Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0012589

Physical Location & Seq

Genomic Coordinates Forward (+)

26074572 .. 26082179

Gene Structure 7608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3039 bp

ATGTCGACGATATCGTCACGATTTCTCCCCATCAATGACCAACCGAAGCTCGCATTCTCATCTTCCACCTCTCCGCTCCCTCCGTTTCCCCAACATTCTCGAACCTCCTCGAGACCACGGCGATCTTCGGTTCCCTACACCCGCACTCGTGTCGCAAAATCGATACGCGCCTCCGCCGCCCAACCGCCCTCCGCCACGTCGTCTGTCACGCTCGAAATCCCAGAGACCGAATCCGACCCGTCCGCCACCGTCTTCGTGATCCGGGCCCGGAACCGCATCGGCCTCCTCCAGGTCATCACCCGCGTCTTCAAAGTCCTCGGCCTCCACGTCGACAAGGCCACCGTCGAATTCGAGGGTGAATACTTCGTAAAGCGGTTCTTCGTCACCGATTCCCGCGGCGCGAAGATCAGCGACCCGGAGAGCCTCGAGCGGATCAAGAATGCCCTGGCGGAGGCCATTGAGGACGGCGGTTCGGTCTCGGTTGGTCCCACCAGTCCCACCACGAGGGGCGTCGTAGTCCGCCGTCCAGGTTCGGGTCTAGGCCTGACATTTGGCTCGGACGGCGCCAAGGCCGAGAGGATGTTCGCGCTAATGGATGGGTTCTTGAAAAATGACTCAATTAGCCTTCAGAAGGACATTCTTCGTCACGTTGAGTATACGGTGGCCAGGTCCCGCTTCAGCTTCGATGACTTTGAGGCTTATCAGGCTCTAGCGCATAGTGTGAGAGACCGGCTGATCGAGCGTTCGCATGATACTCAACTTTACTTCAAGAGGAAAGACCCTAAGCGCGTATACTTCCTATCGCTTGAGTTTCTTATGGGTCGTTCCTTGTCGAATAGTGTCATCAACCTTGGCATTCGGGACCAATATGCAGATGCTTTAAGCCAGCTTGGCTTTGAGTTTGAAGTTTTGGCAGAGCAGGAAGGAGATGCTGCCCTTGGTAATGGTGGCTTAGCCCGTCTTTCAGCTTGTCAAATGGATTCTATGGCAACTCTGGACTATCCTGCATGGGGTTATGGACTACGTTACGAATATGGATTATTCCGCCAGGTCATACTAGATGGCTTCCAACATGAACAACCTGATTTCTGGTTAAACTTTGGAAATCCTTGGGAGACAGAGCGGGTTCATGTAACGTATCCAGTAAAGTTCTACGGGGTCGTCGAGGAGGAAAATCTGAATGGAGAAAAACGTAATATTTGGTCCCCTGGAGAAGTGGTAGAAGCTGTGGCTTATGATAATCCTATACCTGGTTATGGAACAAGGAATACCATTACTCTCCGTTTATGGGCTGGAAAGCCAAGTGATCAACATGATATGGAAGCTTATAATACTGGAGATTACATCAATGCTGTTGTTAGTAGACAGAAAGCAGAAAATATAAGTAGTGTTTTGTACCCTGATGACCGTTCTTTTCAGGGGAAGGAACTGCGGTTGAAACAACAATATTTCTTTGTCTCTGCATCCATACAAGACATTATTCGGAGGTTTAAAGATGGTCACAGTAACTTTGATGAATTTCCAGAAAAGGTTGCTCTGCAGCTGAATGATACTCACCCATCTCTTGCAATAGCTGAGGTTATGAGAGTGCTTGTTGATGAAGAGAATTTGGGTTGGAATAAAGCATGGGACATTGCTTGCAAAATCTTTTCGTTCACAATACATGCAGTAATTGCTGAAGGGTTGGAGAAAATCCCTGTTGATTTACTGGGCAGTCTTCTCCCACGTCATTTACAAATTATATATGACATAAACTTTAAGTTTGTGGAAGAGTTGAAGAAGAGGATTGGTTTAGATTACAATCGGCTGTCCCGGATGTCAATTGTTGAGGAAGGTTCTACAAAGAGTATCCGAATGGCAAATCTGGCAATTGTATGCTCCCATACTGTGAATGGTGTTTCCAATGTACATTCAGAATTATTAAAAACAAAGTTATTCAAGGACTTTTATGAGTTGTGGCCTGAGAAATTTCAGTGCAAGACTAATGGTGTTACCCAGCGTCGCTGGATTGTAGTGAGTAACCCTAGCCTGTGTGCTCTTATCTCAAAATGGCTTGGAACAGAAGCTTGGATTCGTGATGTTGACCTTCTAACTGGCTTGCGTGAGTATGCAGCAGATGCCGACCTTCAACAAGAATGGATGATGGTTAAGAAGGTTAACAAAATGAGGCTTGCTGAGTACATTGAAGCAATGAGTGGTGTGAAGGTTAGTTTAGATGCAATGTTTGATGTGCAGACAAAGCGAATACACGAGTACAAACGACAGTTGCTGAATATACTTGGCATTATCCATCGATATGATTGTATCAAGAACATGGAGAAAAGTCAACGGAATAAGGTTGTGCCCCGTGTTTGTATTATTGGAGGAAAAGCTGCTCCTGGTTATGAAATTGCAAAGAAGATTATCAAACTTTGTCATGCTGTAGCAGAAAAAATAAATAATGATGATGATGTTGGCGATCTGTTAAAACTGGTTTTCATTCCTGATTATAATGTATCTGTTGCTGAATTGGTAATACCCGGGGCTGACCTTTCACAGCACCTAAGCACCGCAGGACATGAAGCGTCTGGAACTGGAAGCATGAAGTTTCTTATGAATGGATGTTTACTCTTAGCTACAGAAGATGGCTCTACAGTTGAAATTGTTGAAGAAATAGGGGCAGACAACCTGTTTTTGTTTGGTGCAAAGATTGATGAAGTTCCCAAATTGCGAGAGGAAGGATCTGCTCATAAAATGCCACTGCAATGTGCACGCGTTCTCAGGATGGTCCGAGATGGTCATTTCGGCTTTAAAGACTATTTCGAATCTCTATGTGACAAGGTGGAGGGCAACGACTTCTATTTGCTTGGATCTGATTTCGAAAGCTATTTAGAGGCACAGGCCGCTGCTGATAAAGCATTTGCGGATCCACAGAAGTGGACTCAGATGAGCATCCTTAGCACAGCCGGGTCTGGGAGATTCAGCAGCGATAGAACAATCCGAGACTACGCGGAGAAGACTTGGGGAGTTGAACCGTGCAGATTCCCTTCCGACGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0014074 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044464 GO:0046683 GO:0048037 GO:0050662 GO:0050896 GO:0051591 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

1013

Amino Acids

113.88

Weight (kDa)

6.1

Isoelectric Point (pI)

40.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	294 - 1003	1.5e-301	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012589)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650
malus_domestica	MD10G1289300.v1.1
prunus_persica	Prupe.4G052400_v2.0.a1
pyrus_communis	pycom10g24190
rosa_chinensis	RchiOBHm_Chr5g0009141
rosa_laevigata	RLG00000031633
rosa_multiflora	Rmu_sc0005923.1_g000005
rosa_roxburghii	Rroxscaffold_1G00066860 Rroxscaffold_1G00067560
rosa_rugosa	Rorug04G0441500
rosa_samantha	Rh5AG070800 Rh5BG067700 Rh5CG079600 Rh5DG067400
rosa_wichuraiana	Rw5G006620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1329, 2490
AasI	GACNNNNNNGTC	1 cut(s)	13
AccB1I	GGYRCC	1 cut(s)	563
AccBSI	CCGCTC	3 cut(s)	76, 430, 1123
AccI	GTMKAC	5 cut(s)	5, 330, 656, 792, 1363
AccII	CGCG	8 cut(s)	168, 303, 396, 401, 587, 789, 2754, 2990
AclWI	GGATC	6 cut(s)	253, 440, 2728, 2857, 2900, 2913
AcoI	YGGCCR	1 cut(s)	663
AcsI	RAATTY	4 cut(s)	347, 1517, 1606, 1967
AcuI	CTGAAG	3 cut(s)	611, 661, 1698
AcyI	GRCGYC	2 cut(s)	510, 564
AfaI	GTAC	4 cut(s)	1397, 1908, 2180, 2255
AflIII	ACRYGT	1 cut(s)	2752
AjiI	CACGTC	3 cut(s)	198, 328, 1727
AjnI	CCWGG	8 cut(s)	288, 444, 526, 665, 1047, 1207, 1249, 2377
AjuI	GAANNNNNNNTTGG	2 cut(s)	2050, 2082
AleI	CACNNNNGTG	1 cut(s)	2914
Alw21I	GWGCWC	2 cut(s)	2038, 2752
Alw26I	GTCTC	7 cut(s)	106, 218, 481, 720, 1109, 1462, 2976
Alw44I	GTGCAC	1 cut(s)	2748
AlwI	GGATC	6 cut(s)	253, 440, 2728, 2857, 2900, 2913
AlwNI	CAGNNNCTG	1 cut(s)	2269
Ama87I	CYCGRG	3 cut(s)	109, 425, 2519
ApaI	GGGCCC	1 cut(s)	268
ApaLI	GTGCAC	1 cut(s)	2748
ApeKI	GCWGC	6 cut(s)	932, 1540, 2111, 2372, 2885, 2964
ApoI	RAATTY	4 cut(s)	347, 1517, 1606, 1967
AspLEI	GCGC	6 cut(s)	170, 401, 566, 589, 715, 789
AspS9I	GGNCC	7 cut(s)	264, 265, 485, 669, 862, 1203, 2767
AsuC2I	CCSGG	7 cut(s)	263, 268, 416, 1813, 2520, 2521, 2947
AsuHPI	GGTGA	4 cut(s)	289, 368, 376, 1547
AsuII	TTCGAA	2 cut(s)	2802, 2859
AvaI	CYCGRG	3 cut(s)	109, 425, 2519
AvaII	GGWCC	5 cut(s)	485, 669, 862, 1203, 2767
BaeGI	GKGCMC	3 cut(s)	268, 2346, 2752
BalI	TGGCCA	1 cut(s)	665
BamHI	GGATCC	1 cut(s)	2905
BanI	GGYRCC	1 cut(s)	563
BanII	GRGCYC	1 cut(s)	268
BauI	CACGAG	3 cut(s)	147, 502, 2249
BbsI	GAAGAC	4 cut(s)	244, 298, 1709, 3002
Bbv12I	GWGCWC	2 cut(s)	2038, 2752
BbvCI	CCTCAGC	1 cut(s)	1575
BbvI	GCAGC	6 cut(s)	919, 1552, 2123, 2359, 2872, 2976
BceAI	ACGGC	4 cut(s)	134, 481, 507, 577
BcgI	CGANNNNNNTGC	2 cut(s)	133, 167
BciT130I	CCWGG	8 cut(s)	290, 446, 528, 667, 1049, 1209, 1251, 2379
BciVI	GTATCC	2 cut(s)	1149, 1859
BclI	TGATCA	1 cut(s)	1306
BcnI	CCSGG	7 cut(s)	263, 268, 416, 1813, 2520, 2521, 2947
BcoDI	GTCTC	7 cut(s)	106, 218, 481, 720, 1109, 1462, 2976
BfaI	CTAG	5 cut(s)	539, 710, 1058, 2025, 3037
BfmI	CTRYAG	4 cut(s)	1538, 2421, 2616, 2631
BfoI	RGCGCY	1 cut(s)	567
BfuI	GTATCC	2 cut(s)	1149, 1859
BglI	GCCNNNNNGGC	1 cut(s)	891
BisI	GCNGC	9 cut(s)	177, 397, 933, 1541, 2112, 2373, 2883, 2886, 2965
BlpI	GCTNAGC	1 cut(s)	952
BlsI	GCNGC	9 cut(s)	178, 398, 934, 1542, 2113, 2374, 2884, 2887, 2966
Bme18I	GGWCC	5 cut(s)	485, 669, 862, 1203, 2767
BmeT110I	CYCGRG	3 cut(s)	109, 425, 2519
BmgBI	CACGTC	3 cut(s)	198, 328, 1727
BmgT120I	GGNCC	7 cut(s)	264, 265, 485, 669, 862, 1203, 2767
BmiI	GGNNCC	9 cut(s)	132, 266, 272, 487, 565, 671, 863, 1205, 2907
BmrI	ACTGGG	1 cut(s)	1718
BmsI	GCATC	7 cut(s)	285, 865, 919, 1472, 2107, 2206, 2940
BmuI	ACTGGG	1 cut(s)	1718
BpiI	GAAGAC	4 cut(s)	244, 298, 1709, 3002
BpmI	CTGGAG	3 cut(s)	272, 1230, 1356
Bpu10I	CCTNAGC	4 cut(s)	783, 1575, 2543, 2936
Bpu1102I	GCTNAGC	1 cut(s)	952
Bpu14I	TTCGAA	2 cut(s)	2802, 2859
BpuEI	CTTGAG	1 cut(s)	827
BpuMI	CCSGG	7 cut(s)	263, 268, 416, 1813, 2520, 2521, 2947
Bsa29I	ATCGAT	2 cut(s)	161, 2293
BsaBI	GATNNNNATC	2 cut(s)	1800, 2930
BsaHI	GRCGYC	2 cut(s)	510, 564
BsaI	GGTCTC	4 cut(s)	106, 218, 481, 720
BsaXI	ACNNNNNCTCC	4 cut(s)	9, 39, 1203, 1233
Bse118I	RCCGGY	1 cut(s)	729
Bse1I	ACTGG	7 cut(s)	492, 1142, 1339, 1713, 2098, 2475, 2578
Bse3DI	GCAATG	4 cut(s)	1632, 2196, 2226, 2750
Bse8I	GATNNNNATC	2 cut(s)	1800, 2930
BseBI	CCWGG	8 cut(s)	290, 446, 528, 667, 1049, 1209, 1251, 2379
BseCI	ATCGAT	2 cut(s)	161, 2293
BseGI	GGATG	8 cut(s)	585, 601, 1463, 1821, 2145, 2606, 2769, 2931
BseJI	GATNNNNATC	2 cut(s)	1800, 2930
BseMI	GCAATG	4 cut(s)	1632, 2196, 2226, 2750
BseMII	CTCAG	5 cut(s)	1566, 1953, 2166, 2773, 2936
BseNI	ACTGG	7 cut(s)	492, 1142, 1339, 1713, 2098, 2475, 2578
BseRI	GAGGAG	3 cut(s)	97, 275, 1181
BseSI	GKGCMC	3 cut(s)	268, 2346, 2752
BseXI	GCAGC	6 cut(s)	919, 1552, 2123, 2359, 2872, 2976
BseYI	CCCAGC	1 cut(s)	1995
BsgI	GTGCAG	2 cut(s)	2252, 3037
Bsh1236I	CGCG	8 cut(s)	168, 303, 396, 401, 587, 789, 2754, 2990
BshNI	GGYRCC	1 cut(s)	563
BshVI	ATCGAT	2 cut(s)	161, 2293
BsiHKAI	GWGCWC	2 cut(s)	2038, 2752
BsiHKCI	CYCGRG	3 cut(s)	109, 425, 2519
BsiSI	CCGG	7 cut(s)	262, 268, 416, 730, 1813, 2520, 2946
BslFI	GGGAC	7 cut(s)	471, 480, 655, 875, 1189, 1643, 1795
BsmAI	GTCTC	7 cut(s)	106, 218, 481, 720, 1109, 1462, 2976
BsmFI	GGGAC	7 cut(s)	471, 480, 655, 875, 1189, 1643, 1795
BsmI	GAATGC	3 cut(s)	53, 445, 855
Bso31I	GGTCTC	4 cut(s)	106, 218, 481, 720
BsoBI	CYCGRG	3 cut(s)	109, 425, 2519
Bsp119I	TTCGAA	2 cut(s)	2802, 2859
Bsp120I	GGGCCC	1 cut(s)	264
Bsp1286I	GDGCHC	4 cut(s)	268, 2038, 2346, 2752
Bsp1407I	TGTACA	1 cut(s)	1906
Bsp1720I	GCTNAGC	1 cut(s)	952
BspCNI	CTCAG	5 cut(s)	1567, 1954, 2167, 2772, 2935
BspDI	ATCGAT	2 cut(s)	161, 2293
BspFNI	CGCG	8 cut(s)	168, 303, 396, 401, 587, 789, 2754, 2990
BspLI	GGNNCC	9 cut(s)	132, 266, 272, 487, 565, 671, 863, 1205, 2907
BspMAI	CTGCAG	1 cut(s)	1542
BspPI	GGATC	6 cut(s)	253, 440, 2728, 2857, 2900, 2913
BspT104I	TTCGAA	2 cut(s)	2802, 2859
BspT107I	GGYRCC	1 cut(s)	563
BspTNI	GGTCTC	4 cut(s)	106, 218, 481, 720
BsrBI	CCGCTC	3 cut(s)	76, 430, 1123
BsrDI	GCAATG	4 cut(s)	1632, 2196, 2226, 2750
BsrFI	RCCGGY	1 cut(s)	729
BsrGI	TGTACA	1 cut(s)	1906
BsrI	ACTGG	7 cut(s)	492, 1142, 1339, 1713, 2098, 2475, 2578
BssAI	RCCGGY	1 cut(s)	729
BssNAI	GTATAC	2 cut(s)	657, 793
BssNI	GRCGYC	2 cut(s)	510, 564
BssSI	CACGAG	3 cut(s)	147, 502, 2249
BssT1I	CCWWGG	4 cut(s)	567, 850, 937, 1109
Bst1107I	GTATAC	2 cut(s)	657, 793
Bst2BI	CACGAG	3 cut(s)	147, 502, 2249
Bst2UI	CCWGG	8 cut(s)	290, 446, 528, 667, 1049, 1209, 1251, 2379
Bst4CI	ACNGT	9 cut(s)	250, 343, 661, 1409, 1505, 1888, 2265, 2635, 3015
Bst6I	CTCTTC	3 cut(s)	1596, 1764, 1775
BstACI	GRCGYC	2 cut(s)	510, 564
BstAPI	GCANNNNNTGC	2 cut(s)	1673, 2117
BstAUI	TGTACA	1 cut(s)	1906
BstBI	TTCGAA	2 cut(s)	2802, 2859
BstC8I	GCNNGC	6 cut(s)	51, 887, 1639, 2099, 2172, 2752
BstDSI	CCRYGG	2 cut(s)	116, 394
BstENI	CCTNNNNNAGG	3 cut(s)	287, 449, 629
BstF5I	GGATG	8 cut(s)	585, 601, 1463, 1821, 2145, 2606, 2769, 2931
BstFNI	CGCG	8 cut(s)	168, 303, 396, 401, 587, 789, 2754, 2990
BstH2I	RGCGCY	1 cut(s)	567
BstHHI	GCGC	6 cut(s)	170, 401, 566, 589, 715, 789
BstMAI	GTCTC	7 cut(s)	106, 218, 481, 720, 1109, 1462, 2976
BstNI	CCWGG	8 cut(s)	290, 446, 528, 667, 1049, 1209, 1251, 2379
BstNSI	RCATGY	1 cut(s)	1667
BstSFI	CTRYAG	4 cut(s)	1538, 2421, 2616, 2631
BstSLI	GKGCMC	3 cut(s)	268, 2346, 2752
BstUI	CGCG	8 cut(s)	168, 303, 396, 401, 587, 789, 2754, 2990
BstV1I	GCAGC	6 cut(s)	919, 1552, 2123, 2359, 2872, 2976
BstV2I	GAAGAC	4 cut(s)	244, 298, 1709, 3002
BstX2I	RGATCY	3 cut(s)	2720, 2849, 2905
BstXI	CCANNNNNNTGG	1 cut(s)	2916
BstYI	RGATCY	3 cut(s)	2720, 2849, 2905
BstZ17I	GTATAC	2 cut(s)	657, 793
Bsu15I	ATCGAT	2 cut(s)	161, 2293
BsuI	GTATCC	2 cut(s)	1149, 1859
BsuTUI	ATCGAT	2 cut(s)	161, 2293
BtgI	CCRYGG	2 cut(s)	116, 394
BtrI	CACGTC	3 cut(s)	198, 328, 1727
BtsCI	GGATG	8 cut(s)	585, 601, 1463, 1821, 2145, 2606, 2769, 2931
BtsI	GCAGTG	1 cut(s)	2738
BtsIMutI	CAGTG	2 cut(s)	1979, 2738
Cac8I	GCNNGC	6 cut(s)	51, 887, 1639, 2099, 2172, 2752
CaiI	CAGNNNCTG	1 cut(s)	2269
CfoI	GCGC	6 cut(s)	170, 401, 566, 589, 715, 789
Cfr10I	RCCGGY	1 cut(s)	729
Cfr13I	GGNCC	7 cut(s)	264, 265, 485, 669, 862, 1203, 2767
Cfr42I	CCGCGG	1 cut(s)	397
Cfr9I	CCCGGG	1 cut(s)	2519
ClaI	ATCGAT	2 cut(s)	161, 2293
CseI	GACGC	4 cut(s)	292, 499, 1988, 2553
CsiI	ACCWGGT	1 cut(s)	1249
Csp6I	GTAC	4 cut(s)	1396, 1907, 2179, 2254
CviQI	GTAC	4 cut(s)	1396, 1907, 2179, 2254
DinI	GGCGCC	1 cut(s)	565
DraI	TTTAAA	2 cut(s)	1492, 2791
DrdI	GACNNNNNNGTC	1 cut(s)	13
DseDI	GACNNNNNNGTC	1 cut(s)	13
EaeI	YGGCCR	1 cut(s)	663
Eam1104I	CTCTTC	3 cut(s)	1596, 1764, 1775
EarI	CTCTTC	3 cut(s)	1596, 1764, 1775
EciI	GGCGGA	6 cut(s)	163, 181, 232, 464, 509, 1034
Eco130I	CCWWGG	4 cut(s)	567, 850, 937, 1109
Eco147I	AGGCCT	1 cut(s)	543
Eco24I	GRGCYC	1 cut(s)	268
Eco31I	GGTCTC	4 cut(s)	106, 218, 481, 720
Eco32I	GATATC	1 cut(s)	12
Eco47I	GGWCC	5 cut(s)	485, 669, 862, 1203, 2767
Eco57I	CTGAAG	3 cut(s)	611, 661, 1698
Eco88I	CYCGRG	3 cut(s)	109, 425, 2519
EcoNI	CCTNNNNNAGG	3 cut(s)	287, 449, 629
EcoO109I	RGGNCCY	1 cut(s)	669
EcoRI	GAATTC	1 cut(s)	347
EcoRII	CCWGG	8 cut(s)	288, 444, 526, 665, 1047, 1207, 1249, 2377
EcoRV	GATATC	1 cut(s)	12
EcoT14I	CCWWGG	4 cut(s)	567, 850, 937, 1109
EcoT38I	GRGCYC	1 cut(s)	268
EgeI	GGCGCC	1 cut(s)	565
EheI	GGCGCC	1 cut(s)	565
ErhI	CCWWGG	4 cut(s)	567, 850, 937, 1109
FalI	AAGNNNNNCTT	2 cut(s)	362, 394
FaqI	GGGAC	7 cut(s)	471, 480, 655, 875, 1189, 1643, 1795
FauI	CCCGC	5 cut(s)	149, 308, 401, 680, 1116
FbaI	TGATCA	1 cut(s)	1306
FblI	GTMKAC	5 cut(s)	5, 330, 656, 792, 1363
Fnu4HI	GCNGC	9 cut(s)	177, 397, 933, 1541, 2112, 2373, 2883, 2886, 2965
FokI	GGATG	8 cut(s)	592, 608, 1450, 1828, 2152, 2613, 2776, 2918
FriOI	GRGCYC	1 cut(s)	268
Fsp4HI	GCNGC	9 cut(s)	177, 397, 933, 1541, 2112, 2373, 2883, 2886, 2965
FspBI	CTAG	5 cut(s)	539, 710, 1058, 2025, 3037
GlaI	GCGC	6 cut(s)	169, 400, 565, 588, 714, 788
GluI	GCNGC	9 cut(s)	177, 397, 933, 1541, 2112, 2373, 2883, 2886, 2965
GsaI	CCCAGC	1 cut(s)	1999
GsuI	CTGGAG	3 cut(s)	272, 1230, 1356
HaeII	RGCGCY	1 cut(s)	567
HapII	CCGG	7 cut(s)	262, 268, 416, 730, 1813, 2520, 2946
HgaI	GACGC	4 cut(s)	292, 499, 1988, 2553
HhaI	GCGC	6 cut(s)	170, 401, 566, 589, 715, 789
Hin1I	GRCGYC	2 cut(s)	510, 564
Hin6I	GCGC	6 cut(s)	168, 399, 564, 587, 713, 787
HinP1I	GCGC	6 cut(s)	168, 399, 564, 587, 713, 787
HincII	GTYRAC	5 cut(s)	6, 331, 2083, 2158, 2327
HindII	GTYRAC	5 cut(s)	6, 331, 2083, 2158, 2327
HindIII	AAGCTT	2 cut(s)	1323, 2064
HinfI	GANTC	9 cut(s)	230, 389, 614, 980, 2071, 2804, 2920, 2958, 3021
HpaI	GTTAAC	1 cut(s)	2158
HpaII	CCGG	7 cut(s)	262, 268, 416, 730, 1813, 2520, 2946
HphI	GGTGA	4 cut(s)	289, 368, 376, 1547
Hpy99I	CGWCG	8 cut(s)	10, 202, 332, 347, 515, 1166, 2004, 3035
HpyCH4III	ACNGT	9 cut(s)	250, 343, 661, 1409, 1505, 1888, 2265, 2635, 3015
HpyCH4IV	ACGT	7 cut(s)	197, 327, 648, 1024, 1136, 1192, 1726
HpySE526I	ACGT	7 cut(s)	197, 327, 648, 1024, 1136, 1192, 1726
Hsp92I	GRCGYC	2 cut(s)	510, 564
HspAI	GCGC	6 cut(s)	168, 399, 564, 587, 713, 787
KasI	GGCGCC	1 cut(s)	563
Ksp22I	TGATCA	1 cut(s)	1306
KspAI	GTTAAC	1 cut(s)	2158
KspI	CCGCGG	1 cut(s)	397
LmnI	GCTCC	3 cut(s)	81, 1883, 2380
Lsp1109I	GCAGC	6 cut(s)	919, 1552, 2123, 2359, 2872, 2976
LweI	GCATC	7 cut(s)	285, 865, 919, 1472, 2107, 2206, 2940
MabI	ACCWGGT	1 cut(s)	1249
MaeI	CTAG	5 cut(s)	539, 710, 1058, 2025, 3037
MaeII	ACGT	7 cut(s)	197, 327, 648, 1024, 1136, 1192, 1726
MbiI	CCGCTC	3 cut(s)	76, 430, 1123
MfeI	CAATTG	2 cut(s)	1821, 1869
MflI	RGATCY	3 cut(s)	2720, 2849, 2905
MhlI	GDGCHC	4 cut(s)	268, 2038, 2346, 2752
MlsI	TGGCCA	1 cut(s)	665
MluI	ACGCGT	1 cut(s)	2752
MluNI	TGGCCA	1 cut(s)	665
Mly113I	GGCGCC	1 cut(s)	564
MlyI	GAGTC	2 cut(s)	608, 2914
MmeI	TCCRAC	4 cut(s)	258, 1093, 1595, 1665
Mox20I	TGGCCA	1 cut(s)	665
MscI	TGGCCA	1 cut(s)	665
MseI	TTAA	9 cut(s)	881, 1094, 1491, 1758, 1922, 2148, 2157, 2465, 2790
MslI	CAYNNNNRTG	3 cut(s)	2295, 2743, 2914
Msp20I	TGGCCA	1 cut(s)	665
MspA1I	CMGCKG	3 cut(s)	396, 1543, 2885
MspI	CCGG	7 cut(s)	262, 268, 416, 730, 1813, 2520, 2946
MunI	CAATTG	2 cut(s)	1821, 1869
Mva1269I	GAATGC	3 cut(s)	53, 445, 855
MvaI	CCWGG	8 cut(s)	290, 446, 528, 667, 1049, 1209, 1251, 2379
MvnI	CGCG	8 cut(s)	168, 303, 396, 401, 587, 789, 2754, 2990
NarI	GGCGCC	1 cut(s)	564
NciI	CCSGG	7 cut(s)	263, 268, 416, 1813, 2520, 2521, 2947
NlaIV	GGNNCC	9 cut(s)	132, 266, 272, 487, 565, 671, 863, 1205, 2907
NmeAIII	GCCGAG	2 cut(s)	297, 598
NmuCI	GTSAC	6 cut(s)	15, 205, 382, 644, 1499, 2813
NspI	RCATGY	1 cut(s)	1667
NspV	TTCGAA	2 cut(s)	2802, 2859
OliI	CACNNNNGTG	1 cut(s)	2914
PaeR7I	CTCGAG	2 cut(s)	109, 425
PceI	AGGCCT	1 cut(s)	543
PcsI	WCGNNNNNNNCGW	3 cut(s)	11, 324, 1161
PctI	GAATGC	3 cut(s)	53, 445, 855
PfeI	GAWTC	7 cut(s)	230, 389, 980, 2071, 2804, 2958, 3021
PfoI	TCCNGGA	1 cut(s)	1811
PkrI	GCNGC	9 cut(s)	178, 398, 934, 1542, 2113, 2374, 2884, 2887, 2966
PleI	GAGTC	2 cut(s)	608, 2914
PluTI	GGCGCC	1 cut(s)	567
PpsI	GAGTC	2 cut(s)	608, 2914
PpuMI	RGGWCCY	1 cut(s)	669
PsiI	TTATAA	2 cut(s)	1329, 2490
Psp5II	RGGWCCY	1 cut(s)	669
Psp6I	CCWGG	8 cut(s)	288, 444, 526, 665, 1047, 1207, 1249, 2377
PspFI	CCCAGC	1 cut(s)	1995
PspGI	CCWGG	8 cut(s)	288, 444, 526, 665, 1047, 1207, 1249, 2377
PspN4I	GGNNCC	9 cut(s)	132, 266, 272, 487, 565, 671, 863, 1205, 2907
PspOMI	GGGCCC	1 cut(s)	264
PspPI	GGNCC	7 cut(s)	264, 265, 485, 669, 862, 1203, 2767
PspPPI	RGGWCCY	1 cut(s)	669
PspXI	VCTCGAGB	1 cut(s)	425
PsrI	GAACNNNNNNTAC	2 cut(s)	1252, 1284
PstI	CTGCAG	1 cut(s)	1542
PstNI	CAGNNNCTG	1 cut(s)	2269
PsuI	RGATCY	3 cut(s)	2720, 2849, 2905
PvuII	CAGCTG	1 cut(s)	1543
RsaI	GTAC	4 cut(s)	1397, 1908, 2180, 2255
RsaNI	GTAC	4 cut(s)	1396, 1907, 2179, 2254
RseI	CAYNNNNRTG	3 cut(s)	2295, 2743, 2914
SacII	CCGCGG	1 cut(s)	397
SalI	GTCGAC	2 cut(s)	4, 329
SaqAI	TTAA	9 cut(s)	881, 1094, 1491, 1758, 1922, 2148, 2157, 2465, 2790
SatI	GCNGC	9 cut(s)	177, 397, 933, 1541, 2112, 2373, 2883, 2886, 2965
Sau96I	GGNCC	7 cut(s)	264, 265, 485, 669, 862, 1203, 2767
SchI	GAGTC	2 cut(s)	608, 2914
SduI	GDGCHC	4 cut(s)	268, 2038, 2346, 2752
SexAI	ACCWGGT	1 cut(s)	1249
SfaNI	GCATC	7 cut(s)	285, 865, 919, 1472, 2107, 2206, 2940
SfcI	CTRYAG	4 cut(s)	1538, 2421, 2616, 2631
SfoI	GGCGCC	1 cut(s)	565
Sfr274I	CTCGAG	2 cut(s)	109, 425
Sfr303I	CCGCGG	1 cut(s)	397
SfuI	TTCGAA	2 cut(s)	2802, 2859
SgrBI	CCGCGG	1 cut(s)	397
SinI	GGWCC	5 cut(s)	485, 669, 862, 1203, 2767
SlaI	CTCGAG	2 cut(s)	109, 425
SmaI	CCCGGG	1 cut(s)	2521
SmiMI	CAYNNNNRTG	3 cut(s)	2295, 2743, 2914
SmlI	CTYRAG	3 cut(s)	109, 425, 806
SmoI	CTYRAG	3 cut(s)	109, 425, 806
SseBI	AGGCCT	1 cut(s)	543
SspDI	GGCGCC	1 cut(s)	563
SspI	AATATT	2 cut(s)	1198, 1448
SspMI	CTAG	5 cut(s)	539, 710, 1058, 2025, 3037
StuI	AGGCCT	1 cut(s)	543
StyI	CCWWGG	4 cut(s)	567, 850, 937, 1109
TaaI	ACNGT	9 cut(s)	250, 343, 661, 1409, 1505, 1888, 2265, 2635, 3015
TaiI	ACGT	7 cut(s)	200, 330, 651, 1027, 1139, 1195, 1729
TaqII	GACCGA	2 cut(s)	242, 463
TatI	WGTACW	3 cut(s)	1906, 2178, 2253
TauI	GCSGC	3 cut(s)	179, 399, 2885
TfiI	GAWTC	7 cut(s)	230, 389, 980, 2071, 2804, 2958, 3021
Tru1I	TTAA	9 cut(s)	881, 1094, 1491, 1758, 1922, 2148, 2157, 2465, 2790
Tru9I	TTAA	9 cut(s)	881, 1094, 1491, 1758, 1922, 2148, 2157, 2465, 2790
TscAI	CASTG	2 cut(s)	1979, 2745
TseFI	GTSAC	6 cut(s)	15, 205, 382, 644, 1499, 2813
TseI	GCWGC	6 cut(s)	932, 1540, 2111, 2372, 2885, 2964
Tsp45I	GTSAC	6 cut(s)	15, 205, 382, 644, 1499, 2813
TspGWI	ACGGA	3 cut(s)	72, 1271, 2344
TspMI	CCCGGG	1 cut(s)	2519
TspRI	CASTG	2 cut(s)	1979, 2745
VneI	GTGCAC	1 cut(s)	2748
VpaK11BI	GGWCC	5 cut(s)	485, 669, 862, 1203, 2767
XagI	CCTNNNNNAGG	3 cut(s)	287, 449, 629
XapI	RAATTY	4 cut(s)	347, 1517, 1606, 1967
XceI	RCATGY	1 cut(s)	1667
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1889
XhoI	CTCGAG	2 cut(s)	109, 425
XmaI	CCCGGG	1 cut(s)	2519
XmiI	GTMKAC	5 cut(s)	5, 330, 656, 792, 1363
XspI	CTAG	5 cut(s)	539, 710, 1058, 2025, 3037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.