Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0004202

Physical Location & Seq

Genomic Coordinates Forward (+)

6958759 .. 6962414

Gene Structure 3656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g08660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGGAAAGAAAATTGAATTGCACACGTATAGCGTTTATACCGGTTGCTAGTACCCTTCTTTTTCACTTAAACACTTCTCCGTACAAATCGCCAAATTTCCTCCCGCCATGGAAAGCCTCCATCCCCAACACCTTCCCTCTTTTCCCCCAAACAGAAACTAATCATTTCCCACCACAATCCCCAATTCCCCAAATGTTGCTCCGCCTCTGTTACACAACCCGCCGCCACTGCCTCCACCTCTTCCCCCACCACCACCGTCATCACAATCCCGCCCGCTTGTTTTCCTCTTCCGCTTCCAGAAACGCCGACGAGCCCCCCAACAATCTCAAGAATTCCGACCAAGTCCCGCATCCTCCGTCTGTTATCCACCGCCGCTTAAACCCTCTGTATTCTGTCCCTGGCGCTTCCGCTCTCCCTCGCACCGCCGCCATCGCGCTCTCCGGCGCTCTCGCCTCCGCCCTGATCGCCTTGTACGTCGTCGTTTCGACGGACTGCGACGACAAGTCGTCGAATCCTGTATATAACGGAGTACGACATGCCGTCCTCAAATCCACCGAGTCGTTCAGGAAGTTTCTCCACCACGCTAAACAGACCGGCGTCGCCGCCTCCGTTCTCTGGCACTCTCTCAGCTCCATTTTGTCCTCTGCCAACCACGAGGTCCGCTCCGGCTTCGAGCTCCGGGTCGCTGCGTTCCTTGCCGATATTGCCGCCGCCAATGCCAGCCGAAGGGCCGCCCTTGTTGGGGCTGGAGGTGGCGCCGTTGTCGATTGGCTGCTCGAGTCGGTGGCTGTCCCTAGGGATGGGTGTGGGACCCAGGCCGAGTCGGCTAGAGCTCTCGCCTTCTTGATCTCTGATCCTAATGTGTCCGCCGCCGTGCTCGGCAGGCCCGGCGCTGTTCCCAATCTCTTTAGGTTCATTTTCTCCTGCCAGCCTCATCCGTCTAAGAATCGTGCAAGGCGTAGTTCACTTGATGTTTCTGAAAATTTGAAAGGGAGGAGCATGCTTGTAGCTGCCATTATGGATATCGTCACAGCCAACTGTGATAGTTTAGAAAAAGTGTCCTTGAAGCCATTCCTGTCGGCGAATGCTGAAACGCAGGATATAGCAGCTGCCATTCAAGTTATTGAAGAAGGTGGCATGCGTTTGGACGAGTCACATGAAAATGAAGATGACGAAGATGGTGACAGTGGAATCAAGGGGATTGGTATTAAAGTTCTCGGGGGTACATCAGTTTTAGGCCTATCAAGAAAAAATGGAGTTGTGAAGCTGGGAAGTGCTGATACTAGTGAGTTGGGATCTGGAAGGGTTAATCCTCATAATCTTGTCCTGCAAAATATGCATGCCAGTTCTCTAGCACAGAGTAATCTGTCTTCTGCTGTTGTTCCTGGCCTCTGGGATGATTTGAATTGTCAACATGTTGCTGTTCCTTTTGCTACATGGGCATTGGCAAACTGGGCGATGGCATCAGAAGTGAATAGGTCACGAATACAGGAACTGGATGCAGATGGGCAAGCTATTATGACTGCTTTAATGGCGCCTGAGAGATCAGTCAAATGGCACGGAAGTTTGGTGGCTCGGTTGCTATTAGAGGATCAGAATCTACCCCTGAACGATTCAGTTTCTGATTGGAGTTCCAGTCTTCTTTCTACTGTTTCTCAGGCAACTAAAAACGAAGACATTCCTTTGGCTCGGGTGGCTTTGTCAGCATTCTTGATTTCTGTTGAGAGGAGCCCTGAAGCGCGGAAGATAGTGATGGAAAAGGGTCTTCATCTGATAAGAGACATTGCGAAGCGAACGATGAAGCATAATGATGTGCAAGAAGCATTGTCAAGGGCATTGGAATTGCTTTGTTCTGGGGACTTGCATTTACCTCTTGAAGAAGGCCAAAGGTGGTCTGCTGTATTACTTTGTTGGGTGTTTGGAAAACCTTCTTCTGACACATTACGTTTGTCAGCGATAAAAATCCTTTCTAGCATTCTCGAAGACTATGGACCATACTCTGTACCCATTTCTCAGGGATGGTTAGCTATTCTACTTACTGAAATTCTCACTTTGAAAAAGGCATCAGTTAAAGGAACCCCTCAGGCTAGATCTGTGAATGTGAAGACACAAATTGATCAGTCAAACATGCTTTTTGCTGCACAGACTTCTAATCAGTTATTGGCAGCTGTTGTTAATCTAGCAGGAAATCAGCTGGGAACAACCACTGATTCTATTGATACATTTCCACTGGCAGATCTTCTGTCCGCTGAACCTTTTTCTGGGCCATTTAAAACCCTAAAGAAAGATAGTTTGCCTAAGGTTAATGCGGCAGATTCTGCAGTGGCAACTCTGAAGGGAATCAAAGCACTGACTGAAGTTTGTGCTGACGATTCTTTATGTCAGGAGAAACTAACAGATTTTGGAGTCTTAAGTTTGCTGAGACGGTTTTTGTTATGTGATGATTATGAGAAATTTGCTGCCATAGAAGCGTATGATGCTTCTAAGACGCTTGAGGCACAAGAGCGAACCTCCTATGTTTCTAAAGAGTCATCTATTCCAGATAGTAATGGTCAATCTAGTGTCCAAGTTCCACCCACAGCTCACATCCGTAGGCATGCAGCGAGGCTCTTGACTATTCTTTCAATACATCCAAAAGTCCAGAGAGTCATAATAGCAGATAAAACTTGGTGTAAATGGCTTGAGGATTGTGCTAACGGTAAGATCGATCAGGTTGTAGTGATCTTAAAATTCAAAGTTATGCTAGAAAAACACTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

920

Amino Acids

99.8

Weight (kDa)

8.09

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34310 AT4G34310 AT4G34310 AT4G34310 AT4G34310 AT4G34310 AT4G34310 AT4G34310 AT4G34310 AT4G34310
fragaria_vesca	FvH4_2g34840 FvH4_2g34840 FvH4_2g34840 FvH4_2g34840 FvH4_2g34840 FvH4_2g34840
malus_domestica	MD08G1105600.v1.1 MD15G1086600.v1.1
prunus_persica	Prupe.1G440200_v2.0.a1
pyrus_communis	pycom08g08660 pycom15g08150
rosa_chinensis	RchiOBHm_Chr6g0307221
rosa_laevigata	RLG00000010726
rosa_multiflora	Rmu_sc0000255.1_g000029 Rmu_sc0000547.1_g000019 Rmu_sc0001436.1_g000013
rosa_roxburghii	Rroxscaffold_7G00161070
rosa_rugosa	Rorug06G0357800
rosa_samantha	Rh6AG468400 Rh6BG432100 Rh6CG483600 Rh6DG470200
rosa_wichuraiana	Rw6G040810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2758
AccB1I	GGYRCC	2 cut(s)	755, 1534
AccBSI	CCGCTC	2 cut(s)	410, 663
AccII	CGCG	2 cut(s)	434, 1741
AclWI	GGATC	3 cut(s)	848, 1303, 1599
AcsI	RAATTY	6 cut(s)	94, 331, 982, 2043, 2453, 2729
AcuI	CTGAAG	3 cut(s)	1755, 2354, 2376
AcyI	GRCGYC	3 cut(s)	597, 756, 1535
AfaI	GTAC	6 cut(s)	52, 83, 473, 531, 1225, 2004
AfiI	CCNNNNNNNGG	6 cut(s)	615, 726, 741, 742, 800, 2261
AflII	CTTAAG	1 cut(s)	2410
AflIII	ACRYGT	2 cut(s)	23, 1414
AgeI	ACCGGT	1 cut(s)	40
AhdI	GACNNNNNGTC	3 cut(s)	502, 505, 539
AhlI	ACTAGT	1 cut(s)	1283
AjnI	CCWGG	3 cut(s)	397, 813, 1384
Alw21I	GWGCWC	3 cut(s)	678, 835, 879
Alw26I	GTCTC	2 cut(s)	1773, 2416
AlwI	GGATC	3 cut(s)	848, 1303, 1599
AlwNI	CAGNNNCTG	3 cut(s)	1495, 1622, 2318
Ama87I	CYCGRG	3 cut(s)	776, 1217, 1689
AoxI	GGCC	7 cut(s)	729, 816, 884, 1237, 1387, 1882, 2264
ApeKI	GCWGC	9 cut(s)	686, 772, 1010, 1106, 1109, 2138, 2165, 2459, 2600
ApoI	RAATTY	6 cut(s)	94, 331, 982, 2043, 2453, 2729
AsiGI	ACCGGT	1 cut(s)	40
Asp700I	GAANNNNTTC	3 cut(s)	1070, 1677, 1927
AspA2I	CCTAGG	1 cut(s)	794
AspLEI	GCGC	7 cut(s)	404, 436, 446, 758, 893, 1537, 1741
AspS9I	GGNCC	6 cut(s)	658, 729, 810, 885, 1991, 2264
AsuC2I	CCSGG	2 cut(s)	680, 888
AsuHPI	GGTGA	1 cut(s)	1193
AvaI	CYCGRG	3 cut(s)	776, 1217, 1689
AvaII	GGWCC	3 cut(s)	658, 810, 1991
AvrII	CCTAGG	1 cut(s)	794
AxyI	CCTNAGG	2 cut(s)	2082, 2298
BaeI	ACNNNNGTAYC	2 cut(s)	1215, 1248
BanI	GGYRCC	2 cut(s)	755, 1534
BanII	GRGCYC	4 cut(s)	315, 678, 835, 1733
BarI	GAAGNNNNNNTAC	4 cut(s)	1264, 1296, 1354, 1386
BauI	CACGAG	1 cut(s)	653
BbsI	GAAGAC	6 cut(s)	1362, 1631, 1680, 1757, 1989, 2111
Bbv12I	GWGCWC	3 cut(s)	678, 835, 879
BbvI	GCAGC	9 cut(s)	673, 759, 997, 1096, 1118, 2125, 2177, 2446, 2612
BccI	CCATC	8 cut(s)	128, 437, 794, 1172, 1453, 1499, 1747, 2013
BceAI	ACGGC	3 cut(s)	524, 743, 857
BciT130I	CCWGG	3 cut(s)	399, 815, 1386
BclI	TGATCA	1 cut(s)	2116
BcnI	CCSGG	2 cut(s)	680, 888
BcoDI	GTCTC	2 cut(s)	1773, 2416
BcuI	ACTAGT	1 cut(s)	1283
BfmI	CTRYAG	1 cut(s)	2319
BfoI	RGCGCY	5 cut(s)	405, 447, 759, 894, 1538
BfrI	CTTAAG	1 cut(s)	2410
BglI	GCCNNNNNGGC	1 cut(s)	824
BglII	AGATCT	2 cut(s)	2090, 2236
BlnI	CCTAGG	1 cut(s)	794
Bme1390I	CCNGG	5 cut(s)	399, 680, 815, 888, 1386
Bme18I	GGWCC	3 cut(s)	658, 810, 1991
BmeRI	GACNNNNNGTC	3 cut(s)	502, 505, 539
BmeT110I	CYCGRG	3 cut(s)	776, 1217, 1689
BmgT120I	GGNCC	6 cut(s)	658, 729, 810, 885, 1991, 2264
BmiI	GGNNCC	6 cut(s)	757, 811, 812, 1536, 1730, 2077
BmrFI	CCNGG	5 cut(s)	399, 680, 815, 888, 1386
BmrI	ACTGGG	1 cut(s)	1462
BmsI	GCATC	5 cut(s)	358, 1472, 1489, 2072, 2467
BmuI	ACTGGG	1 cut(s)	1462
BoxI	GACNNNNGTC	1 cut(s)	596
BpiI	GAAGAC	6 cut(s)	1362, 1631, 1680, 1757, 1989, 2111
BplI	GAGNNNNNCTC	4 cut(s)	647, 679, 2495, 2527
BpmI	CTGGAG	1 cut(s)	768
BpuEI	CTTGAG	3 cut(s)	311, 2513, 2702
BpuMI	CCSGG	2 cut(s)	680, 888
Bsa29I	ATCGAT	1 cut(s)	2706
BsaAI	YACGTR	1 cut(s)	26
BsaBI	GATNNNNATC	2 cut(s)	1596, 1961
BsaHI	GRCGYC	3 cut(s)	597, 756, 1535
BsaJI	CCNNGG	4 cut(s)	107, 397, 794, 813
BsaWI	WCCGGW	1 cut(s)	40
BsaXI	ACNNNNNCTCC	2 cut(s)	1621, 1651
Bsc4I	CCNNNNNNNGG	6 cut(s)	615, 726, 741, 742, 800, 2261
Bse118I	RCCGGY	2 cut(s)	40, 593
Bse1I	ACTGG	5 cut(s)	1344, 1457, 1500, 1635, 2235
Bse21I	CCTNAGG	2 cut(s)	2082, 2298
Bse3DI	GCAATG	1 cut(s)	1782
Bse8I	GATNNNNATC	2 cut(s)	1596, 1961
BseBI	CCWGG	3 cut(s)	399, 815, 1386
BseCI	ATCGAT	1 cut(s)	2706
BseDI	CCNNGG	4 cut(s)	107, 397, 794, 813
BseGI	GGATG	9 cut(s)	120, 349, 805, 934, 1402, 1504, 2024, 2586, 2629
BseJI	GATNNNNATC	2 cut(s)	1596, 1961
BseLI	CCNNNNNNNGG	6 cut(s)	615, 726, 741, 742, 800, 2261
BseMI	GCAATG	1 cut(s)	1782
BseMII	CTCAG	6 cut(s)	640, 1530, 1670, 2027, 2096, 2411
BseNI	ACTGG	5 cut(s)	1344, 1457, 1500, 1635, 2235
BseRI	GAGGAG	2 cut(s)	1009, 1741
BseXI	GCAGC	9 cut(s)	673, 759, 997, 1096, 1118, 2125, 2177, 2446, 2612
BseYI	CCCAGC	2 cut(s)	1267, 2194
BsgI	GTGCAG	1 cut(s)	2124
Bsh1236I	CGCG	2 cut(s)	434, 1741
BshFI	GGCC	7 cut(s)	731, 818, 886, 1239, 1389, 1884, 2266
BshNI	GGYRCC	2 cut(s)	755, 1534
BshTI	ACCGGT	1 cut(s)	40
BshVI	ATCGAT	1 cut(s)	2706
BsiHKAI	GWGCWC	3 cut(s)	678, 835, 879
BsiHKCI	CYCGRG	3 cut(s)	776, 1217, 1689
BsiSI	CCGG	6 cut(s)	41, 441, 594, 666, 679, 888
BslFI	GGGAC	5 cut(s)	329, 380, 776, 823, 1871
BslI	CCNNNNNNNGG	6 cut(s)	615, 726, 741, 742, 800, 2261
BsmAI	GTCTC	2 cut(s)	1773, 2416
BsmBI	CGTCTC	1 cut(s)	2416
BsmFI	GGGAC	5 cut(s)	329, 380, 776, 823, 1871
BsmI	GAATGC	3 cut(s)	1090, 1706, 1974
BsnI	GGCC	7 cut(s)	731, 818, 886, 1239, 1389, 1884, 2266
BsoBI	CYCGRG	3 cut(s)	776, 1217, 1689
Bsp1286I	GDGCHC	5 cut(s)	315, 678, 835, 879, 1733
Bsp19I	CCATGG	1 cut(s)	107
BspANI	GGCC	7 cut(s)	731, 818, 886, 1239, 1389, 1884, 2266
BspCNI	CTCAG	6 cut(s)	639, 1531, 1669, 2026, 2095, 2412
BspDI	ATCGAT	1 cut(s)	2706
BspFNI	CGCG	2 cut(s)	434, 1741
BspLI	GGNNCC	6 cut(s)	757, 811, 812, 1536, 1730, 2077
BspMAI	CTGCAG	1 cut(s)	2323
BspPI	GGATC	3 cut(s)	848, 1303, 1599
BspT107I	GGYRCC	2 cut(s)	755, 1534
BspTI	CTTAAG	1 cut(s)	2410
BsrBI	CCGCTC	2 cut(s)	410, 663
BsrDI	GCAATG	1 cut(s)	1782
BsrFI	RCCGGY	2 cut(s)	40, 593
BsrI	ACTGG	5 cut(s)	1344, 1457, 1500, 1635, 2235
BssAI	RCCGGY	2 cut(s)	40, 593
BssECI	CCNNGG	4 cut(s)	107, 397, 794, 813
BssNI	GRCGYC	3 cut(s)	597, 756, 1535
BssSI	CACGAG	1 cut(s)	653
BssT1I	CCWWGG	2 cut(s)	107, 794
Bst2BI	CACGAG	1 cut(s)	653
Bst2UI	CCWGG	3 cut(s)	399, 815, 1386
Bst4CI	ACNGT	6 cut(s)	257, 1040, 1187, 1651, 2427, 2699
Bst6I	CTCTTC	2 cut(s)	245, 292
BstACI	GRCGYC	3 cut(s)	597, 756, 1535
BstAFI	CTTAAG	1 cut(s)	2410
BstAPI	GCANNNNNTGC	2 cut(s)	1336, 2318
BstBAI	YACGTR	1 cut(s)	26
BstC8I	GCNNGC	9 cut(s)	274, 721, 884, 929, 1001, 1139, 1341, 1512, 2598
BstDEI	CTNAG	9 cut(s)	626, 942, 1539, 1656, 2013, 2082, 2298, 2420, 2484
BstDSI	CCRYGG	1 cut(s)	107
BstF5I	GGATG	9 cut(s)	120, 349, 805, 934, 1402, 1504, 2024, 2586, 2629
BstFNI	CGCG	2 cut(s)	434, 1741
BstH2I	RGCGCY	5 cut(s)	405, 447, 759, 894, 1538
BstHHI	GCGC	7 cut(s)	404, 436, 446, 758, 893, 1537, 1741
BstMAI	GTCTC	2 cut(s)	1773, 2416
BstNI	CCWGG	3 cut(s)	399, 815, 1386
BstNSI	RCATGY	7 cut(s)	539, 1003, 1141, 1343, 1418, 2131, 2600
BstPAI	GACNNNNGTC	1 cut(s)	596
BstSCI	CCNGG	5 cut(s)	397, 678, 813, 886, 1384
BstSFI	CTRYAG	1 cut(s)	2319
BstUI	CGCG	2 cut(s)	434, 1741
BstV1I	GCAGC	9 cut(s)	673, 759, 997, 1096, 1118, 2125, 2177, 2446, 2612
BstV2I	GAAGAC	6 cut(s)	1362, 1631, 1680, 1757, 1989, 2111
BstX2I	RGATCY	3 cut(s)	1295, 2090, 2236
BstYI	RGATCY	3 cut(s)	1295, 2090, 2236
Bsu15I	ATCGAT	1 cut(s)	2706
Bsu36I	CCTNAGG	2 cut(s)	2082, 2298
BsuRI	GGCC	7 cut(s)	731, 818, 886, 1239, 1389, 1884, 2266
BsuTUI	ATCGAT	1 cut(s)	2706
BtgI	CCRYGG	1 cut(s)	107
BtgZI	GCGATG	2 cut(s)	415, 1472
BtsCI	GGATG	9 cut(s)	120, 349, 805, 934, 1402, 1504, 2024, 2586, 2629
BtsI	GCAGTG	2 cut(s)	226, 2328
BtsIMutI	CAGTG	6 cut(s)	226, 1192, 2205, 2228, 2328, 2348
Cac8I	GCNNGC	9 cut(s)	274, 721, 884, 929, 1001, 1139, 1341, 1512, 2598
CaiI	CAGNNNCTG	3 cut(s)	1495, 1622, 2318
CfoI	GCGC	7 cut(s)	404, 436, 446, 758, 893, 1537, 1741
Cfr10I	RCCGGY	2 cut(s)	40, 593
Cfr13I	GGNCC	6 cut(s)	658, 729, 810, 885, 1991, 2264
ClaI	ATCGAT	1 cut(s)	2706
CseI	GACGC	2 cut(s)	586, 2497
Csp6I	GTAC	6 cut(s)	51, 82, 472, 530, 1224, 2003
CspAI	ACCGGT	1 cut(s)	40
CviQI	GTAC	6 cut(s)	51, 82, 472, 530, 1224, 2003
DdeI	CTNAG	9 cut(s)	626, 942, 1539, 1656, 2013, 2082, 2298, 2420, 2484
DinI	GGCGCC	2 cut(s)	757, 1536
DraI	TTTAAA	1 cut(s)	2272
DriI	GACNNNNNGTC	3 cut(s)	502, 505, 539
Eam1104I	CTCTTC	2 cut(s)	245, 292
Eam1105I	GACNNNNNGTC	3 cut(s)	502, 505, 539
EarI	CTCTTC	2 cut(s)	245, 292
EciI	GGCGGA	3 cut(s)	191, 445, 856
Ecl136II	GAGCTC	2 cut(s)	676, 833
Eco130I	CCWWGG	2 cut(s)	107, 794
Eco147I	AGGCCT	1 cut(s)	1239
Eco24I	GRGCYC	4 cut(s)	315, 678, 835, 1733
Eco32I	GATATC	1 cut(s)	1024
Eco47I	GGWCC	3 cut(s)	658, 810, 1991
Eco53kI	GAGCTC	2 cut(s)	676, 833
Eco57I	CTGAAG	3 cut(s)	1755, 2354, 2376
Eco81I	CCTNAGG	2 cut(s)	2082, 2298
Eco88I	CYCGRG	3 cut(s)	776, 1217, 1689
EcoICRI	GAGCTC	2 cut(s)	676, 833
EcoO109I	RGGNCCY	1 cut(s)	810
EcoRI	GAATTC	1 cut(s)	331
EcoRII	CCWGG	3 cut(s)	397, 813, 1384
EcoRV	GATATC	1 cut(s)	1024
EcoT14I	CCWWGG	2 cut(s)	107, 794
EcoT22I	ATGCAT	1 cut(s)	1341
EcoT38I	GRGCYC	4 cut(s)	315, 678, 835, 1733
EgeI	GGCGCC	2 cut(s)	757, 1536
EheI	GGCGCC	2 cut(s)	757, 1536
ErhI	CCWWGG	2 cut(s)	107, 794
Esp3I	CGTCTC	1 cut(s)	2416
FaqI	GGGAC	5 cut(s)	329, 380, 776, 823, 1871
FauI	CCCGC	5 cut(s)	111, 227, 277, 281, 354
FbaI	TGATCA	1 cut(s)	2116
FokI	GGATG	9 cut(s)	107, 336, 812, 921, 1409, 1511, 2031, 2573, 2616
FriOI	GRGCYC	4 cut(s)	315, 678, 835, 1733
GlaI	GCGC	7 cut(s)	403, 435, 445, 757, 892, 1536, 1740
GsaI	CCCAGC	2 cut(s)	1271, 2198
GsuI	CTGGAG	1 cut(s)	768
HaeII	RGCGCY	5 cut(s)	405, 447, 759, 894, 1538
HaeIII	GGCC	7 cut(s)	731, 818, 886, 1239, 1389, 1884, 2266
HapII	CCGG	6 cut(s)	41, 441, 594, 666, 679, 888
HgaI	GACGC	2 cut(s)	586, 2497
HhaI	GCGC	7 cut(s)	404, 436, 446, 758, 893, 1537, 1741
Hin1I	GRCGYC	3 cut(s)	597, 756, 1535
Hin6I	GCGC	7 cut(s)	402, 434, 444, 756, 891, 1535, 1739
HinP1I	GCGC	7 cut(s)	402, 434, 444, 756, 891, 1535, 1739
HincII	GTYRAC	1 cut(s)	1412
HindII	GTYRAC	1 cut(s)	1412
HpaII	CCGG	6 cut(s)	41, 441, 594, 666, 679, 888
HphI	GGTGA	1 cut(s)	1193
Hpy166II	GTNNAC	2 cut(s)	965, 1412
Hpy188I	TCNGA	9 cut(s)	337, 853, 979, 1468, 1596, 1624, 1773, 1936, 2334
Hpy8I	GTNNAC	2 cut(s)	965, 1412
Hpy99I	CGWCG	7 cut(s)	311, 479, 482, 490, 500, 511, 602
HpyAV	CCTTC	9 cut(s)	65, 142, 720, 850, 1124, 1296, 1874, 1938, 2329
HpyCH4III	ACNGT	6 cut(s)	257, 1040, 1187, 1651, 2427, 2699
HpyCH4IV	ACGT	3 cut(s)	25, 474, 1945
HpyF3I	CTNAG	9 cut(s)	626, 942, 1539, 1656, 2013, 2082, 2298, 2420, 2484
HpySE526I	ACGT	3 cut(s)	25, 474, 1945
Hsp92I	GRCGYC	3 cut(s)	597, 756, 1535
HspAI	GCGC	7 cut(s)	402, 434, 444, 756, 891, 1535, 1739
KasI	GGCGCC	2 cut(s)	755, 1534
KflI	GGGWCCC	1 cut(s)	810
Ksp22I	TGATCA	1 cut(s)	2116
LmnI	GCTCC	6 cut(s)	204, 635, 668, 681, 996, 1728
Lsp1109I	GCAGC	9 cut(s)	673, 759, 997, 1096, 1118, 2125, 2177, 2446, 2612
LweI	GCATC	5 cut(s)	358, 1472, 1489, 2072, 2467
MaeII	ACGT	3 cut(s)	25, 474, 1945
MaeIII	GTNAC	5 cut(s)	209, 1027, 1152, 1181, 1479
MbiI	CCGCTC	2 cut(s)	410, 663
MflI	RGATCY	3 cut(s)	1295, 2090, 2236
MhlI	GDGCHC	5 cut(s)	315, 678, 835, 879, 1733
Mly113I	GGCGCC	2 cut(s)	756, 1535
MlyI	GAGTC	7 cut(s)	566, 788, 830, 1160, 2415, 2537, 2655
MmeI	TCCRAC	1 cut(s)	360
Mph1103I	ATGCAT	1 cut(s)	1341
MroXI	GAANNNNTTC	3 cut(s)	1070, 1677, 1927
MslI	CAYNNNNRTG	2 cut(s)	1161, 1809
MspA1I	CMGCKG	4 cut(s)	1109, 2168, 2194, 2249
MspCI	CTTAAG	1 cut(s)	2410
MspI	CCGG	6 cut(s)	41, 441, 594, 666, 679, 888
MspR9I	CCNGG	5 cut(s)	399, 680, 815, 888, 1386
Mva1269I	GAATGC	3 cut(s)	1090, 1706, 1974
MvaI	CCWGG	3 cut(s)	399, 815, 1386
MvnI	CGCG	2 cut(s)	434, 1741
NarI	GGCGCC	2 cut(s)	756, 1535
NciI	CCSGG	2 cut(s)	680, 888
NcoI	CCATGG	1 cut(s)	107
NlaIV	GGNNCC	6 cut(s)	757, 811, 812, 1536, 1730, 2077
NmeAIII	GCCGAG	2 cut(s)	844, 858
NmuCI	GTSAC	4 cut(s)	1027, 1152, 1181, 1479
NsiI	ATGCAT	1 cut(s)	1341
NspI	RCATGY	7 cut(s)	539, 1003, 1141, 1343, 1418, 2131, 2600
PaeI	GCATGC	4 cut(s)	1003, 1141, 1343, 2600
PaeR7I	CTCGAG	1 cut(s)	776
PceI	AGGCCT	1 cut(s)	1239
PciI	ACATGT	1 cut(s)	1414
PcsI	WCGNNNNNNNCGW	4 cut(s)	471, 606, 955, 2703
PctI	GAATGC	3 cut(s)	1090, 1706, 1974
PdmI	GAANNNNTTC	3 cut(s)	1070, 1677, 1927
PfeI	GAWTC	9 cut(s)	511, 946, 1191, 1597, 1613, 2210, 2315, 2340, 2372
PflFI	GACNNNGTC	1 cut(s)	341
PinAI	ACCGGT	1 cut(s)	40
PleI	GAGTC	7 cut(s)	565, 787, 829, 1159, 2414, 2536, 2654
PluTI	GGCGCC	2 cut(s)	759, 1538
PpsI	GAGTC	7 cut(s)	565, 787, 829, 1159, 2414, 2536, 2654
Ppu21I	YACGTR	1 cut(s)	26
PpuMI	RGGWCCY	1 cut(s)	810
PscI	ACATGT	1 cut(s)	1414
PshAI	GACNNNNGTC	1 cut(s)	596
PsiI	TTATAA	1 cut(s)	2758
Psp124BI	GAGCTC	2 cut(s)	678, 835
Psp5II	RGGWCCY	1 cut(s)	810
Psp6I	CCWGG	3 cut(s)	397, 813, 1384
PspFI	CCCAGC	2 cut(s)	1267, 2194
PspGI	CCWGG	3 cut(s)	397, 813, 1384
PspN4I	GGNNCC	6 cut(s)	757, 811, 812, 1536, 1730, 2077
PspPI	GGNCC	6 cut(s)	658, 729, 810, 885, 1991, 2264
PspPPI	RGGWCCY	1 cut(s)	810
PspXI	VCTCGAGB	1 cut(s)	776
PstI	CTGCAG	1 cut(s)	2323
PstNI	CAGNNNCTG	3 cut(s)	1495, 1622, 2318
PsuI	RGATCY	3 cut(s)	1295, 2090, 2236
PsyI	GACNNNGTC	1 cut(s)	341
PvuII	CAGCTG	3 cut(s)	1109, 2168, 2194
RsaI	GTAC	6 cut(s)	52, 83, 473, 531, 1225, 2004
RsaNI	GTAC	6 cut(s)	51, 82, 472, 530, 1224, 2003
RseI	CAYNNNNRTG	2 cut(s)	1161, 1809
SacI	GAGCTC	2 cut(s)	678, 835
Sau96I	GGNCC	6 cut(s)	658, 729, 810, 885, 1991, 2264
SchI	GAGTC	7 cut(s)	566, 788, 830, 1160, 2415, 2537, 2655
ScrFI	CCNGG	5 cut(s)	399, 680, 815, 888, 1386
SduI	GDGCHC	5 cut(s)	315, 678, 835, 879, 1733
SfaNI	GCATC	5 cut(s)	358, 1472, 1489, 2072, 2467
SfcI	CTRYAG	1 cut(s)	2319
SfoI	GGCGCC	2 cut(s)	757, 1536
Sfr274I	CTCGAG	1 cut(s)	776
SinI	GGWCC	3 cut(s)	658, 810, 1991
SlaI	CTCGAG	1 cut(s)	776
SmiMI	CAYNNNNRTG	2 cut(s)	1161, 1809
SmlI	CTYRAG	5 cut(s)	326, 776, 2410, 2492, 2681
SmoI	CTYRAG	5 cut(s)	326, 776, 2410, 2492, 2681
SpeI	ACTAGT	1 cut(s)	1283
SphI	GCATGC	4 cut(s)	1003, 1141, 1343, 2600
SseBI	AGGCCT	1 cut(s)	1239
SspDI	GGCGCC	2 cut(s)	755, 1534
SstI	GAGCTC	2 cut(s)	678, 835
StuI	AGGCCT	1 cut(s)	1239
StyD4I	CCNGG	5 cut(s)	397, 678, 813, 886, 1384
StyI	CCWWGG	2 cut(s)	107, 794
TaaI	ACNGT	6 cut(s)	257, 1040, 1187, 1651, 2427, 2699
TaiI	ACGT	3 cut(s)	28, 477, 1948
TaqI	TCGA	7 cut(s)	485, 509, 672, 765, 777, 1980, 2706
TauI	GCSGC	9 cut(s)	225, 375, 428, 605, 710, 713, 734, 872, 2312
TfiI	GAWTC	9 cut(s)	511, 946, 1191, 1597, 1613, 2210, 2315, 2340, 2372
TscAI	CASTG	6 cut(s)	233, 1192, 2212, 2235, 2328, 2355
TseFI	GTSAC	4 cut(s)	1027, 1152, 1181, 1479
TseI	GCWGC	9 cut(s)	686, 772, 1010, 1106, 1109, 2138, 2165, 2459, 2600
Tsp45I	GTSAC	4 cut(s)	1027, 1152, 1181, 1479
TspDTI	ATGAA	5 cut(s)	904, 1173, 1179, 1757, 1814
TspGWI	ACGGA	8 cut(s)	69, 345, 503, 540, 598, 927, 1575, 2579
TspRI	CASTG	6 cut(s)	233, 1192, 2212, 2235, 2328, 2355
Tth111I	GACNNNGTC	1 cut(s)	341
Vha464I	CTTAAG	1 cut(s)	2410
VpaK11BI	GGWCC	3 cut(s)	658, 810, 1991
XapI	RAATTY	6 cut(s)	94, 331, 982, 2043, 2453, 2729
XceI	RCATGY	7 cut(s)	539, 1003, 1141, 1343, 1418, 2131, 2600
XhoI	CTCGAG	1 cut(s)	776
XmaJI	CCTAGG	1 cut(s)	794
XmnI	GAANNNNTTC	3 cut(s)	1070, 1677, 1927
Zsp2I	ATGCAT	1 cut(s)	1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.