8I | GTNNAC | 1 cut(s) | 389 |
| HpyAV | CCTTC | 3 cut(s) | 30, 76, 456 |
| HpyCH4III | ACNGT | 1 cut(s) | 495 |
| HpyCH4IV | ACGT | 1 cut(s) | 357 |
| HpyCH4V | TGCA | 2 cut(s) | 307, 469 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 290 |
| HpyF3I | CTNAG | 1 cut(s) | 57 |
| HpySE526I | ACGT | 1 cut(s) | 357 |
| Hsp92II | CATG | 1 cut(s) | 320 |
| Kzo9I | GATC | 3 cut(s) | 106, 481, 534 |
| LmnI | GCTCC | 1 cut(s) | 298 |
| LpnPI | CCDG | 9 cut(s) | 28, 67, 184, 225, 360, 433, 455, 489, 495 |
| Lsp1109I | GCAGC | 3 cut(s) | 296, 302, 337 |
| MaeI | CTAG | 1 cut(s) | 110 |
| MaeII | ACGT | 1 cut(s) | 357 |
| MaeIII | GTNAC | 1 cut(s) | 342 |
| MalI | GATC | 3 cut(s) | 108, 483, 536 |
| MboI | GATC | 3 cut(s) | 106, 481, 534 |
| MboII | GAAGA | 3 cut(s) | 332, 335, 435 |
| MlsI | TGGCCA | 1 cut(s) | 85 |
| MluCI | AATT | 4 cut(s) | 97, 120, 194, 427 |
| MluNI | TGGCCA | 1 cut(s) | 85 |
| Mox20I | TGGCCA | 1 cut(s) | 85 |
| MscI | TGGCCA | 1 cut(s) | 85 |
| MseI | TTAA | 4 cut(s) | 96, 119, 245, 547 |
| MslI | CAYNNNNRTG | 1 cut(s) | 382 |
| Msp20I | TGGCCA | 1 cut(s) | 85 |
| MspA1I | CMGCKG | 2 cut(s) | 287, 293 |
| Mva1269I | GAATGC | 1 cut(s) | 332 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 290 |
| NdeII | GATC | 3 cut(s) | 106, 481, 534 |
| NlaIII | CATG | 1 cut(s) | 320 |
| NlaIV | GGNNCC | 1 cut(s) | 474 |
| NmuCI | GTSAC | 1 cut(s) | 342 |
| PaqCI | CACCTGC | 1 cut(s) | 355 |
| PctI | GAATGC | 1 cut(s) | 332 |
| PkrI | GCNGC | 5 cut(s) | 286, 289, 292, 352, 418 |
| PmaCI | CACGTG | 1 cut(s) | 358 |
| PmlI | CACGTG | 1 cut(s) | 358 |
| Ppu21I | YACGTR | 1 cut(s) | 358 |
| PshBI | ATTAAT | 1 cut(s) | 96 |
| PspCI | CACGTG | 1 cut(s) | 358 |
| PspN4I | GGNNCC | 1 cut(s) | 474 |
| RsaI | GTAC | 1 cut(s) | 514 |
| RsaNI | GTAC | 1 cut(s) | 513 |
| RseI | CAYNNNNRTG | 1 cut(s) | 382 |
| SaqAI | TTAA | 4 cut(s) | 96, 119, 245, 547 |
| SatI | GCNGC | 5 cut(s) | 285, 288, 291, 351, 417 |
| Sau3AI | GATC | 3 cut(s) | 106, 481, 534 |
| SetI | ASST | 8 cut(s) | 119, 244, 303, 349, 360, 409, 440, 474 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 382 |
| Sse9I | AATT | 4 cut(s) | 97, 120, 194, 427 |
| SsiI | CCGC | 3 cut(s) | 287, 293, 417 |
| SspMI | CTAG | 1 cut(s) | 110 |
| TaaI | ACNGT | 1 cut(s) | 495 |
| TaiI | ACGT | 1 cut(s) | 360 |
| TaqI | TCGA | 2 cut(s) | 49, 486 |
| TasI | AATT | 4 cut(s) | 97, 120, 194, 427 |
| TauI | GCSGC | 2 cut(s) | 290, 419 |
| Tru1I | TTAA | 4 cut(s) | 96, 119, 245, 547 |
| Tru9I | TTAA | 4 cut(s) | 96, 119, 245, 547 |
| TscAI | CASTG | 3 cut(s) | 219, 498, 514 |
| TseFI | GTSAC | 1 cut(s) | 342 |
| TseI | GCWGC | 3 cut(s) | 284, 290, 350 |
| Tsp45I | GTSAC | 1 cut(s) | 342 |
| TspDTI | ATGAA | 1 cut(s) | 333 |
| TspRI | CASTG | 3 cut(s) | 219, 498, 514 |
| VspI | ATTAAT | 1 cut(s) | 96 |
| XapI | RAATTY | 1 cut(s) | 427 |
| XmiI | GTMKAC | 1 cut(s) | 388 |
| XspI | CTAG | 1 cut(s) | 110 |