Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0012589

Physical Location & Seq

Genomic Coordinates Forward (+)

88844680 .. 88852699

Gene Structure 8020 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00067560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

ATGTCGATTCTACCCTCCCGCTTCCTCACCTTCCACCACCAACCAACCCTCCCATTCTCACCCTTCCCGCGATCATCACCGTCGCCGTCGCCTTCCATCTTCTACTCGCCGACGAACAATGTCTCCAGACCTCTACGCGCCGAACAATGTCTCCAACGGCTCTCCGCCGCGTCATCCTCCTCCTCCTCGGTCACGGTGGAAAACTCCGAGGACTACTACTCCGAATCCGACGGAGCCGCCGCGTCCCCCACCACGCAGTTCGTGATCCGCGCCCGCAACCGCATCGGCCTCCTCGGGATCATCACGCGCGTGTTCGACGTCCTCGGCCTCCGCGTCGACAAGGCCACCGTGGAATTCGAAGGCGACTACTTCGTGAAGCGGTTCTTCGTCACCGATTCCCGAGGCGCGAGGATCGAGGACCCGGAGAGCCTGGACCGGATCCAGAAGGCGTTACTGGACGCCATCGACGACTGCGGCGGGTCCGTCACGGCGGGGCCTACCACCACCACTAGAGGCGTCGTGGTCCGCAGGCCGGGATTGGGCCTGGGCTCCGGCGAGCGCGGCGCTAAGGCGGAGAGGATGTTCGGGTTGATGGACGGGTTCTTGAAAAACGACCCGATTACTCTTCAGAAGGATATTCTCTACCACGTTGAGTACACCGTGGCCAGGTCGAGGTTTAGCTTTGATGATTTTGAAGCTTATCAGGCTTTAGCGCACAGTGTAAGAGATCGCTTGATTGAGCGTTCGCATGATACTCAGCTTTACTTCAAGAGGAAAGATCCGAAGCGCGTGTACTTCCTCTCGCTTGAGTTTCTTATGGGTCGTTCATTGTCAAATAGTGTCATCAACCTTGGTATCCGAGACCAATACGCAGAGGCTTTAAGTCAGCTGGGCTTTGAGTTTGAAGTTCTGGCCGAGCAGGAAGGAGATGCTGCCCTTGGTAATGGTGGCCTAGCCCGTCTTTCAGCTTGCCAAATGGATTCTATGGCAACTTTGGATTATCCTGCATGGGGTTATGGACTGCGCTACCAATATGGACTATTCCGCCAGGTTATACTGGATGGCATTCAGCATGAACAACCTGACTTCTGGTTGAACTTTGGGAATCCCTGGGAGACAGAGCGGGTTCATGTAACATATCCAGTGAAGTTCTATGGGACTGTTGAAGAGGAAATCTTGAATGGAGAAAAATGTAATGTTTGGAACCCTGGAGAATTGGTAGAAGCTGTGGCTTATGATAATCCTATACCTGGTTACGGAACCAGGAACACCATTACTCTCCGCTTATGGGCTGGAAAACCAAGTGATCAACGTGATATGGAAGCTTTTAATACTGGAGATTACATCAATGCTCTTGTTTCTAGACAGAAAGCAGAAAATATAAGTAGTGTTTTGTACCCTGATGATCGTTCTTATCAGGGGAAGGAACTGCGGTTAAAACAACAATATTTCTTTGTCTCAGCATCCATACAAGACATAATACGGAGGTTCAAAGATGCTCACAGTAATTTTGATGAATTTCCTGATAAGGTTGCTCTGCAGCTCAATGATACTCACCCATCTCTTGCGATAGTTGAGGTCATGAGAGTGCTTGTCGACGAAGAGCATTTGGATTGGAATAAAGCTTGGGATATTGTTTGCAAACTCTTTTCTTTCACAATACACGCAGTAATTGCTGAAGGGTTGGAGAAAATCCCTGTTGATTTACTGGGTAGTCTTCTCCCACGCCATTTACAAATTATATATGACATTAACTTCAATTTTGTCGAAGAGTTGAAGAAGAGGATTGGTTTAGATTATGATCGTCTCTCTCGGATGTCTATTGTTGAGGAAGCTGCTGTAAAGAGTATCCGAATGGCAAACCTGTCGGTTGTGTGTGCTCATACTGTGAATGGTGTTTCCACAGTACATTCAGAACTATTAAAAACAAAATTATTCAAGGACTTCTATGAACTGTGGCCTGAGAAATTTCAATGCATGACAAATGGCGTCACCCAGCGCCGCTGGATTGTGGTGAGTAATCCTAGCCTGTGTGCTCTTCTCTCAAAATGGCTTGGAACAGAAGCCTGGATTCGTAATGTTGACCTTCTGACTGGCTTGAGAGAATATGCAGATGATGCTGATCTTCAACAAGAATGGATGATGGTTAAGAAGGTTAACAAGATGAGGCTTGCTGAGTACATTGAAGCAATGAGTGGTGTGAAGGTTGGGACCGCAATTTCTTGGAATGTTAGTTTAGATGCAATGTTTGATGTGCAGACAAAGAGAATACACGAGTACAAAAGACAATTGCTCAATATACTTGGCATCATTCATCGATATGACTGTATCAAGAACATGGATAAGAGTCAACAGAGCAAGGTTGTACCCCGTGTCTGCATTATTGGAGGAAAAGCTGCTCCTGGTTATGAAGTTGCAAAGAAGATTATCAAACTTTGTCATGCTGTAGCAGAAAAGATAAATAATGATAGCGACGTTGGGGATCTTCTAAAGCTGGTTTTTATTCCTGATTATAATGTATCGCTCGCTGAAGTGGTAATACCAGGGGCTGACCTTTCCCAGCACTTAAGCACCGCAGGACATGAGGCTTCTGGAACTGGCAGCATGAAATTTCTCATGAACGGATGTTTACTCTTGGCTACAGAAGATGGGTCTACAGTTGAAATTGTTGAAGAAATAGGGGCAGAGAACTTGTTTTTGTTTGGTGCAAAGATTCATGAAGTTCCTGAATTGCGTGAGAAAGGACCTGCTCATGACGTGCCACTGCAATGTGCACGCGTTTTAAGGCTCATCCGAGATGGTCATTTTGGCTTTCAAGACTATTTCCAATCTCTATGTGATAGTGTGGAGGGTGACGACTTCTATCTGCTCAGCTCTGACTTTGGGAGCTATTTAGAGGCACAGGCTGCTGCTGATAAAGCATTTGCGGATCCAAAGAAGTGGACTAAAATGAGCATCCTTAGCACAGCCGGTTCTGGTAGATTTAGCAGTGACAGAACAATCCGCGACTATGCTGAGAAGAGTTGGGGAATTGAACCATGCCGATTCCCTTCCGAGTTGGATGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0014074 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044464 GO:0046683 GO:0048037 GO:0050662 GO:0050896 GO:0051591 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

1022

Amino Acids

115.04

Weight (kDa)

5.55

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	294 - 1011	6.9e-295	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012589)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650
malus_domestica	MD10G1289300.v1.1
prunus_persica	Prupe.4G052400_v2.0.a1
pyrus_communis	pycom10g24190
rosa_chinensis	RchiOBHm_Chr5g0009141
rosa_laevigata	RLG00000031633
rosa_multiflora	Rmu_sc0005923.1_g000005
rosa_roxburghii	Rroxscaffold_1G00066860 Rroxscaffold_1G00067560
rosa_rugosa	Rorug04G0441500
rosa_samantha	Rh5AG070800 Rh5BG067700 Rh5CG079600 Rh5DG067400
rosa_wichuraiana	Rw5G006620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2514
AatII	GACGTC	1 cut(s)	321
Acc36I	ACCTGC	1 cut(s)	2755
AccBSI	CCGCTC	1 cut(s)	1123
AccI	GTMKAC	3 cut(s)	336, 1596, 2654
AclWI	GGATC	9 cut(s)	259, 305, 419, 433, 446, 773, 2490, 2924, 2937
AcoI	YGGCCR	2 cut(s)	663, 912
AcsI	RAATTY	4 cut(s)	353, 1517, 1967, 2609
AcuI	CTGAAG	3 cut(s)	611, 1698, 2550
AcyI	GRCGYC	4 cut(s)	318, 459, 516, 1989
AfaI	GTAC	7 cut(s)	656, 794, 1397, 1908, 2180, 2279, 2367
AfiI	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
AflII	CTTAAG	1 cut(s)	2566
AflIII	ACRYGT	1 cut(s)	2776
AjiI	CACGTC	1 cut(s)	2758
AleI	CACNNNNGTG	1 cut(s)	308
AloI	GAACNNNNNNTCC	6 cut(s)	107, 135, 139, 167, 566, 598
Alw21I	GWGCWC	3 cut(s)	1882, 2038, 2776
Alw26I	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
Alw44I	GTGCAC	1 cut(s)	2772
AlwI	GGATC	9 cut(s)	259, 305, 419, 433, 446, 773, 2490, 2924, 2937
AlwNI	CAGNNNCTG	1 cut(s)	2549
Ama87I	CYCGRG	2 cut(s)	293, 399
ApaLI	GTGCAC	1 cut(s)	2772
ApeKI	GCWGC	7 cut(s)	932, 1540, 1835, 2396, 2601, 2906, 2909
ApoI	RAATTY	4 cut(s)	353, 1517, 1967, 2609
Asp700I	GAANNNNTTC	1 cut(s)	380
AspS9I	GGNCC	8 cut(s)	418, 433, 480, 494, 523, 541, 2211, 2744
AsuC2I	CCSGG	2 cut(s)	422, 534
AsuHPI	GGTGA	8 cut(s)	19, 51, 69, 382, 1547, 1984, 2026, 2864
AsuII	TTCGAA	1 cut(s)	357
AvaI	CYCGRG	2 cut(s)	293, 399
AvaII	GGWCC	6 cut(s)	418, 433, 480, 523, 2211, 2744
BaeGI	GKGCMC	1 cut(s)	2776
BaeI	ACNNNNGTAYC	2 cut(s)	838, 871
BalI	TGGCCA	1 cut(s)	665
BamHI	GGATCC	2 cut(s)	438, 2929
BanII	GRGCYC	1 cut(s)	551
BarI	GAAGNNNNNNTAC	4 cut(s)	776, 808, 2523, 2555
BauI	CACGAG	1 cut(s)	2273
BbsI	GAAGAC	1 cut(s)	1709
Bbv12I	GWGCWC	3 cut(s)	1882, 2038, 2776
BbvI	GCAGC	7 cut(s)	919, 1552, 1822, 2383, 2613, 2893, 2896
BccI	CCATC	9 cut(s)	104, 470, 586, 1055, 1567, 2137, 2642, 2792, 3056
BceAI	ACGGC	3 cut(s)	70, 173, 504
BcgI	CGANNNNNNTGC	4 cut(s)	265, 299, 1848, 1882
BciVI	GTATCC	2 cut(s)	866, 1859
BclI	TGATCA	1 cut(s)	1306
BcnI	CCSGG	2 cut(s)	422, 534
BcoDI	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
BfaI	CTAG	5 cut(s)	510, 953, 1362, 2025, 3067
BfmI	CTRYAG	4 cut(s)	1538, 2445, 2640, 2655
BfoI	RGCGCY	2 cut(s)	567, 2002
BfrI	CTTAAG	1 cut(s)	2566
BfuAI	ACCTGC	1 cut(s)	2755
BfuI	GTATCC	2 cut(s)	866, 1859
BlpI	GCTNAGC	1 cut(s)	2870
Bme18I	GGWCC	6 cut(s)	418, 433, 480, 523, 2211, 2744
BmeT110I	CYCGRG	2 cut(s)	293, 399
BmgBI	CACGTC	1 cut(s)	2758
BmgT120I	GGNCC	8 cut(s)	418, 433, 480, 494, 523, 541, 2211, 2744
BmrI	ACTGGG	1 cut(s)	1718
BmsI	GCATC	8 cut(s)	291, 919, 1472, 1486, 2107, 2230, 2316, 2964
BmuI	ACTGGG	1 cut(s)	1718
BpiI	GAAGAC	1 cut(s)	1709
BpmI	CTGGAG	3 cut(s)	109, 1230, 1356
Bpu10I	CCTNAGC	2 cut(s)	567, 2960
Bpu1102I	GCTNAGC	1 cut(s)	2870
Bpu14I	TTCGAA	1 cut(s)	357
BpuEI	CTTGAG	2 cut(s)	827, 2119
BpuMI	CCSGG	2 cut(s)	422, 534
Bsa29I	ATCGAT	1 cut(s)	2317
BsaBI	GATNNNNATC	2 cut(s)	1800, 2121
BsaHI	GRCGYC	4 cut(s)	318, 459, 516, 1989
BsaI	GGTCTC	1 cut(s)	855
BsaWI	WCCGGW	1 cut(s)	435
Bsc4I	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
Bse118I	RCCGGY	1 cut(s)	2969
Bse1I	ACTGG	7 cut(s)	459, 1062, 1142, 1339, 1713, 2098, 2602
Bse3DI	GCAATG	3 cut(s)	2196, 2250, 2774
Bse8I	GATNNNNATC	2 cut(s)	1800, 2121
BseCI	ATCGAT	1 cut(s)	2317
BseJI	GATNNNNATC	2 cut(s)	1800, 2121
BseLI	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
BseMI	GCAATG	3 cut(s)	2196, 2250, 2774
BseMII	CTCAG	6 cut(s)	770, 1473, 1953, 2166, 2884, 3006
BseNI	ACTGG	7 cut(s)	459, 1062, 1142, 1339, 1713, 2098, 2602
BseRI	GAGGAG	4 cut(s)	169, 172, 175, 281
BseSI	GKGCMC	1 cut(s)	2776
BseXI	GCAGC	7 cut(s)	919, 1552, 1822, 2383, 2613, 2893, 2896
BseYI	CCCAGC	3 cut(s)	889, 1995, 2559
BsgI	GTGCAG	1 cut(s)	2276
BshVI	ATCGAT	1 cut(s)	2317
BsiHKAI	GWGCWC	3 cut(s)	1882, 2038, 2776
BsiHKCI	CYCGRG	2 cut(s)	293, 399
BsiSI	CCGG	5 cut(s)	422, 436, 533, 552, 2970
BslFI	GGGAC	3 cut(s)	229, 1171, 2224
BslI	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
BsmAI	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
BsmBI	CGTCTC	1 cut(s)	1811
BsmFI	GGGAC	3 cut(s)	229, 1171, 2224
BsmI	GAATGC	1 cut(s)	1065
Bso31I	GGTCTC	1 cut(s)	855
BsoBI	CYCGRG	2 cut(s)	293, 399
Bsp119I	TTCGAA	1 cut(s)	357
Bsp1286I	GDGCHC	4 cut(s)	551, 1882, 2038, 2776
Bsp1720I	GCTNAGC	1 cut(s)	2870
BspCNI	CTCAG	6 cut(s)	769, 1472, 1954, 2167, 2883, 3007
BspDI	ATCGAT	1 cut(s)	2317
BspHI	TCATGA	4 cut(s)	1581, 2616, 2716, 2752
BspMAI	CTGCAG	1 cut(s)	1542
BspMI	ACCTGC	1 cut(s)	2755
BspPI	GGATC	9 cut(s)	259, 305, 419, 433, 446, 773, 2490, 2924, 2937
BspQI	GCTCTTC	2 cut(s)	1596, 2043
BspT104I	TTCGAA	1 cut(s)	357
BspTI	CTTAAG	1 cut(s)	2566
BspTNI	GGTCTC	1 cut(s)	855
BsrBI	CCGCTC	1 cut(s)	1123
BsrDI	GCAATG	3 cut(s)	2196, 2250, 2774
BsrFI	RCCGGY	1 cut(s)	2969
BsrI	ACTGG	7 cut(s)	459, 1062, 1142, 1339, 1713, 2098, 2602
BssAI	RCCGGY	1 cut(s)	2969
BssNI	GRCGYC	4 cut(s)	318, 459, 516, 1989
BssSI	CACGAG	1 cut(s)	2273
BssT1I	CCWWGG	2 cut(s)	850, 937
Bst2BI	CACGAG	1 cut(s)	2273
Bst6I	CTCTTC	7 cut(s)	630, 1161, 1596, 1764, 1775, 2043, 3014
BstACI	GRCGYC	4 cut(s)	318, 459, 516, 1989
BstAFI	CTTAAG	1 cut(s)	2566
BstAPI	GCANNNNNTGC	3 cut(s)	1673, 2117, 2906
BstBI	TTCGAA	1 cut(s)	357
BstC8I	GCNNGC	7 cut(s)	274, 530, 557, 970, 2172, 2526, 2776
BstDEI	CTNAG	8 cut(s)	567, 756, 1459, 1962, 2175, 2870, 2960, 3015
BstDSI	CCRYGG	2 cut(s)	348, 660
BstH2I	RGCGCY	2 cut(s)	567, 2002
BstMAI	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
BstMWI	GCNNNNNNNGC	7 cut(s)	561, 704, 1673, 2117, 2906, 2918, 2961
BstSFI	CTRYAG	4 cut(s)	1538, 2445, 2640, 2655
BstSLI	GKGCMC	1 cut(s)	2776
BstV1I	GCAGC	7 cut(s)	919, 1552, 1822, 2383, 2613, 2893, 2896
BstV2I	GAAGAC	1 cut(s)	1709
BstX2I	RGATCY	4 cut(s)	438, 778, 2482, 2929
BstXI	CCANNNNNNTGG	1 cut(s)	2940
BstYI	RGATCY	4 cut(s)	438, 778, 2482, 2929
Bsu15I	ATCGAT	1 cut(s)	2317
BsuI	GTATCC	2 cut(s)	866, 1859
BsuTUI	ATCGAT	1 cut(s)	2317
BtgI	CCRYGG	2 cut(s)	348, 660
BtrI	CACGTC	1 cut(s)	2758
BtsI	GCAGTG	2 cut(s)	2762, 2995
BtsIMutI	CAGTG	4 cut(s)	724, 1149, 2762, 2995
BveI	ACCTGC	1 cut(s)	2755
Cac8I	GCNNGC	7 cut(s)	274, 530, 557, 970, 2172, 2526, 2776
CaiI	CAGNNNCTG	1 cut(s)	2549
CciI	TCATGA	4 cut(s)	1581, 2616, 2716, 2752
Cfr10I	RCCGGY	1 cut(s)	2969
Cfr13I	GGNCC	8 cut(s)	418, 433, 480, 494, 523, 541, 2211, 2744
ClaI	ATCGAT	1 cut(s)	2317
CseI	GACGC	6 cut(s)	159, 231, 322, 467, 505, 1978
CsiI	ACCWGGT	1 cut(s)	1249
Csp6I	GTAC	7 cut(s)	655, 793, 1396, 1907, 2179, 2278, 2366
CviQI	GTAC	7 cut(s)	655, 793, 1396, 1907, 2179, 2278, 2366
DdeI	CTNAG	8 cut(s)	567, 756, 1459, 1962, 2175, 2870, 2960, 3015
EaeI	YGGCCR	2 cut(s)	663, 912
Eam1104I	CTCTTC	7 cut(s)	630, 1161, 1596, 1764, 1775, 2043, 3014
EarI	CTCTTC	7 cut(s)	630, 1161, 1596, 1764, 1775, 2043, 3014
EciI	GGCGGA	3 cut(s)	154, 587, 1034
Eco130I	CCWWGG	2 cut(s)	850, 937
Eco24I	GRGCYC	1 cut(s)	551
Eco31I	GGTCTC	1 cut(s)	855
Eco47I	GGWCC	6 cut(s)	418, 433, 480, 523, 2211, 2744
Eco57I	CTGAAG	3 cut(s)	611, 1698, 2550
Eco88I	CYCGRG	2 cut(s)	293, 399
EcoO109I	RGGNCCY	3 cut(s)	418, 494, 2744
EcoRI	GAATTC	1 cut(s)	353
EcoT14I	CCWWGG	2 cut(s)	850, 937
EcoT22I	ATGCAT	1 cut(s)	1979
EcoT38I	GRGCYC	1 cut(s)	551
ErhI	CCWWGG	2 cut(s)	850, 937
Esp3I	CGTCTC	1 cut(s)	1811
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	3 cut(s)	229, 1171, 2224
FauI	CCCGC	6 cut(s)	26, 75, 281, 470, 484, 1116
FbaI	TGATCA	1 cut(s)	1306
FblI	GTMKAC	3 cut(s)	336, 1596, 2654
FokI	GGATG	9 cut(s)	160, 592, 1073, 1450, 1828, 2152, 2637, 2777, 2942
FriOI	GRGCYC	1 cut(s)	551
FspBI	CTAG	5 cut(s)	510, 953, 1362, 2025, 3067
GsaI	CCCAGC	3 cut(s)	893, 1999, 2563
GsuI	CTGGAG	3 cut(s)	109, 1230, 1356
HaeII	RGCGCY	2 cut(s)	567, 2002
HapII	CCGG	5 cut(s)	422, 436, 533, 552, 2970
HgaI	GACGC	6 cut(s)	159, 231, 322, 467, 505, 1978
Hin1I	GRCGYC	4 cut(s)	318, 459, 516, 1989
HincII	GTYRAC	5 cut(s)	337, 1597, 2083, 2158, 2351
HindII	GTYRAC	5 cut(s)	337, 1597, 2083, 2158, 2351
HindIII	AAGCTT	3 cut(s)	696, 1323, 1623
HinfI	GANTC	9 cut(s)	7, 224, 395, 980, 1105, 2071, 2347, 2713, 3045
HpaI	GTTAAC	1 cut(s)	2158
HpaII	CCGG	5 cut(s)	422, 436, 533, 552, 2970
HphI	GGTGA	8 cut(s)	19, 51, 69, 382, 1547, 1984, 2026, 2864
HpyCH4IV	ACGT	5 cut(s)	318, 648, 1312, 2475, 2757
HpyF10VI	GCNNNNNNNGC	7 cut(s)	561, 704, 1673, 2117, 2906, 2918, 2961
HpyF3I	CTNAG	8 cut(s)	567, 756, 1459, 1962, 2175, 2870, 2960, 3015
HpySE526I	ACGT	5 cut(s)	318, 648, 1312, 2475, 2757
Hsp92I	GRCGYC	4 cut(s)	318, 459, 516, 1989
Ksp22I	TGATCA	1 cut(s)	1306
KspAI	GTTAAC	1 cut(s)	2158
LguI	GCTCTTC	2 cut(s)	1596, 2043
LmnI	GCTCC	4 cut(s)	233, 554, 2404, 2886
Lsp1109I	GCAGC	7 cut(s)	919, 1552, 1822, 2383, 2613, 2893, 2896
LweI	GCATC	8 cut(s)	291, 919, 1472, 1486, 2107, 2230, 2316, 2964
MabI	ACCWGGT	1 cut(s)	1249
MaeI	CTAG	5 cut(s)	510, 953, 1362, 2025, 3067
MaeII	ACGT	5 cut(s)	318, 648, 1312, 2475, 2757
MaeIII	GTNAC	9 cut(s)	190, 388, 450, 484, 1132, 1253, 1990, 2852, 2990
MbiI	CCGCTC	1 cut(s)	1123
MfeI	CAATTG	1 cut(s)	2288
MflI	RGATCY	4 cut(s)	438, 778, 2482, 2929
MhlI	GDGCHC	4 cut(s)	551, 1882, 2038, 2776
MlsI	TGGCCA	1 cut(s)	665
MluI	ACGCGT	1 cut(s)	2776
MluNI	TGGCCA	1 cut(s)	665
MlyI	GAGTC	1 cut(s)	2356
MmeI	TCCRAC	4 cut(s)	178, 252, 1665, 3039
Mox20I	TGGCCA	1 cut(s)	665
Mph1103I	ATGCAT	1 cut(s)	1979
MroXI	GAANNNNTTC	1 cut(s)	380
MscI	TGGCCA	1 cut(s)	665
MseI	TTAA	9 cut(s)	881, 1329, 1436, 1752, 1922, 2148, 2157, 2567, 2783
MslI	CAYNNNNRTG	4 cut(s)	308, 1586, 2319, 2767
Msp20I	TGGCCA	1 cut(s)	665
MspA1I	CMGCKG	2 cut(s)	889, 2004
MspCI	CTTAAG	1 cut(s)	2566
MspI	CCGG	5 cut(s)	422, 436, 533, 552, 2970
MteI	GCGCNGCGC	1 cut(s)	562
MunI	CAATTG	1 cut(s)	2288
Mva1269I	GAATGC	1 cut(s)	1065
MwoI	GCNNNNNNNGC	7 cut(s)	561, 704, 1673, 2117, 2906, 2918, 2961
NciI	CCSGG	2 cut(s)	422, 534
NmeAIII	GCCGAG	2 cut(s)	303, 940
NmuCI	GTSAC	6 cut(s)	190, 388, 484, 1990, 2852, 2990
NsiI	ATGCAT	1 cut(s)	1979
NspV	TTCGAA	1 cut(s)	357
OliI	CACNNNNGTG	1 cut(s)	308
PagI	TCATGA	4 cut(s)	1581, 2616, 2716, 2752
PasI	CCCWGGG	1 cut(s)	1110
PciSI	GCTCTTC	2 cut(s)	1596, 2043
PcsI	WCGNNNNNNNCGW	2 cut(s)	330, 465
PctI	GAATGC	1 cut(s)	1065
PdmI	GAANNNNTTC	1 cut(s)	380
PfeI	GAWTC	8 cut(s)	7, 224, 395, 980, 1105, 2071, 2713, 3045
PleI	GAGTC	1 cut(s)	2355
PpsI	GAGTC	1 cut(s)	2355
PpuMI	RGGWCCY	2 cut(s)	418, 2744
PsiI	TTATAA	1 cut(s)	2514
Psp5II	RGGWCCY	2 cut(s)	418, 2744
PspFI	CCCAGC	3 cut(s)	889, 1995, 2559
PspPI	GGNCC	8 cut(s)	418, 433, 480, 494, 523, 541, 2211, 2744
PspPPI	RGGWCCY	2 cut(s)	418, 2744
PstI	CTGCAG	1 cut(s)	1542
PstNI	CAGNNNCTG	1 cut(s)	2549
PsuI	RGATCY	4 cut(s)	438, 778, 2482, 2929
PvuII	CAGCTG	1 cut(s)	889
RsaI	GTAC	7 cut(s)	656, 794, 1397, 1908, 2180, 2279, 2367
RsaNI	GTAC	7 cut(s)	655, 793, 1396, 1907, 2179, 2278, 2366
RseI	CAYNNNNRTG	4 cut(s)	308, 1586, 2319, 2767
SalI	GTCGAC	2 cut(s)	335, 1595
SapI	GCTCTTC	2 cut(s)	1596, 2043
SaqAI	TTAA	9 cut(s)	881, 1329, 1436, 1752, 1922, 2148, 2157, 2567, 2783
Sau96I	GGNCC	8 cut(s)	418, 433, 480, 494, 523, 541, 2211, 2744
SchI	GAGTC	1 cut(s)	2356
SduI	GDGCHC	4 cut(s)	551, 1882, 2038, 2776
SexAI	ACCWGGT	1 cut(s)	1249
SfaNI	GCATC	8 cut(s)	291, 919, 1472, 1486, 2107, 2230, 2316, 2964
SfcI	CTRYAG	4 cut(s)	1538, 2445, 2640, 2655
SfuI	TTCGAA	1 cut(s)	357
SinI	GGWCC	6 cut(s)	418, 433, 480, 523, 2211, 2744
SmiMI	CAYNNNNRTG	4 cut(s)	308, 1586, 2319, 2767
SmlI	CTYRAG	3 cut(s)	806, 2098, 2566
SmoI	CTYRAG	3 cut(s)	806, 2098, 2566
SspI	AATATT	1 cut(s)	1448
SspMI	CTAG	5 cut(s)	510, 953, 1362, 2025, 3067
StyI	CCWWGG	2 cut(s)	850, 937
TaiI	ACGT	5 cut(s)	321, 651, 1315, 2478, 2760
TaqII	GACCGA	1 cut(s)	178
TatI	WGTACW	5 cut(s)	654, 792, 1906, 2178, 2277
TauI	GCSGC	6 cut(s)	170, 239, 242, 477, 564, 2004
TfiI	GAWTC	8 cut(s)	7, 224, 395, 980, 1105, 2071, 2713, 3045
Tru1I	TTAA	9 cut(s)	881, 1329, 1436, 1752, 1922, 2148, 2157, 2567, 2783
Tru9I	TTAA	9 cut(s)	881, 1329, 1436, 1752, 1922, 2148, 2157, 2567, 2783
TscAI	CASTG	4 cut(s)	724, 1149, 2769, 2995
TseFI	GTSAC	6 cut(s)	190, 388, 484, 1990, 2852, 2990
TseI	GCWGC	7 cut(s)	932, 1540, 1835, 2396, 2601, 2906, 2909
Tsp45I	GTSAC	6 cut(s)	190, 388, 484, 1990, 2852, 2990
TspGWI	ACGGA	5 cut(s)	246, 472, 1272, 1498, 2637
TspRI	CASTG	4 cut(s)	724, 1149, 2769, 2995
Vha464I	CTTAAG	1 cut(s)	2566
VneI	GTGCAC	1 cut(s)	2772
VpaK11BI	GGWCC	6 cut(s)	418, 433, 480, 523, 2211, 2744
XapI	RAATTY	4 cut(s)	353, 1517, 1967, 2609
XbaI	TCTAGA	1 cut(s)	1361
XmiI	GTMKAC	3 cut(s)	336, 1596, 2654
XmnI	GAANNNNTTC	1 cut(s)	380
XspI	CTAG	5 cut(s)	510, 953, 1362, 2025, 3067
ZraI	GACGTC	1 cut(s)	319
Zsp2I	ATGCAT	1 cut(s)	1979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.