MMS19 nucleotide excision repair protein homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48120 AT5G48120 AT5G48120 |
| fragaria_vesca | FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 FvH4_6g32400 |
| malus_domestica | MD09G1202800.v1.1 |
| prunus_persica | Prupe.3G059000_v2.0.a1 Prupe.3G059000_v2.0.a1 |
| pyrus_communis | pycom09g11970 |
| rosa_chinensis | RchiOBHm_Chr2g0140541 |
| rosa_laevigata | RLG00000019876 |
| rosa_multiflora | Rmu_sc0002490.1_g000025 |
| rosa_roxburghii | Rroxscaffold_153G00436650 Rroxscaffold_2G00104710 |
| rosa_rugosa | Rorug02G0363500 |
| rosa_samantha | Rh2AG414400 Rh2BG424300 Rh2CG400800 Rh2DG434300 |
| rosa_wichuraiana | Rw2G033940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2036 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1489 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 845, 1744 |
| AccI | GTMKAC | 2 cut(s) | 49, 3271 |
| AccII | CGCG | 1 cut(s) | 2673 |
| AciI | CCGC | 3 cut(s) | 2265, 2788, 3042 |
| AclWI | GGATC | 6 cut(s) | 407, 420, 1587, 1865, 2446, 3227 |
| AcsI | RAATTY | 8 cut(s) | 515, 934, 1147, 1177, 1229, 1602, 1776, 2321 |
| AcuI | CTGAAG | 4 cut(s) | 411, 816, 1499, 2094 |
| AdeI | CACNNNGTG | 1 cut(s) | 365 |
| AfaI | GTAC | 5 cut(s) | 1291, 2284, 2329, 2365, 2943 |
| AfeI | AGCGCT | 1 cut(s) | 885 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 595, 845, 1016, 1089, 1744 |
| AflIII | ACRYGT | 1 cut(s) | 1304 |
| AgeI | ACCGGT | 1 cut(s) | 271 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 142 |
| AjnI | CCWGG | 1 cut(s) | 1432 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 828, 860, 2469, 2501, 2803, 2835, 2930, 2962 |
| Alw21I | GWGCWC | 5 cut(s) | 43, 172, 1213, 1557, 2059 |
| Alw26I | GTCTC | 6 cut(s) | 193, 226, 1295, 1650, 3092, 3125 |
| Alw44I | GTGCAC | 2 cut(s) | 168, 1553 |
| AlwI | GGATC | 6 cut(s) | 407, 420, 1587, 1865, 2446, 3227 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1694, 3205 |
| Aor51HI | AGCGCT | 1 cut(s) | 885 |
| AoxI | GGCC | 5 cut(s) | 482, 1596, 1712, 1873, 2046 |
| ApaLI | GTGCAC | 2 cut(s) | 168, 1553 |
| ApeKI | GCWGC | 6 cut(s) | 1238, 2291, 2677, 2699, 2785, 3166 |
| ApoI | RAATTY | 8 cut(s) | 515, 934, 1147, 1177, 1229, 1602, 1776, 2321 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1767, 1799 |
| AseI | ATTAAT | 2 cut(s) | 2903, 3077 |
| AsiGI | ACCGGT | 1 cut(s) | 271 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2175, 2976 |
| AspLEI | GCGC | 3 cut(s) | 886, 1333, 2881 |
| AspS9I | GGNCC | 3 cut(s) | 457, 482, 1597 |
| AsuHPI | GGTGA | 4 cut(s) | 377, 898, 2645, 3082 |
| AsuII | TTCGAA | 1 cut(s) | 1098 |
| AsuNHI | GCTAGC | 1 cut(s) | 1534 |
| AvaII | GGWCC | 1 cut(s) | 457 |
| BaeGI | GKGCMC | 2 cut(s) | 172, 1557 |
| BamHI | GGATCC | 1 cut(s) | 412 |
| BanII | GRGCYC | 3 cut(s) | 1213, 2059, 2472 |
| BauI | CACGAG | 1 cut(s) | 42 |
| BbsI | GAAGAC | 2 cut(s) | 375, 1487 |
| Bbv12I | GWGCWC | 5 cut(s) | 43, 172, 1213, 1557, 2059 |
| BbvCI | CCTCAGC | 1 cut(s) | 194 |
| BbvI | GCAGC | 6 cut(s) | 1225, 2303, 2664, 2711, 2797, 3153 |
| BccI | CCATC | 8 cut(s) | 26, 395, 484, 1978, 2341, 2417, 2531, 2945 |
| BceAI | ACGGC | 1 cut(s) | 380 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 3267 |
| BciT130I | CCWGG | 1 cut(s) | 1434 |
| BcoDI | GTCTC | 6 cut(s) | 193, 226, 1295, 1650, 3092, 3125 |
| BfmI | CTRYAG | 2 cut(s) | 1293, 2799 |
| BfoI | RGCGCY | 1 cut(s) | 887 |
| BglII | AGATCT | 2 cut(s) | 505, 2855 |
| BisI | GCNGC | 6 cut(s) | 1239, 2292, 2678, 2700, 2786, 3167 |
| BlpI | GCTNAGC | 1 cut(s) | 184 |
| BlsI | GCNGC | 6 cut(s) | 1240, 2293, 2679, 2701, 2787, 3168 |
| BmcAI | AGTACT | 1 cut(s) | 2943 |
| Bme1390I | CCNGG | 1 cut(s) | 1434 |
| Bme18I | GGWCC | 1 cut(s) | 457 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 142 |
| BmgT120I | GGNCC | 3 cut(s) | 457, 482, 1597 |
| BmiI | GGNNCC | 2 cut(s) | 414, 483 |
| BmrFI | CCNGG | 1 cut(s) | 1434 |
| BmrI | ACTGGG | 1 cut(s) | 371 |
| BmtI | GCTAGC | 1 cut(s) | 1538 |
| BmuI | ACTGGG | 1 cut(s) | 371 |
| BpiI | GAAGAC | 2 cut(s) | 375, 1487 |
| BpmI | CTGGAG | 3 cut(s) | 1151, 1890, 2271 |
| Bpu10I | CCTNAGC | 3 cut(s) | 194, 1351, 2295 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 184 |
| Bpu14I | TTCGAA | 1 cut(s) | 1098 |
| BpuEI | CTTGAG | 4 cut(s) | 680, 1632, 1898, 2935 |
| Bsa29I | ATCGAT | 3 cut(s) | 1860, 1894, 3287 |
| BsaAI | YACGTR | 1 cut(s) | 164 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1578 |
| BsaJI | CCNNGG | 6 cut(s) | 1074, 1432, 1738, 1786, 2094, 2485 |
| BsaWI | WCCGGW | 1 cut(s) | 271 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2873, 2903 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 595, 845, 1016, 1089, 1744 |
| Bse118I | RCCGGY | 1 cut(s) | 271 |
| Bse1I | ACTGG | 6 cut(s) | 228, 366, 1686, 1873, 2533, 2667 |
| Bse3DI | GCAATG | 4 cut(s) | 418, 1233, 1995, 2385 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1578 |
| BseBI | CCWGG | 1 cut(s) | 1434 |
| BseCI | ATCGAT | 3 cut(s) | 1860, 1894, 3287 |
| BseDI | CCNNGG | 6 cut(s) | 1074, 1432, 1738, 1786, 2094, 2485 |
| BseGI | GGATG | 8 cut(s) | 12, 589, 955, 1047, 2104, 2333, 2428, 2956 |
| BseJI | GATNNNNATC | 1 cut(s) | 1578 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 595, 845, 1016, 1089, 1744 |
| BseMI | GCAATG | 4 cut(s) | 418, 1233, 1995, 2385 |
| BseMII | CTCAG | 6 cut(s) | 185, 1269, 1686, 2309, 2631, 3153 |
| BseNI | ACTGG | 6 cut(s) | 228, 366, 1686, 1873, 2533, 2667 |
| BseRI | GAGGAG | 1 cut(s) | 211 |
| BseSI | GKGCMC | 2 cut(s) | 172, 1557 |
| BseXI | GCAGC | 6 cut(s) | 1225, 2303, 2664, 2711, 2797, 3153 |
| BsgI | GTGCAG | 1 cut(s) | 2718 |
| Bsh1236I | CGCG | 1 cut(s) | 2673 |
| BshFI | GGCC | 5 cut(s) | 484, 1598, 1714, 1875, 2048 |
| BshTI | ACCGGT | 1 cut(s) | 271 |
| BshVI | ATCGAT | 3 cut(s) | 1860, 1894, 3287 |
| BsiHKAI | GWGCWC | 5 cut(s) | 43, 172, 1213, 1557, 2059 |
| BsiSI | CCGG | 1 cut(s) | 272 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 595, 845, 1016, 1089, 1744 |
| BsmAI | GTCTC | 6 cut(s) | 193, 226, 1295, 1650, 3092, 3125 |
| BsmI | GAATGC | 5 cut(s) | 329, 611, 1835, 2818, 3070 |
| BsnI | GGCC | 5 cut(s) | 484, 1598, 1714, 1875, 2048 |
| Bsp119I | TTCGAA | 1 cut(s) | 1098 |
| Bsp1286I | GDGCHC | 6 cut(s) | 43, 172, 1213, 1557, 2059, 2472 |
| Bsp1407I | TGTACA | 1 cut(s) | 2363 |
| Bsp143I | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 184 |
| Bsp19I | CCATGG | 3 cut(s) | 1074, 1786, 2094 |
| Bsp68I | TCGCGA | 1 cut(s) | 2673 |
| BspACI | CCGC | 3 cut(s) | 2265, 2788, 3042 |
| BspANI | GGCC | 5 cut(s) | 484, 1598, 1714, 1875, 2048 |
| BspCNI | CTCAG | 6 cut(s) | 186, 1270, 1687, 2308, 2632, 3154 |
| BspDI | ATCGAT | 3 cut(s) | 1860, 1894, 3287 |
| BspFNI | CGCG | 1 cut(s) | 2673 |
| BspHI | TCATGA | 5 cut(s) | 988, 1257, 1582, 2569, 2934 |
| BspLI | GGNNCC | 2 cut(s) | 414, 483 |
| BspMAI | CTGCAG | 1 cut(s) | 1297 |
| BspOI | GCTAGC | 1 cut(s) | 1538 |
| BspPI | GGATC | 6 cut(s) | 407, 420, 1587, 1865, 2446, 3227 |
| BspT104I | TTCGAA | 1 cut(s) | 1098 |
| BsrDI | GCAATG | 4 cut(s) | 418, 1233, 1995, 2385 |
| BsrFI | RCCGGY | 1 cut(s) | 271 |
| BsrGI | TGTACA | 1 cut(s) | 2363 |
| BsrI | ACTGG | 6 cut(s) | 228, 366, 1686, 1873, 2533, 2667 |
| BssAI | RCCGGY | 1 cut(s) | 271 |
| BssECI | CCNNGG | 6 cut(s) | 1074, 1432, 1738, 1786, 2094, 2485 |
| BssMI | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| BssNAI | GTATAC | 1 cut(s) | 50 |
| BssSI | CACGAG | 1 cut(s) | 42 |
| BssT1I | CCWWGG | 5 cut(s) | 1074, 1738, 1786, 2094, 2485 |
| Bst1107I | GTATAC | 1 cut(s) | 50 |
| Bst2BI | CACGAG | 1 cut(s) | 42 |
| Bst2UI | CCWGG | 1 cut(s) | 1434 |
| Bst4CI | ACNGT | 7 cut(s) | 220, 722, 2105, 2750, 2803, 2946, 3002 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 758, 1760, 2656, 2705 |
| BstAUI | TGTACA | 1 cut(s) | 2363 |
| BstBAI | YACGTR | 1 cut(s) | 164 |
| BstBI | TTCGAA | 1 cut(s) | 1098 |
| BstC8I | GCNNGC | 7 cut(s) | 816, 1022, 1243, 1536, 1998, 2675, 3210 |
| BstDSI | CCRYGG | 3 cut(s) | 1074, 1786, 2094 |
| BstEII | GGTNACC | 1 cut(s) | 904 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 593, 1087 |
| BstF5I | GGATG | 8 cut(s) | 12, 589, 955, 1047, 2104, 2333, 2428, 2956 |
| BstFNI | CGCG | 1 cut(s) | 2673 |
| BstH2I | RGCGCY | 1 cut(s) | 887 |
| BstHHI | GCGC | 3 cut(s) | 886, 1333, 2881 |
| BstKTI | GATC | 8 cut(s) | 387, 415, 508, 1582, 1860, 2441, 2858, 3235 |
| BstMAI | GTCTC | 6 cut(s) | 193, 226, 1295, 1650, 3092, 3125 |
| BstMBI | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| BstNI | CCWGG | 1 cut(s) | 1434 |
| BstNSI | RCATGY | 7 cut(s) | 761, 1037, 1245, 1277, 1308, 1318, 3278 |
| BstPI | GGTNACC | 1 cut(s) | 904 |
| BstSCI | CCNGG | 1 cut(s) | 1432 |
| BstSFI | CTRYAG | 2 cut(s) | 1293, 2799 |
| BstSLI | GKGCMC | 2 cut(s) | 172, 1557 |
| BstUI | CGCG | 1 cut(s) | 2673 |
| BstV1I | GCAGC | 6 cut(s) | 1225, 2303, 2664, 2711, 2797, 3153 |
| BstV2I | GAAGAC | 2 cut(s) | 375, 1487 |
| BstX2I | RGATCY | 4 cut(s) | 412, 505, 2438, 2855 |
| BstYI | RGATCY | 4 cut(s) | 412, 505, 2438, 2855 |
| BstZ17I | GTATAC | 1 cut(s) | 50 |
| Bsu15I | ATCGAT | 3 cut(s) | 1860, 1894, 3287 |
| BsuRI | GGCC | 5 cut(s) | 484, 1598, 1714, 1875, 2048 |
| BsuTUI | ATCGAT | 3 cut(s) | 1860, 1894, 3287 |
| BtgI | CCRYGG | 3 cut(s) | 1074, 1786, 2094 |
| BtgZI | GCGATG | 1 cut(s) | 2222 |
| BtsCI | GGATG | 8 cut(s) | 12, 589, 955, 1047, 2104, 2333, 2428, 2956 |
| BtsI | GCAGTG | 1 cut(s) | 188 |
| BtsIMutI | CAGTG | 7 cut(s) | 188, 235, 359, 2422, 2472, 2526, 2808 |
| BtuMI | TCGCGA | 1 cut(s) | 2673 |
| Cac8I | GCNNGC | 7 cut(s) | 816, 1022, 1243, 1536, 1998, 2675, 3210 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1694, 3205 |
| CciI | TCATGA | 5 cut(s) | 988, 1257, 1582, 2569, 2934 |
| CfoI | GCGC | 3 cut(s) | 886, 1333, 2881 |
| Cfr10I | RCCGGY | 1 cut(s) | 271 |
| Cfr13I | GGNCC | 3 cut(s) | 457, 482, 1597 |
| ClaI | ATCGAT | 3 cut(s) | 1860, 1894, 3287 |
| CseI | GACGC | 2 cut(s) | 575, 2201 |
| Csp6I | GTAC | 5 cut(s) | 1290, 2283, 2328, 2364, 2942 |
| CspAI | ACCGGT | 1 cut(s) | 271 |
| CviQI | GTAC | 5 cut(s) | 1290, 2283, 2328, 2364, 2942 |
| DpnI | GATC | 8 cut(s) | 386, 414, 507, 1581, 1859, 2440, 2857, 3234 |
| DpnII | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| DraIII | CACNNNGTG | 1 cut(s) | 365 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1489 |
| DriI | GACNNNNNGTC | 1 cut(s) | 142 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1489 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 142 |
| Ecl136II | GAGCTC | 2 cut(s) | 1211, 2057 |
| Eco130I | CCWWGG | 5 cut(s) | 1074, 1738, 1786, 2094, 2485 |
| Eco147I | AGGCCT | 2 cut(s) | 1875, 2048 |
| Eco24I | GRGCYC | 3 cut(s) | 1213, 2059, 2472 |
| Eco47I | GGWCC | 1 cut(s) | 457 |
| Eco47III | AGCGCT | 1 cut(s) | 885 |
| Eco53kI | GAGCTC | 2 cut(s) | 1211, 2057 |
| Eco57I | CTGAAG | 4 cut(s) | 411, 816, 1499, 2094 |
| Eco91I | GGTNACC | 1 cut(s) | 904 |
| EcoICRI | GAGCTC | 2 cut(s) | 1211, 2057 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 593, 1087 |
| EcoO65I | GGTNACC | 1 cut(s) | 904 |
| EcoRI | GAATTC | 4 cut(s) | 515, 1147, 1177, 1229 |
| EcoRII | CCWGG | 1 cut(s) | 1432 |
| EcoT14I | CCWWGG | 5 cut(s) | 1074, 1738, 1786, 2094, 2485 |
| EcoT22I | ATGCAT | 2 cut(s) | 2710, 3280 |
| EcoT38I | GRGCYC | 3 cut(s) | 1213, 2059, 2472 |
| ErhI | CCWWGG | 5 cut(s) | 1074, 1738, 1786, 2094, 2485 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1953, 1985, 2541, 2573, 2979, 3011 |
| FauNDI | CATATG | 2 cut(s) | 1722, 3114 |
| FblI | GTMKAC | 2 cut(s) | 49, 3271 |
| Fnu4HI | GCNGC | 6 cut(s) | 1239, 2292, 2678, 2700, 2786, 3167 |
| FokI | GGATG | 8 cut(s) | 19, 596, 962, 1034, 2111, 2320, 2435, 2963 |
| FriOI | GRGCYC | 3 cut(s) | 1213, 2059, 2472 |
| Fsp4HI | GCNGC | 6 cut(s) | 1239, 2292, 2678, 2700, 2786, 3167 |
| GlaI | GCGC | 3 cut(s) | 885, 1332, 2880 |
| GluI | GCNGC | 6 cut(s) | 1239, 2292, 2678, 2700, 2786, 3167 |
| GsuI | CTGGAG | 3 cut(s) | 1151, 1890, 2271 |
| HaeII | RGCGCY | 1 cut(s) | 887 |
| HaeIII | GGCC | 5 cut(s) | 484, 1598, 1714, 1875, 2048 |
| HapII | CCGG | 1 cut(s) | 272 |
| HgaI | GACGC | 2 cut(s) | 575, 2201 |
| HhaI | GCGC | 3 cut(s) | 886, 1333, 2881 |
| Hin6I | GCGC | 3 cut(s) | 884, 1331, 2879 |
| HinP1I | GCGC | 3 cut(s) | 884, 1331, 2879 |
| HindIII | AAGCTT | 5 cut(s) | 302, 921, 1994, 2117, 2993 |
| HpaII | CCGG | 1 cut(s) | 272 |
| HphI | GGTGA | 4 cut(s) | 377, 898, 2645, 3082 |
| Hpy166II | GTNNAC | 8 cut(s) | 50, 170, 621, 1031, 1412, 1555, 2330, 3272 |
| Hpy8I | GTNNAC | 8 cut(s) | 50, 170, 621, 1031, 1412, 1555, 2330, 3272 |
| HpyAV | CCTTC | 7 cut(s) | 573, 589, 1399, 1537, 1588, 2691, 3158 |
| HpyCH4III | ACNGT | 7 cut(s) | 220, 722, 2105, 2750, 2803, 2946, 3002 |
| HpyCH4IV | ACGT | 2 cut(s) | 163, 787 |
| HpySE526I | ACGT | 2 cut(s) | 163, 787 |
| HspAI | GCGC | 3 cut(s) | 884, 1331, 2879 |
| Kzo9I | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| LmnI | GCTCC | 4 cut(s) | 737, 1208, 2054, 2902 |
| Lsp1109I | GCAGC | 6 cut(s) | 1225, 2303, 2664, 2711, 2797, 3153 |
| MaeII | ACGT | 2 cut(s) | 163, 787 |
| MaeIII | GTNAC | 5 cut(s) | 904, 995, 1423, 2587, 2633 |
| MalI | GATC | 8 cut(s) | 386, 414, 507, 1581, 1859, 2440, 2857, 3234 |
| MboI | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| MflI | RGATCY | 4 cut(s) | 412, 505, 2438, 2855 |
| MhlI | GDGCHC | 6 cut(s) | 43, 172, 1213, 1557, 2059, 2472 |
| MlyI | GAGTC | 4 cut(s) | 1477, 1595, 2084, 2630 |
| MmeI | TCCRAC | 1 cut(s) | 2928 |
| Mph1103I | ATGCAT | 2 cut(s) | 2710, 3280 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2175, 2976 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1502, 2207 |
| MspA1I | CMGCKG | 2 cut(s) | 1805, 2788 |
| MspI | CCGG | 1 cut(s) | 272 |
| MspR9I | CCNGG | 1 cut(s) | 1434 |
| Mva1269I | GAATGC | 5 cut(s) | 329, 611, 1835, 2818, 3070 |
| MvaI | CCWGG | 1 cut(s) | 1434 |
| MvnI | CGCG | 1 cut(s) | 2673 |
| NcoI | CCATGG | 3 cut(s) | 1074, 1786, 2094 |
| NdeI | CATATG | 2 cut(s) | 1722, 3114 |
| NdeII | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| NheI | GCTAGC | 1 cut(s) | 1534 |
| NlaIV | GGNNCC | 2 cut(s) | 414, 483 |
| NmuCI | GTSAC | 2 cut(s) | 904, 2633 |
| NruI | TCGCGA | 1 cut(s) | 2673 |
| NsiI | ATGCAT | 2 cut(s) | 2710, 3280 |
| NspI | RCATGY | 7 cut(s) | 761, 1037, 1245, 1277, 1308, 1318, 3278 |
| NspV | TTCGAA | 1 cut(s) | 1098 |
| PaeI | GCATGC | 1 cut(s) | 1245 |
| PagI | TCATGA | 5 cut(s) | 988, 1257, 1582, 2569, 2934 |
| PceI | AGGCCT | 2 cut(s) | 1875, 2048 |
| PciI | ACATGT | 1 cut(s) | 1304 |
| PctI | GAATGC | 5 cut(s) | 329, 611, 1835, 2818, 3070 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2175, 2976 |
| PfeI | GAWTC | 8 cut(s) | 126, 698, 1896, 1937, 2176, 2729, 2840, 3180 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 845, 1744 |
| PinAI | ACCGGT | 1 cut(s) | 271 |
| PkrI | GCNGC | 6 cut(s) | 1240, 2293, 2679, 2701, 2787, 3168 |
| PleI | GAGTC | 4 cut(s) | 1477, 1594, 2084, 2630 |
| PpsI | GAGTC | 4 cut(s) | 1477, 1594, 2084, 2630 |
| Ppu21I | YACGTR | 1 cut(s) | 164 |
| PscI | ACATGT | 1 cut(s) | 1304 |
| PshBI | ATTAAT | 2 cut(s) | 2903, 3077 |
| PsiI | TTATAA | 1 cut(s) | 2036 |
| Psp124BI | GAGCTC | 2 cut(s) | 1213, 2059 |
| Psp6I | CCWGG | 1 cut(s) | 1432 |
| PspEI | GGTNACC | 1 cut(s) | 904 |
| PspGI | CCWGG | 1 cut(s) | 1432 |
| PspN4I | GGNNCC | 2 cut(s) | 414, 483 |
| PspPI | GGNCC | 3 cut(s) | 457, 482, 1597 |
| PstI | CTGCAG | 1 cut(s) | 1297 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1694, 3205 |
| PsuI | RGATCY | 4 cut(s) | 412, 505, 2438, 2855 |
| PvuII | CAGCTG | 1 cut(s) | 1805 |
| RruI | TCGCGA | 1 cut(s) | 2673 |
| RsaI | GTAC | 5 cut(s) | 1291, 2284, 2329, 2365, 2943 |
| RsaNI | GTAC | 5 cut(s) | 1290, 2283, 2328, 2364, 2942 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1502, 2207 |
| SacI | GAGCTC | 2 cut(s) | 1213, 2059 |
| SatI | GCNGC | 6 cut(s) | 1239, 2292, 2678, 2700, 2786, 3167 |
| Sau3AI | GATC | 8 cut(s) | 384, 412, 505, 1579, 1857, 2438, 2855, 3232 |
| Sau96I | GGNCC | 3 cut(s) | 457, 482, 1597 |
| ScaI | AGTACT | 1 cut(s) | 2943 |
| SchI | GAGTC | 4 cut(s) | 1477, 1595, 2084, 2630 |
| ScrFI | CCNGG | 1 cut(s) | 1434 |
| SduI | GDGCHC | 6 cut(s) | 43, 172, 1213, 1557, 2059, 2472 |
| SfcI | CTRYAG | 2 cut(s) | 1293, 2799 |
| SfuI | TTCGAA | 1 cut(s) | 1098 |
| SinI | GGWCC | 1 cut(s) | 457 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1502, 2207 |
| SmlI | CTYRAG | 4 cut(s) | 659, 1647, 1877, 2914 |
| SmoI | CTYRAG | 4 cut(s) | 659, 1647, 1877, 2914 |
| SphI | GCATGC | 1 cut(s) | 1245 |
| SseBI | AGGCCT | 2 cut(s) | 1875, 2048 |
| SsiI | CCGC | 3 cut(s) | 2265, 2788, 3042 |
| SspI | AATATT | 5 cut(s) | 429, 465, 1006, 2247, 3216 |
| SstI | GAGCTC | 2 cut(s) | 1213, 2059 |
| StuI | AGGCCT | 2 cut(s) | 1875, 2048 |
| StyD4I | CCNGG | 1 cut(s) | 1432 |
| StyI | CCWWGG | 5 cut(s) | 1074, 1738, 1786, 2094, 2485 |
| TaaI | ACNGT | 7 cut(s) | 220, 722, 2105, 2750, 2803, 2946, 3002 |
| TaiI | ACGT | 2 cut(s) | 166, 790 |
| TaqI | TCGA | 8 cut(s) | 593, 1098, 1860, 1894, 2495, 3127, 3250, 3287 |
| TatI | WGTACW | 3 cut(s) | 2282, 2363, 2941 |
| TfiI | GAWTC | 8 cut(s) | 126, 698, 1896, 1937, 2176, 2729, 2840, 3180 |
| TscAI | CASTG | 7 cut(s) | 195, 235, 366, 2422, 2479, 2533, 2808 |
| TseFI | GTSAC | 2 cut(s) | 904, 2633 |
| TseI | GCWGC | 6 cut(s) | 1238, 2291, 2677, 2699, 2785, 3166 |
| Tsp45I | GTSAC | 2 cut(s) | 904, 2633 |
| TspGWI | ACGGA | 2 cut(s) | 38, 639 |
| TspRI | CASTG | 7 cut(s) | 195, 235, 366, 2422, 2479, 2533, 2808 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 845, 1744 |
| VneI | GTGCAC | 2 cut(s) | 168, 1553 |
| VpaK11BI | GGWCC | 1 cut(s) | 457 |
| VspI | ATTAAT | 2 cut(s) | 2903, 3077 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 593, 1087 |
| XapI | RAATTY | 8 cut(s) | 515, 934, 1147, 1177, 1229, 1602, 1776, 2321 |
| XbaI | TCTAGA | 2 cut(s) | 728, 2852 |
| XceI | RCATGY | 7 cut(s) | 761, 1037, 1245, 1277, 1308, 1318, 3278 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1072, 2048, 2525 |
| XmiI | GTMKAC | 2 cut(s) | 49, 3271 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2175, 2976 |
| ZrmI | AGTACT | 1 cut(s) | 2943 |
| Zsp2I | ATGCAT | 2 cut(s) | 2710, 3280 |