Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013293

Physical Location & Seq

Genomic Coordinates Reverse (-)

83158136 .. 83160333

Gene Structure 2198 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022408

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGAGGCTTTCGAAGTGGAGGCTGTGTCTCATCATCAAACGCCAATATTCAGGTTCAAGTAAACCCAGCCAATATTCAGGTTCAAGTAAACCCAACCTCACAGCCTGGTTCAACAAATACGTGGACAAAGCCGATGTCTCTTCGTGGAACTCGGTTATTGCAGACTTGGCTCGGAGCGGTAACTCCGTCGAAGCCCTCCGAGCCTTTTCGTCAATGCGAAAGCTCTCTCTCACACCCAACCGCTCCTCCTTTCCTTGCGCCATCAAATCCTGCTCGGCTCTGTTGGATCTTTACTCCGGCAGGCAAGCCCACCAGCAGGCCTTGGTTTTCGGCTTCGAGTCCGATCTTTTCGTCTCCTCTGCTCTCATTGACATGTACTGCAGGTGCGGTTTATTGAGGGACGCATGGAAATTGTTCGACGAAATTCCTCACAGAAATGTGGTCTCTTGGACGTCCATGATCACAGGCTGCTTGCTAAACGACCACACCCGCCAAGCCTTGTTGCTTTTTAAGGAGTTGTTGGTCGATGAATTTGACAATGAGGACGTTGCTTTAGATCCGGTTGTTCTGGTTTCGGTTTTATCAGCTTGTTCTCGTGTATCCAGCAAGGGACTTACCCAATGTGTTCATGGGTTGGTGATGACAAGGGGTTTTGATGAGGATTTAGGAGTTGGAAACACCTTGATGGATGCATACGCCAAGTGCGGCGAGCTCGGTCTGTCTAGGAAGGTGTTTGATGGAATGGCTCAAAGGGATTTGGTTTCTTGGAACTCCATGATTGCAATATGTGCACAAAGTGGATTGTCTAATGAAGCATTGCATGTTTTCTATGGGATGGTGAAGGAGGGTGACTTCGTCTGCAATGCAGTGACATTGTCTGCTGTGTTGTTAGCTTGTGCGCACGCTGGGGCTCTGCTAGTGGGGCAATGCATACATGATCAGGTTGTAAAAATGGGCTTGGAAGAGAATGTGATTGTGTCTACCTCTGTTATTGACATGTATTGTAAGTGTGGAAGAGTTGACATGGCAAGGAAGGCATTTGATTGCATGAAGGAGAAGAATGTCAAGACCTGGACTGCTATGGTTGCAGGTTATGGAATGCATGGTCGGGCCAAGGAGGCTTTGGAAGTCTTCTACAAAATGATAAGCCATGGCATTAAGCCAAATTACATAACATTTGTGTCGCTTCTAAATGCTTGCAGCCATGCTGGTCTATTAGCAGAAGGATGGTATTGGTTTAATGCCATGAACCGTGAATTTGGTGTAAAACCTGGGATTGAGCACTATGGGTGCATGGTAGACCTTCTTGGGCGTGCAGGTGATCTCACTAAGGCTTATGATTTAATAAAAGGAATGACAATGAGGCCAGATTCTGTGTTGCAAGAAGCTGGCTATGCACCTGATATGGCTTCAGTTCTTCACGACGTTGATGAGGAAGAGAAAGAAATGACCCTGAGAGTTCATAGTGAGAAGCTGGCTGTTGCCTTTGGAATCATGAATTCAGTACCTGGTACAACAATTCAGATCATCAAGAATCTTCGAGTATGTGCTGACTGTCACACTGTGATCAAGCTGATATCCAAGGTTGTAAATCAGAAGATTGTAGTCAGAGATTCAAAGCGGTTTCATCACTTCAGGGATGGGTTGTGTTCTTGTGGAGATTTTTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

557

Amino Acids

61.61

Weight (kDa)

7.75

Isoelectric Point (pI)

30.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	254 - 283	6e-06	PPR repeat
PPR_long	PF17177	259 - 404	3.2e-06	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	328 - 355	3.4e-06	PPR repeat
PPR_2	PF13041	353 - 401	1.5e-10	PPR repeat family
PPR_3	PF13812	354 - 400	1.4e-06	Pentatricopeptide repeat domain
PPR	PF01535	357 - 386	1.4e-07	PPR repeat
DYW_deaminase	PF14432	464 - 556	9.9e-43	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26782
fragaria_vesca	FvH4_6g54200 FvH4_6g54200 FvH4_6g54200
malus_domestica	MD09G1004300.v1.1 MD17G1007800.v1.1
prunus_persica	Prupe.3G312400_v2.0.a1
pyrus_communis	pycom111g00310 pycom17g00330
rosa_chinensis	RchiOBHm_Chr2g0176381
rosa_laevigata	RLG00000022408
rosa_multiflora	Rmu_co8497233.1_g000001 Rmu_sc0009140.1_g000003
rosa_roxburghii	Rroxscaffold_2G00076480
rosa_rugosa	Rorug02G0593800
rosa_samantha	Rh2BG683700 Rh2CG646400
rosa_wichuraiana	Rw2G055130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	372, 1307
AatII	GACGTC	1 cut(s)	455
Acc16I	TGCGCA	1 cut(s)	900
Acc36I	ACCTGC	3 cut(s)	372, 1079, 1307
AccBSI	CCGCTC	2 cut(s)	177, 243
AccI	GTMKAC	2 cut(s)	980, 1299
AciI	CCGC	6 cut(s)	177, 241, 387, 490, 705, 1621
AclWI	GGATC	2 cut(s)	294, 551
AcsI	RAATTY	4 cut(s)	423, 530, 1256, 1498
AcuI	CTGAAG	2 cut(s)	1395, 1618
AcyI	GRCGYC	1 cut(s)	452
AdeI	CACNNNGTG	2 cut(s)	797, 1564
AfaI	GTAC	3 cut(s)	377, 1506, 1513
AfiI	CCNNNNNNNGG	1 cut(s)	316
AflIII	ACRYGT	2 cut(s)	372, 996
AgsI	TTSAA	4 cut(s)	57, 84, 112, 1617
AjnI	CCWGG	4 cut(s)	104, 1070, 1270, 1507
AluBI	AGCT	7 cut(s)	223, 587, 712, 893, 1388, 1474, 1573
AluI	AGCT	7 cut(s)	223, 587, 712, 893, 1388, 1474, 1573
Alw21I	GWGCWC	3 cut(s)	714, 793, 1284
Alw26I	GTCTC	4 cut(s)	32, 142, 358, 448
Alw44I	GTGCAC	1 cut(s)	789
AlwI	GGATC	2 cut(s)	294, 551
AlwNI	CAGNNNCTG	2 cut(s)	1373, 1508
AoxI	GGCC	3 cut(s)	318, 1110, 1364
ApaLI	GTGCAC	1 cut(s)	789
ApeKI	GCWGC	2 cut(s)	468, 1200
ApoI	RAATTY	4 cut(s)	423, 530, 1256, 1498
ArsI	GACNNNNNNTTYG	2 cut(s)	120, 152
Asp700I	GAANNNNTTC	1 cut(s)	413
AspLEI	GCGC	2 cut(s)	260, 901
AspS9I	GGNCC	1 cut(s)	1110
AsuHPI	GGTGA	4 cut(s)	649, 850, 860, 1331
AsuII	TTCGAA	1 cut(s)	11
BaeGI	GKGCMC	1 cut(s)	793
BanII	GRGCYC	2 cut(s)	714, 913
BauI	CACGAG	1 cut(s)	594
BbsI	GAAGAC	1 cut(s)	1123
Bbv12I	GWGCWC	3 cut(s)	714, 793, 1284
BbvI	GCAGC	2 cut(s)	455, 1212
BccI	CCATC	6 cut(s)	269, 679, 731, 829, 1221, 1634
BciT130I	CCWGG	4 cut(s)	106, 1072, 1272, 1509
BciVI	GTATCC	1 cut(s)	610
BclI	TGATCA	3 cut(s)	459, 937, 1566
BcoDI	GTCTC	4 cut(s)	32, 142, 358, 448
BfaI	CTAG	2 cut(s)	723, 917
BfmI	CTRYAG	1 cut(s)	379
BfuAI	ACCTGC	3 cut(s)	372, 1079, 1307
BfuI	GTATCC	1 cut(s)	610
BglI	GCCNNNNNGGC	1 cut(s)	1118
BisI	GCNGC	3 cut(s)	469, 706, 1201
BlsI	GCNGC	3 cut(s)	470, 707, 1202
Bme1390I	CCNGG	4 cut(s)	106, 1072, 1272, 1509
BmgT120I	GGNCC	1 cut(s)	1110
BmrFI	CCNGG	4 cut(s)	106, 1072, 1272, 1509
BmsI	GCATC	1 cut(s)	679
BpiI	GAAGAC	1 cut(s)	1123
Bpu14I	TTCGAA	1 cut(s)	11
BsaAI	YACGTR	1 cut(s)	121
BsaHI	GRCGYC	1 cut(s)	452
BsaI	GGTCTC	1 cut(s)	448
BsaJI	CCNNGG	5 cut(s)	321, 1113, 1150, 1271, 1581
BsaWI	WCCGGW	1 cut(s)	559
BsaXI	ACNNNNNCTCC	4 cut(s)	10, 40, 230, 260
Bsc4I	CCNNNNNNNGG	1 cut(s)	316
Bse3DI	GCAATG	3 cut(s)	815, 868, 932
BseBI	CCWGG	4 cut(s)	106, 1072, 1272, 1509
BseDI	CCNNGG	5 cut(s)	321, 1113, 1150, 1271, 1581
BseGI	GGATG	4 cut(s)	694, 840, 1232, 1645
BseLI	CCNNNNNNNGG	1 cut(s)	316
BseMI	GCAATG	3 cut(s)	815, 868, 932
BseMII	CTCAG	1 cut(s)	1445
BseRI	GAGGAG	2 cut(s)	235, 346
BseSI	GKGCMC	1 cut(s)	793
BseXI	GCAGC	2 cut(s)	455, 1212
BseYI	CCCAGC	2 cut(s)	65, 905
BsgI	GTGCAG	1 cut(s)	1335
BshFI	GGCC	3 cut(s)	320, 1112, 1366
BsiHKAI	GWGCWC	3 cut(s)	714, 793, 1284
BsiSI	CCGG	2 cut(s)	297, 560
BslFI	GGGAC	2 cut(s)	413, 624
BslI	CCNNNNNNNGG	1 cut(s)	316
BsmAI	GTCTC	4 cut(s)	32, 142, 358, 448
BsmBI	CGTCTC	1 cut(s)	358
BsmFI	GGGAC	2 cut(s)	413, 624
BsmI	GAATGC	1 cut(s)	1104
BsnI	GGCC	3 cut(s)	320, 1112, 1366
Bso31I	GGTCTC	1 cut(s)	448
Bsp119I	TTCGAA	1 cut(s)	11
Bsp1286I	GDGCHC	4 cut(s)	714, 793, 913, 1284
Bsp143I	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
Bsp19I	CCATGG	1 cut(s)	1150
BspACI	CCGC	6 cut(s)	177, 241, 387, 490, 705, 1621
BspANI	GGCC	3 cut(s)	320, 1112, 1366
BspCNI	CTCAG	1 cut(s)	1446
BspHI	TCATGA	1 cut(s)	1494
BspMAI	CTGCAG	1 cut(s)	383
BspMI	ACCTGC	3 cut(s)	372, 1079, 1307
BspPI	GGATC	2 cut(s)	294, 551
BspT104I	TTCGAA	1 cut(s)	11
BspTNI	GGTCTC	1 cut(s)	448
BsrBI	CCGCTC	2 cut(s)	177, 243
BsrDI	GCAATG	3 cut(s)	815, 868, 932
BssECI	CCNNGG	5 cut(s)	321, 1113, 1150, 1271, 1581
BssMI	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
BssNI	GRCGYC	1 cut(s)	452
BssSI	CACGAG	1 cut(s)	594
BssT1I	CCWWGG	4 cut(s)	321, 1113, 1150, 1581
Bst2BI	CACGAG	1 cut(s)	594
Bst2UI	CCWGG	4 cut(s)	106, 1072, 1272, 1509
Bst4CI	ACNGT	3 cut(s)	1253, 1556, 1564
Bst6I	CTCTTC	4 cut(s)	145, 957, 1009, 1431
BstACI	GRCGYC	1 cut(s)	452
BstAPI	GCANNNNNTGC	1 cut(s)	788
BstBAI	YACGTR	1 cut(s)	121
BstBI	TTCGAA	1 cut(s)	11
BstDEI	CTNAG	2 cut(s)	1329, 1454
BstDSI	CCRYGG	1 cut(s)	1150
BstF5I	GGATG	4 cut(s)	694, 840, 1232, 1645
BstHHI	GCGC	2 cut(s)	260, 901
BstKTI	GATC	8 cut(s)	289, 346, 462, 559, 940, 1324, 1527, 1569
BstMAI	GTCTC	4 cut(s)	32, 142, 358, 448
BstMBI	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
BstMWI	GCNNNNNNNGC	8 cut(s)	167, 200, 788, 922, 1034, 1085, 1118, 1394
BstNI	CCWGG	4 cut(s)	106, 1072, 1272, 1509
BstNSI	RCATGY	3 cut(s)	376, 824, 1000
BstSCI	CCNGG	4 cut(s)	104, 1070, 1270, 1507
BstSFI	CTRYAG	1 cut(s)	379
BstSLI	GKGCMC	1 cut(s)	793
BstV1I	GCAGC	2 cut(s)	455, 1212
BstV2I	GAAGAC	1 cut(s)	1123
BstX2I	RGATCY	2 cut(s)	286, 556
BstYI	RGATCY	2 cut(s)	286, 556
BsuI	GTATCC	1 cut(s)	610
BsuRI	GGCC	3 cut(s)	320, 1112, 1366
BtgI	CCRYGG	1 cut(s)	1150
BtsCI	GGATG	4 cut(s)	694, 840, 1232, 1645
BtsI	GCAGTG	1 cut(s)	873
BtsIMutI	CAGTG	2 cut(s)	873, 1560
BveI	ACCTGC	3 cut(s)	372, 1079, 1307
CaiI	CAGNNNCTG	2 cut(s)	1373, 1508
CciI	TCATGA	1 cut(s)	1494
CfoI	GCGC	2 cut(s)	260, 901
Cfr13I	GGNCC	1 cut(s)	1110
CseI	GACGC	1 cut(s)	410
CsiI	ACCWGGT	1 cut(s)	1507
Csp6I	GTAC	3 cut(s)	376, 1505, 1512
CviQI	GTAC	3 cut(s)	376, 1505, 1512
DdeI	CTNAG	2 cut(s)	1329, 1454
DpnI	GATC	8 cut(s)	288, 345, 461, 558, 939, 1323, 1526, 1568
DpnII	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
DraIII	CACNNNGTG	2 cut(s)	797, 1564
Eam1104I	CTCTTC	4 cut(s)	145, 957, 1009, 1431
EarI	CTCTTC	4 cut(s)	145, 957, 1009, 1431
Ecl136II	GAGCTC	1 cut(s)	712
Eco130I	CCWWGG	4 cut(s)	321, 1113, 1150, 1581
Eco147I	AGGCCT	1 cut(s)	320
Eco24I	GRGCYC	2 cut(s)	714, 913
Eco31I	GGTCTC	1 cut(s)	448
Eco32I	GATATC	1 cut(s)	1578
Eco53kI	GAGCTC	1 cut(s)	712
Eco57I	CTGAAG	2 cut(s)	1395, 1618
EcoICRI	GAGCTC	1 cut(s)	712
EcoRI	GAATTC	1 cut(s)	1498
EcoRII	CCWGG	4 cut(s)	104, 1070, 1270, 1507
EcoRV	GATATC	1 cut(s)	1578
EcoT14I	CCWWGG	4 cut(s)	321, 1113, 1150, 1581
EcoT22I	ATGCAT	3 cut(s)	694, 932, 1104
EcoT38I	GRGCYC	2 cut(s)	714, 913
ErhI	CCWWGG	4 cut(s)	321, 1113, 1150, 1581
Esp3I	CGTCTC	1 cut(s)	358
FaqI	GGGAC	2 cut(s)	413, 624
FauI	CCCGC	1 cut(s)	497
FbaI	TGATCA	3 cut(s)	459, 937, 1566
FblI	GTMKAC	2 cut(s)	980, 1299
Fnu4HI	GCNGC	3 cut(s)	469, 706, 1201
FokI	GGATG	4 cut(s)	701, 847, 1239, 1652
FriOI	GRGCYC	2 cut(s)	714, 913
Fsp4HI	GCNGC	3 cut(s)	469, 706, 1201
FspAI	RTGCGCAY	1 cut(s)	900
FspBI	CTAG	2 cut(s)	723, 917
FspI	TGCGCA	1 cut(s)	900
GlaI	GCGC	2 cut(s)	259, 900
GluI	GCNGC	3 cut(s)	469, 706, 1201
GsaI	CCCAGC	2 cut(s)	69, 909
HaeIII	GGCC	3 cut(s)	320, 1112, 1366
HapII	CCGG	2 cut(s)	297, 560
HgaI	GACGC	1 cut(s)	410
HhaI	GCGC	2 cut(s)	260, 901
Hin1I	GRCGYC	1 cut(s)	452
Hin6I	GCGC	2 cut(s)	258, 899
HinP1I	GCGC	2 cut(s)	258, 899
HincII	GTYRAC	1 cut(s)	1021
HindII	GTYRAC	1 cut(s)	1021
HinfI	GANTC	5 cut(s)	338, 1370, 1491, 1534, 1613
HpaII	CCGG	2 cut(s)	297, 560
HphI	GGTGA	4 cut(s)	649, 850, 860, 1331
Hpy166II	GTNNAC	7 cut(s)	62, 89, 124, 791, 981, 1021, 1300
Hpy188I	TCNGA	6 cut(s)	174, 200, 343, 1524, 1596, 1610
Hpy188III	TCNNGA	4 cut(s)	1066, 1421, 1495, 1531
Hpy8I	GTNNAC	7 cut(s)	62, 89, 124, 791, 981, 1021, 1300
Hpy99I	CGWCG	3 cut(s)	191, 422, 1427
HpyAV	CCTTC	6 cut(s)	721, 835, 1027, 1045, 1217, 1313
HpyCH4III	ACNGT	3 cut(s)	1253, 1556, 1564
HpyCH4IV	ACGT	4 cut(s)	120, 452, 546, 1425
HpyF10VI	GCNNNNNNNGC	8 cut(s)	167, 200, 788, 922, 1034, 1085, 1118, 1394
HpyF3I	CTNAG	2 cut(s)	1329, 1454
HpySE526I	ACGT	4 cut(s)	120, 452, 546, 1425
Hsp92I	GRCGYC	1 cut(s)	452
HspAI	GCGC	2 cut(s)	258, 899
Ksp22I	TGATCA	3 cut(s)	459, 937, 1566
Kzo9I	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
LmnI	GCTCC	2 cut(s)	174, 248
Lsp1109I	GCAGC	2 cut(s)	455, 1212
LweI	GCATC	1 cut(s)	679
MabI	ACCWGGT	1 cut(s)	1507
MaeI	CTAG	2 cut(s)	723, 917
MaeII	ACGT	4 cut(s)	120, 452, 546, 1425
MaeIII	GTNAC	4 cut(s)	179, 848, 868, 1556
MalI	GATC	8 cut(s)	288, 345, 461, 558, 939, 1323, 1526, 1568
MbiI	CCGCTC	2 cut(s)	177, 243
MboI	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
MboII	GAAGA	9 cut(s)	132, 974, 1026, 1069, 1123, 1409, 1448, 1529, 1609
MflI	RGATCY	2 cut(s)	286, 556
MhlI	GDGCHC	4 cut(s)	714, 793, 913, 1284
MluCI	AATT	7 cut(s)	410, 423, 530, 1165, 1256, 1498, 1518
MlyI	GAGTC	1 cut(s)	347
MmeI	TCCRAC	2 cut(s)	264, 652
Mph1103I	ATGCAT	3 cut(s)	694, 932, 1104
MroXI	GAANNNNTTC	1 cut(s)	413
MseI	TTAA	4 cut(s)	510, 1158, 1239, 1343
MslI	CAYNNNNRTG	3 cut(s)	371, 435, 683
MspI	CCGG	2 cut(s)	297, 560
MspR9I	CCNGG	4 cut(s)	106, 1072, 1272, 1509
Mva1269I	GAATGC	1 cut(s)	1104
MvaI	CCWGG	4 cut(s)	106, 1072, 1272, 1509
MwoI	GCNNNNNNNGC	8 cut(s)	167, 200, 788, 922, 1034, 1085, 1118, 1394
NcoI	CCATGG	1 cut(s)	1150
NdeII	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
NmeAIII	GCCGAG	1 cut(s)	254
NmuCI	GTSAC	3 cut(s)	848, 868, 1556
NsbI	TGCGCA	1 cut(s)	900
NsiI	ATGCAT	3 cut(s)	694, 932, 1104
NspI	RCATGY	3 cut(s)	376, 824, 1000
NspV	TTCGAA	1 cut(s)	11
PagI	TCATGA	1 cut(s)	1494
PaqCI	CACCTGC	2 cut(s)	372, 1307
PceI	AGGCCT	1 cut(s)	320
PciI	ACATGT	2 cut(s)	372, 996
PctI	GAATGC	1 cut(s)	1104
PdmI	GAANNNNTTC	1 cut(s)	413
PfeI	GAWTC	4 cut(s)	1370, 1491, 1534, 1613
PflFI	GACNNNGTC	2 cut(s)	854, 874
PkrI	GCNGC	3 cut(s)	470, 707, 1202
PleI	GAGTC	1 cut(s)	346
PpsI	GAGTC	1 cut(s)	346
Ppu21I	YACGTR	1 cut(s)	121
PscI	ACATGT	2 cut(s)	372, 996
Psp124BI	GAGCTC	1 cut(s)	714
Psp6I	CCWGG	4 cut(s)	104, 1070, 1270, 1507
PspFI	CCCAGC	2 cut(s)	65, 905
PspGI	CCWGG	4 cut(s)	104, 1070, 1270, 1507
PspPI	GGNCC	1 cut(s)	1110
PstI	CTGCAG	1 cut(s)	383
PstNI	CAGNNNCTG	2 cut(s)	1373, 1508
PsuI	RGATCY	2 cut(s)	286, 556
PsyI	GACNNNGTC	2 cut(s)	854, 874
RsaI	GTAC	3 cut(s)	377, 1506, 1513
RsaNI	GTAC	3 cut(s)	376, 1505, 1512
RseI	CAYNNNNRTG	3 cut(s)	371, 435, 683
SacI	GAGCTC	1 cut(s)	714
SaqAI	TTAA	4 cut(s)	510, 1158, 1239, 1343
SatI	GCNGC	3 cut(s)	469, 706, 1201
Sau3AI	GATC	8 cut(s)	286, 343, 459, 556, 937, 1321, 1524, 1566
Sau96I	GGNCC	1 cut(s)	1110
SchI	GAGTC	1 cut(s)	347
ScrFI	CCNGG	4 cut(s)	106, 1072, 1272, 1509
SduI	GDGCHC	4 cut(s)	714, 793, 913, 1284
SexAI	ACCWGGT	1 cut(s)	1507
SfaNI	GCATC	1 cut(s)	679
SfcI	CTRYAG	1 cut(s)	379
SfuI	TTCGAA	1 cut(s)	11
SmiMI	CAYNNNNRTG	3 cut(s)	371, 435, 683
Sse9I	AATT	7 cut(s)	410, 423, 530, 1165, 1256, 1498, 1518
SseBI	AGGCCT	1 cut(s)	320
SsiI	CCGC	6 cut(s)	177, 241, 387, 490, 705, 1621
SspI	AATATT	2 cut(s)	47, 74
SspMI	CTAG	2 cut(s)	723, 917
SstI	GAGCTC	1 cut(s)	714
StuI	AGGCCT	1 cut(s)	320
StyD4I	CCNGG	4 cut(s)	104, 1070, 1270, 1507
StyI	CCWWGG	4 cut(s)	321, 1113, 1150, 1581
TaaI	ACNGT	3 cut(s)	1253, 1556, 1564
TaiI	ACGT	4 cut(s)	123, 455, 549, 1428
TaqI	TCGA	6 cut(s)	11, 189, 336, 417, 525, 1540
TaqII	GACCGA	1 cut(s)	704
TasI	AATT	7 cut(s)	410, 423, 530, 1165, 1256, 1498, 1518
TatI	WGTACW	1 cut(s)	375
TauI	GCSGC	1 cut(s)	708
TfiI	GAWTC	4 cut(s)	1370, 1491, 1534, 1613
Tru1I	TTAA	4 cut(s)	510, 1158, 1239, 1343
Tru9I	TTAA	4 cut(s)	510, 1158, 1239, 1343
TscAI	CASTG	2 cut(s)	873, 1567
TseFI	GTSAC	3 cut(s)	848, 868, 1556
TseI	GCWGC	2 cut(s)	468, 1200
Tsp45I	GTSAC	3 cut(s)	848, 868, 1556
TspDTI	ATGAA	8 cut(s)	543, 617, 825, 1064, 1262, 1451, 1511, 1616
TspGWI	ACGGA	1 cut(s)	175
TspRI	CASTG	2 cut(s)	873, 1567
Tth111I	GACNNNGTC	2 cut(s)	854, 874
VneI	GTGCAC	1 cut(s)	789
XapI	RAATTY	4 cut(s)	423, 530, 1256, 1498
XceI	RCATGY	3 cut(s)	376, 824, 1000
XcmI	CCANNNNNNNNNTGG	2 cut(s)	626, 1120
XmiI	GTMKAC	2 cut(s)	980, 1299
XmnI	GAANNNNTTC	1 cut(s)	413
XspI	CTAG	2 cut(s)	723, 917
ZraI	GACGTC	1 cut(s)	453
Zsp2I	ATGCAT	3 cut(s)	694, 932, 1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.