Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g21311 |
| prunus_persica | Prupe.3G010000_v2.0.a1 Prupe.4G174500_v2.0.a1 Prupe.6G123500_v2.0.a1 |
| pyrus_communis | pycom10g09650 |
| rosa_rugosa | Rorug02G0245200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AclWI | GGATC | 2 cut(s) | 59, 109 |
| AcsI | RAATTY | 3 cut(s) | 44, 115, 187 |
| AcyI | GRCGYC | 1 cut(s) | 141 |
| AgeI | ACCGGT | 1 cut(s) | 165 |
| AgsI | TTSAA | 1 cut(s) | 28 |
| AluBI | AGCT | 1 cut(s) | 88 |
| AluI | AGCT | 1 cut(s) | 88 |
| Alw26I | GTCTC | 1 cut(s) | 33 |
| AlwI | GGATC | 2 cut(s) | 59, 109 |
| ApoI | RAATTY | 3 cut(s) | 44, 115, 187 |
| AsiGI | ACCGGT | 1 cut(s) | 165 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 18 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| BccI | CCATC | 2 cut(s) | 92, 275 |
| BcoDI | GTCTC | 1 cut(s) | 33 |
| BfaI | CTAG | 2 cut(s) | 105, 290 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BmsI | GCATC | 2 cut(s) | 202, 253 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 270, 302 |
| BsaHI | GRCGYC | 1 cut(s) | 141 |
| BsaWI | WCCGGW | 1 cut(s) | 165 |
| Bse118I | RCCGGY | 1 cut(s) | 165 |
| Bse1I | ACTGG | 1 cut(s) | 120 |
| BseGI | GGATG | 3 cut(s) | 67, 103, 268 |
| BseNI | ACTGG | 1 cut(s) | 120 |
| Bsh1285I | CGRYCG | 1 cut(s) | 166 |
| BshTI | ACCGGT | 1 cut(s) | 165 |
| BsiEI | CGRYCG | 1 cut(s) | 166 |
| BsiSI | CCGG | 1 cut(s) | 166 |
| BslFI | GGGAC | 1 cut(s) | 207 |
| BsmAI | GTCTC | 1 cut(s) | 33 |
| BsmFI | GGGAC | 1 cut(s) | 207 |
| Bsp143I | GATC | 4 cut(s) | 64, 101, 151, 271 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 2 cut(s) | 59, 109 |
| BsrFI | RCCGGY | 1 cut(s) | 165 |
| BsrI | ACTGG | 1 cut(s) | 120 |
| BssAI | RCCGGY | 1 cut(s) | 165 |
| BssMI | GATC | 4 cut(s) | 64, 101, 151, 271 |
| BssNI | GRCGYC | 1 cut(s) | 141 |
| BstACI | GRCGYC | 1 cut(s) | 141 |
| BstF5I | GGATG | 3 cut(s) | 67, 103, 268 |
| BstKTI | GATC | 4 cut(s) | 67, 104, 154, 274 |
| BstMAI | GTCTC | 1 cut(s) | 33 |
| BstMBI | GATC | 4 cut(s) | 64, 101, 151, 271 |
| BstMCI | CGRYCG | 1 cut(s) | 166 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BstX2I | RGATCY | 1 cut(s) | 101 |
| BstYI | RGATCY | 1 cut(s) | 101 |
| BtsCI | GGATG | 3 cut(s) | 67, 103, 268 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cfr10I | RCCGGY | 1 cut(s) | 165 |
| CseI | GACGC | 1 cut(s) | 130 |
| CspAI | ACCGGT | 1 cut(s) | 165 |
| CviJI | RGCY | 4 cut(s) | 7, 88, 177, 293 |
| CviKI_1 | RGCY | 4 cut(s) | 7, 88, 177, 293 |
| DpnI | GATC | 4 cut(s) | 66, 103, 153, 273 |
| DpnII | GATC | 4 cut(s) | 64, 101, 151, 271 |
| FaiI | YATR | 6 cut(s) | 76, 156, 223, 232, 303, 311 |
| FaqI | GGGAC | 1 cut(s) | 207 |
| FokI | GGATG | 3 cut(s) | 74, 110, 275 |
| FspBI | CTAG | 2 cut(s) | 105, 290 |
| HapII | CCGG | 1 cut(s) | 166 |
| HgaI | GACGC | 1 cut(s) | 130 |
| Hin1I | GRCGYC | 1 cut(s) | 141 |
| HinfI | GANTC | 1 cut(s) | 285 |
| HpaII | CCGG | 1 cut(s) | 166 |
| Hpy166II | GTNNAC | 1 cut(s) | 242 |
| Hpy188III | TCNNGA | 4 cut(s) | 36, 68, 105, 278 |
| Hpy8I | GTNNAC | 1 cut(s) | 242 |
| HpyAV | CCTTC | 1 cut(s) | 102 |
| HpyCH4IV | ACGT | 1 cut(s) | 93 |
| HpySE526I | ACGT | 1 cut(s) | 93 |
| Hsp92I | GRCGYC | 1 cut(s) | 141 |
| Kzo9I | GATC | 4 cut(s) | 64, 101, 151, 271 |
| LpnPI | CCDG | 6 cut(s) | 44, 81, 133, 179, 188, 201 |
| LweI | GCATC | 2 cut(s) | 202, 253 |
| MaeI | CTAG | 2 cut(s) | 105, 290 |
| MaeII | ACGT | 1 cut(s) | 93 |
| MalI | GATC | 4 cut(s) | 66, 103, 153, 273 |
| MboI | GATC | 4 cut(s) | 64, 101, 151, 271 |
| MboII | GAAGA | 2 cut(s) | 11, 266 |
| MflI | RGATCY | 1 cut(s) | 101 |
| MluCI | AATT | 4 cut(s) | 44, 115, 126, 187 |
| MlyI | GAGTC | 1 cut(s) | 279 |
| MnlI | CCTC | 1 cut(s) | 167 |
| MroXI | GAANNNNTTC | 1 cut(s) | 18 |
| MseI | TTAA | 1 cut(s) | 170 |
| MspI | CCGG | 1 cut(s) | 166 |
| NdeII | GATC | 4 cut(s) | 64, 101, 151, 271 |
| PdmI | GAANNNNTTC | 1 cut(s) | 18 |
| PinAI | ACCGGT | 1 cut(s) | 165 |
| PleI | GAGTC | 1 cut(s) | 279 |
| PpsI | GAGTC | 1 cut(s) | 279 |
| PsuI | RGATCY | 1 cut(s) | 101 |
| SaqAI | TTAA | 1 cut(s) | 170 |
| Sau3AI | GATC | 4 cut(s) | 64, 101, 151, 271 |
| SchI | GAGTC | 1 cut(s) | 279 |
| SetI | ASST | 4 cut(s) | 33, 90, 96, 207 |
| SfaNI | GCATC | 2 cut(s) | 202, 253 |
| Sse9I | AATT | 4 cut(s) | 44, 115, 126, 187 |
| SspMI | CTAG | 2 cut(s) | 105, 290 |
| TaiI | ACGT | 1 cut(s) | 96 |
| TaqI | TCGA | 2 cut(s) | 124, 277 |
| TasI | AATT | 4 cut(s) | 44, 115, 126, 187 |
| Tru1I | TTAA | 1 cut(s) | 170 |
| Tru9I | TTAA | 1 cut(s) | 170 |
| TspGWI | ACGGA | 1 cut(s) | 12 |
| XapI | RAATTY | 3 cut(s) | 44, 115, 187 |
| XbaI | TCTAGA | 1 cut(s) | 104 |
| XmnI | GAANNNNTTC | 1 cut(s) | 18 |
| XspI | CTAG | 2 cut(s) | 105, 290 |