RchiOBHm_Chr6g0307221

phosphatidylglycerol acyl-chain remodeling

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
65703708 .. 65710402
6695 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27622

Sequence Viewer

Length: 3681 bp
ATGATGCTCCGTCTCTGCCACAGAACCCGTCGCTACTGCTATCACCTCTTCCCTCACCACCACCGTCACCCCCGCCCCCTTTCCTCCTCCGCCTCCAGAAACCCCATCGAACCCCCCAACAATCTCAAAAATGCCAACCAAGTCCCTCCGCCACCGCCAATTCTCCACCGCCGCTCCAGCCCTATCTTCCCTGTCCCCACCGCCTCCCTCTCCCGCAACACCGTCCTCGGCCTCACCGCCGCGATCGCCTCAGTCGCAATCGCCTCCTACGCCGTCGTCGCCGTTACCGATTCCGACGACAAGTCGTTCAATCCTCTCTACGACGGAGTCCAAGGCTTGGCCCGCCAATCCGCCGAGTCGTGCCGGAGGATTATCCACCACGCCAAACAGACCGGCGTCACCGCCTCCGTCCTCTGGCACTCGCTCCGGTCCGTGTTGTCCTCCGCCAACCACGAGGTCCGTTCCGGCTTCCAGCTTAGGGTTGCGGCGCTTCTCGCCGATATTTCCGCGGCCAATGCCAGCCGCAGGGCCGCCATTGTGGGCGCCGGAGGCGGCGCCGTCGTCGATTGGCTGCTCGAGTCGGTGGCGGTCCCCAGGGATGGGTCTCGCACTCAGGCGGAGTCGGCCAGAGCGCTTGCTTTCTTGATCGCCGACCCTAATGTCTCCGCAGCCGTGCTCGGCAGGCCTAACGCTGTTCCTAATCTCTTGAGGTTTATCTATTCGTGCCAGCCTAAGCAATCAAACAAGCACTCGAGACGTAGTTTGCTCGATGTTTCTGATTCTTTGAGAGGCAGGAGCATGCTTGTAGCTGCCATAATGGATATTGTCACGTCCAACTGTGATAGTTCAGAAAAGATGTCTTTTAAGCCTTCTTTGCCAGGTGATGCTGAAACGCGGGATATAGCAGCTGCCCTTCAAGTTATTGAAGAAGGTGGCATGCGTTTGGATGATTCAAATGAACATGAAGGTGACGAAGATGGTGATAGTGGAATCAAGGGTATTGGTATAAAAGTTCTTGGGGGTACATCAGTTTTAGGACTATCAAGAACGAGTGGACTTATGGAGTTGCGGAATTCTGATAGTAGTGGTGTAGAATCAGTGAGGGTTACTAACCAAAATCTTCTCCTGCAAAGTAAGCATGACAGTTCTCTAGCACAAACCAACTTGTCTTCAGCTGTTGTTCCTGGGCTCTGGGATGATTTGACTTGTCAACATGTTGCTGTTCCATTTGCTGCATGGGCATTGGCAAACTGGGCAATGGCATCAGATGAGAATCGATCACGCATACAGGAATTGGATGCTGATGGAAATGCTGTCATGACTGCTTTAATGGCACCTGAGAGATCAGTAAAATGGCACGGTAGTTTGGTGGCTCGCTTGCTTTTAGAGGATGATAAGTTACCCCTCAATGGTTCTGTTTCTGATTGGAGTTCCAGTCTTCTTTCTACTGCTTCACAAGCAACTAAAAATAAAGACATTCCTTTGGCTAAGGTGGCTTTGTCAGCATTCTTGGTTTCTGTTGAGAAATGCCCTGAAGCACGGAAGAGAGTGATGGAAAAGGGTCTTCATTTGATAAGAGACACTGCTAAGCGGACAACGAAACATAAGCATGTGCAGGAAGCATTGGCAAAGGCATTAGAATTGCTATGCACTGGAGACTTGCATTTATCTCTTCAAGAGGGTCAAAAGTGGTCTGGTGTATTACTTCCATGGGTTTTTGGGCAATCTTCCTCTGATACCATGCGTGTTTCAGCGATAAAAATCCTTTCTCGCATTCTTGATGACTATGGACCCTATTCTGTACCAATTTCTCAGGGATGGTTAGCTATTCTACTAACTGAAATTCTGGGTTCCAGCAAGGCATCATCAGTTAAAGGAAATACTCAGCCTAAATCTGATAAAGTTAAGACTCAAATTGATCAGTCAAACATTCTTTCTGCTGCACAAACTGCTAATCAGTTGGTGGCAGCTGTTGTTAATCTAGCAGTGAAACAGCTAGGAACAACCCCTGATTCTGTTGATACATCTCCACTGGCAGATCTTCTTTCCATGGAGCCTTTTTCCGCCCCATTAAAAACTCTAAAGAAAGATAGTGTGCCTAAGGTTGATGTGGCTGATTCTGCAATGGCAACCTTGAAGGGAATCAAAGCACTGACTGAAGTTTGTTCTGCGGATTCTTTATGTCAGGAAAAAATAGTTGATTTTGGGGTCTTATGTTTGCTGAGACGGTTTTTGTTGCGTGATGATTATGAGAAACTTTCTGCAATAGAAGCCTATGATGCTTCTAAAACGCTTGAGGCACAGGATCGAACCTCAAATATTCCTAAAGAATCATCTACTTCAGATAGTAATGATCCATCTAGTGTTAGAGTTCCGCCTACAGCACACATGCGCCGGCATGCAGCTAGGCTGTTAACTATCCTCTCGCTACTTCCAAAAGTCCAGAAAGTCATTATAAAAGATGAAGCTTGGTGTAAATGGCTTGAGGATTGTGCTAATGGTAAGATCTCAGGTTGCAGTGATCTTAAGATACAAAGTTATGCTCGAGCAACACTATTAAATATATTTTGTAATCGCCCAATTGATAGAGATTCTGCAAACGGTGACACTCCTGATGCTGGTACTGCAAACATTAACAAAAGTTCTCCACGATATGGTGACAATATATTTTTAATCAATCCTGAATTATCCCATTGGAAATGTCCTGAAAAAGTTGATCAAGACGCAGCTCACCAGGATTCATCTTCTTTAGATGGGGCCAATCCTATTGACAGTGAGGATAAATCTGTGACCAGACTTTCAGATGATGTTAACTCTTCTAGTTCTGGGGATGCATCTCACAGTGGTACAGGCAAAAGGGAGCCTCCTCATCTGGATATAATTTTCGTGCATGGCCTCCGTGGGGGGCCTTATAAGACTTGGCGTATAGCCGAGGACAAGTCATCCACTAAGTCTGGCTTAGTAGAGAAGATTGATCAGGAAGCTGGGAAGCTGGGAACCTTTTGGCCAGGTGAATGGCTTTCAGCTGATTTCCCCCAAGCTCGTATGTTTACCCTTAGATACAAGTCAAGTTTAACACAATGGTCTGGCGCTAGCCTGCCCCTTCAGGAAGTTAGCTCAATGCTGTTAGAGAAGATTGTTGCTGCAGGTATTGGGGATCGACCTGTTGTTTTTGTGACTCATAGCATGGGGGGTCTGGTTGTCAAGCAGATACTATCTAAAGCAAAATCAGAGAATATCAATAATCTTGTGAACAACACCGTTGGAATTGTTTTCTATAGCTGCCCACATTTCGGAAGCAAACTTGCAGACATGCCTTGGAAGATGGGATTTGTGTTGCGCCCAGCGCCAACTATAGGGGAGCTAACAAGTGGGTCTCCAAGATTAGTACAGCTTAATGACTATATTCGTCACCTTCACAAAAAGGGGTTGCTTCAAGTCCTCAGTTTTTGTGAGACAAAGGTGACTCCAATTGTTGAAGGTTATGGAGGATGGGCCTTCCGAATGGAGATTGTACCAATTGAATCAGCATATCCTGGATTTGGTGAACTCGTTGTATTAGAGTCAACAGATCATATAAATTCGTGCAAACCACTCAGCCGCAGCGATCCCTCATACACAGAGATATTAGAGTTCTTACGGAAGCTGAAAACCAGCTCCGAGAAACAGACAGCAGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1226

Amino Acids

132.99

Weight (kDa)

8.23

Isoelectric Point (pI)

48.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2456, 2913
AasI GACNNNNNNGTC 1 cut(s) 659
Acc36I ACCTGC 1 cut(s) 3137
AccB1I GGYRCC 3 cut(s) 542, 554, 1333
AccB7I CCANNNNNTGG 2 cut(s) 337, 2654
AccBSI CCGCTC 1 cut(s) 174
AccII CGCG 3 cut(s) 242, 509, 895
AclWI GGATC 4 cut(s) 2313, 2348, 3165, 3602
AcoI YGGCCR 3 cut(s) 510, 624, 3005
AcsI RAATTY 3 cut(s) 1072, 1842, 3580
AcuI CTGAAG 5 cut(s) 1155, 1554, 2178, 2325, 3089
AcyI GRCGYC 3 cut(s) 396, 543, 555
AfaI GTAC 6 cut(s) 1024, 1803, 2623, 2848, 3390, 3516
AfeI AGCGCT 1 cut(s) 633
AflII CTTAAG 1 cut(s) 2525
AflIII ACRYGT 1 cut(s) 1213
AgsI TTSAA 9 cut(s) 310, 917, 926, 954, 1676, 2137, 3437, 3479, 3524
AhdI GACNNNNNGTC 1 cut(s) 301
AjiI CACGTC 1 cut(s) 831
AjnI CCWGG 6 cut(s) 593, 877, 1183, 2733, 3007, 3535
Alw21I GWGCWC 1 cut(s) 678
Alw26I GTCTC 9 cut(s) 17, 609, 667, 748, 1572, 1650, 2218, 3381, 3449
AlwI GGATC 4 cut(s) 2313, 2348, 3165, 3602
Ama87I CYCGRG 3 cut(s) 575, 751, 2544
Aor51HI AGCGCT 1 cut(s) 633
ApoI RAATTY 3 cut(s) 1072, 1842, 3580
AsiSI GCGATCGC 1 cut(s) 246
AspLEI GCGC 8 cut(s) 490, 545, 557, 634, 2394, 3092, 3342, 3349
AspS9I GGNCC 9 cut(s) 340, 429, 457, 528, 589, 1790, 2757, 2906, 3495
AsuNHI GCTAGC 1 cut(s) 3092
AvaI CYCGRG 3 cut(s) 575, 751, 2544
AvaII GGWCC 4 cut(s) 429, 457, 589, 1790
AxyI CCTNAGG 1 cut(s) 2100
BaeI ACNNNNGTAYC 2 cut(s) 1014, 1047
BalI TGGCCA 1 cut(s) 3007
BanI GGYRCC 3 cut(s) 542, 554, 1333
BanII GRGCYC 1 cut(s) 1191
BauI CACGAG 1 cut(s) 452
BbsI GAAGAC 3 cut(s) 1161, 1430, 1556
Bbv12I GWGCWC 1 cut(s) 678
BceAI ACGGC 4 cut(s) 257, 266, 542, 656
BciT130I CCWGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
BclI TGATCA 3 cut(s) 1918, 2716, 2974
BcoDI GTCTC 9 cut(s) 17, 609, 667, 748, 1572, 1650, 2218, 3381, 3449
BfaI CTAG 7 cut(s) 1151, 1982, 1997, 2361, 2406, 2820, 3093
BfmI CTRYAG 4 cut(s) 2379, 3144, 3277, 3354
BfoI RGCGCY 6 cut(s) 491, 546, 558, 635, 3093, 3350
BfrI CTTAAG 1 cut(s) 2525
BfuAI ACCTGC 1 cut(s) 3137
BglII AGATCT 2 cut(s) 2038, 2505
BlpI GCTNAGC 1 cut(s) 1587
Bme1390I CCNGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
Bme18I GGWCC 4 cut(s) 429, 457, 589, 1790
BmeRI GACNNNNNGTC 1 cut(s) 301
BmeT110I CYCGRG 3 cut(s) 575, 751, 2544
BmgBI CACGTC 1 cut(s) 831
BmgT120I GGNCC 9 cut(s) 340, 429, 457, 528, 589, 1790, 2757, 2906, 3495
BmrFI CCNGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
BmrI ACTGGG 1 cut(s) 1261
BmsI GCATC 8 cut(s) 874, 1271, 1288, 1871, 2269, 2605, 2821, 2843
BmtI GCTAGC 1 cut(s) 3096
BmuI ACTGGG 1 cut(s) 1261
BoxI GACNNNNGTC 1 cut(s) 395
BpiI GAAGAC 3 cut(s) 1161, 1430, 1556
BpmI CTGGAG 3 cut(s) 79, 160, 1674
Bpu10I CCTNAGC 3 cut(s) 476, 732, 1488
Bpu1102I GCTNAGC 1 cut(s) 1587
BpuEI CTTGAG 3 cut(s) 727, 2315, 2504
Bsa29I ATCGAT 1 cut(s) 1276
BsaBI GATNNNNATC 2 cut(s) 1272, 1760
BsaHI GRCGYC 3 cut(s) 396, 543, 555
BsaI GGTCTC 2 cut(s) 609, 3381
BsaWI WCCGGW 1 cut(s) 426
BsaXI ACNNNNNCTCC 4 cut(s) 158, 188, 1420, 1450
Bse118I RCCGGY 2 cut(s) 392, 2394
Bse1I ACTGG 4 cut(s) 1256, 1434, 1657, 2037
Bse21I CCTNAGG 1 cut(s) 2100
Bse3DI GCAATG 2 cut(s) 1263, 2130
Bse8I GATNNNNATC 2 cut(s) 1272, 1760
BseBI CCWGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
BseCI ATCGAT 1 cut(s) 1276
BseGI GGATG 9 cut(s) 604, 952, 1201, 1303, 1396, 1823, 2836, 2942, 3497
BseJI GATNNNNATC 2 cut(s) 1272, 1760
BseMI GCAATG 2 cut(s) 1263, 2130
BseMII CTCAG 9 cut(s) 264, 626, 1329, 1826, 1898, 2213, 2523, 3457, 3610
BseNI ACTGG 4 cut(s) 1256, 1434, 1657, 2037
BseRI GAGGAG 2 cut(s) 76, 2856
BseYI CCCAGC 3 cut(s) 2984, 2992, 3343
BsgI GTGCAG 2 cut(s) 1634, 1926
Bsh1236I CGCG 3 cut(s) 242, 509, 895
Bsh1285I CGRYCG 1 cut(s) 246
BshNI GGYRCC 3 cut(s) 542, 554, 1333
BshVI ATCGAT 1 cut(s) 1276
BsiEI CGRYCG 1 cut(s) 246
BsiHKAI GWGCWC 1 cut(s) 678
BsiHKCI CYCGRG 3 cut(s) 575, 751, 2544
BsiSI CCGG 6 cut(s) 364, 393, 427, 465, 546, 2395
BslFI GGGAC 3 cut(s) 128, 179, 575
BsmAI GTCTC 9 cut(s) 17, 609, 667, 748, 1572, 1650, 2218, 3381, 3449
BsmBI CGTCTC 3 cut(s) 17, 748, 2218
BsmFI GGGAC 3 cut(s) 128, 179, 575
BsmI GAATGC 2 cut(s) 1505, 1773
Bso31I GGTCTC 2 cut(s) 609, 3381
BsoBI CYCGRG 3 cut(s) 575, 751, 2544
Bsp1286I GDGCHC 2 cut(s) 678, 1191
Bsp1720I GCTNAGC 1 cut(s) 1587
Bsp19I CCATGG 2 cut(s) 1709, 2049
BspCNI CTCAG 9 cut(s) 263, 625, 1330, 1825, 1897, 2214, 2522, 3456, 3609
BspDI ATCGAT 1 cut(s) 1276
BspFNI CGCG 3 cut(s) 242, 509, 895
BspHI TCATGA 1 cut(s) 1317
BspMAI CTGCAG 1 cut(s) 3148
BspMI ACCTGC 1 cut(s) 3137
BspOI GCTAGC 1 cut(s) 3096
BspPI GGATC 4 cut(s) 2313, 2348, 3165, 3602
BspT107I GGYRCC 3 cut(s) 542, 554, 1333
BspTI CTTAAG 1 cut(s) 2525
BspTNI GGTCTC 2 cut(s) 609, 3381
BsrBI CCGCTC 1 cut(s) 174
BsrDI GCAATG 2 cut(s) 1263, 2130
BsrFI RCCGGY 2 cut(s) 392, 2394
BsrI ACTGG 4 cut(s) 1256, 1434, 1657, 2037
BssAI RCCGGY 2 cut(s) 392, 2394
BssNI GRCGYC 3 cut(s) 396, 543, 555
BssSI CACGAG 1 cut(s) 452
BssT1I CCWWGG 4 cut(s) 331, 1709, 2049, 3317
Bst2BI CACGAG 1 cut(s) 452
Bst2UI CCWGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
Bst6I CTCTTC 4 cut(s) 53, 1538, 1677, 2821
BstACI GRCGYC 3 cut(s) 396, 543, 555
BstAFI CTTAAG 1 cut(s) 2525
BstAPI GCANNNNNTGC 1 cut(s) 1949
BstDSI CCRYGG 4 cut(s) 507, 1709, 2049, 2899
BstF5I GGATG 9 cut(s) 604, 952, 1201, 1303, 1396, 1823, 2836, 2942, 3497
BstFNI CGCG 3 cut(s) 242, 509, 895
BstH2I RGCGCY 6 cut(s) 491, 546, 558, 635, 3093, 3350
BstHHI GCGC 8 cut(s) 490, 545, 557, 634, 2394, 3092, 3342, 3349
BstMAI GTCTC 9 cut(s) 17, 609, 667, 748, 1572, 1650, 2218, 3381, 3449
BstMCI CGRYCG 1 cut(s) 246
BstNI CCWGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
BstNSI RCATGY 7 cut(s) 802, 940, 1217, 1613, 2392, 2402, 3316
BstPAI GACNNNNGTC 1 cut(s) 395
BstSCI CCNGG 6 cut(s) 593, 877, 1183, 2733, 3007, 3535
BstSFI CTRYAG 4 cut(s) 2379, 3144, 3277, 3354
BstUI CGCG 3 cut(s) 242, 509, 895
BstV2I GAAGAC 3 cut(s) 1161, 1430, 1556
BstX2I RGATCY 2 cut(s) 2038, 2505
BstXI CCANNNNNNTGG 1 cut(s) 3015
BstYI RGATCY 2 cut(s) 2038, 2505
Bsu15I ATCGAT 1 cut(s) 1276
Bsu36I CCTNAGG 1 cut(s) 2100
BsuTUI ATCGAT 1 cut(s) 1276
BtgI CCRYGG 4 cut(s) 507, 1709, 2049, 2899
BtrI CACGTC 1 cut(s) 831
BtsCI GGATG 9 cut(s) 604, 952, 1201, 1303, 1396, 1823, 2836, 2942, 3497
BtsI GCAGTG 3 cut(s) 1581, 1992, 2524
BtsIMutI CAGTG 9 cut(s) 1104, 1581, 1650, 1992, 2030, 2150, 2524, 2779, 2848
BveI ACCTGC 1 cut(s) 3137
CciI TCATGA 1 cut(s) 1317
CfoI GCGC 8 cut(s) 490, 545, 557, 634, 2394, 3092, 3342, 3349
Cfr10I RCCGGY 2 cut(s) 392, 2394
Cfr13I GGNCC 9 cut(s) 340, 429, 457, 528, 589, 1790, 2757, 2906, 3495
Cfr42I CCGCGG 1 cut(s) 510
ClaI ATCGAT 1 cut(s) 1276
CpoI CGGWCCG 1 cut(s) 429
CseI GACGC 2 cut(s) 385, 2732
Csp6I GTAC 6 cut(s) 1023, 1802, 2622, 2847, 3389, 3515
CspI CGGWCCG 1 cut(s) 429
CviQI GTAC 6 cut(s) 1023, 1802, 2622, 2847, 3389, 3515
DinI GGCGCC 2 cut(s) 544, 556
DrdI GACNNNNNNGTC 1 cut(s) 659
DriI GACNNNNNGTC 1 cut(s) 301
DseDI GACNNNNNNGTC 1 cut(s) 659
EaeI YGGCCR 3 cut(s) 510, 624, 3005
Eam1104I CTCTTC 4 cut(s) 53, 1538, 1677, 2821
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 4 cut(s) 53, 1538, 1677, 2821
EciI GGCGGA 7 cut(s) 79, 138, 340, 433, 632, 2053, 2364
Eco130I CCWWGG 4 cut(s) 331, 1709, 2049, 3317
Eco147I AGGCCT 1 cut(s) 685
Eco24I GRGCYC 1 cut(s) 1191
Eco31I GGTCTC 2 cut(s) 609, 3381
Eco47I GGWCC 4 cut(s) 429, 457, 589, 1790
Eco47III AGCGCT 1 cut(s) 633
Eco57I CTGAAG 5 cut(s) 1155, 1554, 2178, 2325, 3089
Eco81I CCTNAGG 1 cut(s) 2100
Eco88I CYCGRG 3 cut(s) 575, 751, 2544
EcoO109I RGGNCCY 1 cut(s) 2906
EcoRI GAATTC 1 cut(s) 1072
EcoRII CCWGG 6 cut(s) 593, 877, 1183, 2733, 3007, 3535
EcoT14I CCWWGG 4 cut(s) 331, 1709, 2049, 3317
EcoT22I ATGCAT 1 cut(s) 2836
EcoT38I GRGCYC 1 cut(s) 1191
EgeI GGCGCC 2 cut(s) 544, 556
EheI GGCGCC 2 cut(s) 544, 556
ErhI CCWWGG 4 cut(s) 331, 1709, 2049, 3317
Esp3I CGTCTC 3 cut(s) 17, 748, 2218
FalI AAGNNNNNCTT 2 cut(s) 2942, 2974
FaqI GGGAC 3 cut(s) 128, 179, 575
FauI CCCGC 4 cut(s) 80, 221, 350, 888
FbaI TGATCA 3 cut(s) 1918, 2716, 2974
FokI GGATG 9 cut(s) 611, 959, 1208, 1310, 1403, 1830, 2843, 2929, 3504
FriOI GRGCYC 1 cut(s) 1191
FspBI CTAG 7 cut(s) 1151, 1982, 1997, 2361, 2406, 2820, 3093
GlaI GCGC 8 cut(s) 489, 544, 556, 633, 2393, 3091, 3341, 3348
GsaI CCCAGC 3 cut(s) 2988, 2996, 3347
GsuI CTGGAG 3 cut(s) 79, 160, 1674
HaeII RGCGCY 6 cut(s) 491, 546, 558, 635, 3093, 3350
HapII CCGG 6 cut(s) 364, 393, 427, 465, 546, 2395
HgaI GACGC 2 cut(s) 385, 2732
HhaI GCGC 8 cut(s) 490, 545, 557, 634, 2394, 3092, 3342, 3349
Hin1I GRCGYC 3 cut(s) 396, 543, 555
Hin6I GCGC 8 cut(s) 488, 543, 555, 632, 2392, 3090, 3340, 3347
HinP1I GCGC 8 cut(s) 488, 543, 555, 632, 2392, 3090, 3340, 3347
HincII GTYRAC 4 cut(s) 1211, 2415, 2812, 3567
HindII GTYRAC 4 cut(s) 1211, 2415, 2812, 3567
HindIII AAGCTT 1 cut(s) 2466
HpaI GTTAAC 2 cut(s) 2415, 2812
HpaII CCGG 6 cut(s) 364, 393, 427, 465, 546, 2395
Hpy166II GTNNAC 8 cut(s) 1055, 1211, 2415, 2812, 3051, 3253, 3548, 3567
Hpy8I GTNNAC 8 cut(s) 1055, 1211, 2415, 2812, 3051, 3253, 3548, 3567
Hpy99I CGWCG 7 cut(s) 33, 278, 281, 299, 326, 563, 566
HpyAV CCTTC 9 cut(s) 879, 923, 923, 959, 2131, 3113, 3425, 3473, 3508
HpyCH4IV ACGT 2 cut(s) 757, 830
HpySE526I ACGT 2 cut(s) 757, 830
Hsp92I GRCGYC 3 cut(s) 396, 543, 555
HspAI GCGC 8 cut(s) 488, 543, 555, 632, 2392, 3090, 3340, 3347
KasI GGCGCC 2 cut(s) 542, 554
KroI GCCGGC 1 cut(s) 2394
KroNI GCCGGC 1 cut(s) 2396
Ksp22I TGATCA 3 cut(s) 1918, 2716, 2974
KspAI GTTAAC 2 cut(s) 2415, 2812
KspI CCGCGG 1 cut(s) 510
LmnI GCTCC 8 cut(s) 12, 179, 429, 795, 2053, 2860, 3361, 3662
LweI GCATC 8 cut(s) 874, 1271, 1288, 1871, 2269, 2605, 2821, 2843
MaeI CTAG 7 cut(s) 1151, 1982, 1997, 2361, 2406, 2820, 3093
MaeII ACGT 2 cut(s) 757, 830
MbiI CCGCTC 1 cut(s) 174
MfeI CAATTG 3 cut(s) 2580, 3471, 3519
MflI RGATCY 2 cut(s) 2038, 2505
MhlI GDGCHC 2 cut(s) 678, 1191
MlsI TGGCCA 1 cut(s) 3007
MluNI TGGCCA 1 cut(s) 3007
Mly113I GGCGCC 2 cut(s) 543, 555
MlyI GAGTC 8 cut(s) 336, 365, 587, 629, 1903, 3172, 3460, 3572
MmeI TCCRAC 3 cut(s) 318, 858, 3244
Mox20I TGGCCA 1 cut(s) 3007
Mph1103I ATGCAT 1 cut(s) 2836
MroNI GCCGGC 1 cut(s) 2394
MscI TGGCCA 1 cut(s) 3007
MslI CAYNNNNRTG 2 cut(s) 966, 1608
Msp20I TGGCCA 1 cut(s) 3007
MspA1I CMGCKG 5 cut(s) 509, 908, 1175, 1970, 3026
MspCI CTTAAG 1 cut(s) 2525
MspI CCGG 6 cut(s) 364, 393, 427, 465, 546, 2395
MspR9I CCNGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
MunI CAATTG 3 cut(s) 2580, 3471, 3519
Mva1269I GAATGC 2 cut(s) 1505, 1773
MvaI CCWGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
MvnI CGCG 3 cut(s) 242, 509, 895
NaeI GCCGGC 1 cut(s) 2396
NarI GGCGCC 2 cut(s) 543, 555
NcoI CCATGG 2 cut(s) 1709, 2049
NgoMIV GCCGGC 1 cut(s) 2394
NheI GCTAGC 1 cut(s) 3092
NmeAIII GCCGAG 4 cut(s) 207, 379, 657, 2956
NsiI ATGCAT 1 cut(s) 2836
NspI RCATGY 7 cut(s) 802, 940, 1217, 1613, 2392, 2402, 3316
PaeI GCATGC 3 cut(s) 802, 940, 2402
PaeR7I CTCGAG 3 cut(s) 575, 751, 2544
PagI TCATGA 1 cut(s) 1317
PasI CCCWGGG 1 cut(s) 594
PceI AGGCCT 1 cut(s) 685
PciI ACATGT 1 cut(s) 1213
PcsI WCGNNNNNNNCGW 1 cut(s) 285
PctI GAATGC 2 cut(s) 1505, 1773
PdiI GCCGGC 1 cut(s) 2396
PflFI GACNNNGTC 1 cut(s) 326
PflMI CCANNNNNTGG 2 cut(s) 337, 2654
PfoI TCCNGGA 1 cut(s) 3535
Ple19I CGATCG 1 cut(s) 246
PleI GAGTC 8 cut(s) 335, 364, 586, 628, 1903, 3172, 3460, 3571
PluTI GGCGCC 2 cut(s) 546, 558
PpsI GAGTC 8 cut(s) 335, 364, 586, 628, 1903, 3172, 3460, 3571
PscI ACATGT 1 cut(s) 1213
PshAI GACNNNNGTC 1 cut(s) 395
PsiI TTATAA 2 cut(s) 2456, 2913
Psp6I CCWGG 6 cut(s) 593, 877, 1183, 2733, 3007, 3535
PspFI CCCAGC 3 cut(s) 2984, 2992, 3343
PspGI CCWGG 6 cut(s) 593, 877, 1183, 2733, 3007, 3535
PspPI GGNCC 9 cut(s) 340, 429, 457, 528, 589, 1790, 2757, 2906, 3495
PspXI VCTCGAGB 2 cut(s) 575, 2544
PstI CTGCAG 1 cut(s) 3148
PsuI RGATCY 2 cut(s) 2038, 2505
PsyI GACNNNGTC 1 cut(s) 326
PvuI CGATCG 1 cut(s) 246
PvuII CAGCTG 4 cut(s) 908, 1175, 1970, 3026
RgaI GCGATCGC 1 cut(s) 246
RsaI GTAC 6 cut(s) 1024, 1803, 2623, 2848, 3390, 3516
RsaNI GTAC 6 cut(s) 1023, 1802, 2622, 2847, 3389, 3515
RseI CAYNNNNRTG 2 cut(s) 966, 1608
Rsr2I CGGWCCG 1 cut(s) 429
RsrII CGGWCCG 1 cut(s) 429
SacII CCGCGG 1 cut(s) 510
Sau96I GGNCC 9 cut(s) 340, 429, 457, 528, 589, 1790, 2757, 2906, 3495
SchI GAGTC 8 cut(s) 336, 365, 587, 629, 1903, 3172, 3460, 3572
ScrFI CCNGG 6 cut(s) 595, 879, 1185, 2735, 3009, 3537
SduI GDGCHC 2 cut(s) 678, 1191
SfaAI GCGATCGC 1 cut(s) 246
SfaNI GCATC 8 cut(s) 874, 1271, 1288, 1871, 2269, 2605, 2821, 2843
SfcI CTRYAG 4 cut(s) 2379, 3144, 3277, 3354
SfoI GGCGCC 2 cut(s) 544, 556
Sfr274I CTCGAG 3 cut(s) 575, 751, 2544
Sfr303I CCGCGG 1 cut(s) 510
SgfI GCGATCGC 1 cut(s) 246
SgrBI CCGCGG 1 cut(s) 510
SinI GGWCC 4 cut(s) 429, 457, 589, 1790
SlaI CTCGAG 3 cut(s) 575, 751, 2544
SmiMI CAYNNNNRTG 2 cut(s) 966, 1608
SmlI CTYRAG 7 cut(s) 575, 706, 751, 2294, 2483, 2525, 2544
SmoI CTYRAG 7 cut(s) 575, 706, 751, 2294, 2483, 2525, 2544
SphI GCATGC 3 cut(s) 802, 940, 2402
SseBI AGGCCT 1 cut(s) 685
SspDI GGCGCC 2 cut(s) 542, 554
SspI AATATT 1 cut(s) 2320
SspMI CTAG 7 cut(s) 1151, 1982, 1997, 2361, 2406, 2820, 3093
StuI AGGCCT 1 cut(s) 685
StyD4I CCNGG 6 cut(s) 593, 877, 1183, 2733, 3007, 3535
StyI CCWWGG 4 cut(s) 331, 1709, 2049, 3317
TaiI ACGT 2 cut(s) 760, 833
TaqI TCGA 9 cut(s) 108, 564, 576, 752, 768, 1276, 2308, 2545, 3160
TatI WGTACW 1 cut(s) 3388
TauI GCSGC 8 cut(s) 174, 242, 488, 512, 525, 533, 555, 3603
TscAI CASTG 9 cut(s) 1104, 1588, 1657, 1992, 2037, 2157, 2524, 2779, 2848
TspDTI ATGAA 5 cut(s) 972, 978, 1556, 2478, 2730
TspGWI ACGGA 7 cut(s) 339, 397, 421, 449, 1555, 2888, 3655
TspRI CASTG 9 cut(s) 1104, 1588, 1657, 1992, 2037, 2157, 2524, 2779, 2848
Tth111I GACNNNGTC 1 cut(s) 326
Van91I CCANNNNNTGG 2 cut(s) 337, 2654
Vha464I CTTAAG 1 cut(s) 2525
VpaK11BI GGWCC 4 cut(s) 429, 457, 589, 1790
XapI RAATTY 3 cut(s) 1072, 1842, 3580
XceI RCATGY 7 cut(s) 802, 940, 1217, 1613, 2392, 2402, 3316
XcmI CCANNNNNNNNNTGG 1 cut(s) 1233
XhoI CTCGAG 3 cut(s) 575, 751, 2544
XspI CTAG 7 cut(s) 1151, 1982, 1997, 2361, 2406, 2820, 3093
Zsp2I ATGCAT 1 cut(s) 2836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.