MMS19 nucleotide excision repair protein homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48120 AT5G48120 AT5G48120 |
| fragaria_vesca | FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 |
| malus_domestica | MD09G1202800.v1.1 |
| prunus_persica | Prupe.3G059000_v2.0.a1 Prupe.3G059000_v2.0.a1 |
| pyrus_communis | pycom09g11970 |
| rosa_chinensis | RchiOBHm_Chr2g0140541 |
| rosa_laevigata | RLG00000019876 |
| rosa_multiflora | Rmu_sc0002490.1_g000025 |
| rosa_roxburghii | Rroxscaffold_153G00436650 Rroxscaffold_2G00104710 |
| rosa_rugosa | Rorug02G0363500 |
| rosa_samantha | Rh2AG414400 Rh2BG424300 Rh2CG400800 Rh2DG434300 |
| rosa_wichuraiana | Rw2G033940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1242, 1296 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1088 |
| AccI | GTMKAC | 3 cut(s) | 144, 2286, 3514 |
| AciI | CCGC | 7 cut(s) | 1317, 1571, 2140, 2453, 2940, 3031, 3353 |
| AclWI | GGATC | 4 cut(s) | 635, 650, 2111, 3470 |
| AcoI | YGGCCR | 3 cut(s) | 102, 1605, 3014 |
| AcsI | RAATTY | 7 cut(s) | 184, 1177, 1387, 1417, 2596, 2841, 2996 |
| AcuI | CTGAAG | 3 cut(s) | 1095, 1544, 2997 |
| AcyI | GRCGYC | 1 cut(s) | 3527 |
| AfaI | GTAC | 5 cut(s) | 140, 1986, 2575, 2611, 3447 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 301, 838, 1088, 1227, 1256, 3012 |
| AflIII | ACRYGT | 3 cut(s) | 23, 147, 1544 |
| AjiI | CACGTC | 1 cut(s) | 150 |
| AjnI | CCWGG | 4 cut(s) | 1602, 1681, 2613, 2686 |
| Alw21I | GWGCWC | 4 cut(s) | 286, 415, 1453, 1806 |
| Alw26I | GTCTC | 8 cut(s) | 34, 469, 1899, 1928, 1945, 2388, 3335, 3368 |
| Alw44I | GTGCAC | 2 cut(s) | 411, 1802 |
| AlwI | GGATC | 4 cut(s) | 635, 650, 2111, 3470 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1669, 1943 |
| Ama87I | CYCGRG | 2 cut(s) | 285, 1370 |
| AoxI | GGCC | 4 cut(s) | 102, 1605, 2001, 3014 |
| ApaLI | GTGCAC | 2 cut(s) | 411, 1802 |
| ApeKI | GCWGC | 7 cut(s) | 173, 532, 2537, 2752, 2920, 2942, 3409 |
| ApoI | RAATTY | 7 cut(s) | 184, 1177, 1387, 1417, 2596, 2841, 2996 |
| AseI | ATTAAT | 1 cut(s) | 3324 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 120, 2211 |
| AspS9I | GGNCC | 2 cut(s) | 107, 1079 |
| AsuC2I | CCSGG | 1 cut(s) | 2201 |
| AsuHPI | GGTGA | 3 cut(s) | 247, 3058, 3325 |
| AsuNHI | GCTAGC | 1 cut(s) | 1783 |
| AvaI | CYCGRG | 2 cut(s) | 285, 1370 |
| AvaII | GGWCC | 2 cut(s) | 107, 1079 |
| BaeGI | GKGCMC | 2 cut(s) | 415, 1806 |
| BalI | TGGCCA | 1 cut(s) | 1607 |
| BanII | GRGCYC | 1 cut(s) | 1453 |
| BauI | CACGAG | 2 cut(s) | 200, 1832 |
| Bbv12I | GWGCWC | 4 cut(s) | 286, 415, 1453, 1806 |
| BbvCI | CCTCAGC | 1 cut(s) | 437 |
| BbvI | GCAGC | 7 cut(s) | 160, 544, 2549, 2764, 2929, 2932, 3396 |
| BccI | CCATC | 6 cut(s) | 238, 638, 727, 1229, 2224, 3188 |
| BceAI | ACGGC | 1 cut(s) | 3029 |
| BciT130I | CCWGG | 4 cut(s) | 1604, 1683, 2615, 2688 |
| BciVI | GTATCC | 2 cut(s) | 302, 1298 |
| BclI | TGATCA | 1 cut(s) | 2559 |
| BcnI | CCSGG | 1 cut(s) | 2201 |
| BcoDI | GTCTC | 8 cut(s) | 34, 469, 1899, 1928, 1945, 2388, 3335, 3368 |
| BfaI | CTAG | 7 cut(s) | 338, 450, 1139, 1227, 1784, 2903, 3254 |
| BfmI | CTRYAG | 2 cut(s) | 512, 2943 |
| BfuI | GTATCC | 2 cut(s) | 302, 1298 |
| BglII | AGATCT | 2 cut(s) | 748, 3098 |
| BisI | GCNGC | 8 cut(s) | 174, 533, 1317, 2538, 2753, 2921, 2943, 3410 |
| BlsI | GCNGC | 8 cut(s) | 175, 534, 1318, 2539, 2754, 2922, 2944, 3411 |
| Bme1390I | CCNGG | 5 cut(s) | 1604, 1683, 2201, 2615, 2688 |
| Bme18I | GGWCC | 2 cut(s) | 107, 1079 |
| BmeT110I | CYCGRG | 2 cut(s) | 285, 1370 |
| BmgBI | CACGTC | 1 cut(s) | 150 |
| BmgT120I | GGNCC | 2 cut(s) | 107, 1079 |
| BmrFI | CCNGG | 5 cut(s) | 1604, 1683, 2201, 2615, 2688 |
| BmrI | ACTGGG | 1 cut(s) | 614 |
| BmtI | GCTAGC | 1 cut(s) | 1787 |
| BmuI | ACTGGG | 1 cut(s) | 614 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 816, 848, 1925, 1957 |
| BpmI | CTGGAG | 3 cut(s) | 1704, 1952, 2136 |
| Bpu10I | CCTNAGC | 2 cut(s) | 437, 2541 |
| BpuEI | CTTGAG | 3 cut(s) | 923, 2144, 3178 |
| BpuMI | CCSGG | 1 cut(s) | 2201 |
| BsaAI | YACGTR | 2 cut(s) | 24, 407 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1742, 1827 |
| BsaHI | GRCGYC | 1 cut(s) | 3527 |
| BsaI | GGTCTC | 1 cut(s) | 469 |
| BsaWI | WCCGGW | 1 cut(s) | 15 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 301, 838, 1088, 1227, 1256, 3012 |
| Bse1I | ACTGG | 5 cut(s) | 390, 471, 609, 1935, 2119 |
| Bse3DI | GCAATG | 7 cut(s) | 572, 645, 661, 893, 1584, 1769, 2241 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1742, 1827 |
| BseBI | CCWGG | 4 cut(s) | 1604, 1683, 2615, 2688 |
| BseJI | GATNNNNATC | 2 cut(s) | 1742, 1827 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 301, 838, 1088, 1227, 1256, 3012 |
| BseMI | GCAATG | 7 cut(s) | 572, 645, 661, 893, 1584, 1769, 2241 |
| BseMII | CTCAG | 5 cut(s) | 98, 428, 1935, 2555, 3396 |
| BseNI | ACTGG | 5 cut(s) | 390, 471, 609, 1935, 2119 |
| BseRI | GAGGAG | 1 cut(s) | 454 |
| BseSI | GKGCMC | 2 cut(s) | 415, 1806 |
| BseXI | GCAGC | 7 cut(s) | 160, 544, 2549, 2764, 2929, 2932, 3396 |
| BseYI | CCCAGC | 1 cut(s) | 165 |
| BsgI | GTGCAG | 3 cut(s) | 949, 1653, 3105 |
| Bsh1285I | CGRYCG | 3 cut(s) | 114, 192, 1285 |
| BshFI | GGCC | 4 cut(s) | 104, 1607, 2003, 3016 |
| BsiEI | CGRYCG | 3 cut(s) | 114, 192, 1285 |
| BsiHKAI | GWGCWC | 4 cut(s) | 286, 415, 1453, 1806 |
| BsiHKCI | CYCGRG | 2 cut(s) | 285, 1370 |
| BsiSI | CCGG | 3 cut(s) | 16, 105, 2200 |
| BsiWI | CGTACG | 1 cut(s) | 138 |
| BslFI | GGGAC | 1 cut(s) | 493 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 301, 838, 1088, 1227, 1256, 3012 |
| BsmAI | GTCTC | 8 cut(s) | 34, 469, 1899, 1928, 1945, 2388, 3335, 3368 |
| BsmFI | GGGAC | 1 cut(s) | 493 |
| BsmI | GAATGC | 5 cut(s) | 2081, 2167, 2190, 2923, 3313 |
| BsnI | GGCC | 4 cut(s) | 104, 1607, 2003, 3016 |
| Bso31I | GGTCTC | 1 cut(s) | 469 |
| BsoBI | CYCGRG | 2 cut(s) | 285, 1370 |
| Bsp1286I | GDGCHC | 4 cut(s) | 286, 415, 1453, 1806 |
| Bsp1407I | TGTACA | 1 cut(s) | 1984 |
| Bsp143I | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| Bsp19I | CCATGG | 4 cut(s) | 2032, 2099, 2340, 2883 |
| BspACI | CCGC | 7 cut(s) | 1317, 1571, 2140, 2453, 2940, 3031, 3353 |
| BspANI | GGCC | 4 cut(s) | 104, 1607, 2003, 3016 |
| BspCNI | CTCAG | 5 cut(s) | 97, 429, 1936, 2554, 3397 |
| BspHI | TCATGA | 3 cut(s) | 1897, 2226, 2815 |
| BspMAI | CTGCAG | 1 cut(s) | 2947 |
| BspOI | GCTAGC | 1 cut(s) | 1787 |
| BspPI | GGATC | 4 cut(s) | 635, 650, 2111, 3470 |
| BspQI | GCTCTTC | 1 cut(s) | 2202 |
| BspTNI | GGTCTC | 1 cut(s) | 469 |
| BsrDI | GCAATG | 7 cut(s) | 572, 645, 661, 893, 1584, 1769, 2241 |
| BsrGI | TGTACA | 1 cut(s) | 1984 |
| BsrI | ACTGG | 5 cut(s) | 390, 471, 609, 1935, 2119 |
| BssMI | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| BssNI | GRCGYC | 1 cut(s) | 3527 |
| BssSI | CACGAG | 2 cut(s) | 200, 1832 |
| BssT1I | CCWWGG | 6 cut(s) | 2032, 2099, 2340, 2583, 2731, 2883 |
| Bst2BI | CACGAG | 2 cut(s) | 200, 1832 |
| Bst2UI | CCWGG | 4 cut(s) | 1604, 1683, 2615, 2688 |
| Bst4CI | ACNGT | 9 cut(s) | 223, 1651, 1939, 2084, 2300, 2609, 2862, 2912, 3245 |
| Bst6I | CTCTTC | 4 cut(s) | 1992, 2202, 2359, 3046 |
| BstACI | GRCGYC | 1 cut(s) | 3527 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1001, 3361 |
| BstAUI | TGTACA | 1 cut(s) | 1984 |
| BstBAI | YACGTR | 2 cut(s) | 24, 407 |
| BstC8I | GCNNGC | 9 cut(s) | 171, 178, 522, 1059, 1262, 1483, 1671, 1785, 2244 |
| BstDEI | CTNAG | 8 cut(s) | 84, 437, 1750, 1850, 1944, 2541, 2770, 3405 |
| BstDSI | CCRYGG | 5 cut(s) | 1464, 2032, 2099, 2340, 2883 |
| BstEII | GGTNACC | 1 cut(s) | 1147 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 836, 1254 |
| BstKTI | GATC | 8 cut(s) | 630, 658, 751, 2106, 2562, 2725, 3101, 3478 |
| BstMAI | GTCTC | 8 cut(s) | 34, 469, 1899, 1928, 1945, 2388, 3335, 3368 |
| BstMBI | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| BstMCI | CGRYCG | 3 cut(s) | 114, 192, 1285 |
| BstNI | CCWGG | 4 cut(s) | 1604, 1683, 2615, 2688 |
| BstNSI | RCATGY | 8 cut(s) | 1004, 1034, 1277, 1485, 1541, 1548, 1558, 2882 |
| BstPI | GGTNACC | 1 cut(s) | 1147 |
| BstSCI | CCNGG | 5 cut(s) | 1602, 1681, 2199, 2613, 2686 |
| BstSFI | CTRYAG | 2 cut(s) | 512, 2943 |
| BstSLI | GKGCMC | 2 cut(s) | 415, 1806 |
| BstV1I | GCAGC | 7 cut(s) | 160, 544, 2549, 2764, 2929, 2932, 3396 |
| BstX2I | RGATCY | 4 cut(s) | 627, 655, 748, 3098 |
| BstYI | RGATCY | 4 cut(s) | 627, 655, 748, 3098 |
| BsuI | GTATCC | 2 cut(s) | 302, 1298 |
| BsuRI | GGCC | 4 cut(s) | 104, 1607, 2003, 3016 |
| BtgI | CCRYGG | 5 cut(s) | 1464, 2032, 2099, 2340, 2883 |
| BtrI | CACGTC | 1 cut(s) | 150 |
| BtsI | GCAGTG | 2 cut(s) | 431, 961 |
| BtsIMutI | CAGTG | 7 cut(s) | 431, 478, 602, 961, 1029, 2166, 2305 |
| Cac8I | GCNNGC | 9 cut(s) | 171, 178, 522, 1059, 1262, 1483, 1671, 1785, 2244 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1669, 1943 |
| CciI | TCATGA | 3 cut(s) | 1897, 2226, 2815 |
| Cfr13I | GGNCC | 2 cut(s) | 107, 1079 |
| CpoI | CGGWCCG | 1 cut(s) | 107 |
| CseI | GACGC | 1 cut(s) | 3516 |
| Csp6I | GTAC | 5 cut(s) | 139, 1985, 2574, 2610, 3446 |
| CspI | CGGWCCG | 1 cut(s) | 107 |
| CviQI | GTAC | 5 cut(s) | 139, 1985, 2574, 2610, 3446 |
| DdeI | CTNAG | 8 cut(s) | 84, 437, 1750, 1850, 1944, 2541, 2770, 3405 |
| DpnI | GATC | 8 cut(s) | 629, 657, 750, 2105, 2561, 2724, 3100, 3477 |
| DpnII | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| DraI | TTTAAA | 1 cut(s) | 2679 |
| EaeI | YGGCCR | 3 cut(s) | 102, 1605, 3014 |
| Eam1104I | CTCTTC | 4 cut(s) | 1992, 2202, 2359, 3046 |
| EarI | CTCTTC | 4 cut(s) | 1992, 2202, 2359, 3046 |
| Ecl136II | GAGCTC | 1 cut(s) | 1451 |
| Eco130I | CCWWGG | 6 cut(s) | 2032, 2099, 2340, 2583, 2731, 2883 |
| Eco24I | GRGCYC | 1 cut(s) | 1453 |
| Eco31I | GGTCTC | 1 cut(s) | 469 |
| Eco47I | GGWCC | 2 cut(s) | 107, 1079 |
| Eco53kI | GAGCTC | 1 cut(s) | 1451 |
| Eco57I | CTGAAG | 3 cut(s) | 1095, 1544, 2997 |
| Eco88I | CYCGRG | 2 cut(s) | 285, 1370 |
| Eco91I | GGTNACC | 1 cut(s) | 1147 |
| EcoICRI | GAGCTC | 1 cut(s) | 1451 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 836, 1254 |
| EcoO65I | GGTNACC | 1 cut(s) | 1147 |
| EcoRI | GAATTC | 2 cut(s) | 184, 1417 |
| EcoRII | CCWGG | 4 cut(s) | 1602, 1681, 2613, 2686 |
| EcoT14I | CCWWGG | 6 cut(s) | 2032, 2099, 2340, 2583, 2731, 2883 |
| EcoT22I | ATGCAT | 2 cut(s) | 1828, 2953 |
| EcoT38I | GRGCYC | 1 cut(s) | 1453 |
| ErhI | CCWWGG | 6 cut(s) | 2032, 2099, 2340, 2583, 2731, 2883 |
| FaqI | GGGAC | 1 cut(s) | 493 |
| FauI | CCCGC | 1 cut(s) | 3360 |
| FauNDI | CATATG | 2 cut(s) | 1971, 3357 |
| FbaI | TGATCA | 1 cut(s) | 2559 |
| FblI | GTMKAC | 3 cut(s) | 144, 2286, 3514 |
| Fnu4HI | GCNGC | 8 cut(s) | 174, 533, 1317, 2538, 2753, 2921, 2943, 3410 |
| FriOI | GRGCYC | 1 cut(s) | 1453 |
| Fsp4HI | GCNGC | 8 cut(s) | 174, 533, 1317, 2538, 2753, 2921, 2943, 3410 |
| FspBI | CTAG | 7 cut(s) | 338, 450, 1139, 1227, 1784, 2903, 3254 |
| GluI | GCNGC | 8 cut(s) | 174, 533, 1317, 2538, 2753, 2921, 2943, 3410 |
| GsaI | CCCAGC | 1 cut(s) | 169 |
| GsuI | CTGGAG | 3 cut(s) | 1704, 1952, 2136 |
| HaeIII | GGCC | 4 cut(s) | 104, 1607, 2003, 3016 |
| HapII | CCGG | 3 cut(s) | 16, 105, 2200 |
| HgaI | GACGC | 1 cut(s) | 3516 |
| Hin1I | GRCGYC | 1 cut(s) | 3527 |
| HincII | GTYRAC | 4 cut(s) | 145, 675, 2287, 3515 |
| HindII | GTYRAC | 4 cut(s) | 145, 675, 2287, 3515 |
| HindIII | AAGCTT | 3 cut(s) | 522, 545, 2240 |
| HpaI | GTTAAC | 1 cut(s) | 675 |
| HpaII | CCGG | 3 cut(s) | 16, 105, 2200 |
| HphI | GGTGA | 3 cut(s) | 247, 3058, 3325 |
| Hpy166II | GTNNAC | 7 cut(s) | 145, 413, 675, 1661, 1804, 2287, 3515 |
| Hpy8I | GTNNAC | 7 cut(s) | 145, 413, 675, 1661, 1804, 2287, 3515 |
| Hpy99I | CGWCG | 2 cut(s) | 146, 3519 |
| HpyAV | CCTTC | 8 cut(s) | 171, 305, 832, 1070, 1786, 1837, 2525, 2861 |
| HpyCH4III | ACNGT | 9 cut(s) | 223, 1651, 1939, 2084, 2300, 2609, 2862, 2912, 3245 |
| HpyCH4IV | ACGT | 6 cut(s) | 23, 141, 149, 406, 2379, 3401 |
| HpyF3I | CTNAG | 8 cut(s) | 84, 437, 1750, 1850, 1944, 2541, 2770, 3405 |
| HpySE526I | ACGT | 6 cut(s) | 23, 141, 149, 406, 2379, 3401 |
| Hsp92I | GRCGYC | 1 cut(s) | 3527 |
| Ksp22I | TGATCA | 1 cut(s) | 2559 |
| KspAI | GTTAAC | 1 cut(s) | 675 |
| Kzo9I | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| LguI | GCTCTTC | 1 cut(s) | 2202 |
| LmnI | GCTCC | 4 cut(s) | 980, 1448, 1522, 2253 |
| Lsp1109I | GCAGC | 7 cut(s) | 160, 544, 2549, 2764, 2929, 2932, 3396 |
| MaeI | CTAG | 7 cut(s) | 338, 450, 1139, 1227, 1784, 2903, 3254 |
| MaeII | ACGT | 6 cut(s) | 23, 141, 149, 406, 2379, 3401 |
| MaeIII | GTNAC | 6 cut(s) | 193, 770, 1147, 1269, 2833, 2889 |
| MalI | GATC | 8 cut(s) | 629, 657, 750, 2105, 2561, 2724, 3100, 3477 |
| MboI | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| MfeI | CAATTG | 1 cut(s) | 3531 |
| MflI | RGATCY | 4 cut(s) | 627, 655, 748, 3098 |
| MhlI | GDGCHC | 4 cut(s) | 286, 415, 1453, 1806 |
| MlsI | TGGCCA | 1 cut(s) | 1607 |
| MluNI | TGGCCA | 1 cut(s) | 1607 |
| MlyI | GAGTC | 5 cut(s) | 515, 803, 1844, 2722, 3333 |
| MmeI | TCCRAC | 2 cut(s) | 2386, 3171 |
| Mox20I | TGGCCA | 1 cut(s) | 1607 |
| Mph1103I | ATGCAT | 2 cut(s) | 1828, 2953 |
| MroXI | GAANNNNTTC | 2 cut(s) | 120, 2211 |
| MscI | TGGCCA | 1 cut(s) | 1607 |
| MslI | CAYNNNNRTG | 7 cut(s) | 588, 1751, 1774, 2412, 2453, 2708, 2963 |
| Msp20I | TGGCCA | 1 cut(s) | 1607 |
| MspA1I | CMGCKG | 2 cut(s) | 2942, 3031 |
| MspI | CCGG | 3 cut(s) | 16, 105, 2200 |
| MspR9I | CCNGG | 5 cut(s) | 1604, 1683, 2201, 2615, 2688 |
| MunI | CAATTG | 1 cut(s) | 3531 |
| Mva1269I | GAATGC | 5 cut(s) | 2081, 2167, 2190, 2923, 3313 |
| MvaI | CCWGG | 4 cut(s) | 1604, 1683, 2615, 2688 |
| NciI | CCSGG | 1 cut(s) | 2201 |
| NcoI | CCATGG | 4 cut(s) | 2032, 2099, 2340, 2883 |
| NdeI | CATATG | 2 cut(s) | 1971, 3357 |
| NdeII | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| NheI | GCTAGC | 1 cut(s) | 1783 |
| NsiI | ATGCAT | 2 cut(s) | 1828, 2953 |
| NspI | RCATGY | 8 cut(s) | 1004, 1034, 1277, 1485, 1541, 1548, 1558, 2882 |
| PacI | TTAATTAA | 1 cut(s) | 3324 |
| PaeI | GCATGC | 1 cut(s) | 1485 |
| PaeR7I | CTCGAG | 2 cut(s) | 285, 1370 |
| PagI | TCATGA | 3 cut(s) | 1897, 2226, 2815 |
| PciI | ACATGT | 1 cut(s) | 1544 |
| PciSI | GCTCTTC | 1 cut(s) | 2202 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 198 |
| PctI | GAATGC | 5 cut(s) | 2081, 2167, 2190, 2923, 3313 |
| PdmI | GAANNNNTTC | 2 cut(s) | 120, 2211 |
| Pfl23II | CGTACG | 1 cut(s) | 138 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1088 |
| PfoI | TCCNGGA | 1 cut(s) | 2199 |
| PkrI | GCNGC | 8 cut(s) | 175, 534, 1318, 2539, 2754, 2922, 2944, 3411 |
| PleI | GAGTC | 5 cut(s) | 514, 803, 1843, 2721, 3333 |
| PpsI | GAGTC | 5 cut(s) | 514, 803, 1843, 2721, 3333 |
| Ppu21I | YACGTR | 2 cut(s) | 24, 407 |
| PscI | ACATGT | 1 cut(s) | 1544 |
| PshBI | ATTAAT | 1 cut(s) | 3324 |
| PsiI | TTATAA | 2 cut(s) | 1242, 1296 |
| Psp124BI | GAGCTC | 1 cut(s) | 1453 |
| Psp6I | CCWGG | 4 cut(s) | 1602, 1681, 2613, 2686 |
| PspEI | GGTNACC | 1 cut(s) | 1147 |
| PspFI | CCCAGC | 1 cut(s) | 165 |
| PspGI | CCWGG | 4 cut(s) | 1602, 1681, 2613, 2686 |
| PspLI | CGTACG | 1 cut(s) | 138 |
| PspPI | GGNCC | 2 cut(s) | 107, 1079 |
| PspXI | VCTCGAGB | 1 cut(s) | 285 |
| PstI | CTGCAG | 1 cut(s) | 2947 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1669, 1943 |
| PsuI | RGATCY | 4 cut(s) | 627, 655, 748, 3098 |
| RsaI | GTAC | 5 cut(s) | 140, 1986, 2575, 2611, 3447 |
| RsaNI | GTAC | 5 cut(s) | 139, 1985, 2574, 2610, 3446 |
| RseI | CAYNNNNRTG | 7 cut(s) | 588, 1751, 1774, 2412, 2453, 2708, 2963 |
| Rsr2I | CGGWCCG | 1 cut(s) | 107 |
| RsrII | CGGWCCG | 1 cut(s) | 107 |
| SacI | GAGCTC | 1 cut(s) | 1453 |
| SalI | GTCGAC | 3 cut(s) | 143, 2285, 3513 |
| SapI | GCTCTTC | 1 cut(s) | 2202 |
| SatI | GCNGC | 8 cut(s) | 174, 533, 1317, 2538, 2753, 2921, 2943, 3410 |
| Sau3AI | GATC | 8 cut(s) | 627, 655, 748, 2103, 2559, 2722, 3098, 3475 |
| Sau96I | GGNCC | 2 cut(s) | 107, 1079 |
| SchI | GAGTC | 5 cut(s) | 515, 803, 1844, 2722, 3333 |
| ScrFI | CCNGG | 5 cut(s) | 1604, 1683, 2201, 2615, 2688 |
| SduI | GDGCHC | 4 cut(s) | 286, 415, 1453, 1806 |
| SfcI | CTRYAG | 2 cut(s) | 512, 2943 |
| Sfr274I | CTCGAG | 2 cut(s) | 285, 1370 |
| SinI | GGWCC | 2 cut(s) | 107, 1079 |
| SlaI | CTCGAG | 2 cut(s) | 285, 1370 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 588, 1751, 1774, 2412, 2453, 2708, 2963 |
| SmlI | CTYRAG | 5 cut(s) | 285, 902, 1370, 2123, 3157 |
| SmoI | CTYRAG | 5 cut(s) | 285, 902, 1370, 2123, 3157 |
| SphI | GCATGC | 1 cut(s) | 1485 |
| SsiI | CCGC | 7 cut(s) | 1317, 1571, 2140, 2453, 2940, 3031, 3353 |
| SspI | AATATT | 3 cut(s) | 1246, 1723, 3270 |
| SspMI | CTAG | 7 cut(s) | 338, 450, 1139, 1227, 1784, 2903, 3254 |
| SstI | GAGCTC | 1 cut(s) | 1453 |
| StyD4I | CCNGG | 5 cut(s) | 1602, 1681, 2199, 2613, 2686 |
| StyI | CCWWGG | 6 cut(s) | 2032, 2099, 2340, 2583, 2731, 2883 |
| TaaI | ACNGT | 9 cut(s) | 223, 1651, 1939, 2084, 2300, 2609, 2862, 2912, 3245 |
| TaiI | ACGT | 6 cut(s) | 26, 144, 152, 409, 2382, 3404 |
| TaqI | TCGA | 8 cut(s) | 144, 225, 286, 836, 876, 1371, 2286, 3514 |
| TaqII | GACCGA | 4 cut(s) | 124, 128, 178, 1271 |
| TatI | WGTACW | 1 cut(s) | 1984 |
| TauI | GCSGC | 1 cut(s) | 1319 |
| TscAI | CASTG | 7 cut(s) | 438, 478, 609, 968, 1029, 2173, 2305 |
| TseI | GCWGC | 7 cut(s) | 173, 532, 2537, 2752, 2920, 2942, 3409 |
| TspGWI | ACGGA | 7 cut(s) | 269, 281, 1453, 1745, 2606, 2753, 3193 |
| TspRI | CASTG | 7 cut(s) | 438, 478, 609, 968, 1029, 2173, 2305 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1088 |
| VneI | GTGCAC | 2 cut(s) | 411, 1802 |
| VpaK11BI | GGWCC | 2 cut(s) | 107, 1079 |
| VspI | ATTAAT | 1 cut(s) | 3324 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 836, 1254 |
| XapI | RAATTY | 7 cut(s) | 184, 1177, 1387, 1417, 2596, 2841, 2996 |
| XbaI | TCTAGA | 2 cut(s) | 1138, 2902 |
| XceI | RCATGY | 8 cut(s) | 1004, 1034, 1277, 1485, 1541, 1548, 1558, 2882 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2845, 3103 |
| XhoI | CTCGAG | 2 cut(s) | 285, 1370 |
| XmiI | GTMKAC | 3 cut(s) | 144, 2286, 3514 |
| XmnI | GAANNNNTTC | 2 cut(s) | 120, 2211 |
| XspI | CTAG | 7 cut(s) | 338, 450, 1139, 1227, 1784, 2903, 3254 |
| Zsp2I | ATGCAT | 2 cut(s) | 1828, 2953 |