Rroxscaffold_7G00161070

phosphatidylglycerol acyl-chain remodeling

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
3910639 .. 3917239
6601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00161070.1

Sequence Viewer

Length: 3738 bp
ATGATGCTCCGTCTCTGCCACAGAACCCGTCGCTACTGCTATCACCTCTTCCCTCACCACCACCGTCACCCCCGTCCCCTTTCCTCCTCCGCCTCCAGAAACCCCATCGAACCCCCCAACAATCTCAAAAATGCCAACCAAGTCCCTCCGCCACCGCCAATTCTCCACCGCCGCTCCAGCCCTATCTTCCCTATCCCCACCGCCTCCCTCTCCCGCAACACCGTCCTCGGCCTCACTGCCGCGATCGCCTCAGTCGCAATCGCCTCCTACGCCGTCGTCGCCGTTACCGATTCCGACGACAAGTCGTTCAATCCTCTCTACGACGGAGTCCAAGGCTTGGCGCGCCATTCCGCCGAGTCGTTCCGGAGGATTATCCACCACGCCAAACAGACCGGCGTCACCGCCTCCGTCCTCTGGCACTCGCTCCGGTCCGTGTTGTCCTCCGCCAACCACGAGGTCCGTTCCGGCTTCCAGCTTAGGGTTGCGGCGCTCCTCGCCGATATTTCCGCGGCCAATGCCAGCCGCAGGGCCGCCATTGTGGGCGCTGGAGGCGGCGCCGTCGTTGATTGGCTGCTCGAGTCGGTGGCGGTCCCCAGGGATGGGTCCCGCACTCAGGCGGAGTCGGCCAGAGCGCTTGCGTTCTTGCTCGCCGACCCTAATGTCTCCGCAGCCGTGCTCGGCAGGCCTAACGCTGTTCCTAATCTCTTGAGGTTTATCTATTCGTGCCAGCCTAAGCAATCCAACAAGCACTCGAGACGTAGTTTGCTCGATGTTTCTGATTCTTTGAGAGGCAGGAGCATGCTTGTAGCTGCCATAATGGATATTGTCACGTCCAACTGTGATAGTTCAGAAAAGATGTCTTTTAAGCCTTCTTTGCCAGGTGATGCTGAAACGCGGGATATAGCAGCTGCCCTTCAAGTTATTGAAGAAGGTGGCATGCGTTTGGATGATTCAAATGAGCATAAAAGTGACGAAGATGGTGATAGTGGAATCAAGGGTATTGGTATAAAAGTTCTTGGGGGTACATCAGTTTTAGGACTATCAAGAACGAGTGGACTTATGGAGTTGCGGAATTCTGATAGTAGTGGTGTAGAATCAGTGAGGGTTACTAACCAAAATCTTCTCCTGCAAAGTAAGCATGACAGTTCTTTAGCACAAACCAACTTGTCTTCAGCTGTCGTTCCTGGGCTCTGGGATGATTTGACTTGTCAACATGTTGCTGTTCCATTTGCTGCATGGGCATTGGCAAACTGGGCAATGGCATCAGATGAGAATCGATCACGCATACAGGAATTGGATGCTGATGGAAATGCTGTCATGACTGCTTTAATGGCACCTGAGAGATCAGTAAAATGGCACGGTAGTTTGGTGGCTCGCTTGCTTTTAGAGGATGATAAGTTACCCCTGAATGGTTCTGTTTCTGATTGGAGTTCCTGTCTTCTTTCTACTGCTTCACAAGCAACTAAAAATAAAGACATTCCTTTGGCTAAGGTGGCTTTGTCAGCATTCTTGGTTTCTGTTGAGAAATGCCCTGAAGCACGGAAGAGAGTGATGGAAAAGGGTCTTCATTTGATAAGAGACACTGCTAAGCGGACAACGAAACATAAGCATGTGCAGGAAGCATTGGCAAAGGCATTAGAATTGTTATGCACTGGAGACTTGCATTTATCTCTTCAAGATGGTCAAAAGTGGTCTGGTGTATTACTTCCATGGGTTTTTGGGCAATCTTCCTCTGATACCATGCGTGTTTCAGCGATAAAAATCCTTTCTCGCATTCTTGATGACTATGGACCCTATTCTGTACCAATTTCTCAGGGATGGTTAGCTATTCTGCTAACTGAAATTCTGGGTTCCAGCAAGGCATCATCAGTTAAAGGAAATACTCAGCCTAAATCTGATAAAGTTAAGGCTCCACCTCTCAGATACTGCTTATCTGTGTTTAAAATTATAATTGTTGACCTTAATTTCTTTACCAGTATTCATAAAGCCAAATACTTTTTGCAGACTCAAATTGATCAGTCAAACATTTTTTCTGCTGCGCAAACTGCTAATCAGTTGGCGGCAGCTGTTGTTAATCTAGCAGTGAAGCAGCTAGGAACAACCCCTGATTCTGTTGATACATCTCCACTGGCAGATCTTCTTTCCATGGAACCTTTTTCCGCCCCATTAAGAACTCTAAAGAAAGATAGTGTGCCTAAGGTTGATGTGGCTGATTCTGCAATGGCAACCTTGAAGGGAATCAAAGCACTGACTGAAGTTTGTTCTGCGGATTCTTTATGTCAGGAAAAAATAGTTGATTTTGGGGTCTTATGTTTGCTGAGACGGTTTTTGTTGCGTGATGATTATGAGAAACTTTCTGCAATAGAAGCCTATGATGCTTCTAAAACGCTTGAGGCACAGGATCGAACCTCAAATATTCCTAAAGAATCATCTACTTCAGATAGTAATGATCCATCTAGTGTTAGAGTTCCGCCTACAGCACACATGCGCCGGCATGCAGCTAGGCTGTTAACTATCCTCTCGCTACTTCCAAAAGTCCAGAAAGTCATTATAAAAGATGAAGCTTGGTGTAAGTGGCTTGAGGATTGTGCTAATGGTAAGATCTCAGGTTGCAGTGATCTTAAGATACAAAGTTATGCTCGAGCAACACTATTAAATATATTTTGTAATCGCCCAATTGATAGAGATTCTGCAAACGGTGACACTCCTGATGTTGGTACTGCAAACATTAACAAAAGTTCTCCACGATATGGTGACAATATATTTTTAATCAATCCTGAATTATCCCATTGGAAATGTCCTGAAAAAGTTTATCAAGACGCAGCTCACCAGGATTCATCTTCTTTAGATGGGGCCAATCCTATTGACAGTGAGGATAAATCTGTGACCAGACTTTCAGATGATGTTAACTCTTCTAGTTCTGGGGATGCATCTCACAGTGGTAGAGGCAAAAGGGAGCCTCCTCATCTGGATATAATTTTCGTGCATGGCCTCCGTGGAGGGCCTTATAAGACTTGGCGTATAGCCGAGGACAAGTCATCCACTAAGTCTGGCTTAGTAGAGAAGATTGATCAGGAAGCTGGGAAGCTGGGAACCTTTTGGCCAGGTGAATGGCTTTCAGCTGATTTCCCCAAGCTCTCAAGTTTAACACAATGGTCTGGCGCTAGCCTGCCCCTTCAGGAAGTTAGCTCAATGCTGTTAGAGAAGATAGTTGCTGCAGGTATTGGGGATCGACCTGTTGTTTTTGTGACTCATAGCATGGGGGGTCTGGTCGTCAAGCAGATACTATCTAAAGCAAAATCAGAGAATATCAATAATCTTGTGAACAACACCGTTGGAATTGTTTTCTATAGCTGCCCACATTTTGGAAGCAAACTTGCAGACATGCCTTGGAAGATGGGATTTGTGTTGCGCCCAGCGCCAACTATAGGGGAGCTAACAAGTGGGTCTCCAAGATTAGTACAGCTTAATGACTATATTCGTCACCTTCACAAGAAGGGGTTGCTTCAAGTCCTCAGTTTTTGTGAGACAAAGGTGACTCCAATTGTTGAAGGTTATGGAGGATGGGCCTTCCGAATGGAGATTGTACCAATTGAATCAGCATATCCTGGATTTGGTGAACTCGTTGGACCCGGATTGGCTGGTGGCGATTATGATCAAATTGAGATGAAAGTGCGCATTGGCACACGAGTGGATTCCATCTGCTGGTCCTGTATATCGGAAACTAAACCAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1245

Amino Acids

135.22

Weight (kDa)

8.52

Isoelectric Point (pI)

46.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1949, 2552, 3009
AasI GACNNNNNNGTC 1 cut(s) 659
Acc16I TGCGCA 2 cut(s) 2040, 3677
Acc36I ACCTGC 1 cut(s) 3209
AccB1I GGYRCC 2 cut(s) 554, 1333
AccB7I CCANNNNNTGG 4 cut(s) 337, 2750, 3365, 3705
AccBSI CCGCTC 1 cut(s) 174
AccII CGCG 4 cut(s) 242, 343, 509, 895
AccIII TCCGGA 1 cut(s) 363
AclWI GGATC 3 cut(s) 2409, 2444, 3237
AcoI YGGCCR 3 cut(s) 510, 624, 3101
AcsI RAATTY 2 cut(s) 1072, 1842
AcuI CTGAAG 5 cut(s) 1155, 1554, 2274, 2421, 3161
AcyI GRCGYC 2 cut(s) 396, 555
AfaI GTAC 5 cut(s) 1024, 1803, 2719, 3462, 3588
AfeI AGCGCT 1 cut(s) 633
AflII CTTAAG 1 cut(s) 2621
AflIII ACRYGT 1 cut(s) 1213
AgsI TTSAA 9 cut(s) 310, 917, 926, 954, 1676, 2233, 3509, 3551, 3596
AhdI GACNNNNNGTC 1 cut(s) 301
AjiI CACGTC 1 cut(s) 831
AjnI CCWGG 6 cut(s) 593, 877, 1183, 2829, 3103, 3607
AleI CACNNNNGTG 1 cut(s) 3689
Alw21I GWGCWC 1 cut(s) 678
Alw26I GTCTC 8 cut(s) 17, 667, 748, 1572, 1650, 2314, 3453, 3521
AlwI GGATC 3 cut(s) 2409, 2444, 3237
AlwNI CAGNNNCTG 1 cut(s) 1926
Ama87I CYCGRG 3 cut(s) 575, 751, 2640
Aor13HI TCCGGA 1 cut(s) 363
Aor51HI AGCGCT 1 cut(s) 633
ApoI RAATTY 2 cut(s) 1072, 1842
AscI GGCGCGCC 1 cut(s) 341
AsiSI GCGATCGC 1 cut(s) 246
AsuC2I CCSGG 1 cut(s) 3633
AsuNHI GCTAGC 1 cut(s) 3164
AvaI CYCGRG 3 cut(s) 575, 751, 2640
AvaII GGWCC 7 cut(s) 429, 457, 589, 603, 1790, 3629, 3708
AxyI CCTNAGG 1 cut(s) 2196
BaeI ACNNNNGTAYC 2 cut(s) 1014, 1047
BalI TGGCCA 1 cut(s) 3103
BanI GGYRCC 2 cut(s) 554, 1333
BanII GRGCYC 1 cut(s) 1191
BauI CACGAG 2 cut(s) 452, 3687
BbsI GAAGAC 3 cut(s) 1161, 1430, 1556
Bbv12I GWGCWC 1 cut(s) 678
BceAI ACGGC 4 cut(s) 257, 266, 542, 656
BciT130I CCWGG 6 cut(s) 595, 879, 1185, 2831, 3105, 3609
BclI TGATCA 3 cut(s) 2014, 3070, 3655
BcnI CCSGG 1 cut(s) 3633
BcoDI GTCTC 8 cut(s) 17, 667, 748, 1572, 1650, 2314, 3453, 3521
BfaI CTAG 6 cut(s) 2078, 2093, 2457, 2502, 2916, 3165
BfmI CTRYAG 4 cut(s) 2475, 3216, 3349, 3426
BfoI RGCGCY 6 cut(s) 491, 546, 558, 635, 3165, 3422
BfrI CTTAAG 1 cut(s) 2621
BfuAI ACCTGC 1 cut(s) 3209
BglII AGATCT 2 cut(s) 2134, 2601
BlpI GCTNAGC 1 cut(s) 1587
Bme1390I CCNGG 7 cut(s) 595, 879, 1185, 2831, 3105, 3609, 3633
Bme18I GGWCC 7 cut(s) 429, 457, 589, 603, 1790, 3629, 3708
BmeRI GACNNNNNGTC 1 cut(s) 301
BmeT110I CYCGRG 3 cut(s) 575, 751, 2640
BmgBI CACGTC 1 cut(s) 831
BmrFI CCNGG 7 cut(s) 595, 879, 1185, 2831, 3105, 3609, 3633
BmrI ACTGGG 1 cut(s) 1261
BmsI GCATC 7 cut(s) 874, 1271, 1288, 1871, 2365, 2917, 2939
BmtI GCTAGC 1 cut(s) 3168
BmuI ACTGGG 1 cut(s) 1261
BoxI GACNNNNGTC 1 cut(s) 395
BpiI GAAGAC 3 cut(s) 1161, 1430, 1556
BpmI CTGGAG 4 cut(s) 79, 160, 567, 1674
Bpu10I CCTNAGC 3 cut(s) 476, 732, 1488
Bpu1102I GCTNAGC 1 cut(s) 1587
BpuEI CTTGAG 4 cut(s) 727, 2411, 2600, 3124
BpuMI CCSGG 1 cut(s) 3633
Bsa29I ATCGAT 1 cut(s) 1276
BsaBI GATNNNNATC 3 cut(s) 1272, 1760, 3654
BsaHI GRCGYC 2 cut(s) 396, 555
BsaI GGTCTC 1 cut(s) 3453
BsaWI WCCGGW 2 cut(s) 363, 426
BsaXI ACNNNNNCTCC 4 cut(s) 158, 188, 1420, 1450
Bse118I RCCGGY 2 cut(s) 392, 2490
Bse1I ACTGG 5 cut(s) 1256, 1657, 1974, 2133, 3731
Bse21I CCTNAGG 1 cut(s) 2196
Bse3DI GCAATG 2 cut(s) 1263, 2226
Bse8I GATNNNNATC 3 cut(s) 1272, 1760, 3654
BseAI TCCGGA 1 cut(s) 363
BseBI CCWGG 6 cut(s) 595, 879, 1185, 2831, 3105, 3609
BseCI ATCGAT 1 cut(s) 1276
BseGI GGATG 9 cut(s) 604, 952, 1201, 1303, 1396, 1823, 2932, 3038, 3569
BseJI GATNNNNATC 3 cut(s) 1272, 1760, 3654
BseMI GCAATG 2 cut(s) 1263, 2226
BseMII CTCAG 9 cut(s) 264, 626, 1329, 1826, 1898, 1933, 2309, 2619, 3529
BseNI ACTGG 5 cut(s) 1256, 1657, 1974, 2133, 3731
BsePI GCGCGC 1 cut(s) 341
BseRI GAGGAG 3 cut(s) 76, 482, 2952
BseYI CCCAGC 3 cut(s) 3080, 3088, 3415
BsgI GTGCAG 1 cut(s) 1634
Bsh1236I CGCG 4 cut(s) 242, 343, 509, 895
Bsh1285I CGRYCG 1 cut(s) 246
BshNI GGYRCC 2 cut(s) 554, 1333
BshVI ATCGAT 1 cut(s) 1276
BsiEI CGRYCG 1 cut(s) 246
BsiHKAI GWGCWC 1 cut(s) 678
BsiHKCI CYCGRG 3 cut(s) 575, 751, 2640
BsiSI CCGG 6 cut(s) 364, 393, 427, 465, 2491, 3633
BslFI GGGAC 4 cut(s) 60, 128, 575, 589
BsmAI GTCTC 8 cut(s) 17, 667, 748, 1572, 1650, 2314, 3453, 3521
BsmBI CGTCTC 3 cut(s) 17, 748, 2314
BsmFI GGGAC 4 cut(s) 60, 128, 575, 589
BsmI GAATGC 2 cut(s) 1505, 1773
Bso31I GGTCTC 1 cut(s) 3453
BsoBI CYCGRG 3 cut(s) 575, 751, 2640
Bsp1286I GDGCHC 2 cut(s) 678, 1191
Bsp13I TCCGGA 1 cut(s) 363
Bsp1720I GCTNAGC 1 cut(s) 1587
Bsp19I CCATGG 2 cut(s) 1709, 2145
BspCNI CTCAG 9 cut(s) 263, 625, 1330, 1825, 1897, 1932, 2310, 2618, 3528
BspDI ATCGAT 1 cut(s) 1276
BspEI TCCGGA 1 cut(s) 363
BspFNI CGCG 4 cut(s) 242, 343, 509, 895
BspHI TCATGA 1 cut(s) 1317
BspMAI CTGCAG 1 cut(s) 3220
BspMI ACCTGC 1 cut(s) 3209
BspOI GCTAGC 1 cut(s) 3168
BspPI GGATC 3 cut(s) 2409, 2444, 3237
BspT107I GGYRCC 2 cut(s) 554, 1333
BspTI CTTAAG 1 cut(s) 2621
BspTNI GGTCTC 1 cut(s) 3453
BsrBI CCGCTC 1 cut(s) 174
BsrDI GCAATG 2 cut(s) 1263, 2226
BsrFI RCCGGY 2 cut(s) 392, 2490
BsrI ACTGG 5 cut(s) 1256, 1657, 1974, 2133, 3731
BssAI RCCGGY 2 cut(s) 392, 2490
BssHII GCGCGC 1 cut(s) 341
BssNI GRCGYC 2 cut(s) 396, 555
BssSI CACGAG 2 cut(s) 452, 3687
BssT1I CCWWGG 4 cut(s) 331, 1709, 2145, 3389
Bst2BI CACGAG 2 cut(s) 452, 3687
Bst2UI CCWGG 6 cut(s) 595, 879, 1185, 2831, 3105, 3609
Bst6I CTCTTC 4 cut(s) 53, 1538, 1677, 2917
BstACI GRCGYC 2 cut(s) 396, 555
BstAFI CTTAAG 1 cut(s) 2621
BstDSI CCRYGG 4 cut(s) 507, 1709, 2145, 2995
BstF5I GGATG 9 cut(s) 604, 952, 1201, 1303, 1396, 1823, 2932, 3038, 3569
BstFNI CGCG 4 cut(s) 242, 343, 509, 895
BstH2I RGCGCY 6 cut(s) 491, 546, 558, 635, 3165, 3422
BstMAI GTCTC 8 cut(s) 17, 667, 748, 1572, 1650, 2314, 3453, 3521
BstMCI CGRYCG 1 cut(s) 246
BstNI CCWGG 6 cut(s) 595, 879, 1185, 2831, 3105, 3609
BstNSI RCATGY 7 cut(s) 802, 940, 1217, 1613, 2488, 2498, 3388
BstPAI GACNNNNGTC 1 cut(s) 395
BstSCI CCNGG 7 cut(s) 593, 877, 1183, 2829, 3103, 3607, 3631
BstSFI CTRYAG 4 cut(s) 2475, 3216, 3349, 3426
BstUI CGCG 4 cut(s) 242, 343, 509, 895
BstV2I GAAGAC 3 cut(s) 1161, 1430, 1556
BstX2I RGATCY 2 cut(s) 2134, 2601
BstXI CCANNNNNNTGG 1 cut(s) 3111
BstYI RGATCY 2 cut(s) 2134, 2601
Bsu15I ATCGAT 1 cut(s) 1276
Bsu36I CCTNAGG 1 cut(s) 2196
BsuTUI ATCGAT 1 cut(s) 1276
BtgI CCRYGG 4 cut(s) 507, 1709, 2145, 2995
BtrI CACGTC 1 cut(s) 831
BtsCI GGATG 9 cut(s) 604, 952, 1201, 1303, 1396, 1823, 2932, 3038, 3569
BtsI GCAGTG 4 cut(s) 234, 1581, 2088, 2620
BveI ACCTGC 1 cut(s) 3209
CaiI CAGNNNCTG 1 cut(s) 1926
CciI TCATGA 1 cut(s) 1317
Cfr10I RCCGGY 2 cut(s) 392, 2490
Cfr42I CCGCGG 1 cut(s) 510
ClaI ATCGAT 1 cut(s) 1276
CpoI CGGWCCG 1 cut(s) 429
CseI GACGC 2 cut(s) 385, 2828
Csp6I GTAC 5 cut(s) 1023, 1802, 2718, 3461, 3587
CspI CGGWCCG 1 cut(s) 429
CviQI GTAC 5 cut(s) 1023, 1802, 2718, 3461, 3587
DinI GGCGCC 1 cut(s) 556
DraI TTTAAA 1 cut(s) 1942
DrdI GACNNNNNNGTC 1 cut(s) 659
DriI GACNNNNNGTC 1 cut(s) 301
DseDI GACNNNNNNGTC 1 cut(s) 659
EaeI YGGCCR 3 cut(s) 510, 624, 3101
Eam1104I CTCTTC 4 cut(s) 53, 1538, 1677, 2917
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 4 cut(s) 53, 1538, 1677, 2917
EciI GGCGGA 7 cut(s) 79, 138, 340, 433, 632, 2149, 2460
Eco130I CCWWGG 4 cut(s) 331, 1709, 2145, 3389
Eco147I AGGCCT 1 cut(s) 685
Eco24I GRGCYC 1 cut(s) 1191
Eco31I GGTCTC 1 cut(s) 3453
Eco47I GGWCC 7 cut(s) 429, 457, 589, 603, 1790, 3629, 3708
Eco47III AGCGCT 1 cut(s) 633
Eco57I CTGAAG 5 cut(s) 1155, 1554, 2274, 2421, 3161
Eco81I CCTNAGG 1 cut(s) 2196
Eco88I CYCGRG 3 cut(s) 575, 751, 2640
EcoO109I RGGNCCY 2 cut(s) 603, 3002
EcoRI GAATTC 1 cut(s) 1072
EcoRII CCWGG 6 cut(s) 593, 877, 1183, 2829, 3103, 3607
EcoT14I CCWWGG 4 cut(s) 331, 1709, 2145, 3389
EcoT22I ATGCAT 1 cut(s) 2932
EcoT38I GRGCYC 1 cut(s) 1191
EgeI GGCGCC 1 cut(s) 556
EheI GGCGCC 1 cut(s) 556
ErhI CCWWGG 4 cut(s) 331, 1709, 2145, 3389
Esp3I CGTCTC 3 cut(s) 17, 748, 2314
FalI AAGNNNNNCTT 2 cut(s) 3038, 3070
FaqI GGGAC 4 cut(s) 60, 128, 575, 589
FauI CCCGC 3 cut(s) 221, 614, 888
FbaI TGATCA 3 cut(s) 2014, 3070, 3655
FokI GGATG 9 cut(s) 611, 959, 1208, 1310, 1403, 1830, 2939, 3025, 3576
FriOI GRGCYC 1 cut(s) 1191
FspAI RTGCGCAY 1 cut(s) 3677
FspBI CTAG 6 cut(s) 2078, 2093, 2457, 2502, 2916, 3165
FspI TGCGCA 2 cut(s) 2040, 3677
GsaI CCCAGC 3 cut(s) 3084, 3092, 3419
GsuI CTGGAG 4 cut(s) 79, 160, 567, 1674
HaeII RGCGCY 6 cut(s) 491, 546, 558, 635, 3165, 3422
HapII CCGG 6 cut(s) 364, 393, 427, 465, 2491, 3633
HgaI GACGC 2 cut(s) 385, 2828
Hin1I GRCGYC 2 cut(s) 396, 555
HincII GTYRAC 4 cut(s) 1211, 1957, 2511, 2908
HindII GTYRAC 4 cut(s) 1211, 1957, 2511, 2908
HindIII AAGCTT 1 cut(s) 2562
HpaI GTTAAC 2 cut(s) 2511, 2908
HpaII CCGG 6 cut(s) 364, 393, 427, 465, 2491, 3633
Hpy166II GTNNAC 7 cut(s) 1055, 1211, 1957, 2511, 2908, 3325, 3620
Hpy8I GTNNAC 7 cut(s) 1055, 1211, 1957, 2511, 2908, 3325, 3620
Hpy99I CGWCG 6 cut(s) 33, 278, 281, 299, 326, 563
HpyAV CCTTC 9 cut(s) 879, 923, 923, 2227, 3185, 3490, 3497, 3545, 3580
HpyCH4IV ACGT 2 cut(s) 757, 830
HpySE526I ACGT 2 cut(s) 757, 830
Hsp92I GRCGYC 2 cut(s) 396, 555
KasI GGCGCC 1 cut(s) 554
KflI GGGWCCC 1 cut(s) 603
Kpn2I TCCGGA 1 cut(s) 363
KroI GCCGGC 1 cut(s) 2490
KroNI GCCGGC 1 cut(s) 2492
Ksp22I TGATCA 3 cut(s) 2014, 3070, 3655
KspAI GTTAAC 2 cut(s) 2511, 2908
KspI CCGCGG 1 cut(s) 510
LmnI GCTCC 8 cut(s) 12, 179, 429, 495, 795, 1915, 2956, 3433
LweI GCATC 7 cut(s) 874, 1271, 1288, 1871, 2365, 2917, 2939
MaeI CTAG 6 cut(s) 2078, 2093, 2457, 2502, 2916, 3165
MaeII ACGT 2 cut(s) 757, 830
MbiI CCGCTC 1 cut(s) 174
MfeI CAATTG 3 cut(s) 2676, 3543, 3591
MflI RGATCY 2 cut(s) 2134, 2601
MhlI GDGCHC 2 cut(s) 678, 1191
MlsI TGGCCA 1 cut(s) 3103
MluNI TGGCCA 1 cut(s) 3103
Mly113I GGCGCC 1 cut(s) 555
MlyI GAGTC 7 cut(s) 336, 365, 587, 629, 1999, 3244, 3532
MmeI TCCRAC 5 cut(s) 318, 765, 858, 3316, 3607
Mox20I TGGCCA 1 cut(s) 3103
Mph1103I ATGCAT 1 cut(s) 2932
MroI TCCGGA 1 cut(s) 363
MroNI GCCGGC 1 cut(s) 2490
MscI TGGCCA 1 cut(s) 3103
MslI CAYNNNNRTG 3 cut(s) 966, 1608, 3689
Msp20I TGGCCA 1 cut(s) 3103
MspA1I CMGCKG 5 cut(s) 509, 908, 1175, 2066, 3122
MspCI CTTAAG 1 cut(s) 2621
MspI CCGG 6 cut(s) 364, 393, 427, 465, 2491, 3633
MspR9I CCNGG 7 cut(s) 595, 879, 1185, 2831, 3105, 3609, 3633
MunI CAATTG 3 cut(s) 2676, 3543, 3591
Mva1269I GAATGC 2 cut(s) 1505, 1773
MvaI CCWGG 6 cut(s) 595, 879, 1185, 2831, 3105, 3609
MvnI CGCG 4 cut(s) 242, 343, 509, 895
NaeI GCCGGC 1 cut(s) 2492
NarI GGCGCC 1 cut(s) 555
NciI CCSGG 1 cut(s) 3633
NcoI CCATGG 2 cut(s) 1709, 2145
NgoMIV GCCGGC 1 cut(s) 2490
NheI GCTAGC 1 cut(s) 3164
NmeAIII GCCGAG 4 cut(s) 207, 379, 657, 3052
NsbI TGCGCA 2 cut(s) 2040, 3677
NsiI ATGCAT 1 cut(s) 2932
NspI RCATGY 7 cut(s) 802, 940, 1217, 1613, 2488, 2498, 3388
OliI CACNNNNGTG 1 cut(s) 3689
PaeI GCATGC 3 cut(s) 802, 940, 2498
PaeR7I CTCGAG 3 cut(s) 575, 751, 2640
PagI TCATGA 1 cut(s) 1317
PalAI GGCGCGCC 1 cut(s) 341
PasI CCCWGGG 1 cut(s) 594
PauI GCGCGC 1 cut(s) 341
PceI AGGCCT 1 cut(s) 685
PciI ACATGT 1 cut(s) 1213
PcsI WCGNNNNNNNCGW 1 cut(s) 285
PctI GAATGC 2 cut(s) 1505, 1773
PdiI GCCGGC 1 cut(s) 2492
PflFI GACNNNGTC 1 cut(s) 326
PflMI CCANNNNNTGG 4 cut(s) 337, 2750, 3365, 3705
PfoI TCCNGGA 1 cut(s) 3607
Ple19I CGATCG 1 cut(s) 246
PleI GAGTC 7 cut(s) 335, 364, 586, 628, 1999, 3244, 3532
PluTI GGCGCC 1 cut(s) 558
PpsI GAGTC 7 cut(s) 335, 364, 586, 628, 1999, 3244, 3532
PpuMI RGGWCCY 1 cut(s) 603
PscI ACATGT 1 cut(s) 1213
PshAI GACNNNNGTC 1 cut(s) 395
PsiI TTATAA 3 cut(s) 1949, 2552, 3009
Psp5II RGGWCCY 1 cut(s) 603
Psp6I CCWGG 6 cut(s) 593, 877, 1183, 2829, 3103, 3607
PspFI CCCAGC 3 cut(s) 3080, 3088, 3415
PspGI CCWGG 6 cut(s) 593, 877, 1183, 2829, 3103, 3607
PspPPI RGGWCCY 1 cut(s) 603
PspXI VCTCGAGB 2 cut(s) 575, 2640
PstI CTGCAG 1 cut(s) 3220
PstNI CAGNNNCTG 1 cut(s) 1926
PsuI RGATCY 2 cut(s) 2134, 2601
PsyI GACNNNGTC 1 cut(s) 326
PteI GCGCGC 1 cut(s) 341
PvuI CGATCG 1 cut(s) 246
PvuII CAGCTG 4 cut(s) 908, 1175, 2066, 3122
RgaI GCGATCGC 1 cut(s) 246
RsaI GTAC 5 cut(s) 1024, 1803, 2719, 3462, 3588
RsaNI GTAC 5 cut(s) 1023, 1802, 2718, 3461, 3587
RseI CAYNNNNRTG 3 cut(s) 966, 1608, 3689
Rsr2I CGGWCCG 1 cut(s) 429
RsrII CGGWCCG 1 cut(s) 429
SacII CCGCGG 1 cut(s) 510
SchI GAGTC 7 cut(s) 336, 365, 587, 629, 1999, 3244, 3532
ScrFI CCNGG 7 cut(s) 595, 879, 1185, 2831, 3105, 3609, 3633
SduI GDGCHC 2 cut(s) 678, 1191
SfaAI GCGATCGC 1 cut(s) 246
SfaNI GCATC 7 cut(s) 874, 1271, 1288, 1871, 2365, 2917, 2939
SfcI CTRYAG 4 cut(s) 2475, 3216, 3349, 3426
SfoI GGCGCC 1 cut(s) 556
Sfr274I CTCGAG 3 cut(s) 575, 751, 2640
Sfr303I CCGCGG 1 cut(s) 510
SgfI GCGATCGC 1 cut(s) 246
SgrBI CCGCGG 1 cut(s) 510
SgsI GGCGCGCC 1 cut(s) 341
SinI GGWCC 7 cut(s) 429, 457, 589, 603, 1790, 3629, 3708
SlaI CTCGAG 3 cut(s) 575, 751, 2640
SmiMI CAYNNNNRTG 3 cut(s) 966, 1608, 3689
SmlI CTYRAG 8 cut(s) 575, 706, 751, 2390, 2579, 2621, 2640, 3139
SmoI CTYRAG 8 cut(s) 575, 706, 751, 2390, 2579, 2621, 2640, 3139
SphI GCATGC 3 cut(s) 802, 940, 2498
SseBI AGGCCT 1 cut(s) 685
SspDI GGCGCC 1 cut(s) 554
SspI AATATT 1 cut(s) 2416
SspMI CTAG 6 cut(s) 2078, 2093, 2457, 2502, 2916, 3165
StuI AGGCCT 1 cut(s) 685
StyD4I CCNGG 7 cut(s) 593, 877, 1183, 2829, 3103, 3607, 3631
StyI CCWWGG 4 cut(s) 331, 1709, 2145, 3389
TaiI ACGT 2 cut(s) 760, 833
TaqI TCGA 8 cut(s) 108, 576, 752, 768, 1276, 2404, 2641, 3232
TatI WGTACW 1 cut(s) 3460
TauI GCSGC 8 cut(s) 174, 242, 488, 512, 525, 533, 555, 2063
TspDTI ATGAA 5 cut(s) 1556, 1970, 2574, 2826, 3683
TspGWI ACGGA 6 cut(s) 339, 397, 421, 449, 1555, 2984
Tth111I GACNNNGTC 1 cut(s) 326
Van91I CCANNNNNTGG 4 cut(s) 337, 2750, 3365, 3705
Vha464I CTTAAG 1 cut(s) 2621
VpaK11BI GGWCC 7 cut(s) 429, 457, 589, 603, 1790, 3629, 3708
XapI RAATTY 2 cut(s) 1072, 1842
XceI RCATGY 7 cut(s) 802, 940, 1217, 1613, 2488, 2498, 3388
XcmI CCANNNNNNNNNTGG 1 cut(s) 1233
XhoI CTCGAG 3 cut(s) 575, 751, 2640
XspI CTAG 6 cut(s) 2078, 2093, 2457, 2502, 2916, 3165
Zsp2I ATGCAT 1 cut(s) 2932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.