Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012589

Physical Location & Seq

Genomic Coordinates Reverse (-)

6027822 .. 6035191

Gene Structure 7370 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29006

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGTTCGGGTTGATGGACGGGTTCTTGAAAAACGACCCGATTAGTCTTCAGAAGGATATTCTCTACCACGTTGAGTACACCGTGGCCAGGTCGAGGTTTAGCTTTGATGATTTTGAAGCTTATCAGGCTTTAGCGCACAGTGTAAGAGATCGCTTGATTGAGCGTTCGCATGATACTCAGCTTTTCTTCAAGAGGAAAGATCCGAAGCGCGTGTACTTCCTCTCGCTTGAGTTTCTTATGGGTCGTTCATTGTCGAATAGTGTCATCAACCTTGGTATCCGAGACCAATACGCAGAGGCTTTAAGTCAGCTTGGCTTTGAGTTTGAAGTTCTGGCCGAGCAGGAAGGAGATGCTGCCCTTGGTAATGGTGGCCTAGCCCGTCTTTCAGCTTGCCAAATGGATTCTATGGCAACTTTGGATTATCCTGCATGGGGTTATGGACTACGCTACCAATATGGACTATTCCGCCAGGTTATACTGGATGGCATTCAGCATGAACAGCCTGACTTCTGGTTGAACTTTGGGAATCCCTGGGAGACAGAGCGGGTTCATGTAACATATCCAGTGAAGTTCTATGGGACTGTTGAAGAGGAAATCTTGAACGGAGAAAAATGTAATGTTTGGAACCCTGGAGAATTGGTAGAAGCTGTGGCGTATGATAATCCTATACCTGGTTACGGAACCAGAAACACCATTACTCTCCGCTTATGGGCTGGAAAACCAAGTGATCAACGTGATATGGAAGCTTTTAATACTGGAGATTACATCAATGCTCTTGTTTCTAGACAGAAAGCAGAAAATATAAGTAGTGTTTTGTACCCTGATGATCGTTCTTATCAGGGGAAGGAACTGCGGTTAAAACAACAATACTTCTTTGTCTCAGCATCCATACAAGACATAATACGGAGGTTCAAAGATGCTCACAGTAATTTTGATGAATTTCCTGATAAGGTTGCTCTGCAGCTCAATGATACTCACCCATCTCTTGCGATAGTCGAGGTCATGAGAGTGCTTGTCGACGAAGAGCATTTGGATTGGCATAAAGCTTGGGATATTGTTTGCAAACTCTTTTCTTTCACAATACACGCAGTAATTGCTGAAGGGTTGGAGAAAATCCCTGTTGATTTACTGGGTAGTCTTCTCCCACGCCATTTACAAATTATATATGACATTAACTTCAATTTTGTCGAAGAGTTGAAGAAGAGGATTGGTTTAGATTATGATCGTCTCTCTCGGATGTCTATTGTTGAGGAAGCTGCTGTAAAGACTATCCGAATGGCAAACCTGTCGGTTGTGTGTGCTCATACTGTGAATGGTGTTTCCACAGTACATTCAGAACTATTAAAAACAAAATTATTCAAGGACTTCTATGAACTGTGGCCTGAGAAATTTCAATGCATGACAAATGGCGTCACCCAGCGCCGCTGGATTGTGGTGAGTAATCCTAGCCTGTGTGCTCTTCTCTCAAAATGGCTTGGAACAGAAGCCTGGATTCGTAATGTTGACCTTCTGACTGGCTTGAGAGAATATGCAGATGATGCTGATCTTCAACAAGAATGGATGATGGTTAAGAAGGTTAACAAGATGAGGCTTGCTGAGTACATTGAAGCAATGAGTGGTGTGAAGGTTAGTTTAGATGCAATGTTTGATGTGCAGACAAAGAGAATACACGAGTACAAAAGACAATTGCTCAATATACTTGGCATCATTCATCGATATGACTGTATCAAGAACATGGATAAGAGTCAACAGAGCAAGGTTGTACCCCGTGTCTGCATTATTGGAGGAAAAGCTGCTCCTGGTTATGAAGTTGCAAAGAAGATTATCAAACTTTGTCATGCTGTAGCAGAAAAGATAAATAATGATAGCGACGTTGGGGATCTTCTAAAGCTGGTTTTTATTCCTGATTATAATGTATCGCTTGCTGAAGTGGTAATACCAGGGGCTGACCTTTCCCAGCACTTAAGCACCGCAGGACATGAGGCTTCTGGAACTGGCAGCATGAAATTTCTCATGAACGGATGTTTACTCTTGGCTACAGAAGATGGGTCTACAGTTGAAATTGTTGAAGAAATAGGGGCAGAGAACTTGTTTTTGTTTGGTGCAAAGATTCATGAAGTTCCTGAATTGCGTGAGAAAGGACCTGCTCATGACGTGCCACTGCAATGTGCACGTGTTTTAAGGCTGATCCGAGATGGTCATTTTGGCTTTCAAGACTATTTCCAATCTCTATGTGATAGTGTGGAGGGTGAGGACTTCTATCTGCTCAGCTCTGACTTTGGGAGCTATTTAGAGGCACAGGCTGCTGCTGATAAAGCATTTGCGGATCCAAAGAAGTGGACTAAAATGAGCATCCTTAGCACAGCCGGTTCTGGCAGATTTAGCAGTGACAGAACAATCCGCGACTATGCTGAGAAGAGTTGGGGAATTGAACCGTGCCGATTCCCTTCCGAGTTCGACGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0014074 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044464 GO:0046683 GO:0048037 GO:0050662 GO:0050896 GO:0051591 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

821

Amino Acids

93.34

Weight (kDa)

5.4

Isoelectric Point (pI)

36.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	101 - 810	1.5e-298	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012589)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650 FvH4_3g08650
malus_domestica	MD10G1289300.v1.1
prunus_persica	Prupe.4G052400_v2.0.a1
pyrus_communis	pycom10g24190
rosa_chinensis	RchiOBHm_Chr5g0009141
rosa_laevigata	RLG00000031633
rosa_multiflora	Rmu_sc0005923.1_g000005
rosa_roxburghii	Rroxscaffold_1G00066860 Rroxscaffold_1G00067560
rosa_rugosa	Rorug04G0441500
rosa_samantha	Rh5AG070800 Rh5BG067700 Rh5CG079600 Rh5DG067400
rosa_wichuraiana	Rw5G006620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1911
Acc36I	ACCTGC	1 cut(s)	2152
AccBSI	CCGCTC	1 cut(s)	544
AccI	GTMKAC	2 cut(s)	1017, 2051
AccII	CGCG	2 cut(s)	210, 2403
AciI	CCGC	8 cut(s)	466, 544, 703, 853, 1423, 1971, 2324, 2401
AclWI	GGATC	5 cut(s)	194, 1887, 2182, 2321, 2334
AcoI	YGGCCR	2 cut(s)	84, 333
AcsI	RAATTY	3 cut(s)	938, 1388, 2006
AcuI	CTGAAG	3 cut(s)	32, 1119, 1947
AcvI	CACGTG	1 cut(s)	2174
AcyI	GRCGYC	1 cut(s)	1410
AfaI	GTAC	7 cut(s)	77, 215, 818, 1329, 1601, 1676, 1764
AfiI	CCNNNNNNNGG	6 cut(s)	87, 93, 431, 671, 677, 709
AflII	CTTAAG	1 cut(s)	1963
AflIII	ACRYGT	1 cut(s)	2173
AjiI	CACGTC	1 cut(s)	2155
AjnI	CCWGG	8 cut(s)	86, 468, 530, 628, 670, 1487, 1798, 1939
Alw21I	GWGCWC	3 cut(s)	1303, 1459, 2173
Alw26I	GTCTC	4 cut(s)	276, 530, 883, 1232
Alw44I	GTGCAC	1 cut(s)	2169
AlwI	GGATC	5 cut(s)	194, 1887, 2182, 2321, 2334
AlwNI	CAGNNNCTG	1 cut(s)	1946
AoxI	GGCC	4 cut(s)	84, 333, 370, 1379
ApaLI	GTGCAC	1 cut(s)	2169
ApeKI	GCWGC	7 cut(s)	353, 961, 1256, 1793, 1998, 2303, 2306
ApoI	RAATTY	3 cut(s)	938, 1388, 2006
AspLEI	GCGC	3 cut(s)	136, 210, 1422
AspS9I	GGNCC	1 cut(s)	2141
AsuHPI	GGTGA	4 cut(s)	968, 1405, 1447, 2261
AvaII	GGWCC	1 cut(s)	2141
BaeGI	GKGCMC	1 cut(s)	2173
BaeI	ACNNNNGTAYC	2 cut(s)	259, 292
BalI	TGGCCA	1 cut(s)	86
BamHI	GGATCC	1 cut(s)	2326
BarI	GAAGNNNNNNTAC	4 cut(s)	197, 229, 1920, 1952
BauI	CACGAG	1 cut(s)	1670
BbrPI	CACGTG	1 cut(s)	2174
BbsI	GAAGAC	2 cut(s)	38, 1130
Bbv12I	GWGCWC	3 cut(s)	1303, 1459, 2173
BbvI	GCAGC	7 cut(s)	340, 973, 1243, 1780, 2010, 2290, 2293
BccI	CCATC	6 cut(s)	7, 476, 988, 1558, 2039, 2189
BcgI	CGANNNNNNTGC	2 cut(s)	1269, 1303
BciT130I	CCWGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
BciVI	GTATCC	1 cut(s)	287
BclI	TGATCA	1 cut(s)	727
BcoDI	GTCTC	4 cut(s)	276, 530, 883, 1232
BfaI	CTAG	4 cut(s)	374, 783, 1446, 2464
BfmI	CTRYAG	4 cut(s)	959, 1842, 2037, 2052
BfoI	RGCGCY	1 cut(s)	1423
BfrI	CTTAAG	1 cut(s)	1963
BfuAI	ACCTGC	1 cut(s)	2152
BfuI	GTATCC	1 cut(s)	287
BisI	GCNGC	8 cut(s)	354, 962, 1257, 1423, 1794, 1999, 2304, 2307
BlpI	GCTNAGC	1 cut(s)	2267
BlsI	GCNGC	8 cut(s)	355, 963, 1258, 1424, 1795, 2000, 2305, 2308
Bme1390I	CCNGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
Bme18I	GGWCC	1 cut(s)	2141
BmgBI	CACGTC	1 cut(s)	2155
BmgT120I	GGNCC	1 cut(s)	2141
BmiI	GGNNCC	3 cut(s)	626, 682, 2328
BmrFI	CCNGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
BmrI	ACTGGG	1 cut(s)	1139
BmsI	GCATC	7 cut(s)	340, 893, 907, 1528, 1627, 1713, 2361
BmuI	ACTGGG	1 cut(s)	1139
BpiI	GAAGAC	2 cut(s)	38, 1130
BpmI	CTGGAG	2 cut(s)	651, 777
Bpu10I	CCTNAGC	1 cut(s)	2357
Bpu1102I	GCTNAGC	1 cut(s)	2267
BpuEI	CTTGAG	2 cut(s)	248, 1540
Bsa29I	ATCGAT	1 cut(s)	1714
BsaAI	YACGTR	1 cut(s)	2174
BsaBI	GATNNNNATC	2 cut(s)	1221, 1542
BsaHI	GRCGYC	1 cut(s)	1410
BsaI	GGTCTC	1 cut(s)	276
BsaJI	CCNNGG	7 cut(s)	81, 271, 358, 530, 531, 628, 1940
BsaXI	ACNNNNNCTCC	2 cut(s)	624, 654
Bsc4I	CCNNNNNNNGG	6 cut(s)	87, 93, 431, 671, 677, 709
Bse118I	RCCGGY	1 cut(s)	2366
Bse1I	ACTGG	6 cut(s)	483, 563, 760, 1134, 1519, 1999
Bse3DI	GCAATG	3 cut(s)	1617, 1647, 2171
Bse8I	GATNNNNATC	2 cut(s)	1221, 1542
BseBI	CCWGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
BseCI	ATCGAT	1 cut(s)	1714
BseDI	CCNNGG	7 cut(s)	81, 271, 358, 530, 531, 628, 1940
BseGI	GGATG	6 cut(s)	487, 884, 1242, 1566, 2027, 2352
BseJI	GATNNNNATC	2 cut(s)	1221, 1542
BseLI	CCNNNNNNNGG	6 cut(s)	87, 93, 431, 671, 677, 709
BseMI	GCAATG	3 cut(s)	1617, 1647, 2171
BseMII	CTCAG	6 cut(s)	191, 894, 1374, 1587, 2281, 2403
BseNI	ACTGG	6 cut(s)	483, 563, 760, 1134, 1519, 1999
BseSI	GKGCMC	1 cut(s)	2173
BseXI	GCAGC	7 cut(s)	340, 973, 1243, 1780, 2010, 2290, 2293
BseYI	CCCAGC	2 cut(s)	1416, 1956
BsgI	GTGCAG	1 cut(s)	1673
Bsh1236I	CGCG	2 cut(s)	210, 2403
BshFI	GGCC	4 cut(s)	86, 335, 372, 1381
BshVI	ATCGAT	1 cut(s)	1714
BsiHKAI	GWGCWC	3 cut(s)	1303, 1459, 2173
BsiSI	CCGG	1 cut(s)	2367
BslFI	GGGAC	1 cut(s)	592
BslI	CCNNNNNNNGG	6 cut(s)	87, 93, 431, 671, 677, 709
BsmAI	GTCTC	4 cut(s)	276, 530, 883, 1232
BsmBI	CGTCTC	1 cut(s)	1232
BsmFI	GGGAC	1 cut(s)	592
BsmI	GAATGC	1 cut(s)	486
BsnI	GGCC	4 cut(s)	86, 335, 372, 1381
Bso31I	GGTCTC	1 cut(s)	276
Bsp1286I	GDGCHC	3 cut(s)	1303, 1459, 2173
Bsp143I	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
Bsp1720I	GCTNAGC	1 cut(s)	2267
BspACI	CCGC	8 cut(s)	466, 544, 703, 853, 1423, 1971, 2324, 2401
BspANI	GGCC	4 cut(s)	86, 335, 372, 1381
BspCNI	CTCAG	6 cut(s)	190, 893, 1375, 1588, 2280, 2404
BspDI	ATCGAT	1 cut(s)	1714
BspFNI	CGCG	2 cut(s)	210, 2403
BspHI	TCATGA	4 cut(s)	1002, 2013, 2113, 2149
BspLI	GGNNCC	3 cut(s)	626, 682, 2328
BspMAI	CTGCAG	1 cut(s)	963
BspMI	ACCTGC	1 cut(s)	2152
BspPI	GGATC	5 cut(s)	194, 1887, 2182, 2321, 2334
BspQI	GCTCTTC	2 cut(s)	1017, 1464
BspTI	CTTAAG	1 cut(s)	1963
BspTNI	GGTCTC	1 cut(s)	276
BsrBI	CCGCTC	1 cut(s)	544
BsrDI	GCAATG	3 cut(s)	1617, 1647, 2171
BsrFI	RCCGGY	1 cut(s)	2366
BsrI	ACTGG	6 cut(s)	483, 563, 760, 1134, 1519, 1999
BssAI	RCCGGY	1 cut(s)	2366
BssECI	CCNNGG	7 cut(s)	81, 271, 358, 530, 531, 628, 1940
BssMI	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
BssNI	GRCGYC	1 cut(s)	1410
BssSI	CACGAG	1 cut(s)	1670
BssT1I	CCWWGG	2 cut(s)	271, 358
Bst2BI	CACGAG	1 cut(s)	1670
Bst2UI	CCWGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
Bst6I	CTCTTC	6 cut(s)	582, 1017, 1185, 1196, 1464, 2411
BstACI	GRCGYC	1 cut(s)	1410
BstAFI	CTTAAG	1 cut(s)	1963
BstAPI	GCANNNNNTGC	3 cut(s)	1094, 1538, 2303
BstBAI	YACGTR	1 cut(s)	2174
BstC8I	GCNNGC	3 cut(s)	391, 1593, 1923
BstDEI	CTNAG	7 cut(s)	177, 880, 1383, 1596, 2267, 2357, 2412
BstDSI	CCRYGG	1 cut(s)	81
BstF5I	GGATG	6 cut(s)	487, 884, 1242, 1566, 2027, 2352
BstFNI	CGCG	2 cut(s)	210, 2403
BstH2I	RGCGCY	1 cut(s)	1423
BstHHI	GCGC	3 cut(s)	136, 210, 1422
BstKTI	GATC	9 cut(s)	151, 202, 730, 829, 1225, 1546, 1882, 2190, 2329
BstMAI	GTCTC	4 cut(s)	276, 530, 883, 1232
BstMBI	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
BstMWI	GCNNNNNNNGC	8 cut(s)	125, 499, 1094, 1538, 2303, 2315, 2358, 2382
BstNI	CCWGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
BstSCI	CCNGG	8 cut(s)	86, 468, 530, 628, 670, 1487, 1798, 1939
BstSFI	CTRYAG	4 cut(s)	959, 1842, 2037, 2052
BstSLI	GKGCMC	1 cut(s)	2173
BstUI	CGCG	2 cut(s)	210, 2403
BstV1I	GCAGC	7 cut(s)	340, 973, 1243, 1780, 2010, 2290, 2293
BstV2I	GAAGAC	2 cut(s)	38, 1130
BstX2I	RGATCY	3 cut(s)	199, 1879, 2326
BstXI	CCANNNNNNTGG	1 cut(s)	2337
BstYI	RGATCY	3 cut(s)	199, 1879, 2326
Bsu15I	ATCGAT	1 cut(s)	1714
BsuI	GTATCC	1 cut(s)	287
BsuRI	GGCC	4 cut(s)	86, 335, 372, 1381
BsuTUI	ATCGAT	1 cut(s)	1714
BtgI	CCRYGG	1 cut(s)	81
BtrI	CACGTC	1 cut(s)	2155
BtsCI	GGATG	6 cut(s)	487, 884, 1242, 1566, 2027, 2352
BtsI	GCAGTG	2 cut(s)	2159, 2392
BtsIMutI	CAGTG	4 cut(s)	145, 570, 2159, 2392
BveI	ACCTGC	1 cut(s)	2152
Cac8I	GCNNGC	3 cut(s)	391, 1593, 1923
CaiI	CAGNNNCTG	1 cut(s)	1946
CciI	TCATGA	4 cut(s)	1002, 2013, 2113, 2149
CfoI	GCGC	3 cut(s)	136, 210, 1422
Cfr10I	RCCGGY	1 cut(s)	2366
Cfr13I	GGNCC	1 cut(s)	2141
ClaI	ATCGAT	1 cut(s)	1714
CseI	GACGC	1 cut(s)	1399
CsiI	ACCWGGT	1 cut(s)	670
Csp6I	GTAC	7 cut(s)	76, 214, 817, 1328, 1600, 1675, 1763
CviQI	GTAC	7 cut(s)	76, 214, 817, 1328, 1600, 1675, 1763
DdeI	CTNAG	7 cut(s)	177, 880, 1383, 1596, 2267, 2357, 2412
DpnI	GATC	9 cut(s)	150, 201, 729, 828, 1224, 1545, 1881, 2189, 2328
DpnII	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
EaeI	YGGCCR	2 cut(s)	84, 333
Eam1104I	CTCTTC	6 cut(s)	582, 1017, 1185, 1196, 1464, 2411
EarI	CTCTTC	6 cut(s)	582, 1017, 1185, 1196, 1464, 2411
EciI	GGCGGA	1 cut(s)	455
Eco130I	CCWWGG	2 cut(s)	271, 358
Eco31I	GGTCTC	1 cut(s)	276
Eco47I	GGWCC	1 cut(s)	2141
Eco57I	CTGAAG	3 cut(s)	32, 1119, 1947
Eco72I	CACGTG	1 cut(s)	2174
EcoO109I	RGGNCCY	1 cut(s)	2141
EcoRII	CCWGG	8 cut(s)	86, 468, 530, 628, 670, 1487, 1798, 1939
EcoT14I	CCWWGG	2 cut(s)	271, 358
EcoT22I	ATGCAT	1 cut(s)	1400
ErhI	CCWWGG	2 cut(s)	271, 358
Esp3I	CGTCTC	1 cut(s)	1232
FaqI	GGGAC	1 cut(s)	592
FauI	CCCGC	1 cut(s)	537
FbaI	TGATCA	1 cut(s)	727
FblI	GTMKAC	2 cut(s)	1017, 2051
Fnu4HI	GCNGC	8 cut(s)	354, 962, 1257, 1423, 1794, 1999, 2304, 2307
FokI	GGATG	6 cut(s)	494, 871, 1249, 1573, 2034, 2339
Fsp4HI	GCNGC	8 cut(s)	354, 962, 1257, 1423, 1794, 1999, 2304, 2307
FspBI	CTAG	4 cut(s)	374, 783, 1446, 2464
GlaI	GCGC	3 cut(s)	135, 209, 1421
GluI	GCNGC	8 cut(s)	354, 962, 1257, 1423, 1794, 1999, 2304, 2307
GsaI	CCCAGC	2 cut(s)	1420, 1960
GsuI	CTGGAG	2 cut(s)	651, 777
HaeII	RGCGCY	1 cut(s)	1423
HaeIII	GGCC	4 cut(s)	86, 335, 372, 1381
HapII	CCGG	1 cut(s)	2367
HgaI	GACGC	1 cut(s)	1399
HhaI	GCGC	3 cut(s)	136, 210, 1422
Hin1I	GRCGYC	1 cut(s)	1410
Hin6I	GCGC	3 cut(s)	134, 208, 1420
HinP1I	GCGC	3 cut(s)	134, 208, 1420
HincII	GTYRAC	4 cut(s)	1018, 1504, 1579, 1748
HindII	GTYRAC	4 cut(s)	1018, 1504, 1579, 1748
HindIII	AAGCTT	3 cut(s)	117, 744, 1044
HinfI	GANTC	6 cut(s)	401, 526, 1492, 1744, 2110, 2442
HpaI	GTTAAC	1 cut(s)	1579
HpaII	CCGG	1 cut(s)	2367
HphI	GGTGA	4 cut(s)	968, 1405, 1447, 2261
Hpy99I	CGWCG	3 cut(s)	1022, 1874, 2462
HpyAV	CCTTC	8 cut(s)	46, 338, 838, 1094, 1517, 1567, 1618, 2457
HpyCH4IV	ACGT	5 cut(s)	69, 733, 1872, 2154, 2173
HpyF10VI	GCNNNNNNNGC	8 cut(s)	125, 499, 1094, 1538, 2303, 2315, 2358, 2382
HpyF3I	CTNAG	7 cut(s)	177, 880, 1383, 1596, 2267, 2357, 2412
HpySE526I	ACGT	5 cut(s)	69, 733, 1872, 2154, 2173
Hsp92I	GRCGYC	1 cut(s)	1410
HspAI	GCGC	3 cut(s)	134, 208, 1420
Ksp22I	TGATCA	1 cut(s)	727
KspAI	GTTAAC	1 cut(s)	1579
Kzo9I	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
LguI	GCTCTTC	2 cut(s)	1017, 1464
LmnI	GCTCC	2 cut(s)	1801, 2283
Lsp1109I	GCAGC	7 cut(s)	340, 973, 1243, 1780, 2010, 2290, 2293
LweI	GCATC	7 cut(s)	340, 893, 907, 1528, 1627, 1713, 2361
MabI	ACCWGGT	1 cut(s)	670
MaeI	CTAG	4 cut(s)	374, 783, 1446, 2464
MaeII	ACGT	5 cut(s)	69, 733, 1872, 2154, 2173
MaeIII	GTNAC	4 cut(s)	553, 674, 1411, 2387
MalI	GATC	9 cut(s)	150, 201, 729, 828, 1224, 1545, 1881, 2189, 2328
MbiI	CCGCTC	1 cut(s)	544
MboI	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
MfeI	CAATTG	1 cut(s)	1685
MflI	RGATCY	3 cut(s)	199, 1879, 2326
MhlI	GDGCHC	3 cut(s)	1303, 1459, 2173
MlsI	TGGCCA	1 cut(s)	86
MluNI	TGGCCA	1 cut(s)	86
MlyI	GAGTC	1 cut(s)	1753
MmeI	TCCRAC	1 cut(s)	1086
Mox20I	TGGCCA	1 cut(s)	86
Mph1103I	ATGCAT	1 cut(s)	1400
MscI	TGGCCA	1 cut(s)	86
MseI	TTAA	9 cut(s)	302, 750, 857, 1173, 1343, 1569, 1578, 1964, 2180
MslI	CAYNNNNRTG	3 cut(s)	1007, 1716, 2164
Msp20I	TGGCCA	1 cut(s)	86
MspA1I	CMGCKG	1 cut(s)	1425
MspCI	CTTAAG	1 cut(s)	1963
MspI	CCGG	1 cut(s)	2367
MspR9I	CCNGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
MunI	CAATTG	1 cut(s)	1685
Mva1269I	GAATGC	1 cut(s)	486
MvaI	CCWGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
MvnI	CGCG	2 cut(s)	210, 2403
MwoI	GCNNNNNNNGC	8 cut(s)	125, 499, 1094, 1538, 2303, 2315, 2358, 2382
NdeII	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
NlaIV	GGNNCC	3 cut(s)	626, 682, 2328
NmeAIII	GCCGAG	1 cut(s)	361
NmuCI	GTSAC	2 cut(s)	1411, 2387
NsiI	ATGCAT	1 cut(s)	1400
PagI	TCATGA	4 cut(s)	1002, 2013, 2113, 2149
PasI	CCCWGGG	1 cut(s)	531
PciSI	GCTCTTC	2 cut(s)	1017, 1464
PctI	GAATGC	1 cut(s)	486
PfeI	GAWTC	5 cut(s)	401, 526, 1492, 2110, 2442
PkrI	GCNGC	8 cut(s)	355, 963, 1258, 1424, 1795, 2000, 2305, 2308
PleI	GAGTC	1 cut(s)	1752
PmaCI	CACGTG	1 cut(s)	2174
PmlI	CACGTG	1 cut(s)	2174
PpsI	GAGTC	1 cut(s)	1752
Ppu21I	YACGTR	1 cut(s)	2174
PpuMI	RGGWCCY	1 cut(s)	2141
PsiI	TTATAA	1 cut(s)	1911
Psp5II	RGGWCCY	1 cut(s)	2141
Psp6I	CCWGG	8 cut(s)	86, 468, 530, 628, 670, 1487, 1798, 1939
PspCI	CACGTG	1 cut(s)	2174
PspFI	CCCAGC	2 cut(s)	1416, 1956
PspGI	CCWGG	8 cut(s)	86, 468, 530, 628, 670, 1487, 1798, 1939
PspN4I	GGNNCC	3 cut(s)	626, 682, 2328
PspPI	GGNCC	1 cut(s)	2141
PspPPI	RGGWCCY	1 cut(s)	2141
PstI	CTGCAG	1 cut(s)	963
PstNI	CAGNNNCTG	1 cut(s)	1946
PsuI	RGATCY	3 cut(s)	199, 1879, 2326
RsaI	GTAC	7 cut(s)	77, 215, 818, 1329, 1601, 1676, 1764
RsaNI	GTAC	7 cut(s)	76, 214, 817, 1328, 1600, 1675, 1763
RseI	CAYNNNNRTG	3 cut(s)	1007, 1716, 2164
SalI	GTCGAC	1 cut(s)	1016
SapI	GCTCTTC	2 cut(s)	1017, 1464
SaqAI	TTAA	9 cut(s)	302, 750, 857, 1173, 1343, 1569, 1578, 1964, 2180
SatI	GCNGC	8 cut(s)	354, 962, 1257, 1423, 1794, 1999, 2304, 2307
Sau3AI	GATC	9 cut(s)	148, 199, 727, 826, 1222, 1543, 1879, 2187, 2326
Sau96I	GGNCC	1 cut(s)	2141
SchI	GAGTC	1 cut(s)	1753
ScrFI	CCNGG	8 cut(s)	88, 470, 532, 630, 672, 1489, 1800, 1941
SduI	GDGCHC	3 cut(s)	1303, 1459, 2173
SexAI	ACCWGGT	1 cut(s)	670
SfaNI	GCATC	7 cut(s)	340, 893, 907, 1528, 1627, 1713, 2361
SfcI	CTRYAG	4 cut(s)	959, 1842, 2037, 2052
SinI	GGWCC	1 cut(s)	2141
SmiMI	CAYNNNNRTG	3 cut(s)	1007, 1716, 2164
SmlI	CTYRAG	3 cut(s)	227, 1519, 1963
SmoI	CTYRAG	3 cut(s)	227, 1519, 1963
SsiI	CCGC	8 cut(s)	466, 544, 703, 853, 1423, 1971, 2324, 2401
SspMI	CTAG	4 cut(s)	374, 783, 1446, 2464
StyD4I	CCNGG	8 cut(s)	86, 468, 530, 628, 670, 1487, 1798, 1939
StyI	CCWWGG	2 cut(s)	271, 358
TaiI	ACGT	5 cut(s)	72, 736, 1875, 2157, 2176
TaqI	TCGA	7 cut(s)	92, 254, 996, 1017, 1188, 1714, 2457
TatI	WGTACW	5 cut(s)	75, 213, 1327, 1599, 1674
TauI	GCSGC	1 cut(s)	1425
TfiI	GAWTC	5 cut(s)	401, 526, 1492, 2110, 2442
Tru1I	TTAA	9 cut(s)	302, 750, 857, 1173, 1343, 1569, 1578, 1964, 2180
Tru9I	TTAA	9 cut(s)	302, 750, 857, 1173, 1343, 1569, 1578, 1964, 2180
TscAI	CASTG	4 cut(s)	145, 570, 2166, 2392
TseFI	GTSAC	2 cut(s)	1411, 2387
TseI	GCWGC	7 cut(s)	353, 961, 1256, 1793, 1998, 2303, 2306
Tsp45I	GTSAC	2 cut(s)	1411, 2387
TspGWI	ACGGA	4 cut(s)	618, 693, 919, 2034
TspRI	CASTG	4 cut(s)	145, 570, 2166, 2392
Vha464I	CTTAAG	1 cut(s)	1963
VneI	GTGCAC	1 cut(s)	2169
VpaK11BI	GGWCC	1 cut(s)	2141
XapI	RAATTY	3 cut(s)	938, 1388, 2006
XbaI	TCTAGA	1 cut(s)	782
XmiI	GTMKAC	2 cut(s)	1017, 2051
XspI	CTAG	4 cut(s)	374, 783, 1446, 2464
Zsp2I	ATGCAT	1 cut(s)	1400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.