Rmu_sc0002490.1_g000025

MMS19 nucleotide excision repair protein homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002490.1
Physical Location & Seq
Reverse (-)
103607 .. 115122
11516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002490.1_g000025.1.cds

Sequence Viewer

Length: 3525 bp
atggcgtcaacgagcgaattgactcagcaccttgagtgttacgtcgacacagctcgccctcccgccgaccaggctgcaagcttgaatttcatcacttctcttgtgaacaaggacttattgactattgaagtgctggtgaaagagatgaggatgtatctgaccatcacggataatgttattcgtgctcgtggtatacttcttttggcagaagttcttacaggtctttcatcaaagccactagataatgcaactattcatagcttgataggattcttcacagacaggctgtcagattggagagctttacgtggtgcacttgttggttgcttagcactgctgaggagacaagctaatgctggaactgtctctgccagtgatgcaaaagttgttgctctgtcttacagagagaacctaccggtgcaatctttagctcaacaggacagaaagctttgttttgagcttttggaatgccttttacaacgctatcccaacgaggttgcttcactgggtgaagaccttttctatgcgatctctgaagccgttgatggagaaaaggatcctcattgcttaatattagcatttcatattgttgaggttctggtccaaatatttccagacccatcggggccacttgcaagtttctgtggagatctatttgaattcttgggttgctactttcccattcattttactcatctgaaagatgaggacgctgatgtgagaagggatgacctctcgaaggcactaatgtcagcattctcgtccacagctttatttgagccatttgttattccgttgcttcttgagaaactttcttcttctctgccattagcaaaggttgattctttgaagtatattaactactgtgcatctagatatggagctgaaagaatggcaaaacatgctgaaactatctggatttctataaaacgtgcaataagtaattcattggaagtgcctgctaaatcctttacttcagaaccactacttggtcttggctttcaagagaatgaaattgcaacagaagcgcttattcttctacaaaaggtcaccatgcaaaatgaagctttgtttctaaatttggttgttcgggatgaagatataaacaatgttttcaattccatagctagtcatgaaagttacactaatattcccttgcaaggcaggcagagtttacatgcagttggtcgcatcctttgtatcataaccaagacttccatggcttcctgtaatagggtattcgaaagtttcttcccttgcctaatgaacactctggagatttcaatggggaattcatctaaggattttactcttaatgagaattctttttcctctaaaagatttaattttggagctctttatctctgcgtggaattcattgctgcatgcagagatttaatcatgagaaccaatgaacatgctgagaagtttggtactgcagatgagacatgttgctacatgcttcaaagctctgcgcctacactaatcactaccttagcaaaaagttctaatgatgttgttgatgatgcagatatttatttcaaagtgaagggtttgcaaatgttggttacattccctggatatttcttacaaacaccaacagctatgtttgagaatgttctgaagactctcatgtcaatcatcttggtggattttgacaagtcgttgttatggaagctagcattgaaggctttagtgcacattggctcatttgtggatatggatcatgagtcagagaaggcacaaatctatataagttttgttgttgaaaagactatttcattggtgtctcaagatgattttaatgtgcctttccctctaaaactggaagcagtatctgagattggtgcaagtaggccaaatcatatgctaaaaattgtccaagggctggaagatgcaatagttgccaatttatccaaaatttatgtccatggagatttgaagtcagttgaaaaaacaattcaactttttgaatgctactccaataagattatttcatggatcgatgaaactggaggccttgaggaagttctgtatcgattcgtcattagtatttggaattgcgttgataggtgcaaagattctagcaatcaagtccaagacaaaggacttcttgatgcaacaatgatggcaatgaagcttgctgttgggagttgttcagaggaaagtcaaaacattataatccaaaaggcctatggagctctttcatcgggcatatctattccttttaaggactccatggatgacagttcttcagttaagcttgaaaacttgcacctctccgaacagctagacaagttttcacttagagatgaatggattctttcactatttgcatcagtaatcatagcgatgcgtccaagaactcatattgcaaatgcaaaaggaatattgcatttatttatgaccgcccttgtcaaaggttgtactccagcagctcaggcattgggttctgtgattaacaaatttggtacaccatccaatgaagtagcaacttcaacaggctgtacgttggaagaagcaatggaaattatttttaggtcaaaactatggaatatcactgaggatggagttttaaggggatctggaacaagccacagcagtaaagtggggctcactgaattatgccttgggttttcgagcaataaattgcttcaagtccatgccatcactggactagcatggatagggaaaggtttgcttctaattggtcatgaacaagtaaaagatgttactaaaatcatcttggagtgcctattggcagatgacagaataggtgactctgagttgaggcaaggtctgctagaaaccagtcgcgagctgccttctgtgatgagaagtgcagcagatgcatttcatattcttatgagtgattctgatgtttgtttgaaccgtaagtttcatgcaaaaatacgaccactctacaagcagcggtttttctctacagtgatgccaattttgcattccttgatagtgaaatctgattcatcattatctagatctatgctgtttcgggcatcagcgcacctcatctccaatgctccattaattgttatcttgagtgatgccaagaagctcatgaaagtactgttggatggattgtccatactaagtgaagatattctggataaagataagctttacagtcttttgctagttctatctgggatattgacagataaatgcggagaagaagctgtcctagagaatgcacatatattaattgattgtctcaccagactaattgcctaccctcatatgatgcttgttcgagagacagcaattcaatgccttcttgccatgtctgagctgccccgtcctagaatctttcccctgaaaacacaggttagttgttctatcataacatatgttggtgagcaatactcgtctgagctgccccgtcctagaatctttcccctgaaaacacaggttctgcaagcaatattcaaggctcttgatgatccaaaaagagctgttcgtcaggaagctgttagatgtctacatgcatggacatcgattgcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1174

Amino Acids

130.41

Weight (kDa)

5.73

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2180
AasI GACNNNNNNGTC 1 cut(s) 1633
AccB7I CCANNNNNTGG 2 cut(s) 989, 1888
AccI GTMKAC 3 cut(s) 45, 193, 3499
AccII CGCG 1 cut(s) 2817
AciI CCGC 4 cut(s) 63, 2409, 2932, 3186
AclWI GGATC 6 cut(s) 551, 564, 1731, 2009, 2590, 3455
AcsI RAATTY 8 cut(s) 85, 659, 1078, 1291, 1321, 1373, 1920, 2465
AcuI CTGAAG 4 cut(s) 555, 960, 1643, 2238
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 509
AfaI GTAC 5 cut(s) 1435, 2428, 2473, 2509, 3087
AfeI AGCGCT 1 cut(s) 1029
AfiI CCNNNNNNNGG 5 cut(s) 739, 989, 1160, 1233, 1888
AflIII ACRYGT 1 cut(s) 1448
AgeI ACCGGT 1 cut(s) 415
AhdI GACNNNNNGTC 1 cut(s) 286
AjnI CCWGG 2 cut(s) 69, 1576
AjuI GAANNNNNNNTTGG 8 cut(s) 972, 1004, 2613, 2645, 2947, 2979, 3074, 3106
Alw21I GWGCWC 5 cut(s) 187, 316, 1357, 1701, 2203
Alw26I GTCTC 6 cut(s) 337, 370, 1439, 1794, 3236, 3269
Alw44I GTGCAC 2 cut(s) 312, 1697
AlwI GGATC 6 cut(s) 551, 564, 1731, 2009, 2590, 3455
AlwNI CAGNNNCTG 2 cut(s) 1838, 3433
Aor51HI AGCGCT 1 cut(s) 1029
AoxI GGCC 4 cut(s) 626, 1856, 2017, 2190
ApaLI GTGCAC 2 cut(s) 312, 1697
ApeKI GCWGC 8 cut(s) 74, 1382, 2435, 2821, 2843, 2929, 3310, 3394
ApoI RAATTY 8 cut(s) 85, 659, 1078, 1291, 1321, 1373, 1920, 2465
ArsI GACNNNNNNTTYG 2 cut(s) 1911, 1943
AseI ATTAAT 2 cut(s) 3047, 3221
AsiGI ACCGGT 1 cut(s) 415
Asp700I GAANNNNTTC 2 cut(s) 2319, 3120
AspLEI GCGC 3 cut(s) 1030, 1477, 3025
AspS9I GGNCC 2 cut(s) 601, 626
AsuHPI GGTGA 6 cut(s) 148, 521, 1042, 2789, 3226, 3386
AsuII TTCGAA 1 cut(s) 1242
AsuNHI GCTAGC 1 cut(s) 1678
AvaII GGWCC 1 cut(s) 601
BaeGI GKGCMC 2 cut(s) 316, 1701
BamHI GGATCC 1 cut(s) 556
BanII GRGCYC 3 cut(s) 1357, 2203, 2616
BauI CACGAG 1 cut(s) 186
BbsI GAAGAC 2 cut(s) 519, 1631
Bbv12I GWGCWC 5 cut(s) 187, 316, 1357, 1701, 2203
BbvCI CCTCAGC 1 cut(s) 338
BbvI GCAGC 8 cut(s) 61, 1369, 2447, 2808, 2855, 2941, 3297, 3381
BccI CCATC 8 cut(s) 170, 539, 628, 2122, 2485, 2561, 2675, 3089
BceAI ACGGC 1 cut(s) 524
BcgI CGANNNNNNTGC 3 cut(s) 56, 90, 3495
BciT130I CCWGG 2 cut(s) 71, 1578
BcoDI GTCTC 6 cut(s) 337, 370, 1439, 1794, 3236, 3269
BfmI CTRYAG 2 cut(s) 1437, 2943
BfoI RGCGCY 1 cut(s) 1031
BglI GCCNNNNNGGC 1 cut(s) 71
BglII AGATCT 2 cut(s) 649, 2999
BisI GCNGC 8 cut(s) 75, 1383, 2436, 2822, 2844, 2930, 3311, 3395
BlpI GCTNAGC 1 cut(s) 328
BlsI GCNGC 8 cut(s) 76, 1384, 2437, 2823, 2845, 2931, 3312, 3396
BmcAI AGTACT 1 cut(s) 3087
Bme1390I CCNGG 2 cut(s) 71, 1578
Bme18I GGWCC 1 cut(s) 601
BmeRI GACNNNNNGTC 1 cut(s) 286
BmgT120I GGNCC 2 cut(s) 601, 626
BmiI GGNNCC 2 cut(s) 558, 627
BmrFI CCNGG 2 cut(s) 71, 1578
BmrI ACTGGG 1 cut(s) 515
BmtI GCTAGC 1 cut(s) 1682
BmuI ACTGGG 1 cut(s) 515
BpiI GAAGAC 2 cut(s) 519, 1631
BplI GAGNNNNNCTC 2 cut(s) 3368, 3400
BpmI CTGGAG 3 cut(s) 1295, 2034, 2415
Bpu10I CCTNAGC 3 cut(s) 338, 1495, 2439
Bpu1102I GCTNAGC 1 cut(s) 328
Bpu14I TTCGAA 1 cut(s) 1242
BpuEI CTTGAG 5 cut(s) 53, 824, 1776, 2042, 3079
Bsa29I ATCGAT 3 cut(s) 2004, 2038, 3515
BsaAI YACGTR 1 cut(s) 308
BsaBI GATNNNNATC 1 cut(s) 1722
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 6 cut(s) 1218, 1576, 1882, 1930, 2238, 2629
BsaWI WCCGGW 1 cut(s) 415
BsaXI ACNNNNNCTCC 2 cut(s) 3017, 3047
Bsc4I CCNNNNNNNGG 5 cut(s) 739, 989, 1160, 1233, 1888
Bse118I RCCGGY 1 cut(s) 415
Bse1I ACTGG 6 cut(s) 372, 510, 1830, 2017, 2677, 2811
Bse3DI GCAATG 4 cut(s) 562, 1377, 2139, 2529
Bse8I GATNNNNATC 1 cut(s) 1722
BseBI CCWGG 2 cut(s) 71, 1578
BseCI ATCGAT 3 cut(s) 2004, 2038, 3515
BseDI CCNNGG 6 cut(s) 1218, 1576, 1882, 1930, 2238, 2629
BseGI GGATG 8 cut(s) 156, 733, 1099, 1191, 2248, 2477, 2572, 3100
BseJI GATNNNNATC 1 cut(s) 1722
BseLI CCNNNNNNNGG 5 cut(s) 739, 989, 1160, 1233, 1888
BseMI GCAATG 4 cut(s) 562, 1377, 2139, 2529
BseMII CTCAG 9 cut(s) 38, 329, 1413, 1830, 2453, 2553, 2775, 3297, 3381
BseNI ACTGG 6 cut(s) 372, 510, 1830, 2017, 2677, 2811
BseRI GAGGAG 1 cut(s) 355
BseSI GKGCMC 2 cut(s) 316, 1701
BseXI GCAGC 8 cut(s) 61, 1369, 2447, 2808, 2855, 2941, 3297, 3381
BsgI GTGCAG 1 cut(s) 2862
Bsh1236I CGCG 1 cut(s) 2817
BshFI GGCC 4 cut(s) 628, 1858, 2019, 2192
BshTI ACCGGT 1 cut(s) 415
BshVI ATCGAT 3 cut(s) 2004, 2038, 3515
BsiHKAI GWGCWC 5 cut(s) 187, 316, 1357, 1701, 2203
BsiSI CCGG 1 cut(s) 416
BslI CCNNNNNNNGG 5 cut(s) 739, 989, 1160, 1233, 1888
BsmAI GTCTC 6 cut(s) 337, 370, 1439, 1794, 3236, 3269
BsmI GAATGC 5 cut(s) 473, 755, 1979, 2962, 3214
BsnI GGCC 4 cut(s) 628, 1858, 2019, 2192
Bsp119I TTCGAA 1 cut(s) 1242
Bsp1286I GDGCHC 6 cut(s) 187, 316, 1357, 1701, 2203, 2616
Bsp143I GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
Bsp1720I GCTNAGC 1 cut(s) 328
Bsp19I CCATGG 3 cut(s) 1218, 1930, 2238
Bsp68I TCGCGA 1 cut(s) 2817
BspACI CCGC 4 cut(s) 63, 2409, 2932, 3186
BspANI GGCC 4 cut(s) 628, 1858, 2019, 2192
BspCNI CTCAG 9 cut(s) 37, 330, 1414, 1831, 2452, 2554, 2776, 3298, 3382
BspDI ATCGAT 3 cut(s) 2004, 2038, 3515
BspFNI CGCG 1 cut(s) 2817
BspHI TCATGA 5 cut(s) 1132, 1401, 1726, 2713, 3078
BspLI GGNNCC 2 cut(s) 558, 627
BspMAI CTGCAG 1 cut(s) 1441
BspOI GCTAGC 1 cut(s) 1682
BspPI GGATC 6 cut(s) 551, 564, 1731, 2009, 2590, 3455
BspT104I TTCGAA 1 cut(s) 1242
BsrDI GCAATG 4 cut(s) 562, 1377, 2139, 2529
BsrFI RCCGGY 1 cut(s) 415
BsrI ACTGG 6 cut(s) 372, 510, 1830, 2017, 2677, 2811
BssAI RCCGGY 1 cut(s) 415
BssECI CCNNGG 6 cut(s) 1218, 1576, 1882, 1930, 2238, 2629
BssMI GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
BssNAI GTATAC 1 cut(s) 194
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 186
BssT1I CCWWGG 5 cut(s) 1218, 1882, 1930, 2238, 2629
Bst1107I GTATAC 1 cut(s) 194
Bst2BI CACGAG 1 cut(s) 186
Bst2UI CCWGG 2 cut(s) 71, 1578
Bst4CI ACNGT 7 cut(s) 364, 866, 2249, 2894, 2947, 3090, 3146
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 4 cut(s) 902, 1904, 2800, 2849
BstBAI YACGTR 1 cut(s) 308
BstBI TTCGAA 1 cut(s) 1242
BstC8I GCNNGC 9 cut(s) 55, 79, 960, 1166, 1387, 1680, 2142, 2819, 3438
BstDSI CCRYGG 3 cut(s) 1218, 1930, 2238
BstEII GGTNACC 1 cut(s) 1048
BstENI CCTNNNNNAGG 2 cut(s) 737, 1231
BstF5I GGATG 8 cut(s) 156, 733, 1099, 1191, 2248, 2477, 2572, 3100
BstFNI CGCG 1 cut(s) 2817
BstH2I RGCGCY 1 cut(s) 1031
BstHHI GCGC 3 cut(s) 1030, 1477, 3025
BstKTI GATC 8 cut(s) 531, 559, 652, 1726, 2004, 2585, 3002, 3463
BstMAI GTCTC 6 cut(s) 337, 370, 1439, 1794, 3236, 3269
BstMBI GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
BstNI CCWGG 2 cut(s) 71, 1578
BstNSI RCATGY 7 cut(s) 905, 1181, 1389, 1421, 1452, 1462, 3506
BstPI GGTNACC 1 cut(s) 1048
BstSCI CCNGG 2 cut(s) 69, 1576
BstSFI CTRYAG 2 cut(s) 1437, 2943
BstSLI GKGCMC 2 cut(s) 316, 1701
BstUI CGCG 1 cut(s) 2817
BstV1I GCAGC 8 cut(s) 61, 1369, 2447, 2808, 2855, 2941, 3297, 3381
BstV2I GAAGAC 2 cut(s) 519, 1631
BstX2I RGATCY 4 cut(s) 556, 649, 2582, 2999
BstYI RGATCY 4 cut(s) 556, 649, 2582, 2999
BstZ17I GTATAC 1 cut(s) 194
Bsu15I ATCGAT 3 cut(s) 2004, 2038, 3515
BsuRI GGCC 4 cut(s) 628, 1858, 2019, 2192
BsuTUI ATCGAT 3 cut(s) 2004, 2038, 3515
BtgI CCRYGG 3 cut(s) 1218, 1930, 2238
BtgZI GCGATG 1 cut(s) 2366
BtsCI GGATG 8 cut(s) 156, 733, 1099, 1191, 2248, 2477, 2572, 3100
BtsI GCAGTG 1 cut(s) 332
BtsIMutI CAGTG 7 cut(s) 332, 379, 503, 2559, 2616, 2670, 2952
BtuMI TCGCGA 1 cut(s) 2817
Cac8I GCNNGC 9 cut(s) 55, 79, 960, 1166, 1387, 1680, 2142, 2819, 3438
CaiI CAGNNNCTG 2 cut(s) 1838, 3433
CciI TCATGA 5 cut(s) 1132, 1401, 1726, 2713, 3078
CfoI GCGC 3 cut(s) 1030, 1477, 3025
Cfr10I RCCGGY 1 cut(s) 415
Cfr13I GGNCC 2 cut(s) 601, 626
ClaI ATCGAT 3 cut(s) 2004, 2038, 3515
CseI GACGC 2 cut(s) 719, 2345
Csp6I GTAC 5 cut(s) 1434, 2427, 2472, 2508, 3086
CspAI ACCGGT 1 cut(s) 415
CviQI GTAC 5 cut(s) 1434, 2427, 2472, 2508, 3086
DpnI GATC 8 cut(s) 530, 558, 651, 1725, 2003, 2584, 3001, 3462
DpnII GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
DraIII CACNNNGTG 1 cut(s) 509
DrdI GACNNNNNNGTC 1 cut(s) 1633
DriI GACNNNNNGTC 1 cut(s) 286
DseDI GACNNNNNNGTC 1 cut(s) 1633
Eam1105I GACNNNNNGTC 1 cut(s) 286
Ecl136II GAGCTC 2 cut(s) 1355, 2201
Eco130I CCWWGG 5 cut(s) 1218, 1882, 1930, 2238, 2629
Eco147I AGGCCT 2 cut(s) 2019, 2192
Eco24I GRGCYC 3 cut(s) 1357, 2203, 2616
Eco47I GGWCC 1 cut(s) 601
Eco47III AGCGCT 1 cut(s) 1029
Eco53kI GAGCTC 2 cut(s) 1355, 2201
Eco57I CTGAAG 4 cut(s) 555, 960, 1643, 2238
Eco91I GGTNACC 1 cut(s) 1048
EcoICRI GAGCTC 2 cut(s) 1355, 2201
EcoNI CCTNNNNNAGG 2 cut(s) 737, 1231
EcoO65I GGTNACC 1 cut(s) 1048
EcoRI GAATTC 4 cut(s) 659, 1291, 1321, 1373
EcoRII CCWGG 2 cut(s) 69, 1576
EcoT14I CCWWGG 5 cut(s) 1218, 1882, 1930, 2238, 2629
EcoT22I ATGCAT 2 cut(s) 2854, 3508
EcoT38I GRGCYC 3 cut(s) 1357, 2203, 2616
ErhI CCWWGG 5 cut(s) 1218, 1882, 1930, 2238, 2629
FalI AAGNNNNNCTT 6 cut(s) 2097, 2129, 2685, 2717, 3123, 3155
FauI CCCGC 1 cut(s) 70
FauNDI CATATG 3 cut(s) 1866, 3258, 3367
FblI GTMKAC 3 cut(s) 45, 193, 3499
Fnu4HI GCNGC 8 cut(s) 75, 1383, 2436, 2822, 2844, 2930, 3311, 3395
FokI GGATG 8 cut(s) 163, 740, 1106, 1178, 2255, 2464, 2579, 3107
FriOI GRGCYC 3 cut(s) 1357, 2203, 2616
Fsp4HI GCNGC 8 cut(s) 75, 1383, 2436, 2822, 2844, 2930, 3311, 3395
GlaI GCGC 3 cut(s) 1029, 1476, 3024
GluI GCNGC 8 cut(s) 75, 1383, 2436, 2822, 2844, 2930, 3311, 3395
GsuI CTGGAG 3 cut(s) 1295, 2034, 2415
HaeII RGCGCY 1 cut(s) 1031
HaeIII GGCC 4 cut(s) 628, 1858, 2019, 2192
HapII CCGG 1 cut(s) 416
HgaI GACGC 2 cut(s) 719, 2345
HhaI GCGC 3 cut(s) 1030, 1477, 3025
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 1028, 1475, 3023
HinP1I GCGC 3 cut(s) 1028, 1475, 3023
HincII GTYRAC 2 cut(s) 9, 46
HindII GTYRAC 2 cut(s) 9, 46
HindIII AAGCTT 6 cut(s) 79, 446, 1065, 2138, 2261, 3137
HpaII CCGG 1 cut(s) 416
HphI GGTGA 6 cut(s) 148, 521, 1042, 2789, 3226, 3386
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 7 cut(s) 717, 733, 1543, 1681, 1732, 2835, 3302
HpyCH4III ACNGT 7 cut(s) 364, 866, 2249, 2894, 2947, 3090, 3146
HpyCH4IV ACGT 4 cut(s) 42, 307, 931, 2510
HpySE526I ACGT 4 cut(s) 42, 307, 931, 2510
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 1028, 1475, 3023
Kzo9I GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
LmnI GCTCC 4 cut(s) 881, 1352, 2198, 3046
Lsp1109I GCAGC 8 cut(s) 61, 1369, 2447, 2808, 2855, 2941, 3297, 3381
MaeII ACGT 4 cut(s) 42, 307, 931, 2510
MaeIII GTNAC 6 cut(s) 38, 1048, 1139, 1567, 2731, 2777
MalI GATC 8 cut(s) 530, 558, 651, 1725, 2003, 2584, 3001, 3462
MboI GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
MflI RGATCY 4 cut(s) 556, 649, 2582, 2999
MhlI GDGCHC 6 cut(s) 187, 316, 1357, 1701, 2203, 2616
MlyI GAGTC 5 cut(s) 16, 1621, 1739, 2228, 2774
MmeI TCCRAC 2 cut(s) 2493, 3072
Mph1103I ATGCAT 2 cut(s) 2854, 3508
MroXI GAANNNNTTC 2 cut(s) 2319, 3120
MslI CAYNNNNRTG 2 cut(s) 1646, 2351
MspA1I CMGCKG 1 cut(s) 2932
MspI CCGG 1 cut(s) 416
MspR9I CCNGG 2 cut(s) 71, 1578
Mva1269I GAATGC 5 cut(s) 473, 755, 1979, 2962, 3214
MvaI CCWGG 2 cut(s) 71, 1578
MvnI CGCG 1 cut(s) 2817
NcoI CCATGG 3 cut(s) 1218, 1930, 2238
NdeI CATATG 3 cut(s) 1866, 3258, 3367
NdeII GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
NheI GCTAGC 1 cut(s) 1678
NlaIV GGNNCC 2 cut(s) 558, 627
NmuCI GTSAC 2 cut(s) 1048, 2777
NruI TCGCGA 1 cut(s) 2817
NsiI ATGCAT 2 cut(s) 2854, 3508
NspI RCATGY 7 cut(s) 905, 1181, 1389, 1421, 1452, 1462, 3506
NspV TTCGAA 1 cut(s) 1242
PaeI GCATGC 1 cut(s) 1389
PagI TCATGA 5 cut(s) 1132, 1401, 1726, 2713, 3078
PceI AGGCCT 2 cut(s) 2019, 2192
PciI ACATGT 1 cut(s) 1448
PctI GAATGC 5 cut(s) 473, 755, 1979, 2962, 3214
PdmI GAANNNNTTC 2 cut(s) 2319, 3120
PfeI GAWTC 9 cut(s) 270, 842, 2040, 2081, 2320, 2873, 2984, 3324, 3408
PflMI CCANNNNNTGG 2 cut(s) 989, 1888
PinAI ACCGGT 1 cut(s) 415
PkrI GCNGC 8 cut(s) 76, 1384, 2437, 2823, 2845, 2931, 3312, 3396
PleI GAGTC 5 cut(s) 16, 1621, 1738, 2228, 2774
PpsI GAGTC 5 cut(s) 16, 1621, 1738, 2228, 2774
Ppu21I YACGTR 1 cut(s) 308
PscI ACATGT 1 cut(s) 1448
PshBI ATTAAT 2 cut(s) 3047, 3221
PsiI TTATAA 1 cut(s) 2180
Psp124BI GAGCTC 2 cut(s) 1357, 2203
Psp6I CCWGG 2 cut(s) 69, 1576
PspEI GGTNACC 1 cut(s) 1048
PspGI CCWGG 2 cut(s) 69, 1576
PspN4I GGNNCC 2 cut(s) 558, 627
PspPI GGNCC 2 cut(s) 601, 626
PstI CTGCAG 1 cut(s) 1441
PstNI CAGNNNCTG 2 cut(s) 1838, 3433
PsuI RGATCY 4 cut(s) 556, 649, 2582, 2999
RruI TCGCGA 1 cut(s) 2817
RsaI GTAC 5 cut(s) 1435, 2428, 2473, 2509, 3087
RsaNI GTAC 5 cut(s) 1434, 2427, 2472, 2508, 3086
RseI CAYNNNNRTG 2 cut(s) 1646, 2351
SacI GAGCTC 2 cut(s) 1357, 2203
SalI GTCGAC 1 cut(s) 44
SatI GCNGC 8 cut(s) 75, 1383, 2436, 2822, 2844, 2930, 3311, 3395
Sau3AI GATC 8 cut(s) 528, 556, 649, 1723, 2001, 2582, 2999, 3460
Sau96I GGNCC 2 cut(s) 601, 626
ScaI AGTACT 1 cut(s) 3087
SchI GAGTC 5 cut(s) 16, 1621, 1739, 2228, 2774
ScrFI CCNGG 2 cut(s) 71, 1578
SduI GDGCHC 6 cut(s) 187, 316, 1357, 1701, 2203, 2616
SfcI CTRYAG 2 cut(s) 1437, 2943
SfuI TTCGAA 1 cut(s) 1242
SinI GGWCC 1 cut(s) 601
SmiMI CAYNNNNRTG 2 cut(s) 1646, 2351
SmlI CTYRAG 5 cut(s) 32, 803, 1791, 2021, 3058
SmoI CTYRAG 5 cut(s) 32, 803, 1791, 2021, 3058
SphI GCATGC 1 cut(s) 1389
SseBI AGGCCT 2 cut(s) 2019, 2192
SsiI CCGC 4 cut(s) 63, 2409, 2932, 3186
SspI AATATT 5 cut(s) 573, 609, 1150, 2391, 3444
SstI GAGCTC 2 cut(s) 1357, 2203
StuI AGGCCT 2 cut(s) 2019, 2192
StyD4I CCNGG 2 cut(s) 69, 1576
StyI CCWWGG 5 cut(s) 1218, 1882, 1930, 2238, 2629
TaaI ACNGT 7 cut(s) 364, 866, 2249, 2894, 2947, 3090, 3146
TaiI ACGT 4 cut(s) 45, 310, 934, 2513
TaqI TCGA 8 cut(s) 45, 737, 1242, 2004, 2038, 2639, 3271, 3515
TatI WGTACW 2 cut(s) 2426, 3085
TfiI GAWTC 9 cut(s) 270, 842, 2040, 2081, 2320, 2873, 2984, 3324, 3408
TscAI CASTG 7 cut(s) 339, 379, 510, 2566, 2623, 2677, 2952
TseFI GTSAC 2 cut(s) 1048, 2777
TseI GCWGC 8 cut(s) 74, 1382, 2435, 2821, 2843, 2929, 3310, 3394
Tsp45I GTSAC 2 cut(s) 1048, 2777
TspGWI ACGGA 2 cut(s) 182, 783
TspRI CASTG 7 cut(s) 339, 379, 510, 2566, 2623, 2677, 2952
Van91I CCANNNNNTGG 2 cut(s) 989, 1888
VneI GTGCAC 2 cut(s) 312, 1697
VpaK11BI GGWCC 1 cut(s) 601
VspI ATTAAT 2 cut(s) 3047, 3221
XagI CCTNNNNNAGG 2 cut(s) 737, 1231
XapI RAATTY 8 cut(s) 85, 659, 1078, 1291, 1321, 1373, 1920, 2465
XbaI TCTAGA 2 cut(s) 872, 2996
XceI RCATGY 7 cut(s) 905, 1181, 1389, 1421, 1452, 1462, 3506
XcmI CCANNNNNNNNNTGG 3 cut(s) 1216, 2192, 2669
XmiI GTMKAC 3 cut(s) 45, 193, 3499
XmnI GAANNNNTTC 2 cut(s) 2319, 3120
ZrmI AGTACT 1 cut(s) 3087
Zsp2I ATGCAT 2 cut(s) 2854, 3508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.