Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005923.1

Orthogroup ID

OG0012589

Physical Location & Seq

Genomic Coordinates Forward (+)

7414 .. 14930

Gene Structure 7517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005923.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

atgtcgattctaccctcgcgcttcctcaccttccaccaccgaccaaccctcgcattctcacccttcctgccatcatcaccgccgtcgccgtcgtccatcttctacgcgccgacgaacaatgtctccagacctctacgcgccgaacaatgtctccaaccgctctccgccgcgtcatcctcctcctcctcggtcacggtggaaaactccgaggaatactactccgaatccgacggagccgccgcgtccgccaccacgcagttcgtgatccgcgcccgcaaccgcatcggcctcctcgggatcatcacgcgcgtgttcgacgtcctcggcctcctcgtcgacagggccaccgtggaattcgaaggcgactacttcgtgaagcggttcttcgtcaccgactcccgaggcgcgaggatcgaggacccggagagcctggaccggatccagaaggcgttactggacgccatcgacgactgcggcgggtccgtcaccgcggggcctaccaccaccacgagaggcgtcgtggtccgcaggccgggtttgggcctgggctccggcgagcgcggcgctaaggcggagaggatgttcgggttgatggacgggttcttgaaaaacgacccggttagtcttcagaaggatattctctaccacgttgagtacaccgtggccaggtcgaggtttagctttgatgattttgaagcttatcaggctttagcgcacagtgtaagagatcgcttgattgagcgttcgcatgatactcagctttacttcaagaggaaagatccgaagcgcgtgtacttcctctcgcttgagtttcttatgggtcgttcattgtcgaatagtgtcatcaaccttggtatccgagaccaatacgcagaggctttaagtcagcttggctttgagtttgaagttctggccgagcaggaaggagatgctgcccttggtaatggtggcctagcccgtctttcagcttgccaaatggattctatggcaactttggattatcctgcatggggttatggactacgctaccaatatggactattccgccaggttatactggatggcattcagcatgaacaacctgacttctggttgaactttgggaatccctgggagacagagcgggttcatgtaacatatccagtgaagttctatgggactgttgaagaggaaatcttgaacggagaaaaatgtaatgtttggaaccctggagaattggtagaagctgtggcttatgataatcccatacctggttacggaaccaggaacaccattactctccgcttatgggctggaaaaccaagcgatcaacgtgatatggaggcttttaatactggagattacatcaatgctcttgtttctagacagaaagcagaaaatataagtagtgttttgtaccctgatgatcgttcttatcaggggaaggaactgcggttaaaacaacaatatttctttgtctcagcatccatacaagacataatacggaggttcaaagatgctcacagtaattttgatgaatttcctgataaggttgctctgcagctcaatgatactcacccatctcttgcgatagtcgaggtcatgagagtgcttgtcgacgaagagcatttggattggaataaagcttgggatattgtttgcaaactcttttctttcacaatacatgcagtaattgctgaagggttggagaaaatccctgttgatttactgggtagtcttctcccacgccatttacaaattatatatgacattaacttcaattttgtcgaagagttgaagaagaggattggtttagattatgatcgtctctctcggatgtctattgttgaggaagctgctgtaaagagtatccgaatggcaaacctgtcggttgtgtgtgctcatactgtgaatggtgtttccacagtacattcagaactattaaaaacaaaattattcaaggacttctatgaactgtggcctgagaaatttcaatgcatgacaaatggcgtcacccagcgccgctggattgtggtgagtaatcctagcctgtgtgctcttctctcaaaatggcttggaacagaagcctggattcgtaatgttgaccttctgactggcttgagagaatatgcagatgatgctgatcttcaacaagaatggatgatggttaagaaggttaacaagatgaggcttgctgagtacattgaagcaatgagtggtgtgaaggttagtttagatgcaatgtttgatgtgcagacaaagaggatacacgagtacaaaagacaattgctgaatatacttggcatcattcatcgatatgactgtatcaagaacatggataagagtcaacagagcaaagttgtaccccgtgtctgcattattggaggaaaagctgctcctggttatgaagttgcaaagaagattattaaactttgtcatgctgtagcagaaaagataaataatgatagcgacgttggggatcttctaaagctggtttttattcctgattataatgtatcgctcgctgaagtggtaataccaggggctgacctttcccagcacttaagcaccgcaggacatgaggcttctggaactggcagcatgaaatttctcatgaacggatgtttactcttggctacagaagatgggtctacagttgaaattgttgaagaaataggggcagagaacttgtttttgtttggtgcaaagattcatgaagttcctgaattgcgtgagaaaggacctgctcatgacgtgccactgcaatgtgcacgtgttttaaggctgatccgagatggtcattttggctttcaagactatttccaatctctatgtgatagtgtggagggtgacgacttctatctgctcagctctgactttgggagctatttagaggcacaggctgctgctgataaagcatttgcggatccaaagaagtggactaaaatgagcatccttagcacagccggctctggtagatttagcagtgacagaacaatccgcgactatgctgagaagagttggggaattgaaccgtgccgattcccttctgagtttgacggctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0014074 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044464 GO:0046683 GO:0048037 GO:0050662 GO:0050896 GO:0051591 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

1014

Amino Acids

114.07

Weight (kDa)

5.48

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012589)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650
malus_domestica	MD10G1289300.v1.1
prunus_persica	Prupe.4G052400_v2.0.a1
pyrus_communis	pycom10g24190
rosa_chinensis	RchiOBHm_Chr5g0009141
rosa_laevigata	RLG00000031633
rosa_multiflora	Rmu_sc0005923.1_g000005
rosa_roxburghii	Rroxscaffold_1G00066860 Rroxscaffold_1G00067560
rosa_rugosa	Rorug04G0441500
rosa_samantha	Rh5AG070800 Rh5BG067700 Rh5CG079600 Rh5DG067400
rosa_wichuraiana	Rw5G006620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2490
AatII	GACGTC	1 cut(s)	321
Acc36I	ACCTGC	1 cut(s)	2731
AccBSI	CCGCTC	2 cut(s)	160, 1123
AccI	GTMKAC	3 cut(s)	336, 1596, 2630
AcoI	YGGCCR	2 cut(s)	663, 912
AcsI	RAATTY	4 cut(s)	353, 1517, 1967, 2585
AcuI	CTGAAG	3 cut(s)	611, 1698, 2526
AcvI	CACGTG	1 cut(s)	2753
AcyI	GRCGYC	4 cut(s)	318, 459, 516, 1989
AfaI	GTAC	7 cut(s)	656, 794, 1397, 1908, 2180, 2255, 2343
AfiI	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
AflII	CTTAAG	1 cut(s)	2542
AflIII	ACRYGT	1 cut(s)	2752
AjiI	CACGTC	1 cut(s)	2734
AleI	CACNNNNGTG	1 cut(s)	308
AloI	GAACNNNNNNTCC	6 cut(s)	107, 135, 139, 167, 566, 598
Alw21I	GWGCWC	3 cut(s)	1882, 2038, 2752
Alw26I	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
Alw44I	GTGCAC	1 cut(s)	2748
AlwNI	CAGNNNCTG	1 cut(s)	2525
Ama87I	CYCGRG	2 cut(s)	293, 399
ApaLI	GTGCAC	1 cut(s)	2748
ApeKI	GCWGC	7 cut(s)	932, 1540, 1835, 2372, 2577, 2882, 2885
ApoI	RAATTY	4 cut(s)	353, 1517, 1967, 2585
Asp700I	GAANNNNTTC	1 cut(s)	380
AspS9I	GGNCC	8 cut(s)	342, 418, 433, 480, 494, 523, 541, 2720
AsuC2I	CCSGG	3 cut(s)	422, 534, 617
AsuHPI	GGTGA	9 cut(s)	19, 51, 69, 382, 478, 1547, 1984, 2026, 2840
AsuII	TTCGAA	1 cut(s)	357
AvaI	CYCGRG	2 cut(s)	293, 399
AvaII	GGWCC	5 cut(s)	418, 433, 480, 523, 2720
BaeGI	GKGCMC	1 cut(s)	2752
BaeI	ACNNNNGTAYC	4 cut(s)	838, 871, 2237, 2270
BalI	TGGCCA	1 cut(s)	665
BamHI	GGATCC	2 cut(s)	438, 2905
BanII	GRGCYC	1 cut(s)	551
BarI	GAAGNNNNNNTAC	4 cut(s)	776, 808, 2499, 2531
BauI	CACGAG	2 cut(s)	508, 2249
BbrPI	CACGTG	1 cut(s)	2753
BbsI	GAAGAC	2 cut(s)	617, 1709
Bbv12I	GWGCWC	3 cut(s)	1882, 2038, 2752
BbvI	GCAGC	7 cut(s)	919, 1552, 1822, 2359, 2589, 2869, 2872
BccI	CCATC	9 cut(s)	79, 104, 470, 586, 1055, 1567, 2137, 2618, 2768
BceAI	ACGGC	2 cut(s)	67, 73
BcgI	CGANNNNNNTGC	4 cut(s)	265, 299, 1848, 1882
BciVI	GTATCC	3 cut(s)	866, 1859, 2238
BcnI	CCSGG	3 cut(s)	422, 534, 617
BcoDI	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
BfaI	CTAG	4 cut(s)	953, 1362, 2025, 3043
BfmI	CTRYAG	4 cut(s)	1538, 2421, 2616, 2631
BfoI	RGCGCY	2 cut(s)	567, 2002
BfrI	CTTAAG	1 cut(s)	2542
BfuAI	ACCTGC	1 cut(s)	2731
BfuI	GTATCC	3 cut(s)	866, 1859, 2238
BlpI	GCTNAGC	1 cut(s)	2846
Bme18I	GGWCC	5 cut(s)	418, 433, 480, 523, 2720
BmeT110I	CYCGRG	2 cut(s)	293, 399
BmgBI	CACGTC	1 cut(s)	2734
BmgT120I	GGNCC	8 cut(s)	342, 418, 433, 480, 494, 523, 541, 2720
BmiI	GGNNCC	9 cut(s)	235, 420, 440, 481, 495, 550, 1205, 1261, 2907
BmrI	ACTGGG	1 cut(s)	1718
BmsI	GCATC	8 cut(s)	291, 919, 1472, 1486, 2107, 2206, 2292, 2940
BmuI	ACTGGG	1 cut(s)	1718
BpiI	GAAGAC	2 cut(s)	617, 1709
BpmI	CTGGAG	3 cut(s)	109, 1230, 1356
Bpu10I	CCTNAGC	2 cut(s)	567, 2936
Bpu1102I	GCTNAGC	1 cut(s)	2846
Bpu14I	TTCGAA	1 cut(s)	357
BpuEI	CTTGAG	2 cut(s)	827, 2119
BpuMI	CCSGG	3 cut(s)	422, 534, 617
Bsa29I	ATCGAT	1 cut(s)	2293
BsaAI	YACGTR	1 cut(s)	2753
BsaBI	GATNNNNATC	2 cut(s)	1800, 2121
BsaHI	GRCGYC	4 cut(s)	318, 459, 516, 1989
BsaI	GGTCTC	1 cut(s)	855
BsaWI	WCCGGW	1 cut(s)	435
BsaXI	ACNNNNNCTCC	8 cut(s)	107, 135, 137, 165, 566, 596, 1203, 1233
Bsc4I	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
Bse118I	RCCGGY	1 cut(s)	2945
Bse1I	ACTGG	7 cut(s)	459, 1062, 1142, 1339, 1713, 2098, 2578
Bse3DI	GCAATG	3 cut(s)	2196, 2226, 2750
Bse8I	GATNNNNATC	2 cut(s)	1800, 2121
BseCI	ATCGAT	1 cut(s)	2293
BseGI	GGATG	8 cut(s)	173, 585, 1066, 1463, 1821, 2145, 2606, 2931
BseJI	GATNNNNATC	2 cut(s)	1800, 2121
BseLI	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
BseMI	GCAATG	3 cut(s)	2196, 2226, 2750
BseMII	CTCAG	7 cut(s)	770, 1473, 1953, 2166, 2860, 2982, 3021
BseNI	ACTGG	7 cut(s)	459, 1062, 1142, 1339, 1713, 2098, 2578
BseRI	GAGGAG	5 cut(s)	169, 172, 175, 281, 320
BseSI	GKGCMC	1 cut(s)	2752
BseXI	GCAGC	7 cut(s)	919, 1552, 1822, 2359, 2589, 2869, 2872
BseYI	CCCAGC	2 cut(s)	1995, 2535
BsgI	GTGCAG	1 cut(s)	2252
BshVI	ATCGAT	1 cut(s)	2293
BsiHKAI	GWGCWC	3 cut(s)	1882, 2038, 2752
BsiHKCI	CYCGRG	2 cut(s)	293, 399
BsiSI	CCGG	6 cut(s)	422, 436, 533, 552, 617, 2946
BslFI	GGGAC	1 cut(s)	1171
BslI	CCNNNNNNNGG	8 cut(s)	532, 539, 666, 672, 1010, 1250, 1256, 1288
BsmAI	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
BsmBI	CGTCTC	1 cut(s)	1811
BsmFI	GGGAC	1 cut(s)	1171
BsmI	GAATGC	2 cut(s)	53, 1065
Bso31I	GGTCTC	1 cut(s)	855
BsoBI	CYCGRG	2 cut(s)	293, 399
Bsp119I	TTCGAA	1 cut(s)	357
Bsp1286I	GDGCHC	4 cut(s)	551, 1882, 2038, 2752
Bsp1720I	GCTNAGC	1 cut(s)	2846
BspCNI	CTCAG	7 cut(s)	769, 1472, 1954, 2167, 2859, 2983, 3022
BspDI	ATCGAT	1 cut(s)	2293
BspHI	TCATGA	4 cut(s)	1581, 2592, 2692, 2728
BspLI	GGNNCC	9 cut(s)	235, 420, 440, 481, 495, 550, 1205, 1261, 2907
BspMAI	CTGCAG	1 cut(s)	1542
BspMI	ACCTGC	1 cut(s)	2731
BspQI	GCTCTTC	2 cut(s)	1596, 2043
BspT104I	TTCGAA	1 cut(s)	357
BspTI	CTTAAG	1 cut(s)	2542
BspTNI	GGTCTC	1 cut(s)	855
BsrBI	CCGCTC	2 cut(s)	160, 1123
BsrDI	GCAATG	3 cut(s)	2196, 2226, 2750
BsrFI	RCCGGY	1 cut(s)	2945
BsrI	ACTGG	7 cut(s)	459, 1062, 1142, 1339, 1713, 2098, 2578
BssAI	RCCGGY	1 cut(s)	2945
BssNI	GRCGYC	4 cut(s)	318, 459, 516, 1989
BssSI	CACGAG	2 cut(s)	508, 2249
BssT1I	CCWWGG	2 cut(s)	850, 937
Bst2BI	CACGAG	2 cut(s)	508, 2249
Bst6I	CTCTTC	6 cut(s)	1161, 1596, 1764, 1775, 2043, 2990
BstACI	GRCGYC	4 cut(s)	318, 459, 516, 1989
BstAFI	CTTAAG	1 cut(s)	2542
BstAPI	GCANNNNNTGC	3 cut(s)	1673, 2117, 2882
BstBAI	YACGTR	1 cut(s)	2753
BstBI	TTCGAA	1 cut(s)	357
BstC8I	GCNNGC	7 cut(s)	274, 530, 557, 970, 2172, 2502, 2947
BstDEI	CTNAG	9 cut(s)	567, 756, 1459, 1962, 2175, 2846, 2936, 2991, 3030
BstDSI	CCRYGG	3 cut(s)	348, 489, 660
BstF5I	GGATG	8 cut(s)	173, 585, 1066, 1463, 1821, 2145, 2606, 2931
BstH2I	RGCGCY	2 cut(s)	567, 2002
BstMAI	GTCTC	6 cut(s)	127, 155, 855, 1109, 1462, 1811
BstMWI	GCNNNNNNNGC	9 cut(s)	245, 561, 704, 1673, 2117, 2882, 2894, 2937, 2946
BstNSI	RCATGY	1 cut(s)	1667
BstSFI	CTRYAG	4 cut(s)	1538, 2421, 2616, 2631
BstSLI	GKGCMC	1 cut(s)	2752
BstV1I	GCAGC	7 cut(s)	919, 1552, 1822, 2359, 2589, 2869, 2872
BstV2I	GAAGAC	2 cut(s)	617, 1709
BstX2I	RGATCY	4 cut(s)	438, 778, 2458, 2905
BstXI	CCANNNNNNTGG	1 cut(s)	2916
BstYI	RGATCY	4 cut(s)	438, 778, 2458, 2905
Bsu15I	ATCGAT	1 cut(s)	2293
BsuI	GTATCC	3 cut(s)	866, 1859, 2238
BsuTUI	ATCGAT	1 cut(s)	2293
BtgI	CCRYGG	3 cut(s)	348, 489, 660
BtrI	CACGTC	1 cut(s)	2734
BtsCI	GGATG	8 cut(s)	173, 585, 1066, 1463, 1821, 2145, 2606, 2931
BtsI	GCAGTG	2 cut(s)	2738, 2971
BtsIMutI	CAGTG	4 cut(s)	724, 1149, 2738, 2971
BveI	ACCTGC	1 cut(s)	2731
Cac8I	GCNNGC	7 cut(s)	274, 530, 557, 970, 2172, 2502, 2947
CaiI	CAGNNNCTG	1 cut(s)	2525
CciI	TCATGA	4 cut(s)	1581, 2592, 2692, 2728
Cfr10I	RCCGGY	1 cut(s)	2945
Cfr13I	GGNCC	8 cut(s)	342, 418, 433, 480, 494, 523, 541, 2720
Cfr42I	CCGCGG	1 cut(s)	492
ClaI	ATCGAT	1 cut(s)	2293
CseI	GACGC	5 cut(s)	159, 231, 467, 505, 1978
CsiI	ACCWGGT	1 cut(s)	1249
Csp6I	GTAC	7 cut(s)	655, 793, 1396, 1907, 2179, 2254, 2342
CviQI	GTAC	7 cut(s)	655, 793, 1396, 1907, 2179, 2254, 2342
DdeI	CTNAG	9 cut(s)	567, 756, 1459, 1962, 2175, 2846, 2936, 2991, 3030
EaeI	YGGCCR	2 cut(s)	663, 912
Eam1104I	CTCTTC	6 cut(s)	1161, 1596, 1764, 1775, 2043, 2990
EarI	CTCTTC	6 cut(s)	1161, 1596, 1764, 1775, 2043, 2990
EciI	GGCGGA	4 cut(s)	154, 235, 587, 1034
Eco130I	CCWWGG	2 cut(s)	850, 937
Eco24I	GRGCYC	1 cut(s)	551
Eco31I	GGTCTC	1 cut(s)	855
Eco47I	GGWCC	5 cut(s)	418, 433, 480, 523, 2720
Eco57I	CTGAAG	3 cut(s)	611, 1698, 2526
Eco72I	CACGTG	1 cut(s)	2753
Eco88I	CYCGRG	2 cut(s)	293, 399
EcoO109I	RGGNCCY	3 cut(s)	418, 494, 2720
EcoRI	GAATTC	1 cut(s)	353
EcoT14I	CCWWGG	2 cut(s)	850, 937
EcoT22I	ATGCAT	1 cut(s)	1979
EcoT38I	GRGCYC	1 cut(s)	551
ErhI	CCWWGG	2 cut(s)	850, 937
Esp3I	CGTCTC	1 cut(s)	1811
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	1 cut(s)	1171
FauI	CCCGC	4 cut(s)	281, 470, 484, 1116
FblI	GTMKAC	3 cut(s)	336, 1596, 2630
FokI	GGATG	8 cut(s)	160, 592, 1073, 1450, 1828, 2152, 2613, 2918
FriOI	GRGCYC	1 cut(s)	551
FspBI	CTAG	4 cut(s)	953, 1362, 2025, 3043
GsaI	CCCAGC	2 cut(s)	1999, 2539
GsuI	CTGGAG	3 cut(s)	109, 1230, 1356
HaeII	RGCGCY	2 cut(s)	567, 2002
HapII	CCGG	6 cut(s)	422, 436, 533, 552, 617, 2946
HgaI	GACGC	5 cut(s)	159, 231, 467, 505, 1978
Hin1I	GRCGYC	4 cut(s)	318, 459, 516, 1989
HincII	GTYRAC	5 cut(s)	337, 1597, 2083, 2158, 2327
HindII	GTYRAC	5 cut(s)	337, 1597, 2083, 2158, 2327
HindIII	AAGCTT	2 cut(s)	696, 1623
HinfI	GANTC	9 cut(s)	7, 224, 395, 980, 1105, 2071, 2323, 2689, 3021
HpaI	GTTAAC	1 cut(s)	2158
HpaII	CCGG	6 cut(s)	422, 436, 533, 552, 617, 2946
HphI	GGTGA	9 cut(s)	19, 51, 69, 382, 478, 1547, 1984, 2026, 2840
HpyCH4IV	ACGT	6 cut(s)	318, 648, 1312, 2451, 2733, 2752
HpyF10VI	GCNNNNNNNGC	9 cut(s)	245, 561, 704, 1673, 2117, 2882, 2894, 2937, 2946
HpyF3I	CTNAG	9 cut(s)	567, 756, 1459, 1962, 2175, 2846, 2936, 2991, 3030
HpySE526I	ACGT	6 cut(s)	318, 648, 1312, 2451, 2733, 2752
Hsp92I	GRCGYC	4 cut(s)	318, 459, 516, 1989
KroI	GCCGGC	1 cut(s)	2945
KroNI	GCCGGC	1 cut(s)	2947
KspAI	GTTAAC	1 cut(s)	2158
KspI	CCGCGG	1 cut(s)	492
LguI	GCTCTTC	2 cut(s)	1596, 2043
LmnI	GCTCC	4 cut(s)	233, 554, 2380, 2862
Lsp1109I	GCAGC	7 cut(s)	919, 1552, 1822, 2359, 2589, 2869, 2872
LweI	GCATC	8 cut(s)	291, 919, 1472, 1486, 2107, 2206, 2292, 2940
MabI	ACCWGGT	1 cut(s)	1249
MaeI	CTAG	4 cut(s)	953, 1362, 2025, 3043
MaeII	ACGT	6 cut(s)	318, 648, 1312, 2451, 2733, 2752
MaeIII	GTNAC	9 cut(s)	190, 388, 450, 484, 1132, 1253, 1990, 2828, 2966
MbiI	CCGCTC	2 cut(s)	160, 1123
MfeI	CAATTG	1 cut(s)	2264
MflI	RGATCY	4 cut(s)	438, 778, 2458, 2905
MhlI	GDGCHC	4 cut(s)	551, 1882, 2038, 2752
MlsI	TGGCCA	1 cut(s)	665
MluNI	TGGCCA	1 cut(s)	665
MlyI	GAGTC	2 cut(s)	389, 2332
MmeI	TCCRAC	3 cut(s)	178, 252, 1665
Mox20I	TGGCCA	1 cut(s)	665
Mph1103I	ATGCAT	1 cut(s)	1979
MroNI	GCCGGC	1 cut(s)	2945
MroXI	GAANNNNTTC	1 cut(s)	380
MscI	TGGCCA	1 cut(s)	665
MslI	CAYNNNNRTG	4 cut(s)	308, 1586, 2295, 2743
Msp20I	TGGCCA	1 cut(s)	665
MspA1I	CMGCKG	2 cut(s)	491, 2004
MspCI	CTTAAG	1 cut(s)	2542
MspI	CCGG	6 cut(s)	422, 436, 533, 552, 617, 2946
MteI	GCGCNGCGC	1 cut(s)	562
MunI	CAATTG	1 cut(s)	2264
Mva1269I	GAATGC	2 cut(s)	53, 1065
MwoI	GCNNNNNNNGC	9 cut(s)	245, 561, 704, 1673, 2117, 2882, 2894, 2937, 2946
NaeI	GCCGGC	1 cut(s)	2947
NciI	CCSGG	3 cut(s)	422, 534, 617
NgoMIV	GCCGGC	1 cut(s)	2945
NlaIV	GGNNCC	9 cut(s)	235, 420, 440, 481, 495, 550, 1205, 1261, 2907
NmeAIII	GCCGAG	2 cut(s)	303, 940
NmuCI	GTSAC	6 cut(s)	190, 388, 484, 1990, 2828, 2966
NsiI	ATGCAT	1 cut(s)	1979
NspI	RCATGY	1 cut(s)	1667
NspV	TTCGAA	1 cut(s)	357
OliI	CACNNNNGTG	1 cut(s)	308
PagI	TCATGA	4 cut(s)	1581, 2592, 2692, 2728
PasI	CCCWGGG	1 cut(s)	1110
PciSI	GCTCTTC	2 cut(s)	1596, 2043
PcsI	WCGNNNNNNNCGW	2 cut(s)	330, 465
PctI	GAATGC	2 cut(s)	53, 1065
PdiI	GCCGGC	1 cut(s)	2947
PdmI	GAANNNNTTC	1 cut(s)	380
PfeI	GAWTC	7 cut(s)	7, 224, 980, 1105, 2071, 2689, 3021
PleI	GAGTC	2 cut(s)	389, 2331
PmaCI	CACGTG	1 cut(s)	2753
PmlI	CACGTG	1 cut(s)	2753
PpsI	GAGTC	2 cut(s)	389, 2331
Ppu21I	YACGTR	1 cut(s)	2753
PpuMI	RGGWCCY	2 cut(s)	418, 2720
PsiI	TTATAA	1 cut(s)	2490
Psp5II	RGGWCCY	2 cut(s)	418, 2720
PspCI	CACGTG	1 cut(s)	2753
PspFI	CCCAGC	2 cut(s)	1995, 2535
PspN4I	GGNNCC	9 cut(s)	235, 420, 440, 481, 495, 550, 1205, 1261, 2907
PspPI	GGNCC	8 cut(s)	342, 418, 433, 480, 494, 523, 541, 2720
PspPPI	RGGWCCY	2 cut(s)	418, 2720
PstI	CTGCAG	1 cut(s)	1542
PstNI	CAGNNNCTG	1 cut(s)	2525
PsuI	RGATCY	4 cut(s)	438, 778, 2458, 2905
RsaI	GTAC	7 cut(s)	656, 794, 1397, 1908, 2180, 2255, 2343
RsaNI	GTAC	7 cut(s)	655, 793, 1396, 1907, 2179, 2254, 2342
RseI	CAYNNNNRTG	4 cut(s)	308, 1586, 2295, 2743
SacII	CCGCGG	1 cut(s)	492
SalI	GTCGAC	2 cut(s)	335, 1595
SapI	GCTCTTC	2 cut(s)	1596, 2043
Sau96I	GGNCC	8 cut(s)	342, 418, 433, 480, 494, 523, 541, 2720
SchI	GAGTC	2 cut(s)	389, 2332
SduI	GDGCHC	4 cut(s)	551, 1882, 2038, 2752
SexAI	ACCWGGT	1 cut(s)	1249
SfaNI	GCATC	8 cut(s)	291, 919, 1472, 1486, 2107, 2206, 2292, 2940
SfcI	CTRYAG	4 cut(s)	1538, 2421, 2616, 2631
Sfr303I	CCGCGG	1 cut(s)	492
SfuI	TTCGAA	1 cut(s)	357
SgrBI	CCGCGG	1 cut(s)	492
SinI	GGWCC	5 cut(s)	418, 433, 480, 523, 2720
SmiMI	CAYNNNNRTG	4 cut(s)	308, 1586, 2295, 2743
SmlI	CTYRAG	3 cut(s)	806, 2098, 2542
SmoI	CTYRAG	3 cut(s)	806, 2098, 2542
SspI	AATATT	1 cut(s)	1448
SspMI	CTAG	4 cut(s)	953, 1362, 2025, 3043
StyI	CCWWGG	2 cut(s)	850, 937
TaiI	ACGT	6 cut(s)	321, 651, 1315, 2454, 2736, 2755
TaqII	GACCGA	1 cut(s)	178
TatI	WGTACW	5 cut(s)	654, 792, 1906, 2178, 2253
TauI	GCSGC	6 cut(s)	170, 239, 242, 477, 564, 2004
TfiI	GAWTC	7 cut(s)	7, 224, 980, 1105, 2071, 2689, 3021
TscAI	CASTG	4 cut(s)	724, 1149, 2745, 2971
TseFI	GTSAC	6 cut(s)	190, 388, 484, 1990, 2828, 2966
TseI	GCWGC	7 cut(s)	932, 1540, 1835, 2372, 2577, 2882, 2885
Tsp45I	GTSAC	6 cut(s)	190, 388, 484, 1990, 2828, 2966
TspGWI	ACGGA	6 cut(s)	246, 472, 1197, 1272, 1498, 2613
TspRI	CASTG	4 cut(s)	724, 1149, 2745, 2971
Vha464I	CTTAAG	1 cut(s)	2542
VneI	GTGCAC	1 cut(s)	2748
VpaK11BI	GGWCC	5 cut(s)	418, 433, 480, 523, 2720
XapI	RAATTY	4 cut(s)	353, 1517, 1967, 2585
XbaI	TCTAGA	1 cut(s)	1361
XceI	RCATGY	1 cut(s)	1667
XmiI	GTMKAC	3 cut(s)	336, 1596, 2630
XmnI	GAANNNNTTC	1 cut(s)	380
XspI	CTAG	4 cut(s)	953, 1362, 2025, 3043
ZraI	GACGTC	1 cut(s)	319
Zsp2I	ATGCAT	1 cut(s)	1979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.