Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0012864

Physical Location & Seq

Genomic Coordinates Reverse (-)

57350601 .. 57352321

Gene Structure 1721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00207480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGAGAAAGGAAGGAGGTGGAACTATGGTGGCGGAACGTACCACGTTCCACAGACCAAAATTCGGAGCCCTATTGCAGTCCGATCCAAACATACCATCCCCAAATACACACAACAAAAGCGACAAAGAACACAGCATACGTAGCTCAGCCGTGAGCCCCGGTTACTACGACAACAACAGCAACGTGCGCAGTTCAGCCACGAGCCCCGGTTATTACGACAACAACCCCTTCAGCTCCTCCGCCAGTCCCGGGTACTACGACAACGCAAGTGCGATGTCCGGGAGCCCGGCCACAACTCTCGGGTTCTACGACAACAACAACGTGCAGGGCAGCAGCGTCGGTTCAACTCCATACGCCATGTCGCCGTGGAACCATGAATCGCCTTACAACAAGTCGCCGTGGATAGCGCCATCGCCGTTAAACCCGTTGTTGGACGAGAGGTGCTTGCCTGAGAGCGGGCTTGTTGGGTCGTTGGTACGGGAACAAGGGCATATATATTCGCTAGCGGTGAGCGGAGACTTGTTGTATACCGGGTCGGATAGTAAGAACATCCGGGTCTGGAAGAACTTGAAGGACTTCACTGGGTTCAAATCCAACAGCGGGTTGGTGAAAACCATTGTGATTTGCGGAGAGAAGATATTCACGGGTCACCAAGATGGAAAAATCAGGGTATGGAAAGTTTCTCAGAAAAAGCCGAGCCTTCACAAACGGATCGGGTCATTGCCGGCGTTGAAAGATTTCATCCGGAGCTCTATGAACCCGAAGAATTACGTGGAGGTCAGACGCCACCGTAACGTGGTGAGGATCAGACACTTTGACGCAGTCTCGTGTATGAGCTTGAACGAAGAACTAGGGCTCTTATATTCCGGTTCATGGGACAAGACGTTCAAGGTTTGGAGAATTGCCGATTCCAAGTGTTTGGAATCTGTATCGGCTCACGATGACGCCGTGAACTCTGTGGTCGTTGGTTTTGATTCGATGGTGTTCACCGGCTCGGCGGACGGGACTGTAAAAGTGTGGAGGAGAGAGCTACAAGGAAAAGGCTCGACGCATTTCTTGGTGCAGACATTGCTGAAGCAAGAGAACGCGGTGACGGCATTGGCGGTGAACCAATCGGCGGCGATCGTTTACTGCGGCTCGTCCGACGGGAACGTCAACTACTGGGAACGTGAGAAGCATCTTTCGCACGGTGGAGTCCTCCGCGGCCACAGGCTGGCCGTGCTCTGCCTTGCCGCAGCCGGGAACTTGGTGTTCAGCGGCTCGGCGGACAAGAACATTTGCGTGTGGAGAAGAGAGGTTGGCCCGGGAGGGTCCCACTCGTGCCTATCGGTCTTGACGGGCCATTTAGGTCCCGTCAAGTGCCTGACCGTAGAGGAAGACCGCAGCCGCGCCGAGGACAAAACCGATCAGAAATGGATTGTGTACAGTGGGAGCTTGGATAGGTCGGTGAAGGTGTGGCGGGTTTCGGAGCAACCGCCGGACTTGAAGCGGATAGTGTTGTCGGAGAAGCAAGCTTCTTCAAGGAGGGTGGAGAACACGCGCTGTCGCGAAGATGATGTCTCTGTCTGTCCGGTGGTCCCTTTAATAACGCGCCAAAGAGCTTCAGACGAAGGTGCAGGGCACCGACCGGAGCAGCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007049 GO:0008092 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016905 GO:0017022 GO:0017076 GO:0018107 GO:0018193 GO:0018210 GO:0019538 GO:0022402 GO:0022411 GO:0030029 GO:0030036 GO:0030554 GO:0030863 GO:0030864 GO:0031033 GO:0031035 GO:0031037 GO:0031038 GO:0032153 GO:0032155 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045159 GO:0046777 GO:0051301 GO:0061640 GO:0070938 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0099568 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

546

Amino Acids

60.13

Weight (kDa)

9.18

Isoelectric Point (pI)

54.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_SCAP	PF24017	162 - 391	1.6e-12	SCAP Beta-propeller
WD40_Gbeta	PF25391	266 - 429	1.5e-10	G protein beta WD-40 repeat protein
Beta-prop_WDR3_1st	PF25173	267 - 341	8.3e-10	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	268 - 343	3.3e-07	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	270 - 342	9.7e-13	WDR5 beta-propeller domain
WDR55	PF24796	270 - 340	4.4e-06	WDR55
Beta-prop_TEP1_2nd	PF25047	271 - 349	6e-06	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	273 - 392	6.4e-10	THOC3 beta-propeller domain
WD40_Prp19	PF24814	274 - 391	4.1e-13	Prp19 WD40 domain
Beta-prop_WDR3_2nd	PF25172	275 - 391	2.3e-12	WDR3 second beta-propeller domain
NBCH_WD40	PF20426	277 - 341	8.5e-09	Neurobeachin beta propeller domain
Beta-prop_EML_2	PF23414	284 - 431	1.2e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40	PF00400	305 - 340	3.9e-06	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	353 - 491	2.8e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	353 - 491	3.8e-16	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	357 - 494	2.3e-08	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	361 - 458	3.9e-08	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	366 - 499	1.9e-10	TEP-1 second beta-propeller
WD40_Prp19	PF24814	408 - 491	1.5e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49450 AT3G18950
fragaria_vesca	FvH4_2g07401
malus_domestica	MD00G1129400.v1.1 MD10G1086000.v1.1
prunus_persica	Prupe.8G110400_v2.0.a1
pyrus_communis	pycom10g06780
rosa_chinensis	RchiOBHm_Chr6g0260861
rosa_laevigata	RLG00000014479
rosa_multiflora	Rmu_sc0000588.1_g000049 Rmu_sc0005980.1_g000006
rosa_roxburghii	Rroxscaffold_7G00207480
rosa_samantha	Rh6AG112700 Rh6BG106500 Rh6CG103800 Rh6DG094700
rosa_wichuraiana	Rw6G009560 Rw6G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1151
Acc16I	TGCGCA	1 cut(s)	188
AccB1I	GGYRCC	1 cut(s)	1620
AccB7I	CCANNNNNTGG	1 cut(s)	1213
AccBSI	CCGCTC	2 cut(s)	456, 513
AccI	GTMKAC	1 cut(s)	527
AccII	CGCG	6 cut(s)	1088, 1203, 1389, 1540, 1548, 1591
AccIII	TCCGGA	1 cut(s)	744
AclWI	GGATC	3 cut(s)	77, 719, 812
AcoI	YGGCCR	3 cut(s)	288, 1204, 1215
AcsI	RAATTY	1 cut(s)	59
AcuI	CTGAAG	3 cut(s)	214, 1094, 1587
AcyI	GRCGYC	2 cut(s)	784, 945
AfaI	GTAC	4 cut(s)	40, 254, 477, 1424
AgsI	TTSAA	8 cut(s)	345, 571, 589, 733, 841, 889, 1486, 1521
AloI	GAACNNNNNNTCC	2 cut(s)	869, 901
AluBI	AGCT	8 cut(s)	144, 234, 750, 837, 1030, 1434, 1514, 1601
AluI	AGCT	8 cut(s)	144, 234, 750, 837, 1030, 1434, 1514, 1601
Alw21I	GWGCWC	2 cut(s)	752, 1224
Alw26I	GTCTC	3 cut(s)	510, 829, 1564
AlwI	GGATC	3 cut(s)	77, 719, 812
Ama87I	CYCGRG	3 cut(s)	248, 299, 1303
Aor13HI	TCCGGA	1 cut(s)	744
AoxI	GGCC	5 cut(s)	288, 1204, 1215, 1300, 1339
ApeKI	GCWGC	5 cut(s)	330, 333, 1235, 1383, 1633
ApoI	RAATTY	1 cut(s)	59
ArsI	GACNNNNNNTTYG	2 cut(s)	1542, 1574
Asp700I	GAANNNNTTC	3 cut(s)	575, 638, 737
AspLEI	GCGC	5 cut(s)	189, 409, 1391, 1542, 1593
AspS9I	GGNCC	5 cut(s)	1301, 1311, 1339, 1349, 1576
AsuHPI	GGTGA	8 cut(s)	520, 619, 641, 811, 979, 1102, 1117, 1459
AsuNHI	GCTAGC	1 cut(s)	502
AvaI	CYCGRG	3 cut(s)	248, 299, 1303
AvaII	GGWCC	3 cut(s)	1311, 1349, 1576
BaeGI	GKGCMC	1 cut(s)	1623
BanI	GGYRCC	1 cut(s)	1620
BanII	GRGCYC	6 cut(s)	70, 158, 206, 287, 752, 858
BauI	CACGAG	3 cut(s)	199, 826, 1318
BbsI	GAAGAC	1 cut(s)	1383
Bbv12I	GWGCWC	2 cut(s)	752, 1224
BbvI	GCAGC	4 cut(s)	342, 345, 1247, 1395
BccI	CCATC	4 cut(s)	103, 418, 650, 973
BceAI	ACGGC	7 cut(s)	134, 349, 382, 400, 932, 1110, 1202
BcgI	CGANNNNNNTGC	2 cut(s)	319, 353
BcoDI	GTCTC	3 cut(s)	510, 829, 1564
BfaI	CTAG	2 cut(s)	503, 851
BfoI	RGCGCY	1 cut(s)	410
BlpI	GCTNAGC	1 cut(s)	145
Bme18I	GGWCC	3 cut(s)	1311, 1349, 1576
BmeT110I	CYCGRG	3 cut(s)	248, 299, 1303
BmgT120I	GGNCC	5 cut(s)	1301, 1311, 1339, 1349, 1576
BmiI	GGNNCC	8 cut(s)	67, 284, 371, 1312, 1313, 1351, 1578, 1622
BmrI	ACTGGG	2 cut(s)	591, 1171
BmsI	GCATC	1 cut(s)	1186
BmtI	GCTAGC	1 cut(s)	506
BmuI	ACTGGG	2 cut(s)	591, 1171
BpiI	GAAGAC	1 cut(s)	1383
Bpu1102I	GCTNAGC	1 cut(s)	145
BsaAI	YACGTR	2 cut(s)	140, 772
BsaHI	GRCGYC	2 cut(s)	784, 945
BsaJI	CCNNGG	8 cut(s)	157, 205, 248, 365, 398, 1201, 1303, 1392
BsaWI	WCCGGW	4 cut(s)	744, 866, 1570, 1627
Bse118I	RCCGGY	2 cut(s)	724, 989
Bse1I	ACTGG	3 cut(s)	243, 586, 1166
Bse3DI	GCAATG	2 cut(s)	719, 1067
BseAI	TCCGGA	1 cut(s)	744
BseDI	CCNNGG	8 cut(s)	157, 205, 248, 365, 398, 1201, 1303, 1392
BseGI	GGATG	3 cut(s)	95, 549, 741
BseMI	GCAATG	2 cut(s)	719, 1067
BseMII	CTCAG	3 cut(s)	159, 441, 698
BseNI	ACTGG	3 cut(s)	243, 586, 1166
BseRI	GAGGAG	2 cut(s)	226, 1036
BseSI	GKGCMC	1 cut(s)	1623
BseXI	GCAGC	4 cut(s)	342, 345, 1247, 1395
BsgI	GTGCAG	3 cut(s)	344, 1082, 1635
Bsh1236I	CGCG	6 cut(s)	1088, 1203, 1389, 1540, 1548, 1591
Bsh1285I	CGRYCG	2 cut(s)	1125, 1628
BshFI	GGCC	5 cut(s)	290, 1206, 1217, 1302, 1341
BshNI	GGYRCC	1 cut(s)	1620
BsiEI	CGRYCG	2 cut(s)	1125, 1628
BsiHKAI	GWGCWC	2 cut(s)	752, 1224
BsiHKCI	CYCGRG	3 cut(s)	248, 299, 1303
BslFI	GGGAC	6 cut(s)	231, 890, 1018, 1297, 1335, 1562
BsmAI	GTCTC	3 cut(s)	510, 829, 1564
BsmFI	GGGAC	6 cut(s)	231, 890, 1018, 1297, 1335, 1562
BsnI	GGCC	5 cut(s)	290, 1206, 1217, 1302, 1341
BsoBI	CYCGRG	3 cut(s)	248, 299, 1303
Bsp1286I	GDGCHC	8 cut(s)	70, 158, 206, 287, 752, 858, 1224, 1623
Bsp13I	TCCGGA	1 cut(s)	744
Bsp1407I	TGTACA	1 cut(s)	1422
Bsp143I	GATC	5 cut(s)	82, 711, 804, 1122, 1405
Bsp1720I	GCTNAGC	1 cut(s)	145
Bsp68I	TCGCGA	1 cut(s)	1548
BspANI	GGCC	5 cut(s)	290, 1206, 1217, 1302, 1341
BspCNI	CTCAG	3 cut(s)	158, 442, 697
BspEI	TCCGGA	1 cut(s)	744
BspFNI	CGCG	6 cut(s)	1088, 1203, 1389, 1540, 1548, 1591
BspLI	GGNNCC	8 cut(s)	67, 284, 371, 1312, 1313, 1351, 1578, 1622
BspOI	GCTAGC	1 cut(s)	506
BspPI	GGATC	3 cut(s)	77, 719, 812
BspT107I	GGYRCC	1 cut(s)	1620
BsrBI	CCGCTC	2 cut(s)	456, 513
BsrDI	GCAATG	2 cut(s)	719, 1067
BsrFI	RCCGGY	2 cut(s)	724, 989
BsrGI	TGTACA	1 cut(s)	1422
BsrI	ACTGG	3 cut(s)	243, 586, 1166
BssAI	RCCGGY	2 cut(s)	724, 989
BssECI	CCNNGG	8 cut(s)	157, 205, 248, 365, 398, 1201, 1303, 1392
BssMI	GATC	5 cut(s)	82, 711, 804, 1122, 1405
BssNAI	GTATAC	1 cut(s)	528
BssNI	GRCGYC	2 cut(s)	784, 945
BssSI	CACGAG	3 cut(s)	199, 826, 1318
Bst1107I	GTATAC	1 cut(s)	528
Bst2BI	CACGAG	3 cut(s)	199, 826, 1318
Bst4CI	ACNGT	5 cut(s)	791, 1009, 1190, 1369, 1427
Bst6I	CTCTTC	1 cut(s)	1285
BstACI	GRCGYC	2 cut(s)	784, 945
BstAPI	GCANNNNNTGC	1 cut(s)	1069
BstAUI	TGTACA	1 cut(s)	1422
BstBAI	YACGTR	2 cut(s)	140, 772
BstC8I	GCNNGC	6 cut(s)	446, 458, 504, 726, 1215, 1512
BstDEI	CTNAG	3 cut(s)	145, 450, 684
BstDSI	CCRYGG	3 cut(s)	365, 398, 1201
BstEII	GGTNACC	1 cut(s)	647
BstF5I	GGATG	3 cut(s)	95, 549, 741
BstFNI	CGCG	6 cut(s)	1088, 1203, 1389, 1540, 1548, 1591
BstH2I	RGCGCY	1 cut(s)	410
BstHHI	GCGC	5 cut(s)	189, 409, 1391, 1542, 1593
BstKTI	GATC	5 cut(s)	85, 714, 807, 1125, 1408
BstMAI	GTCTC	3 cut(s)	510, 829, 1564
BstMBI	GATC	5 cut(s)	82, 711, 804, 1122, 1405
BstMCI	CGRYCG	2 cut(s)	1125, 1628
BstMWI	GCNNNNNNNGC	6 cut(s)	141, 186, 1069, 1094, 1183, 1219
BstPI	GGTNACC	1 cut(s)	647
BstSLI	GKGCMC	1 cut(s)	1623
BstSNI	TACGTA	1 cut(s)	140
BstUI	CGCG	6 cut(s)	1088, 1203, 1389, 1540, 1548, 1591
BstV1I	GCAGC	4 cut(s)	342, 345, 1247, 1395
BstV2I	GAAGAC	1 cut(s)	1383
BstXI	CCANNNNNNTGG	1 cut(s)	919
BstZ17I	GTATAC	1 cut(s)	528
BsuRI	GGCC	5 cut(s)	290, 1206, 1217, 1302, 1341
BtgI	CCRYGG	3 cut(s)	365, 398, 1201
BtgZI	GCGATG	2 cut(s)	287, 396
BtsCI	GGATG	3 cut(s)	95, 549, 741
BtsIMutI	CAGTG	2 cut(s)	579, 1432
BtuMI	TCGCGA	1 cut(s)	1548
Cac8I	GCNNGC	6 cut(s)	446, 458, 504, 726, 1215, 1512
CfoI	GCGC	5 cut(s)	189, 409, 1391, 1542, 1593
Cfr10I	RCCGGY	2 cut(s)	724, 989
Cfr13I	GGNCC	5 cut(s)	1301, 1311, 1339, 1349, 1576
Cfr42I	CCGCGG	1 cut(s)	1204
Cfr9I	CCCGGG	2 cut(s)	248, 1303
CseI	GACGC	5 cut(s)	325, 792, 827, 953, 1057
Csp6I	GTAC	4 cut(s)	39, 253, 476, 1423
CspCI	CAANNNNNGTGG	2 cut(s)	1509, 1544
CviAII	CATG	3 cut(s)	358, 374, 873
CviQI	GTAC	4 cut(s)	39, 253, 476, 1423
DdeI	CTNAG	3 cut(s)	145, 450, 684
DpnI	GATC	5 cut(s)	84, 713, 806, 1124, 1407
DpnII	GATC	5 cut(s)	82, 711, 804, 1122, 1405
DrdI	GACNNNNNNGTC	1 cut(s)	1151
DseDI	GACNNNNNNGTC	1 cut(s)	1151
EaeI	YGGCCR	3 cut(s)	288, 1204, 1215
Eam1104I	CTCTTC	1 cut(s)	1285
EarI	CTCTTC	1 cut(s)	1285
EciI	GGCGGA	4 cut(s)	47, 229, 1013, 1280
Ecl136II	GAGCTC	1 cut(s)	750
Eco105I	TACGTA	1 cut(s)	140
Eco24I	GRGCYC	6 cut(s)	70, 158, 206, 287, 752, 858
Eco47I	GGWCC	3 cut(s)	1311, 1349, 1576
Eco53kI	GAGCTC	1 cut(s)	750
Eco57I	CTGAAG	3 cut(s)	214, 1094, 1587
Eco88I	CYCGRG	3 cut(s)	248, 299, 1303
Eco91I	GGTNACC	1 cut(s)	647
EcoICRI	GAGCTC	1 cut(s)	750
EcoO109I	RGGNCCY	2 cut(s)	1311, 1349
EcoO65I	GGTNACC	1 cut(s)	647
EcoT38I	GRGCYC	6 cut(s)	70, 158, 206, 287, 752, 858
FaeI	CATG	3 cut(s)	361, 377, 876
FaqI	GGGAC	6 cut(s)	231, 890, 1018, 1297, 1335, 1562
FatI	CATG	3 cut(s)	357, 373, 872
FauI	CCCGC	3 cut(s)	449, 593, 1452
FblI	GTMKAC	1 cut(s)	527
FokI	GGATG	3 cut(s)	82, 536, 728
FriOI	GRGCYC	6 cut(s)	70, 158, 206, 287, 752, 858
FspBI	CTAG	2 cut(s)	503, 851
FspI	TGCGCA	1 cut(s)	188
GlaI	GCGC	5 cut(s)	188, 408, 1390, 1541, 1592
HaeII	RGCGCY	1 cut(s)	410
HaeIII	GGCC	5 cut(s)	290, 1206, 1217, 1302, 1341
HgaI	GACGC	5 cut(s)	325, 792, 827, 953, 1057
HhaI	GCGC	5 cut(s)	189, 409, 1391, 1542, 1593
Hin1I	GRCGYC	2 cut(s)	784, 945
Hin1II	CATG	3 cut(s)	361, 377, 876
Hin6I	GCGC	5 cut(s)	187, 407, 1389, 1540, 1591
HinP1I	GCGC	5 cut(s)	187, 407, 1389, 1540, 1591
HincII	GTYRAC	1 cut(s)	1156
HindII	GTYRAC	1 cut(s)	1156
HindIII	AAGCTT	1 cut(s)	1512
HinfI	GANTC	5 cut(s)	377, 908, 923, 974, 1194
HphI	GGTGA	8 cut(s)	520, 619, 641, 811, 979, 1102, 1117, 1459
Hpy166II	GTNNAC	7 cut(s)	528, 952, 987, 1108, 1129, 1156, 1423
Hpy188III	TCNNGA	5 cut(s)	559, 745, 938, 1333, 1547
Hpy8I	GTNNAC	7 cut(s)	528, 952, 987, 1108, 1129, 1156, 1423
Hpy99I	CGWCG	3 cut(s)	341, 1051, 1148
HpyAV	CCTTC	6 cut(s)	5, 238, 565, 710, 1444, 1604
HpyCH4III	ACNGT	5 cut(s)	791, 1009, 1190, 1369, 1427
HpyCH4V	TGCA	4 cut(s)	76, 325, 1063, 1616
HpyF10VI	GCNNNNNNNGC	6 cut(s)	141, 186, 1069, 1094, 1183, 1219
HpyF3I	CTNAG	3 cut(s)	145, 450, 684
Hsp92I	GRCGYC	2 cut(s)	784, 945
Hsp92II	CATG	3 cut(s)	361, 377, 876
HspAI	GCGC	5 cut(s)	187, 407, 1389, 1540, 1591
KflI	GGGWCCC	1 cut(s)	1311
Kpn2I	TCCGGA	1 cut(s)	744
KroI	GCCGGC	1 cut(s)	724
KroNI	GCCGGC	1 cut(s)	726
KspI	CCGCGG	1 cut(s)	1204
Kzo9I	GATC	5 cut(s)	82, 711, 804, 1122, 1405
LmnI	GCTCC	7 cut(s)	65, 239, 282, 747, 1431, 1468, 1630
Lsp1109I	GCAGC	4 cut(s)	342, 345, 1247, 1395
LweI	GCATC	1 cut(s)	1186
MaeI	CTAG	2 cut(s)	503, 851
MaeIII	GTNAC	4 cut(s)	161, 647, 791, 1090
MalI	GATC	5 cut(s)	84, 713, 806, 1124, 1407
MbiI	CCGCTC	2 cut(s)	456, 513
MboI	GATC	5 cut(s)	82, 711, 804, 1122, 1405
MboII	GAAGA	8 cut(s)	574, 646, 775, 857, 1302, 1388, 1509, 1562
MhlI	GDGCHC	8 cut(s)	70, 158, 206, 287, 752, 858, 1224, 1623
MluCI	AATT	3 cut(s)	59, 766, 900
MlyI	GAGTC	1 cut(s)	1203
MmeI	TCCRAC	5 cut(s)	411, 516, 618, 1167, 1482
MroI	TCCGGA	1 cut(s)	744
MroNI	GCCGGC	1 cut(s)	724
MroXI	GAANNNNTTC	3 cut(s)	575, 638, 737
MseI	TTAA	2 cut(s)	419, 1583
MslI	CAYNNNNRTG	2 cut(s)	654, 1280
MspA1I	CMGCKG	3 cut(s)	600, 1203, 1257
MvnI	CGCG	6 cut(s)	1088, 1203, 1389, 1540, 1548, 1591
MwoI	GCNNNNNNNGC	6 cut(s)	141, 186, 1069, 1094, 1183, 1219
NaeI	GCCGGC	1 cut(s)	726
NdeII	GATC	5 cut(s)	82, 711, 804, 1122, 1405
NgoMIV	GCCGGC	1 cut(s)	724
NheI	GCTAGC	1 cut(s)	502
NlaIII	CATG	3 cut(s)	361, 377, 876
NlaIV	GGNNCC	8 cut(s)	67, 284, 371, 1312, 1313, 1351, 1578, 1622
NmeAIII	GCCGAG	4 cut(s)	720, 974, 1241, 1417
NmuCI	GTSAC	2 cut(s)	647, 1090
NruI	TCGCGA	1 cut(s)	1548
NsbI	TGCGCA	1 cut(s)	188
PcsI	WCGNNNNNNNCGW	2 cut(s)	306, 945
PdiI	GCCGGC	1 cut(s)	726
PdmI	GAANNNNTTC	3 cut(s)	575, 638, 737
PfeI	GAWTC	4 cut(s)	377, 908, 923, 974
PflFI	GACNNNGTC	1 cut(s)	821
PflMI	CCANNNNNTGG	1 cut(s)	1213
PfoI	TCCNGGA	1 cut(s)	278
Ple19I	CGATCG	1 cut(s)	1125
PleI	GAGTC	1 cut(s)	1202
PpsI	GAGTC	1 cut(s)	1202
Ppu21I	YACGTR	2 cut(s)	140, 772
PpuMI	RGGWCCY	2 cut(s)	1311, 1349
Psp124BI	GAGCTC	1 cut(s)	752
Psp5II	RGGWCCY	2 cut(s)	1311, 1349
PspEI	GGTNACC	1 cut(s)	647
PspN4I	GGNNCC	8 cut(s)	67, 284, 371, 1312, 1313, 1351, 1578, 1622
PspPI	GGNCC	5 cut(s)	1301, 1311, 1339, 1349, 1576
PspPPI	RGGWCCY	2 cut(s)	1311, 1349
PsrI	GAACNNNNNNTAC	4 cut(s)	120, 152, 1142, 1174
PsyI	GACNNNGTC	1 cut(s)	821
PvuI	CGATCG	1 cut(s)	1125
RruI	TCGCGA	1 cut(s)	1548
RsaI	GTAC	4 cut(s)	40, 254, 477, 1424
RsaNI	GTAC	4 cut(s)	39, 253, 476, 1423
RseI	CAYNNNNRTG	2 cut(s)	654, 1280
SacI	GAGCTC	1 cut(s)	752
SacII	CCGCGG	1 cut(s)	1204
SaqAI	TTAA	2 cut(s)	419, 1583
Sau3AI	GATC	5 cut(s)	82, 711, 804, 1122, 1405
Sau96I	GGNCC	5 cut(s)	1301, 1311, 1339, 1349, 1576
SchI	GAGTC	1 cut(s)	1203
SduI	GDGCHC	8 cut(s)	70, 158, 206, 287, 752, 858, 1224, 1623
SfaNI	GCATC	1 cut(s)	1186
Sfr303I	CCGCGG	1 cut(s)	1204
SgrBI	CCGCGG	1 cut(s)	1204
SinI	GGWCC	3 cut(s)	1311, 1349, 1576
SmaI	CCCGGG	2 cut(s)	250, 1305
SmiMI	CAYNNNNRTG	2 cut(s)	654, 1280
SnaBI	TACGTA	1 cut(s)	140
Sse9I	AATT	3 cut(s)	59, 766, 900
SspMI	CTAG	2 cut(s)	503, 851
SstI	GAGCTC	1 cut(s)	752
TaaI	ACNGT	5 cut(s)	791, 1009, 1190, 1369, 1427
TaqI	TCGA	2 cut(s)	977, 1046
TaqII	GACCGA	1 cut(s)	1318
TasI	AATT	3 cut(s)	59, 766, 900
TatI	WGTACW	1 cut(s)	1422
TauI	GCSGC	6 cut(s)	1121, 1137, 1206, 1235, 1260, 1389
TfiI	GAWTC	4 cut(s)	377, 908, 923, 974
Tru1I	TTAA	2 cut(s)	419, 1583
Tru9I	TTAA	2 cut(s)	419, 1583
TscAI	CASTG	2 cut(s)	586, 1432
TseFI	GTSAC	2 cut(s)	647, 1090
TseI	GCWGC	5 cut(s)	330, 333, 1235, 1383, 1633
Tsp45I	GTSAC	2 cut(s)	647, 1090
TspDTI	ATGAA	4 cut(s)	390, 730, 770, 861
TspGWI	ACGGA	1 cut(s)	724
TspMI	CCCGGG	2 cut(s)	248, 1303
TspRI	CASTG	2 cut(s)	586, 1432
Tth111I	GACNNNGTC	1 cut(s)	821
Van91I	CCANNNNNTGG	1 cut(s)	1213
VpaK11BI	GGWCC	3 cut(s)	1311, 1349, 1576
XapI	RAATTY	1 cut(s)	59
XcmI	CCANNNNNNNNNTGG	1 cut(s)	601
XmaI	CCCGGG	2 cut(s)	248, 1303
XmiI	GTMKAC	1 cut(s)	527
XmnI	GAANNNNTTC	3 cut(s)	575, 638, 737
XspI	CTAG	2 cut(s)	503, 851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.