Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0008572

Physical Location & Seq

Genomic Coordinates Reverse (-)

21658782 .. 21663628

Gene Structure 4847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGGGGAACCTCTTGTCACTTTTCAAGAGCAAGCAGAACAGCCATCGGGTTTCTAGAGGTATCTCCGGTGGCACCGCCGGCAGCAACCACGGCGTCACTGGTAGAACGCCGTCGTATGATCCCGGGATGTTCAGGAAACCGAACATAAATGATACGAGTGCTAGCAAAGCAAAGAGTGGTACGGAGAAGCATAAGTACGCTTATATCCCTGATAACTTCACATCCCTTCAACAGGTTACAGATGCCTTGAGAAAAGAAGGCTTAGAGTCATCTAATCTCATCGTCGGAATTGACTTCACCAAGAGCAACGAATGGACAGGCAAAGTTTCATTCAGAAACCGGAGCCTGCACGCCATTGGCGATGAACCTAATCCATATGAGAAGGCTATCTCCATAATTGGGAAAACTTTAGCTCCATTTGATGAAGACAACCTCATTCCTTGTTTCGGCTTTGGTGATGCTACCACTCATGATCAAGAGGTGTTTAGCTTTCACAATGATCATTCGCCCTGCCATGGTTTCGAAGAAGTCTTGGCCTGCTACAAAAGAATAGTTCCAAATTTGCGACTTTCGGGGCCAACATCTTATGGACCTGTAGTTGAAGCTGCAATGGATATTGTGGAGAAAAGTGGAGGGCAATACCATGTTTTAGTTATCATTGCAGATGGCCAGGTCACCAGAAGTATCGATACTAGCGACAATGAATTGAGTCCACAGGAGCAGAAGACGATCGGATCAATTGCAGATGCAAGTTTCTATCCGCTCTCGATTGTTCTTGTTGGAGTCGGGGATGGTCCTTGGGAAGACATGAGGAAGTTCGATGACAAGCTCCCTTCACGCGAATTTGATAATTTTCAGTTCGTTAACTTTACCGAAATTATGTCTAAACACACAACTTCATCCGAGAAAGAAAGTGCATTTGCTCTGGCTGCCCTCATGGAAATCCCAATCCAGTATAAGGCTGCTGTTGAATTCGGTATACTTGGACGTACGACAGGGAAAAAGAAGAAAATCATTCCACGCCCTCCACCAGTTCCTTACACCCATCGTGCACCAACTCGTGAACCAAGTGGTCTTCCAGCGCCTGCAGGGGATGAACGAAGCGAGATGCTCTGTCCAATCTGCCTAACTAATGGAAAGGACATTGCCTTTGGTTGCGGACACATGTCGTGCAGAGACTGTGCACCGAGATTGTCCGACTGTCCAATTTGCCGCCAGCCAATTCGCAGCCGTCTCAGGGTTTTCACCGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009308 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009690 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009850 GO:0009867 GO:0009987 GO:0010033 GO:0010817 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023052 GO:0032446 GO:0032870 GO:0034754 GO:0036211 GO:0042221 GO:0042445 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0065008 GO:0070647 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0080148 GO:0098542 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Copine zf-C3HC4_3

Protein Analysis

418

Amino Acids

45.75

Weight (kDa)

6.86

Isoelectric Point (pI)

39.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Copine	PF07002	115 - 327	1.1e-71	Copine
zf-C3HC4_3	PF13920	369 - 410	4.8e-10	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79380
fragaria_vesca	FvH4_3g13940 FvH4_3g13940 FvH4_3g13940 FvH4_3g13940
malus_domestica	MD05G1239600.v1.1 MD10G1217900.v1.1
prunus_persica	Prupe.4G126200_v2.0.a1 Prupe.4G126200_v2.0.a1
pyrus_communis	pycom05g21590 pycom10g18370
rosa_chinensis	RchiOBHm_Chr5g0023161
rosa_laevigata	RLG00000032704
rosa_multiflora	Rmu_sc0007300.1_g000015
rosa_roxburghii	Rroxscaffold_1G00056180
rosa_rugosa	Rorug05G0077700 Rorug05G0077700 Rorug05G0077700
rosa_samantha	Rh5AG163800 Rh5BG163100 Rh5CG178100 Rh5DG164500
rosa_wichuraiana	Rw5G014780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	71
AccBSI	CCGCTC	1 cut(s)	763
AccI	GTMKAC	1 cut(s)	979
AccII	CGCG	1 cut(s)	840
AciI	CCGC	4 cut(s)	75, 761, 1158, 1213
AclWI	GGATC	2 cut(s)	113, 742
AcoI	YGGCCR	1 cut(s)	667
AcsI	RAATTY	3 cut(s)	559, 842, 971
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	3 cut(s)	181, 197, 991
AfiI	CCNNNNNNNGG	6 cut(s)	232, 399, 446, 515, 958, 1237
AflIII	ACRYGT	1 cut(s)	1164
AgsI	TTSAA	4 cut(s)	25, 230, 602, 971
AjnI	CCWGG	1 cut(s)	669
AluBI	AGCT	4 cut(s)	413, 489, 605, 829
AluI	AGCT	4 cut(s)	413, 489, 605, 829
Alw21I	GWGCWC	2 cut(s)	1054, 1186
Alw26I	GTCTC	2 cut(s)	1170, 1238
Alw44I	GTGCAC	2 cut(s)	1050, 1182
AlwI	GGATC	2 cut(s)	113, 742
AlwNI	CAGNNNCTG	2 cut(s)	1085, 1179
Ama87I	CYCGRG	1 cut(s)	122
AoxI	GGCC	3 cut(s)	534, 575, 667
ApaLI	GTGCAC	2 cut(s)	1050, 1182
ApeKI	GCWGC	5 cut(s)	81, 605, 929, 962, 1227
ApoI	RAATTY	3 cut(s)	559, 842, 971
ArsI	GACNNNNNNTTYG	2 cut(s)	1133, 1165
AspLEI	GCGC	1 cut(s)	1084
AspS9I	GGNCC	3 cut(s)	575, 590, 794
AsuC2I	CCSGG	2 cut(s)	123, 124
AsuHPI	GGTGA	4 cut(s)	289, 467, 667, 1237
AsuII	TTCGAA	1 cut(s)	522
AsuNHI	GCTAGC	1 cut(s)	161
AvaI	CYCGRG	1 cut(s)	122
AvaII	GGWCC	2 cut(s)	590, 794
BaeGI	GKGCMC	2 cut(s)	1054, 1186
BalI	TGGCCA	1 cut(s)	669
BanI	GGYRCC	1 cut(s)	71
BarI	GAAGNNNNNNTAC	4 cut(s)	179, 211, 673, 705
BauI	CACGAG	1 cut(s)	1059
BbsI	GAAGAC	4 cut(s)	432, 731, 810, 1067
Bbv12I	GWGCWC	2 cut(s)	1054, 1186
BbvI	GCAGC	5 cut(s)	93, 592, 916, 949, 1239
BccI	CCATC	4 cut(s)	51, 659, 785, 1053
BceAI	ACGGC	3 cut(s)	94, 106, 1215
BciT130I	CCWGG	1 cut(s)	671
BclI	TGATCA	2 cut(s)	472, 499
BcnI	CCSGG	2 cut(s)	123, 124
BcoDI	GTCTC	2 cut(s)	1170, 1238
BfaI	CTAG	3 cut(s)	54, 162, 693
BfmI	CTRYAG	2 cut(s)	594, 1086
BfoI	RGCGCY	1 cut(s)	1085
BisI	GCNGC	6 cut(s)	82, 606, 930, 963, 1213, 1228
BlsI	GCNGC	6 cut(s)	83, 607, 931, 964, 1214, 1229
Bme1390I	CCNGG	3 cut(s)	123, 124, 671
Bme18I	GGWCC	2 cut(s)	590, 794
BmeT110I	CYCGRG	1 cut(s)	122
BmgT120I	GGNCC	3 cut(s)	575, 590, 794
BmiI	GGNNCC	4 cut(s)	8, 73, 344, 576
BmrFI	CCNGG	3 cut(s)	123, 124, 671
BmsI	GCATC	4 cut(s)	232, 448, 736, 1098
BmtI	GCTAGC	1 cut(s)	165
BoxI	GACNNNNGTC	1 cut(s)	1165
BpiI	GAAGAC	4 cut(s)	432, 731, 810, 1067
Bpu14I	TTCGAA	1 cut(s)	522
BpuEI	CTTGAG	1 cut(s)	268
BpuMI	CCSGG	2 cut(s)	123, 124
Bsa29I	ATCGAT	1 cut(s)	687
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	4 cut(s)	88, 122, 514, 797
BsaWI	WCCGGW	3 cut(s)	65, 339, 1247
BsaXI	ACNNNNNCTCC	2 cut(s)	397, 427
Bsc4I	CCNNNNNNNGG	6 cut(s)	232, 399, 446, 515, 958, 1237
Bse118I	RCCGGY	1 cut(s)	77
Bse1I	ACTGG	3 cut(s)	103, 952, 1031
Bse3DI	GCAATG	3 cut(s)	615, 657, 1143
BseBI	CCWGG	1 cut(s)	671
BseCI	ATCGAT	1 cut(s)	687
BseDI	CCNNGG	4 cut(s)	88, 122, 514, 797
BseGI	GGATG	5 cut(s)	132, 221, 796, 899, 1099
BseLI	CCNNNNNNNGG	6 cut(s)	232, 399, 446, 515, 958, 1237
BseMI	GCAATG	3 cut(s)	615, 657, 1143
BseMII	CTCAG	1 cut(s)	1249
BseNI	ACTGG	3 cut(s)	103, 952, 1031
BseSI	GKGCMC	2 cut(s)	1054, 1186
BseXI	GCAGC	5 cut(s)	93, 592, 916, 949, 1239
BsgI	GTGCAG	2 cut(s)	332, 1192
Bsh1236I	CGCG	1 cut(s)	840
Bsh1285I	CGRYCG	1 cut(s)	732
BshFI	GGCC	3 cut(s)	536, 577, 669
BshNI	GGYRCC	1 cut(s)	71
BshVI	ATCGAT	1 cut(s)	687
BsiEI	CGRYCG	1 cut(s)	732
BsiHKAI	GWGCWC	2 cut(s)	1054, 1186
BsiHKCI	CYCGRG	1 cut(s)	122
BsiSI	CCGG	5 cut(s)	66, 78, 123, 340, 1248
BsiWI	CGTACG	1 cut(s)	989
BslI	CCNNNNNNNGG	6 cut(s)	232, 399, 446, 515, 958, 1237
BsmAI	GTCTC	2 cut(s)	1170, 1238
BsmBI	CGTCTC	1 cut(s)	1238
BsnI	GGCC	3 cut(s)	536, 577, 669
BsoBI	CYCGRG	1 cut(s)	122
Bsp119I	TTCGAA	1 cut(s)	522
Bsp1286I	GDGCHC	2 cut(s)	1054, 1186
Bsp143I	GATC	5 cut(s)	118, 472, 499, 729, 734
Bsp19I	CCATGG	1 cut(s)	514
BspACI	CCGC	4 cut(s)	75, 761, 1158, 1213
BspANI	GGCC	3 cut(s)	536, 577, 669
BspCNI	CTCAG	1 cut(s)	1248
BspDI	ATCGAT	1 cut(s)	687
BspFNI	CGCG	1 cut(s)	840
BspHI	TCATGA	1 cut(s)	469
BspLI	GGNNCC	4 cut(s)	8, 73, 344, 576
BspMAI	CTGCAG	1 cut(s)	1090
BspOI	GCTAGC	1 cut(s)	165
BspPI	GGATC	2 cut(s)	113, 742
BspT104I	TTCGAA	1 cut(s)	522
BspT107I	GGYRCC	1 cut(s)	71
BsrBI	CCGCTC	1 cut(s)	763
BsrDI	GCAATG	3 cut(s)	615, 657, 1143
BsrFI	RCCGGY	1 cut(s)	77
BsrI	ACTGG	3 cut(s)	103, 952, 1031
BssAI	RCCGGY	1 cut(s)	77
BssECI	CCNNGG	4 cut(s)	88, 122, 514, 797
BssMI	GATC	5 cut(s)	118, 472, 499, 729, 734
BssNAI	GTATAC	1 cut(s)	980
BssNI	GRCGYC	1 cut(s)	93
BssSI	CACGAG	1 cut(s)	1059
BssT1I	CCWWGG	2 cut(s)	514, 797
Bst1107I	GTATAC	1 cut(s)	980
Bst2BI	CACGAG	1 cut(s)	1059
Bst2UI	CCWGG	1 cut(s)	671
Bst4CI	ACNGT	2 cut(s)	1181, 1202
BstACI	GRCGYC	1 cut(s)	93
BstBI	TTCGAA	1 cut(s)	522
BstC8I	GCNNGC	8 cut(s)	32, 79, 163, 347, 351, 538, 1086, 1217
BstDEI	CTNAG	2 cut(s)	262, 1235
BstDSI	CCRYGG	2 cut(s)	88, 514
BstEII	GGTNACC	1 cut(s)	673
BstENI	CCTNNNNNAGG	1 cut(s)	230
BstF5I	GGATG	5 cut(s)	132, 221, 796, 899, 1099
BstFNI	CGCG	1 cut(s)	840
BstH2I	RGCGCY	1 cut(s)	1085
BstHHI	GCGC	1 cut(s)	1084
BstKTI	GATC	5 cut(s)	121, 475, 502, 732, 737
BstMAI	GTCTC	2 cut(s)	1170, 1238
BstMBI	GATC	5 cut(s)	118, 472, 499, 729, 734
BstMCI	CGRYCG	1 cut(s)	732
BstMWI	GCNNNNNNNGC	4 cut(s)	78, 90, 167, 929
BstNI	CCWGG	1 cut(s)	671
BstNSI	RCATGY	1 cut(s)	1168
BstPAI	GACNNNNGTC	1 cut(s)	1165
BstPI	GGTNACC	1 cut(s)	673
BstSCI	CCNGG	3 cut(s)	121, 122, 669
BstSFI	CTRYAG	2 cut(s)	594, 1086
BstSLI	GKGCMC	2 cut(s)	1054, 1186
BstUI	CGCG	1 cut(s)	840
BstV1I	GCAGC	5 cut(s)	93, 592, 916, 949, 1239
BstV2I	GAAGAC	4 cut(s)	432, 731, 810, 1067
BstZ17I	GTATAC	1 cut(s)	980
Bsu15I	ATCGAT	1 cut(s)	687
BsuRI	GGCC	3 cut(s)	536, 577, 669
BsuTUI	ATCGAT	1 cut(s)	687
BtgI	CCRYGG	2 cut(s)	88, 514
BtgZI	GCGATG	1 cut(s)	375
BtsCI	GGATG	5 cut(s)	132, 221, 796, 899, 1099
BtsIMutI	CAGTG	1 cut(s)	96
Cac8I	GCNNGC	8 cut(s)	32, 79, 163, 347, 351, 538, 1086, 1217
CaiI	CAGNNNCTG	2 cut(s)	1085, 1179
CciI	TCATGA	1 cut(s)	469
CfoI	GCGC	1 cut(s)	1084
Cfr10I	RCCGGY	1 cut(s)	77
Cfr13I	GGNCC	3 cut(s)	575, 590, 794
Cfr9I	CCCGGG	1 cut(s)	122
ClaI	ATCGAT	1 cut(s)	687
CseI	GACGC	1 cut(s)	82
Csp6I	GTAC	3 cut(s)	180, 196, 990
CviAII	CATG	6 cut(s)	470, 515, 644, 808, 937, 1165
CviQI	GTAC	3 cut(s)	180, 196, 990
DdeI	CTNAG	2 cut(s)	262, 1235
DpnI	GATC	5 cut(s)	120, 474, 501, 731, 736
DpnII	GATC	5 cut(s)	118, 472, 499, 729, 734
EaeI	YGGCCR	1 cut(s)	667
Eco130I	CCWWGG	2 cut(s)	514, 797
Eco47I	GGWCC	2 cut(s)	590, 794
Eco88I	CYCGRG	1 cut(s)	122
Eco91I	GGTNACC	1 cut(s)	673
EcoNI	CCTNNNNNAGG	1 cut(s)	230
EcoO65I	GGTNACC	1 cut(s)	673
EcoRI	GAATTC	1 cut(s)	971
EcoRII	CCWGG	1 cut(s)	669
EcoT14I	CCWWGG	2 cut(s)	514, 797
ErhI	CCWWGG	2 cut(s)	514, 797
Esp3I	CGTCTC	1 cut(s)	1238
FaeI	CATG	6 cut(s)	473, 518, 647, 811, 940, 1168
FatI	CATG	6 cut(s)	469, 514, 643, 807, 936, 1164
FauNDI	CATATG	1 cut(s)	376
FbaI	TGATCA	2 cut(s)	472, 499
FblI	GTMKAC	1 cut(s)	979
Fnu4HI	GCNGC	6 cut(s)	82, 606, 930, 963, 1213, 1228
FokI	GGATG	5 cut(s)	139, 208, 803, 886, 1106
Fsp4HI	GCNGC	6 cut(s)	82, 606, 930, 963, 1213, 1228
FspBI	CTAG	3 cut(s)	54, 162, 693
GlaI	GCGC	1 cut(s)	1083
GluI	GCNGC	6 cut(s)	82, 606, 930, 963, 1213, 1228
HaeII	RGCGCY	1 cut(s)	1085
HaeIII	GGCC	3 cut(s)	536, 577, 669
HapII	CCGG	5 cut(s)	66, 78, 123, 340, 1248
HgaI	GACGC	1 cut(s)	82
HhaI	GCGC	1 cut(s)	1084
Hin1I	GRCGYC	1 cut(s)	93
Hin1II	CATG	6 cut(s)	473, 518, 647, 811, 940, 1168
Hin6I	GCGC	1 cut(s)	1082
HinP1I	GCGC	1 cut(s)	1082
HincII	GTYRAC	1 cut(s)	865
HindII	GTYRAC	1 cut(s)	865
HinfI	GANTC	3 cut(s)	266, 709, 783
HpaI	GTTAAC	1 cut(s)	865
HpaII	CCGG	5 cut(s)	66, 78, 123, 340, 1248
HphI	GGTGA	4 cut(s)	289, 467, 667, 1237
Hpy166II	GTNNAC	6 cut(s)	713, 865, 980, 1052, 1064, 1184
Hpy188I	TCNGA	5 cut(s)	287, 335, 734, 904, 1198
Hpy188III	TCNNGA	7 cut(s)	25, 54, 133, 470, 476, 766, 1061
Hpy8I	GTNNAC	6 cut(s)	713, 865, 980, 1052, 1064, 1184
Hpy99I	CGWCG	2 cut(s)	115, 287
HpyAV	CCTTC	4 cut(s)	236, 251, 376, 843
HpyCH4III	ACNGT	2 cut(s)	1181, 1202
HpyCH4IV	ACGT	1 cut(s)	988
HpyF10VI	GCNNNNNNNGC	4 cut(s)	78, 90, 167, 929
HpyF3I	CTNAG	2 cut(s)	262, 1235
HpySE526I	ACGT	1 cut(s)	988
Hsp92I	GRCGYC	1 cut(s)	93
Hsp92II	CATG	6 cut(s)	473, 518, 647, 811, 940, 1168
HspAI	GCGC	1 cut(s)	1082
KroI	GCCGGC	1 cut(s)	77
KroNI	GCCGGC	1 cut(s)	79
Ksp22I	TGATCA	2 cut(s)	472, 499
KspAI	GTTAAC	1 cut(s)	865
Kzo9I	GATC	5 cut(s)	118, 472, 499, 729, 734
LmnI	GCTCC	4 cut(s)	342, 418, 718, 834
Lsp1109I	GCAGC	5 cut(s)	93, 592, 916, 949, 1239
LweI	GCATC	4 cut(s)	232, 448, 736, 1098
MaeI	CTAG	3 cut(s)	54, 162, 693
MaeII	ACGT	1 cut(s)	988
MaeIII	GTNAC	4 cut(s)	15, 94, 235, 673
MalI	GATC	5 cut(s)	120, 474, 501, 731, 736
MbiI	CCGCTC	1 cut(s)	763
MboI	GATC	5 cut(s)	118, 472, 499, 729, 734
MboII	GAAGA	6 cut(s)	437, 536, 736, 815, 1018, 1067
MfeI	CAATTG	1 cut(s)	738
MhlI	GDGCHC	2 cut(s)	1054, 1186
MlsI	TGGCCA	1 cut(s)	669
MluNI	TGGCCA	1 cut(s)	669
MlyI	GAGTC	3 cut(s)	275, 718, 792
MmeI	TCCRAC	3 cut(s)	265, 760, 1221
MnlI	CCTC	8 cut(s)	20, 50, 443, 472, 626, 804, 944, 1035
Mox20I	TGGCCA	1 cut(s)	669
MroNI	GCCGGC	1 cut(s)	77
MscI	TGGCCA	1 cut(s)	669
MseI	TTAA	1 cut(s)	864
Msp20I	TGGCCA	1 cut(s)	669
MspI	CCGG	5 cut(s)	66, 78, 123, 340, 1248
MspR9I	CCNGG	3 cut(s)	123, 124, 671
MunI	CAATTG	1 cut(s)	738
MvaI	CCWGG	1 cut(s)	671
MvnI	CGCG	1 cut(s)	840
MwoI	GCNNNNNNNGC	4 cut(s)	78, 90, 167, 929
NaeI	GCCGGC	1 cut(s)	79
NciI	CCSGG	2 cut(s)	123, 124
NcoI	CCATGG	1 cut(s)	514
NdeI	CATATG	1 cut(s)	376
NdeII	GATC	5 cut(s)	118, 472, 499, 729, 734
NgoMIV	GCCGGC	1 cut(s)	77
NheI	GCTAGC	1 cut(s)	161
NlaIII	CATG	6 cut(s)	473, 518, 647, 811, 940, 1168
NlaIV	GGNNCC	4 cut(s)	8, 73, 344, 576
NmuCI	GTSAC	3 cut(s)	15, 94, 673
NspI	RCATGY	1 cut(s)	1168
NspV	TTCGAA	1 cut(s)	522
PagI	TCATGA	1 cut(s)	469
PciI	ACATGT	1 cut(s)	1164
PcsI	WCGNNNNNNNCGW	2 cut(s)	357, 693
PdiI	GCCGGC	1 cut(s)	79
Pfl23II	CGTACG	1 cut(s)	989
PkrI	GCNGC	6 cut(s)	83, 607, 931, 964, 1214, 1229
Ple19I	CGATCG	1 cut(s)	732
PleI	GAGTC	3 cut(s)	274, 717, 791
PpsI	GAGTC	3 cut(s)	274, 717, 791
PscI	ACATGT	1 cut(s)	1164
PshAI	GACNNNNGTC	1 cut(s)	1165
Psp6I	CCWGG	1 cut(s)	669
PspEI	GGTNACC	1 cut(s)	673
PspGI	CCWGG	1 cut(s)	669
PspLI	CGTACG	1 cut(s)	989
PspN4I	GGNNCC	4 cut(s)	8, 73, 344, 576
PspPI	GGNCC	3 cut(s)	575, 590, 794
PstI	CTGCAG	1 cut(s)	1090
PstNI	CAGNNNCTG	2 cut(s)	1085, 1179
PvuI	CGATCG	1 cut(s)	732
RsaI	GTAC	3 cut(s)	181, 197, 991
RsaNI	GTAC	3 cut(s)	180, 196, 990
SaqAI	TTAA	1 cut(s)	864
SatI	GCNGC	6 cut(s)	82, 606, 930, 963, 1213, 1228
Sau3AI	GATC	5 cut(s)	118, 472, 499, 729, 734
Sau96I	GGNCC	3 cut(s)	575, 590, 794
SbfI	CCTGCAGG	1 cut(s)	1090
SchI	GAGTC	3 cut(s)	275, 718, 792
ScrFI	CCNGG	3 cut(s)	123, 124, 671
SdaI	CCTGCAGG	1 cut(s)	1090
SduI	GDGCHC	2 cut(s)	1054, 1186
SfaNI	GCATC	4 cut(s)	232, 448, 736, 1098
SfcI	CTRYAG	2 cut(s)	594, 1086
SfuI	TTCGAA	1 cut(s)	522
SinI	GGWCC	2 cut(s)	590, 794
SmaI	CCCGGG	1 cut(s)	124
SmlI	CTYRAG	1 cut(s)	247
SmoI	CTYRAG	1 cut(s)	247
Sse8387I	CCTGCAGG	1 cut(s)	1090
SsiI	CCGC	4 cut(s)	75, 761, 1158, 1213
SspMI	CTAG	3 cut(s)	54, 162, 693
StyD4I	CCNGG	3 cut(s)	121, 122, 669
StyI	CCWWGG	2 cut(s)	514, 797
TaaI	ACNGT	2 cut(s)	1181, 1202
TaiI	ACGT	1 cut(s)	991
TaqI	TCGA	4 cut(s)	522, 687, 767, 819
TauI	GCSGC	1 cut(s)	1215
Tru1I	TTAA	1 cut(s)	864
Tru9I	TTAA	1 cut(s)	864
TscAI	CASTG	1 cut(s)	103
TseFI	GTSAC	3 cut(s)	15, 94, 673
TseI	GCWGC	5 cut(s)	81, 605, 929, 962, 1227
Tsp45I	GTSAC	3 cut(s)	15, 94, 673
TspDTI	ATGAA	6 cut(s)	318, 378, 438, 717, 888, 1110
TspGWI	ACGGA	1 cut(s)	197
TspMI	CCCGGG	1 cut(s)	122
TspRI	CASTG	1 cut(s)	103
VneI	GTGCAC	2 cut(s)	1050, 1182
VpaK11BI	GGWCC	2 cut(s)	590, 794
XagI	CCTNNNNNAGG	1 cut(s)	230
XapI	RAATTY	3 cut(s)	559, 842, 971
XbaI	TCTAGA	1 cut(s)	53
XceI	RCATGY	1 cut(s)	1168
XcmI	CCANNNNNNNNNTGG	1 cut(s)	95
XmaI	CCCGGG	1 cut(s)	122
XmiI	GTMKAC	1 cut(s)	979
XspI	CTAG	3 cut(s)	54, 162, 693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.