Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0013293

Physical Location & Seq

Genomic Coordinates Forward (+)

236110 .. 240473

Gene Structure 4364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGGCCCATACATCCACATGAACGGGTCATCGAGTGTGGTGCGAACGATTTCAGCTTCTCCATCGGTTTTACCAAATGGAAATCCACCCAGTAACAATATGTCGTCCTTCTTCCCTTCTCCAAGTGATGAAGCTTCTAATTCCTCAGATGCATTTGCACCAGTCCCGAGCTCTGGCCAGTTCGTTGGCAAAGTTTCATCCGCCAACACCAACTCCGACCGTCAGTGCGTTAACAACCCCCACCTCACAACCTGGTTCAACAAATACGTCGACAAAAACGATGTCGCCTCCTGGAACTCCGTCATTGCCGACTTGGCCCGGAGCGGCGACTCCCTTGAAGCCCTCCGGGCATTTTCGTCGATGCGAAAGCTCTCCCTCAGACCAAACCGCTCCTCCTTCCCCTACGCCATCAAATCCTGCTCGGCTTTGCTGGACCTTCACTCCGGCGAGCAAGCTCACCAGCAGGCGTTGGTCTTCGGCTTTGCGTCCGACCTCTTTGTCTCCTCTGCCCTCATCGATATGTACTCCAGGTGCGGTCGATTGACGGATGCATGGAAACTGTTCGATACAATTCCTTACAGAAATGTGGTTTCTTGGACATCCATGATCACCGGGTGTGTTCAAAACGACGCCGCCTGCCAAGCCTTGTCTCTCTTTAAAGAGTTGTTGATCGATCTGCCACTGGAAATTGACAATGAGGATGTTTCTTTAGATCCTGTTGTTCTGGTTTCTGTTCTGTCGGCTTGTTCTCGCGCATCGAGTAAGGGACTTGCCCAAAGTGTTCATGGGTTGGTGGTTAAGAGAGGTTTCGATGGGGATTTACGGGTAGGGAATACTTTGATGGATGCATATGCCAAATGCGGCGAGCTCGGTCTTGTTAGAAAGGTGTTTGATGGAATGTCCCAAAAGGATTTGGTTTCTTGGAACTCCATGATTGCAACTTATGCACAGAGTGGATTATCTTCCGAGGCATGGCAAGTCTTCTATGGGATGACAAAGGATGGTGACATCTGCTACAATGCGGTGACATTGTCTGCTTTGTTATTAGCATGTGCACATGCTGGGCCTCTGCTAGTTGGGAAGTCTATACATGATCAGGTTCTGAAAAAGGGCTTGGAAGAGAATGTGATAGTGTCTACCTCTATTATCGACATGTACTGCAAATGTGGTAGAGTTGACTTGGCAAGAAAGGCATTTGATTGCATGAAGGAGAAGAATGTTAGGACATGGACCGCCATGATTGCAGGTTATGGAATGCACGGCCGTGCCAAAGAAGCATTGGAGGTCTTCTATAAGATGATAAGAGATGGTGTGAAACCAAATTACATAACATTTGTGTCACTTCTAAATGCTTGCAGCCATGCTGGTCTATTAGAAGAAGGTTGGTATTGGTTTAATAACATGAGCCACGAATACGGTGTAGAACCTGGAATTGAGCACTATGGGTGCATGGTTGATCGTTCTTGGACGTTCCGGGTACACAAAAATGTGACATTTGCAGAGATTTCTGCGAGGAAACTGTTTGAGCTCGACCCTCATAATTGTGGGTACTACATCTTGCTTTCAAATATATATGCCGATGCTGGGCGATGGGAAGATGTTGAGAGGATGAGAATACTGATGAAGAATCGTGGGTTGGTTAAACCTCCTGGATTCAGTTTGGTTGAACTGAGAGGTATTGTGCATTTATTTTTGGTTGGAGACAGAGAGCATCCTCAGCATGAGAAGATTTACGAGTATCTGGAAAACCTGACAATCAAGCTGCAAGAGGTTGGCTATGCACCCAATATCAGTTCAGTTCTTCATGATGTTGATGAGGAAGAGAAGGAAATGGTCCTAAGAGTACATAGTGAGAAGCTGGCTGTTGCCTTCGGAATCATGAATTCTGTACCTGGTGCAACGATTCAGATAATCAAGAATCTCCGAGTTTGCACCGATTGTCATACTGTTATTAAGTTGATTACAAAGGTTGTTGATCGGGAAATTGTGGTCAGAGATTCAAAGCGGTTTCATCACTTCAGGGATGGGTTGTGTTCTTGTGGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

685

Amino Acids

76.06

Weight (kDa)

6.41

Isoelectric Point (pI)

39.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	405 - 453	1.8e-11	PPR repeat family
PPR_3	PF13812	406 - 452	2.5e-07	Pentatricopeptide repeat domain
PPR	PF01535	409 - 438	1.4e-08	PPR repeat
E_motif	PF20431	494 - 556	6.5e-21	E motif
DYW_deaminase	PF14432	592 - 684	3.7e-43	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26782
fragaria_vesca	FvH4_6g54200 FvH4_6g54200 FvH4_6g54200
malus_domestica	MD09G1004300.v1.1 MD17G1007800.v1.1
prunus_persica	Prupe.3G312400_v2.0.a1
pyrus_communis	pycom111g00310 pycom17g00330
rosa_chinensis	RchiOBHm_Chr2g0176381
rosa_laevigata	RLG00000022408
rosa_multiflora	Rmu_co8497233.1_g000001 Rmu_sc0009140.1_g000003
rosa_roxburghii	Rroxscaffold_2G00076480
rosa_rugosa	Rorug02G0593800
rosa_samantha	Rh2BG683700 Rh2CG646400
rosa_wichuraiana	Rw2G055130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	497
Acc36I	ACCTGC	1 cut(s)	1235
AccBSI	CCGCTC	2 cut(s)	324, 390
AccI	GTMKAC	2 cut(s)	270, 1136
AccII	CGCG	1 cut(s)	753
AciI	CCGC	9 cut(s)	201, 324, 388, 534, 633, 861, 1022, 1233, 2005
AclWI	GGATC	1 cut(s)	707
AcoI	YGGCCR	2 cut(s)	175, 1261
AcsI	RAATTY	1 cut(s)	1882
AcuI	CTGAAG	1 cut(s)	2002
AcyI	GRCGYC	1 cut(s)	630
AdeI	CACNNNGTG	2 cut(s)	615, 953
AfaI	GTAC	6 cut(s)	524, 1157, 1479, 1550, 1845, 1890
AfiI	CCNNNNNNNGG	3 cut(s)	173, 972, 1584
AflIII	ACRYGT	1 cut(s)	1152
AgsI	TTSAA	6 cut(s)	259, 338, 623, 1566, 1667, 2001
AjnI	CCWGG	6 cut(s)	251, 290, 527, 1426, 1648, 1891
AjuI	GAANNNNNNNTTGG	4 cut(s)	1097, 1129, 1619, 1651
AleI	CACNNNNGTG	1 cut(s)	1263
AluBI	AGCT	9 cut(s)	56, 134, 171, 370, 455, 868, 1528, 1762, 1858
AluI	AGCT	9 cut(s)	56, 134, 171, 370, 455, 868, 1528, 1762, 1858
Alw21I	GWGCWC	5 cut(s)	173, 870, 1057, 1440, 1530
Alw26I	GTCTC	3 cut(s)	505, 654, 1695
Alw44I	GTGCAC	1 cut(s)	1053
AlwI	GGATC	1 cut(s)	707
AlwNI	CAGNNNCTG	1 cut(s)	1102
Ama87I	CYCGRG	1 cut(s)	166
AoxI	GGCC	5 cut(s)	4, 175, 315, 1064, 1261
ApaI	GGGCCC	1 cut(s)	8
ApaLI	GTGCAC	1 cut(s)	1053
ApeKI	GCWGC	2 cut(s)	1356, 1762
ApoI	RAATTY	1 cut(s)	1882
ArsI	GACNNNNNNTTYG	2 cut(s)	267, 299
Asp700I	GAANNNNTTC	2 cut(s)	49, 560
AspLEI	GCGC	1 cut(s)	755
AspS9I	GGNCC	7 cut(s)	4, 5, 316, 433, 1064, 1230, 1834
AsuC2I	CCSGG	4 cut(s)	319, 347, 613, 1475
AsuHPI	GGTGA	4 cut(s)	449, 601, 1016, 1036
AvaI	CYCGRG	1 cut(s)	166
AvaII	GGWCC	3 cut(s)	433, 1230, 1834
BaeGI	GKGCMC	2 cut(s)	8, 1057
BalI	TGGCCA	1 cut(s)	177
BanII	GRGCYC	4 cut(s)	8, 173, 870, 1530
BbsI	GAAGAC	3 cut(s)	466, 973, 1279
Bbv12I	GWGCWC	5 cut(s)	173, 870, 1057, 1440, 1530
BbvCI	CCTCAGC	1 cut(s)	1716
BbvI	GCAGC	2 cut(s)	1368, 1749
BccI	CCATC	9 cut(s)	70, 416, 806, 835, 887, 995, 1301, 1584, 2018
BceAI	ACGGC	2 cut(s)	1248, 1276
BcgI	CGANNNNNNTGC	4 cut(s)	22, 56, 339, 373
BciT130I	CCWGG	6 cut(s)	253, 292, 529, 1428, 1650, 1893
BclI	TGATCA	2 cut(s)	606, 1093
BcnI	CCSGG	4 cut(s)	319, 347, 613, 1475
BcoDI	GTCTC	3 cut(s)	505, 654, 1695
BfaI	CTAG	1 cut(s)	1073
BfuAI	ACCTGC	1 cut(s)	1235
BglI	GCCNNNNNGGC	2 cut(s)	314, 347
BisI	GCNGC	5 cut(s)	325, 633, 862, 1357, 1763
BlsI	GCNGC	5 cut(s)	326, 634, 863, 1358, 1764
Bme18I	GGWCC	3 cut(s)	433, 1230, 1834
BmeT110I	CYCGRG	1 cut(s)	166
BmgT120I	GGNCC	7 cut(s)	4, 5, 316, 433, 1064, 1230, 1834
BmiI	GGNNCC	1 cut(s)	6
BmrI	ACTGGG	1 cut(s)	84
BmsI	GCATC	7 cut(s)	139, 351, 538, 764, 835, 1570, 1720
BmuI	ACTGGG	1 cut(s)	84
BpiI	GAAGAC	3 cut(s)	466, 973, 1279
BpmI	CTGGAG	1 cut(s)	511
Bpu10I	CCTNAGC	1 cut(s)	1716
BpuMI	CCSGG	4 cut(s)	319, 347, 613, 1475
Bsa29I	ATCGAT	2 cut(s)	516, 672
BsaHI	GRCGYC	1 cut(s)	630
BsaJI	CCNNGG	1 cut(s)	966
BsaXI	ACNNNNNCTCC	6 cut(s)	197, 227, 377, 407, 425, 455
Bsc4I	CCNNNNNNNGG	3 cut(s)	173, 972, 1584
Bse1I	ACTGG	4 cut(s)	90, 161, 178, 687
Bse3DI	GCAATG	1 cut(s)	303
BseBI	CCWGG	6 cut(s)	253, 292, 529, 1428, 1650, 1893
BseCI	ATCGAT	2 cut(s)	516, 672
BseDI	CCNNGG	1 cut(s)	966
BseLI	CCNNNNNNNGG	3 cut(s)	173, 972, 1584
BseMI	GCAATG	1 cut(s)	303
BseMII	CTCAG	4 cut(s)	159, 391, 1661, 1730
BseNI	ACTGG	4 cut(s)	90, 161, 178, 687
BseRI	GAGGAG	2 cut(s)	382, 493
BseSI	GKGCMC	2 cut(s)	8, 1057
BseX3I	CGGCCG	1 cut(s)	1261
BseXI	GCAGC	2 cut(s)	1368, 1749
BseYI	CCCAGC	2 cut(s)	1061, 1583
Bsh1236I	CGCG	1 cut(s)	753
Bsh1285I	CGRYCG	3 cut(s)	220, 538, 1264
BshFI	GGCC	5 cut(s)	6, 177, 317, 1066, 1263
BshVI	ATCGAT	2 cut(s)	516, 672
BsiEI	CGRYCG	3 cut(s)	220, 538, 1264
BsiHKAI	GWGCWC	5 cut(s)	173, 870, 1057, 1440, 1530
BsiHKCI	CYCGRG	1 cut(s)	166
BsiSI	CCGG	5 cut(s)	319, 346, 444, 612, 1474
BslFI	GGGAC	3 cut(s)	149, 780, 886
BslI	CCNNNNNNNGG	3 cut(s)	173, 972, 1584
BsmAI	GTCTC	3 cut(s)	505, 654, 1695
BsmFI	GGGAC	3 cut(s)	149, 780, 886
BsmI	GAATGC	1 cut(s)	1260
BsnI	GGCC	5 cut(s)	6, 177, 317, 1066, 1263
BsoBI	CYCGRG	1 cut(s)	166
Bsp120I	GGGCCC	1 cut(s)	4
Bsp1286I	GDGCHC	6 cut(s)	8, 173, 870, 1057, 1440, 1530
Bsp143I	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
BspACI	CCGC	9 cut(s)	201, 324, 388, 534, 633, 861, 1022, 1233, 2005
BspANI	GGCC	5 cut(s)	6, 177, 317, 1066, 1263
BspCNI	CTCAG	4 cut(s)	158, 390, 1662, 1729
BspDI	ATCGAT	2 cut(s)	516, 672
BspFNI	CGCG	1 cut(s)	753
BspHI	TCATGA	2 cut(s)	1804, 1878
BspLI	GGNNCC	1 cut(s)	6
BspMI	ACCTGC	1 cut(s)	1235
BspPI	GGATC	1 cut(s)	707
BsrBI	CCGCTC	2 cut(s)	324, 390
BsrDI	GCAATG	1 cut(s)	303
BsrI	ACTGG	4 cut(s)	90, 161, 178, 687
BssECI	CCNNGG	1 cut(s)	966
BssMI	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
BssNI	GRCGYC	1 cut(s)	630
Bst2UI	CCWGG	6 cut(s)	253, 292, 529, 1428, 1650, 1893
Bst4CI	ACNGT	5 cut(s)	221, 561, 1418, 1521, 1948
Bst6I	CTCTTC	2 cut(s)	1113, 1815
BstACI	GRCGYC	1 cut(s)	630
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstC8I	GCNNGC	7 cut(s)	449, 453, 465, 637, 866, 1354, 1860
BstDEI	CTNAG	5 cut(s)	145, 377, 1670, 1716, 1838
BstFNI	CGCG	1 cut(s)	753
BstHHI	GCGC	1 cut(s)	755
BstKTI	GATC	7 cut(s)	609, 672, 676, 715, 1096, 1459, 1978
BstMAI	GTCTC	3 cut(s)	505, 654, 1695
BstMBI	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
BstMCI	CGRYCG	3 cut(s)	220, 538, 1264
BstMWI	GCNNNNNNNGC	8 cut(s)	314, 347, 641, 944, 1190, 1241, 1274, 1717
BstNI	CCWGG	6 cut(s)	253, 292, 529, 1428, 1650, 1893
BstNSI	RCATGY	3 cut(s)	1053, 1061, 1156
BstSLI	GKGCMC	2 cut(s)	8, 1057
BstUI	CGCG	1 cut(s)	753
BstV1I	GCAGC	2 cut(s)	1368, 1749
BstV2I	GAAGAC	3 cut(s)	466, 973, 1279
BstX2I	RGATCY	1 cut(s)	712
BstXI	CCANNNNNNTGG	1 cut(s)	185
BstYI	RGATCY	1 cut(s)	712
BstZI	CGGCCG	1 cut(s)	1261
Bsu15I	ATCGAT	2 cut(s)	516, 672
BsuRI	GGCC	5 cut(s)	6, 177, 317, 1066, 1263
BsuTUI	ATCGAT	2 cut(s)	516, 672
BtgZI	GCGATG	1 cut(s)	1603
BtsIMutI	CAGTG	2 cut(s)	230, 680
BveI	ACCTGC	1 cut(s)	1235
Cac8I	GCNNGC	7 cut(s)	449, 453, 465, 637, 866, 1354, 1860
CaiI	CAGNNNCTG	1 cut(s)	1102
CciI	TCATGA	2 cut(s)	1804, 1878
CfoI	GCGC	1 cut(s)	755
Cfr13I	GGNCC	7 cut(s)	4, 5, 316, 433, 1064, 1230, 1834
ClaI	ATCGAT	2 cut(s)	516, 672
CseI	GACGC	2 cut(s)	474, 638
CsiI	ACCWGGT	2 cut(s)	251, 1891
Csp6I	GTAC	6 cut(s)	523, 1156, 1478, 1549, 1844, 1889
CviQI	GTAC	6 cut(s)	523, 1156, 1478, 1549, 1844, 1889
DdeI	CTNAG	5 cut(s)	145, 377, 1670, 1716, 1838
DpnI	GATC	7 cut(s)	608, 671, 675, 714, 1095, 1458, 1977
DpnII	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
DraI	TTTAAA	1 cut(s)	658
DraIII	CACNNNGTG	2 cut(s)	615, 953
DrdI	GACNNNNNNGTC	1 cut(s)	497
DseDI	GACNNNNNNGTC	1 cut(s)	497
EaeI	YGGCCR	2 cut(s)	175, 1261
EagI	CGGCCG	1 cut(s)	1261
Eam1104I	CTCTTC	2 cut(s)	1113, 1815
EarI	CTCTTC	2 cut(s)	1113, 1815
EciI	GGCGGA	1 cut(s)	190
Ecl136II	GAGCTC	3 cut(s)	171, 868, 1528
EclXI	CGGCCG	1 cut(s)	1261
Eco24I	GRGCYC	4 cut(s)	8, 173, 870, 1530
Eco47I	GGWCC	3 cut(s)	433, 1230, 1834
Eco52I	CGGCCG	1 cut(s)	1261
Eco53kI	GAGCTC	3 cut(s)	171, 868, 1528
Eco57I	CTGAAG	1 cut(s)	2002
Eco88I	CYCGRG	1 cut(s)	166
EcoICRI	GAGCTC	3 cut(s)	171, 868, 1528
EcoRI	GAATTC	1 cut(s)	1882
EcoRII	CCWGG	6 cut(s)	251, 290, 527, 1426, 1648, 1891
EcoT22I	ATGCAT	3 cut(s)	154, 553, 850
EcoT38I	GRGCYC	4 cut(s)	8, 173, 870, 1530
FaqI	GGGAC	3 cut(s)	149, 780, 886
FauNDI	CATATG	1 cut(s)	850
FbaI	TGATCA	2 cut(s)	606, 1093
FblI	GTMKAC	2 cut(s)	270, 1136
Fnu4HI	GCNGC	5 cut(s)	325, 633, 862, 1357, 1763
FriOI	GRGCYC	4 cut(s)	8, 173, 870, 1530
Fsp4HI	GCNGC	5 cut(s)	325, 633, 862, 1357, 1763
FspBI	CTAG	1 cut(s)	1073
GlaI	GCGC	1 cut(s)	754
GluI	GCNGC	5 cut(s)	325, 633, 862, 1357, 1763
GsaI	CCCAGC	2 cut(s)	1065, 1587
GsuI	CTGGAG	1 cut(s)	511
HaeIII	GGCC	5 cut(s)	6, 177, 317, 1066, 1263
HapII	CCGG	5 cut(s)	319, 346, 444, 612, 1474
HgaI	GACGC	2 cut(s)	474, 638
HhaI	GCGC	1 cut(s)	755
Hin1I	GRCGYC	1 cut(s)	630
Hin6I	GCGC	1 cut(s)	753
HinP1I	GCGC	1 cut(s)	753
HincII	GTYRAC	3 cut(s)	232, 271, 1177
HindII	GTYRAC	3 cut(s)	232, 271, 1177
HindIII	AAGCTT	1 cut(s)	132
HinfI	GANTC	7 cut(s)	329, 1627, 1653, 1875, 1903, 1918, 1997
HpaI	GTTAAC	1 cut(s)	232
HpaII	CCGG	5 cut(s)	319, 346, 444, 612, 1474
HphI	GGTGA	4 cut(s)	449, 601, 1016, 1036
Hpy166II	GTNNAC	6 cut(s)	232, 271, 1055, 1137, 1177, 1480
Hpy188III	TCNNGA	6 cut(s)	166, 1742, 1805, 1879, 1915, 1979
Hpy8I	GTNNAC	6 cut(s)	232, 271, 1055, 1137, 1177, 1480
Hpy99I	CGWCG	3 cut(s)	272, 361, 632
HpyAV	CCTTC	8 cut(s)	118, 126, 406, 446, 1201, 1373, 1819, 1879
HpyCH4III	ACNGT	5 cut(s)	221, 561, 1418, 1521, 1948
HpyCH4IV	ACGT	2 cut(s)	267, 1469
HpyF10VI	GCNNNNNNNGC	8 cut(s)	314, 347, 641, 944, 1190, 1241, 1274, 1717
HpyF3I	CTNAG	5 cut(s)	145, 377, 1670, 1716, 1838
HpySE526I	ACGT	2 cut(s)	267, 1469
Hsp92I	GRCGYC	1 cut(s)	630
HspAI	GCGC	1 cut(s)	753
Ksp22I	TGATCA	2 cut(s)	606, 1093
KspAI	GTTAAC	1 cut(s)	232
Kzo9I	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
LmnI	GCTCC	2 cut(s)	321, 395
Lsp1109I	GCAGC	2 cut(s)	1368, 1749
LweI	GCATC	7 cut(s)	139, 351, 538, 764, 835, 1570, 1720
MabI	ACCWGGT	2 cut(s)	251, 1891
MaeI	CTAG	1 cut(s)	1073
MaeII	ACGT	2 cut(s)	267, 1469
MaeIII	GTNAC	5 cut(s)	92, 1004, 1024, 1338, 1489
MalI	GATC	7 cut(s)	608, 671, 675, 714, 1095, 1458, 1977
MbiI	CCGCTC	2 cut(s)	324, 390
MboI	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
MflI	RGATCY	1 cut(s)	712
MhlI	GDGCHC	6 cut(s)	8, 173, 870, 1057, 1440, 1530
MlsI	TGGCCA	1 cut(s)	177
MluCI	AATT	8 cut(s)	139, 570, 687, 1321, 1431, 1540, 1882, 1983
MluNI	TGGCCA	1 cut(s)	177
MlyI	GAGTC	1 cut(s)	323
MmeI	TCCRAC	3 cut(s)	240, 513, 1678
Mox20I	TGGCCA	1 cut(s)	177
Mph1103I	ATGCAT	3 cut(s)	154, 553, 850
MroXI	GAANNNNTTC	2 cut(s)	49, 560
MscI	TGGCCA	1 cut(s)	177
MseI	TTAA	6 cut(s)	231, 657, 798, 1395, 1641, 1953
MslI	CAYNNNNRTG	5 cut(s)	17, 518, 1263, 1485, 1542
Msp20I	TGGCCA	1 cut(s)	177
MspI	CCGG	5 cut(s)	319, 346, 444, 612, 1474
Mva1269I	GAATGC	1 cut(s)	1260
MvaI	CCWGG	6 cut(s)	253, 292, 529, 1428, 1650, 1893
MvnI	CGCG	1 cut(s)	753
MwoI	GCNNNNNNNGC	8 cut(s)	314, 347, 641, 944, 1190, 1241, 1274, 1717
NciI	CCSGG	4 cut(s)	319, 347, 613, 1475
NdeI	CATATG	1 cut(s)	850
NdeII	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
NlaIV	GGNNCC	1 cut(s)	6
NmeAIII	GCCGAG	1 cut(s)	401
NmuCI	GTSAC	4 cut(s)	1004, 1024, 1338, 1489
NsiI	ATGCAT	3 cut(s)	154, 553, 850
NspI	RCATGY	3 cut(s)	1053, 1061, 1156
OliI	CACNNNNGTG	1 cut(s)	1263
PagI	TCATGA	2 cut(s)	1804, 1878
PciI	ACATGT	1 cut(s)	1152
PcsI	WCGNNNNNNNCGW	1 cut(s)	276
PctI	GAATGC	1 cut(s)	1260
PdmI	GAANNNNTTC	2 cut(s)	49, 560
PfeI	GAWTC	6 cut(s)	1627, 1653, 1875, 1903, 1918, 1997
PflFI	GACNNNGTC	1 cut(s)	1030
PfoI	TCCNGGA	2 cut(s)	290, 1648
PkrI	GCNGC	5 cut(s)	326, 634, 863, 1358, 1764
PleI	GAGTC	1 cut(s)	323
PpsI	GAGTC	1 cut(s)	323
PscI	ACATGT	1 cut(s)	1152
Psp124BI	GAGCTC	3 cut(s)	173, 870, 1530
Psp6I	CCWGG	6 cut(s)	251, 290, 527, 1426, 1648, 1891
PspFI	CCCAGC	2 cut(s)	1061, 1583
PspGI	CCWGG	6 cut(s)	251, 290, 527, 1426, 1648, 1891
PspN4I	GGNNCC	1 cut(s)	6
PspOMI	GGGCCC	1 cut(s)	4
PspPI	GGNCC	7 cut(s)	4, 5, 316, 433, 1064, 1230, 1834
PstNI	CAGNNNCTG	1 cut(s)	1102
PsuI	RGATCY	1 cut(s)	712
PsyI	GACNNNGTC	1 cut(s)	1030
RsaI	GTAC	6 cut(s)	524, 1157, 1479, 1550, 1845, 1890
RsaNI	GTAC	6 cut(s)	523, 1156, 1478, 1549, 1844, 1889
RseI	CAYNNNNRTG	5 cut(s)	17, 518, 1263, 1485, 1542
SacI	GAGCTC	3 cut(s)	173, 870, 1530
SalI	GTCGAC	1 cut(s)	269
SaqAI	TTAA	6 cut(s)	231, 657, 798, 1395, 1641, 1953
SatI	GCNGC	5 cut(s)	325, 633, 862, 1357, 1763
Sau3AI	GATC	7 cut(s)	606, 669, 673, 712, 1093, 1456, 1975
Sau96I	GGNCC	7 cut(s)	4, 5, 316, 433, 1064, 1230, 1834
SchI	GAGTC	1 cut(s)	323
SduI	GDGCHC	6 cut(s)	8, 173, 870, 1057, 1440, 1530
SexAI	ACCWGGT	2 cut(s)	251, 1891
SfaNI	GCATC	7 cut(s)	139, 351, 538, 764, 835, 1570, 1720
SinI	GGWCC	3 cut(s)	433, 1230, 1834
SmiMI	CAYNNNNRTG	5 cut(s)	17, 518, 1263, 1485, 1542
Sse9I	AATT	8 cut(s)	139, 570, 687, 1321, 1431, 1540, 1882, 1983
SsiI	CCGC	9 cut(s)	201, 324, 388, 534, 633, 861, 1022, 1233, 2005
SspMI	CTAG	1 cut(s)	1073
SstI	GAGCTC	3 cut(s)	173, 870, 1530
TaaI	ACNGT	5 cut(s)	221, 561, 1418, 1521, 1948
TaiI	ACGT	2 cut(s)	270, 1472
TaqII	GACCGA	1 cut(s)	860
TasI	AATT	8 cut(s)	139, 570, 687, 1321, 1431, 1540, 1882, 1983
TatI	WGTACW	3 cut(s)	522, 1155, 1843
TauI	GCSGC	3 cut(s)	327, 635, 864
TfiI	GAWTC	6 cut(s)	1627, 1653, 1875, 1903, 1918, 1997
Tru1I	TTAA	6 cut(s)	231, 657, 798, 1395, 1641, 1953
Tru9I	TTAA	6 cut(s)	231, 657, 798, 1395, 1641, 1953
TscAI	CASTG	2 cut(s)	230, 687
TseFI	GTSAC	4 cut(s)	1004, 1024, 1338, 1489
TseI	GCWGC	2 cut(s)	1356, 1762
Tsp45I	GTSAC	4 cut(s)	1004, 1024, 1338, 1489
TspDTI	ATGAA	9 cut(s)	35, 144, 186, 773, 1220, 1637, 1793, 1895, 2000
TspGWI	ACGGA	2 cut(s)	289, 560
TspRI	CASTG	2 cut(s)	230, 687
Tth111I	GACNNNGTC	1 cut(s)	1030
VneI	GTGCAC	1 cut(s)	1053
VpaK11BI	GGWCC	3 cut(s)	433, 1230, 1834
XapI	RAATTY	1 cut(s)	1882
XceI	RCATGY	3 cut(s)	1053, 1061, 1156
XcmI	CCANNNNNNNNNTGG	2 cut(s)	782, 1276
XmiI	GTMKAC	2 cut(s)	270, 1136
XmnI	GAANNNNTTC	2 cut(s)	49, 560
XspI	CTAG	1 cut(s)	1073
Zsp2I	ATGCAT	3 cut(s)	154, 553, 850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.