Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0012864

Physical Location & Seq

Genomic Coordinates Forward (+)

7980930 .. 7982372

Gene Structure 1443 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGAGAAACGAAAGAGGAGGAGGCACCATGGTAGCAGAACGCAATGTCCCCCACCACCACAGGCCGAAATTCGGAGCCCTTTTGCATTCCTCCGACCCATCCTTGACGTCTCCGACAAGCACCAACGAGACCAACAATAACGACAGCAGCCACCAGAATGATTACTCAACACGGCGTAGCAGTGCCTCGGCGACAAGTCCTCGGTACTACGGCAATAGTACCCAAGGCGGCAGCAGCACCGAGGGTTCACCCTATGTCATGTCCCCATGGAACCCAGCGACGGCGTCACCCTACAATAAGTCCCCGTGGATAACGCCGTCGTCGTTGAATCCGCTGGACGAGAATTTCCCTTTAAACGGACTCATTGGATCATTAGTCCGGGAAGAAGGCCACATATACTCGCTGGCTGTCAAAGGAGACTTGCTGTATACCGGGTCGGATAGCAGGAACATTCGTGTCTGGAAGAACTTGAAGGATTTTACGGGTTTCAAATCGAAGAGCGGGTTGATCAAAGCCATCGTGATTTCCGGCGAGAGGATATTCACCGGTCATCAGGATGGTAAGATCCGAGTCTGGAAGTTTTCCGAGAAAAATCCAAGCAATTACAGACGGGTTGGGAGCTTGCCAACTATGAAAGATTTTATTCGGAGTTCCATGAAGCCGAAAAACTACGTGGAGGTCCGGAGACACCGCAGCGTTGTTCGAATCAGACACTTCGATGCGGTGTCTTGCTTGAGCATGAACGAAGAACAAGGGCTTCTTTATTCAGGGTCGTGGGATAAGTCTTTCAAGGTTTGGAGAATTGCCGATTCCAAATGCTTGGAGTCGGTCGCAGCTCACGAGGACGCAGTAAACAGTGTTGTCGTGGGTTTCGAGTCATTGGTGTTCACCGGCTCGGCGGACGGGACTGTGAAGGTGTGGAGGAGGGAGTTGCAAGGGAAGGGAACTTCGCATGTGTTGGTTCAGACGTTGTTGAAGCAAGAGAACGCGGTGACGGCATTGGCAGTGAACAAGGAGGCCGCGATTGTCTATTGTGGGTCATCCGATGGGTTGGTCAATTATTGGGATCGCGCGAAGCACTTGTCCCATGGCGGAGTTTTGCGCGGCCATAAACTTGCCGTGCTGTGCTTGTCCTCAGCGGGAAACTTGGTTTTCAGCGGATCAGCGGACAAGAATATTTGCATATGGAGGAGGGAAGAAGGTGGGGCGCACACCTGCTTGTCTGTCTTGACAGGCCACACAGGACCCGTCAAATGCTTAACCGTGGTGGAAGATCACGGCTCCGAGAACAAGGCAGGTCAGGGTTGGGTGTTATACAGTGGCAGCCTTGACCGGTCCGTAAAGGTATGGCGCGTGTCCGAGGACGCTCCGGACTTGAGGCAAATACGGGCGTTGGTGAAGGACGCTTCAATAAGGCAGGAAGCCGCTCGGCTCCACTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007049 GO:0008092 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016905 GO:0017022 GO:0017076 GO:0018107 GO:0018193 GO:0018210 GO:0019538 GO:0022402 GO:0022411 GO:0030029 GO:0030036 GO:0030554 GO:0030863 GO:0030864 GO:0031033 GO:0031035 GO:0031037 GO:0031038 GO:0032153 GO:0032155 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045159 GO:0046777 GO:0051301 GO:0061640 GO:0070938 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0099568 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

481

Amino Acids

52.9

Weight (kDa)

9.43

Isoelectric Point (pI)

43.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_SCAP	PF24017	26 - 361	6e-17	SCAP Beta-propeller
WD40_CDC20-Fz	PF24807	176 - 308	4.1e-06	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	233 - 308	1.4e-10	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	233 - 396	1.6e-11	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	236 - 310	2.3e-07	WDHD1 first WD40 domain
Beta-prop_TEP1_2nd	PF25047	237 - 310	6.1e-07	TEP-1 second beta-propeller
WDR55	PF24796	237 - 425	7.9e-15	WDR55
Beta-prop_WDR5	PF25175	237 - 309	9.4e-13	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	238 - 360	3.3e-11	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	238 - 377	4.4e-11	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	241 - 358	2e-14	Prp19 WD40 domain
Beta-prop_WDR3_2nd	PF25172	242 - 359	4.2e-12	WDR3 second beta-propeller domain
NBCH_WD40	PF20426	243 - 349	1.8e-10	Neurobeachin beta propeller domain
Beta-prop_EML_2	PF23414	244 - 402	1.4e-10	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	294 - 454	1.7e-18	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	320 - 454	5.6e-18	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	323 - 458	4.6e-10	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	332 - 459	8.1e-10	TEP-1 second beta-propeller
WD40	PF00400	365 - 396	7.4e-06	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	367 - 451	5.6e-07	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	375 - 455	1e-06	THOC3 beta-propeller domain
WD40_Prp19	PF24814	375 - 456	4.1e-08	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49450 AT3G18950
fragaria_vesca	FvH4_2g07401
malus_domestica	MD00G1129400.v1.1 MD10G1086000.v1.1
prunus_persica	Prupe.8G110400_v2.0.a1
pyrus_communis	pycom10g06780
rosa_chinensis	RchiOBHm_Chr6g0260861
rosa_laevigata	RLG00000014479
rosa_multiflora	Rmu_sc0000588.1_g000049 Rmu_sc0005980.1_g000006
rosa_roxburghii	Rroxscaffold_7G00207480
rosa_samantha	Rh6AG112700 Rh6BG106500 Rh6CG103800 Rh6DG094700
rosa_wichuraiana	Rw6G009560 Rw6G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1223
AatII	GACGTC	1 cut(s)	110
Acc36I	ACCTGC	2 cut(s)	1223, 1286
AccB1I	GGYRCC	1 cut(s)	23
AccBSI	CCGCTC	2 cut(s)	501, 1427
AccI	GTMKAC	1 cut(s)	428
AccII	CGCG	6 cut(s)	989, 1022, 1071, 1073, 1104, 1353
AccIII	TCCGGA	2 cut(s)	681, 1369
AclWI	GGATC	4 cut(s)	376, 559, 1074, 1168
AcoI	YGGCCR	1 cut(s)	1105
AcsI	RAATTY	2 cut(s)	68, 343
AcyI	GRCGYC	2 cut(s)	107, 284
AfaI	GTAC	2 cut(s)	206, 220
AfiI	CCNNNNNNNGG	4 cut(s)	71, 280, 356, 534
AgeI	ACCGGT	2 cut(s)	545, 1332
AgsI	TTSAA	6 cut(s)	328, 472, 490, 790, 976, 1410
AloI	GAACNNNNNNTCC	2 cut(s)	30, 62
AluBI	AGCT	2 cut(s)	621, 836
AluI	AGCT	2 cut(s)	621, 836
Alw26I	GTCTC	4 cut(s)	114, 122, 411, 679
AlwI	GGATC	4 cut(s)	376, 559, 1074, 1168
Aor13HI	TCCGGA	2 cut(s)	681, 1369
AoxI	GGCC	5 cut(s)	62, 388, 1017, 1105, 1234
ApeKI	GCWGC	6 cut(s)	147, 231, 234, 693, 833, 1323
ApoI	RAATTY	2 cut(s)	68, 343
ArsI	GACNNNNNNTTYG	2 cut(s)	1067, 1099
AsiGI	ACCGGT	2 cut(s)	545, 1332
AspLEI	GCGC	4 cut(s)	1073, 1104, 1210, 1353
AspS9I	GGNCC	3 cut(s)	679, 1244, 1335
AsuC2I	CCSGG	2 cut(s)	380, 433
AsuHPI	GGTGA	6 cut(s)	240, 279, 535, 880, 1003, 1408
AsuII	TTCGAA	1 cut(s)	703
AvaII	GGWCC	3 cut(s)	679, 1244, 1335
BanI	GGYRCC	1 cut(s)	23
BanII	GRGCYC	1 cut(s)	79
BauI	CACGAG	1 cut(s)	839
BbvCI	CCTCAGC	1 cut(s)	1135
BbvI	GCAGC	6 cut(s)	159, 243, 246, 705, 845, 1335
BccI	CCATC	4 cut(s)	106, 524, 551, 1040
BceAI	ACGGC	7 cut(s)	188, 226, 297, 301, 1011, 1103, 1294
BclI	TGATCA	1 cut(s)	507
BcnI	CCSGG	2 cut(s)	380, 433
BcoDI	GTCTC	4 cut(s)	114, 122, 411, 679
BfuAI	ACCTGC	2 cut(s)	1223, 1286
Bme1390I	CCNGG	2 cut(s)	380, 433
Bme18I	GGWCC	3 cut(s)	679, 1244, 1335
BmgT120I	GGNCC	3 cut(s)	679, 1244, 1335
BmiI	GGNNCC	6 cut(s)	25, 76, 272, 1246, 1282, 1433
BmrFI	CCNGG	2 cut(s)	380, 433
BmsI	GCATC	1 cut(s)	709
Bpu10I	CCTNAGC	1 cut(s)	1135
Bpu14I	TTCGAA	1 cut(s)	703
BpuEI	CTTGAG	2 cut(s)	754, 1396
BpuMI	CCSGG	2 cut(s)	380, 433
BsaAI	YACGTR	1 cut(s)	673
BsaHI	GRCGYC	2 cut(s)	107, 284
BsaI	GGTCTC	1 cut(s)	122
BsaWI	WCCGGW	4 cut(s)	545, 681, 1332, 1369
Bsc4I	CCNNNNNNNGG	4 cut(s)	71, 280, 356, 534
Bse118I	RCCGGY	3 cut(s)	545, 890, 1332
Bse3DI	GCAATG	1 cut(s)	49
BseAI	TCCGGA	2 cut(s)	681, 1369
BseGI	GGATG	3 cut(s)	98, 562, 1040
BseLI	CCNNNNNNNGG	4 cut(s)	71, 280, 356, 534
BseMI	GCAATG	1 cut(s)	49
BseMII	CTCAG	1 cut(s)	1149
BseRI	GAGGAG	4 cut(s)	30, 33, 937, 1204
BseXI	GCAGC	6 cut(s)	159, 243, 246, 705, 845, 1335
BseYI	CCCAGC	1 cut(s)	274
Bsh1236I	CGCG	6 cut(s)	989, 1022, 1071, 1073, 1104, 1353
Bsh1285I	CGRYCG	1 cut(s)	831
BshFI	GGCC	5 cut(s)	64, 390, 1019, 1107, 1236
BshNI	GGYRCC	1 cut(s)	23
BshTI	ACCGGT	2 cut(s)	545, 1332
BsiEI	CGRYCG	1 cut(s)	831
BsiSI	CCGG	8 cut(s)	379, 432, 528, 546, 682, 891, 1333, 1370
BslFI	GGGAC	5 cut(s)	32, 247, 286, 919, 1069
BslI	CCNNNNNNNGG	4 cut(s)	71, 280, 356, 534
BsmAI	GTCTC	4 cut(s)	114, 122, 411, 679
BsmBI	CGTCTC	1 cut(s)	114
BsmFI	GGGAC	5 cut(s)	32, 247, 286, 919, 1069
BsmI	GAATGC	1 cut(s)	85
BsnI	GGCC	5 cut(s)	64, 390, 1019, 1107, 1236
Bso31I	GGTCTC	1 cut(s)	122
Bsp119I	TTCGAA	1 cut(s)	703
Bsp1286I	GDGCHC	1 cut(s)	79
Bsp13I	TCCGGA	2 cut(s)	681, 1369
Bsp143I	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
Bsp19I	CCATGG	3 cut(s)	27, 266, 1087
BspANI	GGCC	5 cut(s)	64, 390, 1019, 1107, 1236
BspCNI	CTCAG	1 cut(s)	1148
BspEI	TCCGGA	2 cut(s)	681, 1369
BspFNI	CGCG	6 cut(s)	989, 1022, 1071, 1073, 1104, 1353
BspLI	GGNNCC	6 cut(s)	25, 76, 272, 1246, 1282, 1433
BspMI	ACCTGC	2 cut(s)	1223, 1286
BspPI	GGATC	4 cut(s)	376, 559, 1074, 1168
BspQI	GCTCTTC	1 cut(s)	491
BspT104I	TTCGAA	1 cut(s)	703
BspT107I	GGYRCC	1 cut(s)	23
BspTNI	GGTCTC	1 cut(s)	122
BsrBI	CCGCTC	2 cut(s)	501, 1427
BsrDI	GCAATG	1 cut(s)	49
BsrFI	RCCGGY	3 cut(s)	545, 890, 1332
BssAI	RCCGGY	3 cut(s)	545, 890, 1332
BssMI	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
BssNAI	GTATAC	1 cut(s)	429
BssNI	GRCGYC	2 cut(s)	107, 284
BssSI	CACGAG	1 cut(s)	839
BssT1I	CCWWGG	4 cut(s)	27, 223, 266, 1087
Bst1107I	GTATAC	1 cut(s)	429
Bst2BI	CACGAG	1 cut(s)	839
Bst4CI	ACNGT	4 cut(s)	857, 910, 1264, 1319
Bst6I	CTCTTC	1 cut(s)	491
BstACI	GRCGYC	2 cut(s)	107, 284
BstBAI	YACGTR	1 cut(s)	673
BstBI	TTCGAA	1 cut(s)	703
BstC8I	GCNNGC	2 cut(s)	405, 623
BstDEI	CTNAG	1 cut(s)	1135
BstDSI	CCRYGG	5 cut(s)	27, 266, 305, 1087, 1263
BstF5I	GGATG	3 cut(s)	98, 562, 1040
BstFNI	CGCG	6 cut(s)	989, 1022, 1071, 1073, 1104, 1353
BstHHI	GCGC	4 cut(s)	1073, 1104, 1210, 1353
BstKTI	GATC	6 cut(s)	371, 510, 567, 1069, 1163, 1276
BstMAI	GTCTC	4 cut(s)	114, 122, 411, 679
BstMBI	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
BstMCI	CGRYCG	1 cut(s)	831
BstMWI	GCNNNNNNNGC	2 cut(s)	234, 995
BstNSI	RCATGY	1 cut(s)	956
BstSCI	CCNGG	2 cut(s)	378, 431
BstUI	CGCG	6 cut(s)	989, 1022, 1071, 1073, 1104, 1353
BstV1I	GCAGC	6 cut(s)	159, 243, 246, 705, 845, 1335
BstX2I	RGATCY	1 cut(s)	564
BstXI	CCANNNNNNTGG	1 cut(s)	820
BstYI	RGATCY	1 cut(s)	564
BstZ17I	GTATAC	1 cut(s)	429
BsuRI	GGCC	5 cut(s)	64, 390, 1019, 1107, 1236
BtgI	CCRYGG	5 cut(s)	27, 266, 305, 1087, 1263
BtsCI	GGATG	3 cut(s)	98, 562, 1040
BtsI	GCAGTG	2 cut(s)	187, 1011
BtsIMutI	CAGTG	4 cut(s)	187, 862, 1011, 1324
BveI	ACCTGC	2 cut(s)	1223, 1286
Cac8I	GCNNGC	2 cut(s)	405, 623
CfoI	GCGC	4 cut(s)	1073, 1104, 1210, 1353
Cfr10I	RCCGGY	3 cut(s)	545, 890, 1332
Cfr13I	GGNCC	3 cut(s)	679, 1244, 1335
CpoI	CGGWCCG	1 cut(s)	1335
CseI	GACGC	4 cut(s)	273, 854, 1373, 1412
Csp6I	GTAC	2 cut(s)	205, 219
CspAI	ACCGGT	2 cut(s)	545, 1332
CspI	CGGWCCG	1 cut(s)	1335
CviAII	CATG	7 cut(s)	28, 259, 267, 655, 739, 953, 1088
CviQI	GTAC	2 cut(s)	205, 219
DdeI	CTNAG	1 cut(s)	1135
DpnI	GATC	6 cut(s)	370, 509, 566, 1068, 1162, 1275
DpnII	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
DraI	TTTAAA	1 cut(s)	354
EaeI	YGGCCR	1 cut(s)	1105
Eam1104I	CTCTTC	1 cut(s)	491
EarI	CTCTTC	1 cut(s)	491
EciI	GGCGGA	2 cut(s)	914, 1107
Eco130I	CCWWGG	4 cut(s)	27, 223, 266, 1087
Eco24I	GRGCYC	1 cut(s)	79
Eco31I	GGTCTC	1 cut(s)	122
Eco47I	GGWCC	3 cut(s)	679, 1244, 1335
EcoO109I	RGGNCCY	1 cut(s)	1244
EcoT14I	CCWWGG	4 cut(s)	27, 223, 266, 1087
EcoT38I	GRGCYC	1 cut(s)	79
ErhI	CCWWGG	4 cut(s)	27, 223, 266, 1087
Esp3I	CGTCTC	1 cut(s)	114
FaeI	CATG	7 cut(s)	31, 262, 270, 658, 742, 956, 1091
FalI	AAGNNNNNCTT	2 cut(s)	744, 776
FaqI	GGGAC	5 cut(s)	32, 247, 286, 919, 1069
FatI	CATG	7 cut(s)	27, 258, 266, 654, 738, 952, 1087
FauI	CCCGC	2 cut(s)	494, 1132
FauNDI	CATATG	1 cut(s)	1184
FbaI	TGATCA	1 cut(s)	507
FblI	GTMKAC	1 cut(s)	428
FokI	GGATG	3 cut(s)	85, 569, 1027
FriOI	GRGCYC	1 cut(s)	79
GlaI	GCGC	4 cut(s)	1072, 1103, 1209, 1352
GsaI	CCCAGC	1 cut(s)	278
HaeIII	GGCC	5 cut(s)	64, 390, 1019, 1107, 1236
HapII	CCGG	8 cut(s)	379, 432, 528, 546, 682, 891, 1333, 1370
HgaI	GACGC	4 cut(s)	273, 854, 1373, 1412
HhaI	GCGC	4 cut(s)	1073, 1104, 1210, 1353
Hin1I	GRCGYC	2 cut(s)	107, 284
Hin1II	CATG	7 cut(s)	31, 262, 270, 658, 742, 956, 1091
Hin6I	GCGC	4 cut(s)	1071, 1102, 1208, 1351
HinP1I	GCGC	4 cut(s)	1071, 1102, 1208, 1351
HinfI	GANTC	7 cut(s)	328, 360, 570, 705, 809, 824, 875
HpaII	CCGG	8 cut(s)	379, 432, 528, 546, 682, 891, 1333, 1370
HphI	GGTGA	6 cut(s)	240, 279, 535, 880, 1003, 1408
Hpy166II	GTNNAC	5 cut(s)	248, 429, 853, 888, 1009
Hpy188III	TCNNGA	8 cut(s)	460, 520, 554, 574, 682, 839, 1228, 1370
Hpy8I	GTNNAC	5 cut(s)	248, 429, 853, 888, 1009
Hpy99I	CGWCG	3 cut(s)	283, 322, 325
HpyAV	CCTTC	6 cut(s)	380, 466, 907, 934, 1193, 1393
HpyCH4III	ACNGT	4 cut(s)	857, 910, 1264, 1319
HpyCH4IV	ACGT	3 cut(s)	107, 672, 968
HpyCH4V	TGCA	3 cut(s)	85, 934, 1182
HpyF10VI	GCNNNNNNNGC	2 cut(s)	234, 995
HpyF3I	CTNAG	1 cut(s)	1135
HpySE526I	ACGT	3 cut(s)	107, 672, 968
Hsp92I	GRCGYC	2 cut(s)	107, 284
Hsp92II	CATG	7 cut(s)	31, 262, 270, 658, 742, 956, 1091
HspAI	GCGC	4 cut(s)	1071, 1102, 1208, 1351
Kpn2I	TCCGGA	2 cut(s)	681, 1369
Ksp22I	TGATCA	1 cut(s)	507
Kzo9I	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
LguI	GCTCTTC	1 cut(s)	491
LmnI	GCTCC	5 cut(s)	74, 618, 1286, 1372, 1437
Lsp1109I	GCAGC	6 cut(s)	159, 243, 246, 705, 845, 1335
LweI	GCATC	1 cut(s)	709
MaeII	ACGT	3 cut(s)	107, 672, 968
MaeIII	GTNAC	2 cut(s)	285, 991
MalI	GATC	6 cut(s)	370, 509, 566, 1068, 1162, 1275
MbiI	CCGCTC	2 cut(s)	501, 1427
MboI	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
MboII	GAAGA	6 cut(s)	395, 475, 508, 758, 1208, 1283
MflI	RGATCY	1 cut(s)	564
MhlI	GDGCHC	1 cut(s)	79
MluCI	AATT	5 cut(s)	68, 343, 601, 801, 1057
MlyI	GAGTC	4 cut(s)	354, 579, 833, 884
MmeI	TCCRAC	3 cut(s)	117, 137, 417
MroI	TCCGGA	2 cut(s)	681, 1369
MseI	TTAA	2 cut(s)	353, 1259
MslI	CAYNNNNRTG	3 cut(s)	156, 555, 717
MspA1I	CMGCKG	4 cut(s)	334, 1139, 1158, 1166
MspI	CCGG	8 cut(s)	379, 432, 528, 546, 682, 891, 1333, 1370
MspR9I	CCNGG	2 cut(s)	380, 433
Mva1269I	GAATGC	1 cut(s)	85
MvnI	CGCG	6 cut(s)	989, 1022, 1071, 1073, 1104, 1353
MwoI	GCNNNNNNNGC	2 cut(s)	234, 995
NciI	CCSGG	2 cut(s)	380, 433
NcoI	CCATGG	3 cut(s)	27, 266, 1087
NdeI	CATATG	1 cut(s)	1184
NdeII	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
NlaIII	CATG	7 cut(s)	31, 262, 270, 658, 742, 956, 1091
NlaIV	GGNNCC	6 cut(s)	25, 76, 272, 1246, 1282, 1433
NmeAIII	GCCGAG	3 cut(s)	167, 875, 1408
NmuCI	GTSAC	2 cut(s)	285, 991
NspI	RCATGY	1 cut(s)	956
NspV	TTCGAA	1 cut(s)	703
PaqCI	CACCTGC	1 cut(s)	1223
PciSI	GCTCTTC	1 cut(s)	491
PcsI	WCGNNNNNNNCGW	3 cut(s)	320, 837, 870
PctI	GAATGC	1 cut(s)	85
PfeI	GAWTC	3 cut(s)	328, 705, 809
PflFI	GACNNNGTC	1 cut(s)	283
PfoI	TCCNGGA	1 cut(s)	378
PinAI	ACCGGT	2 cut(s)	545, 1332
PleI	GAGTC	4 cut(s)	354, 578, 832, 883
PpsI	GAGTC	4 cut(s)	354, 578, 832, 883
Ppu21I	YACGTR	1 cut(s)	673
PpuMI	RGGWCCY	1 cut(s)	1244
Psp5II	RGGWCCY	1 cut(s)	1244
PspFI	CCCAGC	1 cut(s)	274
PspN4I	GGNNCC	6 cut(s)	25, 76, 272, 1246, 1282, 1433
PspPI	GGNCC	3 cut(s)	679, 1244, 1335
PspPPI	RGGWCCY	1 cut(s)	1244
PsuI	RGATCY	1 cut(s)	564
PsyI	GACNNNGTC	1 cut(s)	283
RsaI	GTAC	2 cut(s)	206, 220
RsaNI	GTAC	2 cut(s)	205, 219
RseI	CAYNNNNRTG	3 cut(s)	156, 555, 717
Rsr2I	CGGWCCG	1 cut(s)	1335
RsrII	CGGWCCG	1 cut(s)	1335
SapI	GCTCTTC	1 cut(s)	491
SaqAI	TTAA	2 cut(s)	353, 1259
Sau3AI	GATC	6 cut(s)	368, 507, 564, 1066, 1160, 1273
Sau96I	GGNCC	3 cut(s)	679, 1244, 1335
SchI	GAGTC	4 cut(s)	354, 579, 833, 884
ScrFI	CCNGG	2 cut(s)	380, 433
SduI	GDGCHC	1 cut(s)	79
SfaNI	GCATC	1 cut(s)	709
SfuI	TTCGAA	1 cut(s)	703
SinI	GGWCC	3 cut(s)	679, 1244, 1335
SmiMI	CAYNNNNRTG	3 cut(s)	156, 555, 717
SmlI	CTYRAG	2 cut(s)	733, 1375
SmoI	CTYRAG	2 cut(s)	733, 1375
Sse9I	AATT	5 cut(s)	68, 343, 601, 801, 1057
SspI	AATATT	1 cut(s)	1177
StyD4I	CCNGG	2 cut(s)	378, 431
StyI	CCWWGG	4 cut(s)	27, 223, 266, 1087
TaaI	ACNGT	4 cut(s)	857, 910, 1264, 1319
TaiI	ACGT	3 cut(s)	110, 675, 971
TaqI	TCGA	4 cut(s)	494, 703, 717, 873
TaqII	GACCGA	1 cut(s)	817
TasI	AATT	5 cut(s)	68, 343, 601, 801, 1057
TauI	GCSGC	4 cut(s)	231, 1022, 1107, 1427
TfiI	GAWTC	3 cut(s)	328, 705, 809
Tru1I	TTAA	2 cut(s)	353, 1259
Tru9I	TTAA	2 cut(s)	353, 1259
TscAI	CASTG	4 cut(s)	187, 862, 1011, 1324
TseFI	GTSAC	2 cut(s)	285, 991
TseI	GCWGC	6 cut(s)	147, 231, 234, 693, 833, 1323
Tsp45I	GTSAC	2 cut(s)	285, 991
TspDTI	ATGAA	3 cut(s)	647, 671, 755
TspGWI	ACGGA	2 cut(s)	372, 1327
TspRI	CASTG	4 cut(s)	187, 862, 1011, 1324
Tth111I	GACNNNGTC	1 cut(s)	283
VpaK11BI	GGWCC	3 cut(s)	679, 1244, 1335
XapI	RAATTY	2 cut(s)	68, 343
XceI	RCATGY	1 cut(s)	956
XmiI	GTMKAC	1 cut(s)	428
ZraI	GACGTC	1 cut(s)	108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.