Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0012864

Physical Location & Seq

Genomic Coordinates Forward (+)

53780736 .. 53782256

Gene Structure 1521 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014479

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGTGGCCGAACGTACCACATTCCACAGACCAAAATTCGGAGCCCTATTGCAGTCCGATCCGAACATACCATCCCCAAATACACACAACAACAGCGATAAAGAACGCAGCATACGTAGCTCAGCCGTGAGCCCCGGTTACTACGACAACAACAGCAACGTACGCAGCTCAGCCACGAGCCCCGGTTATTACGACAACAACCCCTTCAGCTCCTCCGCCAGTCCCGGGTACTACGACAACGCAAGTGCGATGTCCGCGAGCCCGGCCACAACTCTCGGGTTCTACGATAACAACAACGTGCAGGGCAGCAGCGTCGGTTCAACTCCATACGCCATGTCGCCGTGGAACCATGAGTCGCCGTACAACAAGTCGCCGTGGATAGCGCCATCGCCGTTAAACCCGTTGTTGGACGAGAGGTGCTTGCCTGAGAGCGGGCTTGTTGGGTCGTTGGTACGAGAACAAGGGCATATATATTCGCTAGCGGTGAGCGGAGACTTGTTGTATACCGGGTCGGATAGTAAGAACATCCGGGTCTGGAAGAACTTGAAGGATTTCACCGGGTTCAAATCCAACAGCGGGTTGGTGAAAACCATTGTGATTTGCGGAGAGAAGATATTCACGGGTCACCAAGATGGAAAAATCCGGGTATGGAAAGTTTCTCAGAAAAAGCCGAGCCTTCATAAAAGGATCGGGTCATTACCGGCGTTGAAAGATTTCATCCGGAGCTCTATGAACCCGAAGAATTACGTGGAGGTCAGACGCCACCGTAACGTGGTGAGGATCAGACACTTTGACGCAGTCTCGTGTATGAGCTTGAACGAAGAACTAGGGCTCTTATATTCCGGTTCATGGGACAAGACGTTCAAGGTTTGGAGAATTGCCGATTCCAAGTGTTTGGAATCTGTATCGGCTCACGATGACGCCGTGAACTCTGTGGTCGTTGGTTTTGATTCGTTGGTGTTCACCGGCTCGGCGGACGGGACTGTAAAAGTGTGGAGGAGAGAGCTACAAGGAAAAGGCTCGACGCATTTCTTGGTGCAGACATTGCTGAAGCAAGAGAACGCGGTGACGGCATTGGCGGTGAACCAATCGGCGGCGATCATTTACTGTGGCTCGTCGGATGGGAACGTCAACTACTGGGAACGTGAGAAGCATCTTTCGCACGGTGGGGTCCTCCGCGGCCACAGGCTCGCCGTGCTCTGCCTTGCCGCAGCCGGGAACTTGGTGTTCAGCGGCTCGGCGGACAAGAACATTTGCGTGTGGAGAAGGGAGGTTGGCCCGGGAGGGTCCCACTCATGCCTGTCGGTCTTGACGGGCCACTTAGGGCCAGTCAAGTGTCTGACAGTAGAGGAAGACCGCAGCCGCACCGAGGACAAAACTGACCAGAAATGGATTGTGTACAGTGGGAGCTTGGATAGGTCGGTGAAGGTGTGGCGGGTTTCTGAGCAACCACCAGACTTAAGGCGGATGGTGTTGTCGGAGAAGCAAGCTTCTTCTAGGAGCAACTATTCTAACTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007049 GO:0008092 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016905 GO:0017022 GO:0017076 GO:0018107 GO:0018193 GO:0018210 GO:0019538 GO:0022402 GO:0022411 GO:0030029 GO:0030036 GO:0030554 GO:0030863 GO:0030864 GO:0031033 GO:0031035 GO:0031037 GO:0031038 GO:0032153 GO:0032155 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045159 GO:0046777 GO:0051301 GO:0061640 GO:0070938 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0099568 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

507

Amino Acids

55.82

Weight (kDa)

9.2

Isoelectric Point (pI)

57.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_SCAP	PF24017	154 - 383	1.4e-12	SCAP Beta-propeller
Beta-prop_WDR3_1st	PF25173	258 - 333	9.7e-10	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	258 - 421	1.4e-10	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	260 - 335	3.5e-07	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	262 - 333	1.1e-12	WDR5 beta-propeller domain
WDR55	PF24796	262 - 365	7e-07	WDR55
Beta-prop_TEP1_2nd	PF25047	263 - 341	7.2e-06	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	265 - 384	4.6e-10	THOC3 beta-propeller domain
WD40_Prp19	PF24814	266 - 383	3.4e-13	Prp19 WD40 domain
Beta-prop_WDR3_2nd	PF25172	267 - 383	3.7e-12	WDR3 second beta-propeller domain
NBCH_WD40	PF20426	269 - 333	9.6e-09	Neurobeachin beta propeller domain
Beta-prop_EML_2	PF23414	276 - 423	1.1e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40	PF00400	297 - 332	5.6e-06	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	345 - 483	1.2e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	345 - 483	3.4e-16	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	349 - 497	1.1e-08	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	353 - 450	4.8e-08	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	364 - 492	1.5e-10	TEP-1 second beta-propeller
WD40_Prp19	PF24814	400 - 483	1.9e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49450 AT3G18950
fragaria_vesca	FvH4_2g07401
malus_domestica	MD00G1129400.v1.1 MD10G1086000.v1.1
prunus_persica	Prupe.8G110400_v2.0.a1
pyrus_communis	pycom10g06780
rosa_chinensis	RchiOBHm_Chr6g0260861
rosa_laevigata	RLG00000014479
rosa_multiflora	Rmu_sc0000588.1_g000049 Rmu_sc0005980.1_g000006
rosa_roxburghii	Rroxscaffold_7G00207480
rosa_samantha	Rh6AG112700 Rh6BG106500 Rh6CG103800 Rh6DG094700
rosa_wichuraiana	Rw6G009560 Rw6G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	432, 489
AccI	GTMKAC	1 cut(s)	503
AccII	CGCG	3 cut(s)	257, 1064, 1179
AccIII	TCCGGA	1 cut(s)	720
AclWI	GGATC	3 cut(s)	53, 695, 788
AcoI	YGGCCR	3 cut(s)	6, 264, 1180
AcsI	RAATTY	1 cut(s)	35
AcuI	CTGAAG	2 cut(s)	190, 1070
AcyI	GRCGYC	2 cut(s)	760, 921
AfaI	GTAC	6 cut(s)	16, 162, 230, 362, 453, 1400
AflII	CTTAAG	1 cut(s)	1459
AgsI	TTSAA	6 cut(s)	321, 547, 565, 709, 817, 865
AloI	GAACNNNNNNTCC	4 cut(s)	56, 88, 845, 877
AluBI	AGCT	8 cut(s)	120, 168, 210, 726, 813, 1006, 1410, 1490
AluI	AGCT	8 cut(s)	120, 168, 210, 726, 813, 1006, 1410, 1490
Alw21I	GWGCWC	2 cut(s)	728, 1200
Alw26I	GTCTC	2 cut(s)	486, 805
AlwI	GGATC	3 cut(s)	53, 695, 788
Ama87I	CYCGRG	3 cut(s)	224, 275, 1279
Aor13HI	TCCGGA	1 cut(s)	720
AoxI	GGCC	6 cut(s)	6, 264, 1180, 1276, 1315, 1325
ApeKI	GCWGC	6 cut(s)	108, 165, 306, 309, 1211, 1359
ApoI	RAATTY	1 cut(s)	35
Asp700I	GAANNNNTTC	3 cut(s)	551, 614, 713
AspLEI	GCGC	1 cut(s)	385
AspS9I	GGNCC	5 cut(s)	1171, 1277, 1287, 1315, 1325
AsuHPI	GGTGA	9 cut(s)	496, 547, 595, 617, 787, 955, 1078, 1093, 1435
AsuNHI	GCTAGC	1 cut(s)	478
AvaI	CYCGRG	3 cut(s)	224, 275, 1279
AvaII	GGWCC	2 cut(s)	1171, 1287
BanII	GRGCYC	6 cut(s)	46, 134, 182, 263, 728, 834
BauI	CACGAG	2 cut(s)	175, 802
BbsI	GAAGAC	1 cut(s)	1359
Bbv12I	GWGCWC	2 cut(s)	728, 1200
BbvI	GCAGC	6 cut(s)	120, 177, 318, 321, 1223, 1371
BccI	CCATC	5 cut(s)	79, 394, 626, 1115, 1462
BceAI	ACGGC	8 cut(s)	110, 325, 343, 358, 376, 908, 1086, 1178
BcgI	CGANNNNNNTGC	2 cut(s)	295, 329
BcoDI	GTCTC	2 cut(s)	486, 805
BfaI	CTAG	3 cut(s)	479, 827, 1497
BfoI	RGCGCY	1 cut(s)	386
BfrI	CTTAAG	1 cut(s)	1459
BlpI	GCTNAGC	2 cut(s)	121, 169
Bme18I	GGWCC	2 cut(s)	1171, 1287
BmeT110I	CYCGRG	3 cut(s)	224, 275, 1279
BmgT120I	GGNCC	5 cut(s)	1171, 1277, 1287, 1315, 1325
BmiI	GGNNCC	5 cut(s)	43, 347, 1172, 1288, 1289
BmrI	ACTGGG	1 cut(s)	1147
BmsI	GCATC	1 cut(s)	1162
BmtI	GCTAGC	1 cut(s)	482
BmuI	ACTGGG	1 cut(s)	1147
BpiI	GAAGAC	1 cut(s)	1359
Bpu1102I	GCTNAGC	2 cut(s)	121, 169
BsaAI	YACGTR	2 cut(s)	116, 748
BsaHI	GRCGYC	2 cut(s)	760, 921
BsaJI	CCNNGG	8 cut(s)	133, 181, 224, 341, 374, 1177, 1279, 1368
BsaWI	WCCGGW	2 cut(s)	720, 842
Bse118I	RCCGGY	2 cut(s)	700, 965
Bse1I	ACTGG	3 cut(s)	219, 1142, 1328
Bse3DI	GCAATG	1 cut(s)	1043
BseAI	TCCGGA	1 cut(s)	720
BseDI	CCNNGG	8 cut(s)	133, 181, 224, 341, 374, 1177, 1279, 1368
BseGI	GGATG	5 cut(s)	71, 525, 717, 1126, 1473
BseMI	GCAATG	1 cut(s)	1043
BseMII	CTCAG	5 cut(s)	135, 183, 417, 674, 1434
BseNI	ACTGG	3 cut(s)	219, 1142, 1328
BseRI	GAGGAG	2 cut(s)	202, 1012
BseXI	GCAGC	6 cut(s)	120, 177, 318, 321, 1223, 1371
BsgI	GTGCAG	2 cut(s)	320, 1058
Bsh1236I	CGCG	3 cut(s)	257, 1064, 1179
BshFI	GGCC	6 cut(s)	8, 266, 1182, 1278, 1317, 1327
BsiHKAI	GWGCWC	2 cut(s)	728, 1200
BsiHKCI	CYCGRG	3 cut(s)	224, 275, 1279
BsiWI	CGTACG	1 cut(s)	160
BslFI	GGGAC	4 cut(s)	207, 866, 994, 1273
BsmAI	GTCTC	2 cut(s)	486, 805
BsmFI	GGGAC	4 cut(s)	207, 866, 994, 1273
BsnI	GGCC	6 cut(s)	8, 266, 1182, 1278, 1317, 1327
BsoBI	CYCGRG	3 cut(s)	224, 275, 1279
Bsp1286I	GDGCHC	7 cut(s)	46, 134, 182, 263, 728, 834, 1200
Bsp13I	TCCGGA	1 cut(s)	720
Bsp1407I	TGTACA	1 cut(s)	1398
Bsp143I	GATC	4 cut(s)	58, 687, 780, 1098
Bsp1720I	GCTNAGC	2 cut(s)	121, 169
BspANI	GGCC	6 cut(s)	8, 266, 1182, 1278, 1317, 1327
BspCNI	CTCAG	5 cut(s)	134, 182, 418, 673, 1435
BspEI	TCCGGA	1 cut(s)	720
BspFNI	CGCG	3 cut(s)	257, 1064, 1179
BspLI	GGNNCC	5 cut(s)	43, 347, 1172, 1288, 1289
BspOI	GCTAGC	1 cut(s)	482
BspPI	GGATC	3 cut(s)	53, 695, 788
BspTI	CTTAAG	1 cut(s)	1459
BsrBI	CCGCTC	2 cut(s)	432, 489
BsrDI	GCAATG	1 cut(s)	1043
BsrFI	RCCGGY	2 cut(s)	700, 965
BsrGI	TGTACA	1 cut(s)	1398
BsrI	ACTGG	3 cut(s)	219, 1142, 1328
BssAI	RCCGGY	2 cut(s)	700, 965
BssECI	CCNNGG	8 cut(s)	133, 181, 224, 341, 374, 1177, 1279, 1368
BssMI	GATC	4 cut(s)	58, 687, 780, 1098
BssNAI	GTATAC	1 cut(s)	504
BssNI	GRCGYC	2 cut(s)	760, 921
BssSI	CACGAG	2 cut(s)	175, 802
Bst1107I	GTATAC	1 cut(s)	504
Bst2BI	CACGAG	2 cut(s)	175, 802
Bst4CI	ACNGT	6 cut(s)	767, 985, 1109, 1166, 1345, 1403
BstACI	GRCGYC	2 cut(s)	760, 921
BstAFI	CTTAAG	1 cut(s)	1459
BstAPI	GCANNNNNTGC	1 cut(s)	1045
BstAUI	TGTACA	1 cut(s)	1398
BstBAI	YACGTR	2 cut(s)	116, 748
BstC8I	GCNNGC	6 cut(s)	259, 422, 434, 480, 1191, 1488
BstDEI	CTNAG	6 cut(s)	121, 169, 426, 660, 1321, 1443
BstDSI	CCRYGG	3 cut(s)	341, 374, 1177
BstEII	GGTNACC	1 cut(s)	623
BstF5I	GGATG	5 cut(s)	71, 525, 717, 1126, 1473
BstFNI	CGCG	3 cut(s)	257, 1064, 1179
BstH2I	RGCGCY	1 cut(s)	386
BstHHI	GCGC	1 cut(s)	385
BstKTI	GATC	4 cut(s)	61, 690, 783, 1101
BstMAI	GTCTC	2 cut(s)	486, 805
BstMBI	GATC	4 cut(s)	58, 687, 780, 1098
BstMWI	GCNNNNNNNGC	8 cut(s)	117, 162, 254, 263, 1045, 1070, 1159, 1195
BstPI	GGTNACC	1 cut(s)	623
BstSNI	TACGTA	1 cut(s)	116
BstUI	CGCG	3 cut(s)	257, 1064, 1179
BstV1I	GCAGC	6 cut(s)	120, 177, 318, 321, 1223, 1371
BstV2I	GAAGAC	1 cut(s)	1359
BstXI	CCANNNNNNTGG	1 cut(s)	895
BstZ17I	GTATAC	1 cut(s)	504
BsuRI	GGCC	6 cut(s)	8, 266, 1182, 1278, 1317, 1327
BtgI	CCRYGG	3 cut(s)	341, 374, 1177
BtgZI	GCGATG	2 cut(s)	263, 372
BtsCI	GGATG	5 cut(s)	71, 525, 717, 1126, 1473
BtsIMutI	CAGTG	1 cut(s)	1408
Cac8I	GCNNGC	6 cut(s)	259, 422, 434, 480, 1191, 1488
CfoI	GCGC	1 cut(s)	385
Cfr10I	RCCGGY	2 cut(s)	700, 965
Cfr13I	GGNCC	5 cut(s)	1171, 1277, 1287, 1315, 1325
Cfr42I	CCGCGG	1 cut(s)	1180
Cfr9I	CCCGGG	2 cut(s)	224, 1279
CseI	GACGC	5 cut(s)	301, 768, 803, 929, 1033
Csp6I	GTAC	6 cut(s)	15, 161, 229, 361, 452, 1399
CviAII	CATG	4 cut(s)	334, 350, 849, 1296
CviQI	GTAC	6 cut(s)	15, 161, 229, 361, 452, 1399
DdeI	CTNAG	6 cut(s)	121, 169, 426, 660, 1321, 1443
DpnI	GATC	4 cut(s)	60, 689, 782, 1100
DpnII	GATC	4 cut(s)	58, 687, 780, 1098
EaeI	YGGCCR	3 cut(s)	6, 264, 1180
EciI	GGCGGA	4 cut(s)	205, 989, 1256, 1480
Ecl136II	GAGCTC	1 cut(s)	726
Eco105I	TACGTA	1 cut(s)	116
Eco24I	GRGCYC	6 cut(s)	46, 134, 182, 263, 728, 834
Eco47I	GGWCC	2 cut(s)	1171, 1287
Eco53kI	GAGCTC	1 cut(s)	726
Eco57I	CTGAAG	2 cut(s)	190, 1070
Eco88I	CYCGRG	3 cut(s)	224, 275, 1279
Eco91I	GGTNACC	1 cut(s)	623
EcoICRI	GAGCTC	1 cut(s)	726
EcoO109I	RGGNCCY	2 cut(s)	1171, 1287
EcoO65I	GGTNACC	1 cut(s)	623
EcoT38I	GRGCYC	6 cut(s)	46, 134, 182, 263, 728, 834
FaeI	CATG	4 cut(s)	337, 353, 852, 1299
FaqI	GGGAC	4 cut(s)	207, 866, 994, 1273
FatI	CATG	4 cut(s)	333, 349, 848, 1295
FauI	CCCGC	3 cut(s)	425, 569, 1428
FblI	GTMKAC	1 cut(s)	503
FokI	GGATG	5 cut(s)	58, 512, 704, 1133, 1480
FriOI	GRGCYC	6 cut(s)	46, 134, 182, 263, 728, 834
FspBI	CTAG	3 cut(s)	479, 827, 1497
GlaI	GCGC	1 cut(s)	384
HaeII	RGCGCY	1 cut(s)	386
HaeIII	GGCC	6 cut(s)	8, 266, 1182, 1278, 1317, 1327
HgaI	GACGC	5 cut(s)	301, 768, 803, 929, 1033
HhaI	GCGC	1 cut(s)	385
Hin1I	GRCGYC	2 cut(s)	760, 921
Hin1II	CATG	4 cut(s)	337, 353, 852, 1299
Hin6I	GCGC	1 cut(s)	383
HinP1I	GCGC	1 cut(s)	383
HincII	GTYRAC	1 cut(s)	1132
HindII	GTYRAC	1 cut(s)	1132
HindIII	AAGCTT	1 cut(s)	1488
HinfI	GANTC	4 cut(s)	353, 884, 899, 950
HphI	GGTGA	9 cut(s)	496, 547, 595, 617, 787, 955, 1078, 1093, 1435
Hpy166II	GTNNAC	6 cut(s)	504, 928, 963, 1084, 1132, 1399
Hpy188III	TCNNGA	4 cut(s)	535, 721, 914, 1309
Hpy8I	GTNNAC	6 cut(s)	504, 928, 963, 1084, 1132, 1399
Hpy99I	CGWCG	3 cut(s)	317, 1027, 1120
HpyAV	CCTTC	5 cut(s)	214, 541, 686, 1260, 1420
HpyCH4III	ACNGT	6 cut(s)	767, 985, 1109, 1166, 1345, 1403
HpyCH4IV	ACGT	9 cut(s)	13, 115, 159, 297, 747, 771, 860, 1128, 1144
HpyCH4V	TGCA	3 cut(s)	52, 301, 1039
HpyF10VI	GCNNNNNNNGC	8 cut(s)	117, 162, 254, 263, 1045, 1070, 1159, 1195
HpyF3I	CTNAG	6 cut(s)	121, 169, 426, 660, 1321, 1443
HpySE526I	ACGT	9 cut(s)	13, 115, 159, 297, 747, 771, 860, 1128, 1144
Hsp92I	GRCGYC	2 cut(s)	760, 921
Hsp92II	CATG	4 cut(s)	337, 353, 852, 1299
HspAI	GCGC	1 cut(s)	383
KflI	GGGWCCC	1 cut(s)	1287
Kpn2I	TCCGGA	1 cut(s)	720
KspI	CCGCGG	1 cut(s)	1180
Kzo9I	GATC	4 cut(s)	58, 687, 780, 1098
LmnI	GCTCC	5 cut(s)	41, 215, 723, 1407, 1500
Lsp1109I	GCAGC	6 cut(s)	120, 177, 318, 321, 1223, 1371
LweI	GCATC	1 cut(s)	1162
MaeI	CTAG	3 cut(s)	479, 827, 1497
MaeII	ACGT	9 cut(s)	13, 115, 159, 297, 747, 771, 860, 1128, 1144
MaeIII	GTNAC	4 cut(s)	137, 623, 767, 1066
MalI	GATC	4 cut(s)	60, 689, 782, 1100
MbiI	CCGCTC	2 cut(s)	432, 489
MboI	GATC	4 cut(s)	58, 687, 780, 1098
MboII	GAAGA	6 cut(s)	550, 622, 751, 833, 1364, 1485
MhlI	GDGCHC	7 cut(s)	46, 134, 182, 263, 728, 834, 1200
MluCI	AATT	3 cut(s)	35, 742, 876
MlyI	GAGTC	1 cut(s)	362
MmeI	TCCRAC	5 cut(s)	387, 492, 594, 1098, 1458
MroI	TCCGGA	1 cut(s)	720
MroXI	GAANNNNTTC	3 cut(s)	551, 614, 713
MseI	TTAA	2 cut(s)	395, 1460
MslI	CAYNNNNRTG	2 cut(s)	630, 1256
MspA1I	CMGCKG	3 cut(s)	576, 1179, 1233
MspCI	CTTAAG	1 cut(s)	1459
MvnI	CGCG	3 cut(s)	257, 1064, 1179
MwoI	GCNNNNNNNGC	8 cut(s)	117, 162, 254, 263, 1045, 1070, 1159, 1195
NdeII	GATC	4 cut(s)	58, 687, 780, 1098
NheI	GCTAGC	1 cut(s)	478
NlaIII	CATG	4 cut(s)	337, 353, 852, 1299
NlaIV	GGNNCC	5 cut(s)	43, 347, 1172, 1288, 1289
NmeAIII	GCCGAG	3 cut(s)	696, 950, 1217
NmuCI	GTSAC	2 cut(s)	623, 1066
PcsI	WCGNNNNNNNCGW	3 cut(s)	112, 282, 921
PdmI	GAANNNNTTC	3 cut(s)	551, 614, 713
PfeI	GAWTC	3 cut(s)	884, 899, 950
Pfl23II	CGTACG	1 cut(s)	160
PflFI	GACNNNGTC	1 cut(s)	797
PleI	GAGTC	1 cut(s)	361
PpsI	GAGTC	1 cut(s)	361
Ppu21I	YACGTR	2 cut(s)	116, 748
PpuMI	RGGWCCY	2 cut(s)	1171, 1287
Psp124BI	GAGCTC	1 cut(s)	728
Psp5II	RGGWCCY	2 cut(s)	1171, 1287
PspEI	GGTNACC	1 cut(s)	623
PspLI	CGTACG	1 cut(s)	160
PspN4I	GGNNCC	5 cut(s)	43, 347, 1172, 1288, 1289
PspPI	GGNCC	5 cut(s)	1171, 1277, 1287, 1315, 1325
PspPPI	RGGWCCY	2 cut(s)	1171, 1287
PsrI	GAACNNNNNNTAC	4 cut(s)	96, 128, 1118, 1150
PsyI	GACNNNGTC	1 cut(s)	797
RsaI	GTAC	6 cut(s)	16, 162, 230, 362, 453, 1400
RsaNI	GTAC	6 cut(s)	15, 161, 229, 361, 452, 1399
RseI	CAYNNNNRTG	2 cut(s)	630, 1256
SacI	GAGCTC	1 cut(s)	728
SacII	CCGCGG	1 cut(s)	1180
SaqAI	TTAA	2 cut(s)	395, 1460
Sau3AI	GATC	4 cut(s)	58, 687, 780, 1098
Sau96I	GGNCC	5 cut(s)	1171, 1277, 1287, 1315, 1325
SchI	GAGTC	1 cut(s)	362
SduI	GDGCHC	7 cut(s)	46, 134, 182, 263, 728, 834, 1200
SfaNI	GCATC	1 cut(s)	1162
Sfr303I	CCGCGG	1 cut(s)	1180
SgrBI	CCGCGG	1 cut(s)	1180
SinI	GGWCC	2 cut(s)	1171, 1287
SmaI	CCCGGG	2 cut(s)	226, 1281
SmiMI	CAYNNNNRTG	2 cut(s)	630, 1256
SmlI	CTYRAG	1 cut(s)	1459
SmoI	CTYRAG	1 cut(s)	1459
SnaBI	TACGTA	1 cut(s)	116
Sse9I	AATT	3 cut(s)	35, 742, 876
SspMI	CTAG	3 cut(s)	479, 827, 1497
SstI	GAGCTC	1 cut(s)	728
TaaI	ACNGT	6 cut(s)	767, 985, 1109, 1166, 1345, 1403
TaiI	ACGT	9 cut(s)	16, 118, 162, 300, 750, 774, 863, 1131, 1147
TaqI	TCGA	1 cut(s)	1022
TaqII	GACCGA	1 cut(s)	1294
TasI	AATT	3 cut(s)	35, 742, 876
TatI	WGTACW	1 cut(s)	1398
TauI	GCSGC	5 cut(s)	1097, 1182, 1211, 1236, 1365
TfiI	GAWTC	3 cut(s)	884, 899, 950
Tru1I	TTAA	2 cut(s)	395, 1460
Tru9I	TTAA	2 cut(s)	395, 1460
TscAI	CASTG	1 cut(s)	1408
TseFI	GTSAC	2 cut(s)	623, 1066
TseI	GCWGC	6 cut(s)	108, 165, 306, 309, 1211, 1359
Tsp45I	GTSAC	2 cut(s)	623, 1066
TspDTI	ATGAA	4 cut(s)	668, 706, 746, 837
TspMI	CCCGGG	2 cut(s)	224, 1279
TspRI	CASTG	1 cut(s)	1408
Tth111I	GACNNNGTC	1 cut(s)	797
Vha464I	CTTAAG	1 cut(s)	1459
VpaK11BI	GGWCC	2 cut(s)	1171, 1287
XapI	RAATTY	1 cut(s)	35
XcmI	CCANNNNNNNNNTGG	1 cut(s)	577
XmaI	CCCGGG	2 cut(s)	224, 1279
XmiI	GTMKAC	1 cut(s)	503
XmnI	GAANNNNTTC	3 cut(s)	551, 614, 713
XspI	CTAG	3 cut(s)	479, 827, 1497

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.