Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0013293

Physical Location & Seq

Genomic Coordinates Reverse (-)

89197193 .. 89199639

Gene Structure 2447 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG683700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGAGGATTTCCAAGTGGAGGTTGTGTCTCATCATCAAACGCCAATATTCAGGTTCAAGTAAACCCAGCCAATATTCAGGTTCAAGTAAACCCAACCTCACAGCCTGGTTCAACAAATACGTGGACAAAGCCGATGTCTGTTCGTGGAACTCGGTTATTGCAGACTTGGCTCGGAGCGGTAACTCCGTCGAAGCCCTCCGAGCCTTTTCGTCAATGCGAAGGCTCTCTCTCACCCCCAACCGCTCCTCCTTTCCTTGCGCCATCAAATCCTGCTCGGCTCTGTTGGATCTTTACTCCGGCAGGCAAGCCCACCAGCAGGCCTTGGTTTTCGGCTTCGAGTCCGATCTTTTCGTCTCCTCTGCTCTCATTGACATGTACTGCAGGTGCGGTTTATTGAGGGACGCATGGAAGTTGTTCGACGAAATTCCTCGCAGAAATGTGGTCTCTTGGACGTCCATGATCACAGGCTGCTTGCTAAACGACCACACCCGCCAAGCCTTGTTGCTTTTTAAGGAGTTGTTGGTCGATGCATTTGACAATGAGGACGTTGCTTTAGATCCGGTTGTTCTGGTTTCGGTTTTGTCGGCTTGTTCTCGTGTATCCAGCAAGGGAATTACCCAATGTGTTCATGGGTTGGTGATGACAAGGGGTTTTGATGAGGATTTAGGAGTTGGAAACACCTTGATGGATGCATACGCCAAGTGCGGCGAGCTCGGTCTGTCTAGGAAGGTGTTTGATGGAATGGCTCAAAGGGATTTGGTTTCTTGGAACTCCATGATTGCAATATATGCACAAAGTGGATTGTCTAATGAAGCATTGCATGTTTTCTATGGGATGGTGAAGGAGGGTGACTTCCTCTACAATGCAGTGACATTGTCTGCTGTCTTGTTAGCTTGTGCGCACGCTGGGGCTCTTCTAGTGGGCCAATGCGTACATGATCAGGTTGTAAAAATGGGCTTGGAAGAGAATGTGATTGTGTCTACCTCTATTATTGACATGTATTGTAAGTGTGGAAGAGTTGACGTGGCAAGGAAGGCATTTGATTGCATGAAGGAGAAGAATGTCAAGACCTGGACTGCTATGGTTGCAGGTTATGGAATGCATGGTCGGGCCAAGGAGGCTTTGGAAGTCTTCTACAAAATGATAAGCCATGGCATTAAGCCAAATTACATAACATTTGTGTCGCTTCTAAATGCTTGCAGCCATGCTGGTCTATTAGCAGAAGGATGGTATTGGTTTAATACCATGAACCATGAATTTGGTGTAAAACCTGGGATTGAGCACTATGGGTGCATGGTGGACCTTCTTGGGCGTGCCGGTGATCTCACTAAGGCTTATGATTTAATAAAAGGAATGACAATGAGGCCAGATTCTGTGGTCTGGGGTTCCTTTCTTGGGGCTTGTAGGATACACAAAAACGTGAAGCTTGCAGAGATTTCTGCTAGGAAACTGTTTGAGTTGGATCCAAATAATTGTGGGTACTACATCTTGCTTTCAAATATATATGCTGATGCTGGGAGATGGGAAGATGTTGAGAAGATGAGACTACTAATGAAGAATCGTGGACTGGCTAAACCGCCTGGATTCAGTGTGGTTGAACTGAAAGGTATGGTTCATTTATTTTTAGTTGGAGATAGAGAGCATCCTCAGCATAAAAAGATTTATGAGTATCTGGAAAAACTAACTATAAAGCTGCAAGAAGCTGGCTATGCACCTGATATGGCTTCAGTTCTTCACGACGTTGATGAGGAAGAGAAAGAAATGACCCTGAGAGTTCATAGTGAGAAGCTAGCTGTTGCCTTTGGAATCATGAATTCAGTACCTGGTACAACAATTCAGATCATCAAGAATCTTCGAGTATGTGCTGACTGTCACACTGTGATCAAGCTGATATCCAACGTTGTAAATCGGGAGATTGTAGTCAGAGATTCAAAACGGTTTCATCACTTCAGGGATGGGTTGTGTTCTTGTGGAGATTTTTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

661

Amino Acids

73.88

Weight (kDa)

8.31

Isoelectric Point (pI)

31.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	254 - 283	3.3e-06	PPR repeat
PPR_2	PF13041	353 - 401	1.8e-10	PPR repeat family
PPR_3	PF13812	354 - 400	2.6e-06	Pentatricopeptide repeat domain
PPR	PF01535	357 - 386	1.7e-07	PPR repeat
E_motif	PF20431	471 - 533	7.2e-22	E motif
Eplus_motif	PF20430	538 - 563	9e-06	E+ motif
DYW_deaminase	PF14432	569 - 661	1.1e-42	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26782
fragaria_vesca	FvH4_6g54200 FvH4_6g54200 FvH4_6g54200
malus_domestica	MD09G1004300.v1.1 MD17G1007800.v1.1
prunus_persica	Prupe.3G312400_v2.0.a1
pyrus_communis	pycom111g00310 pycom17g00330
rosa_chinensis	RchiOBHm_Chr2g0176381
rosa_laevigata	RLG00000022408
rosa_multiflora	Rmu_co8497233.1_g000001 Rmu_sc0009140.1_g000003
rosa_roxburghii	Rroxscaffold_2G00076480
rosa_rugosa	Rorug02G0593800
rosa_samantha	Rh2BG683700 Rh2CG646400
rosa_wichuraiana	Rw2G055130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	372
AatII	GACGTC	1 cut(s)	455
Acc16I	TGCGCA	1 cut(s)	900
Acc36I	ACCTGC	2 cut(s)	372, 1079
AccBSI	CCGCTC	2 cut(s)	177, 243
AccI	GTMKAC	1 cut(s)	980
AciI	CCGC	6 cut(s)	177, 241, 387, 490, 705, 1577
AclI	AACGTT	1 cut(s)	1899
AclWI	GGATC	4 cut(s)	294, 551, 1457, 1470
AcsI	RAATTY	3 cut(s)	423, 1256, 1813
AcuI	CTGAAG	2 cut(s)	1710, 1933
AcyI	GRCGYC	1 cut(s)	452
AdeI	CACNNNGTG	2 cut(s)	797, 1879
AfaI	GTAC	5 cut(s)	377, 933, 1481, 1821, 1828
AfiI	CCNNNNNNNGG	3 cut(s)	18, 316, 1395
AflIII	ACRYGT	2 cut(s)	372, 996
AgsI	TTSAA	6 cut(s)	57, 84, 112, 1497, 1598, 1932
AjiI	CACGTC	1 cut(s)	1024
AjnI	CCWGG	5 cut(s)	104, 1070, 1270, 1579, 1822
AluBI	AGCT	8 cut(s)	712, 893, 1426, 1693, 1703, 1789, 1793, 1888
AluI	AGCT	8 cut(s)	712, 893, 1426, 1693, 1703, 1789, 1793, 1888
Alw21I	GWGCWC	2 cut(s)	714, 1284
Alw26I	GTCTC	4 cut(s)	32, 358, 448, 1537
AlwI	GGATC	4 cut(s)	294, 551, 1457, 1470
AlwNI	CAGNNNCTG	2 cut(s)	1373, 1823
AoxI	GGCC	4 cut(s)	318, 922, 1110, 1364
ApeKI	GCWGC	3 cut(s)	468, 1200, 1693
ApoI	RAATTY	3 cut(s)	423, 1256, 1813
ArsI	GACNNNNNNTTYG	2 cut(s)	120, 152
Asp700I	GAANNNNTTC	1 cut(s)	413
AspLEI	GCGC	2 cut(s)	260, 901
AspS9I	GGNCC	3 cut(s)	922, 1110, 1300
AsuHPI	GGTGA	5 cut(s)	223, 649, 850, 860, 1331
AsuNHI	GCTAGC	1 cut(s)	1789
AvaII	GGWCC	1 cut(s)	1300
BamHI	GGATCC	1 cut(s)	1462
BanII	GRGCYC	2 cut(s)	714, 913
BauI	CACGAG	1 cut(s)	594
BbsI	GAAGAC	1 cut(s)	1123
Bbv12I	GWGCWC	2 cut(s)	714, 1284
BbvCI	CCTCAGC	1 cut(s)	1647
BbvI	GCAGC	3 cut(s)	455, 1212, 1680
BccI	CCATC	7 cut(s)	269, 679, 731, 829, 1221, 1515, 1949
BciT130I	CCWGG	5 cut(s)	106, 1072, 1272, 1581, 1824
BciVI	GTATCC	2 cut(s)	610, 1401
BclI	TGATCA	3 cut(s)	459, 937, 1881
BcoDI	GTCTC	4 cut(s)	32, 358, 448, 1537
BfaI	CTAG	4 cut(s)	723, 917, 1443, 1790
BfmI	CTRYAG	1 cut(s)	379
BfuAI	ACCTGC	2 cut(s)	372, 1079
BfuI	GTATCC	2 cut(s)	610, 1401
BglI	GCCNNNNNGGC	1 cut(s)	1118
BisI	GCNGC	4 cut(s)	469, 706, 1201, 1694
BlsI	GCNGC	4 cut(s)	470, 707, 1202, 1695
Bme1390I	CCNGG	5 cut(s)	106, 1072, 1272, 1581, 1824
Bme18I	GGWCC	1 cut(s)	1300
BmgBI	CACGTC	1 cut(s)	1024
BmgT120I	GGNCC	3 cut(s)	922, 1110, 1300
BmiI	GGNNCC	2 cut(s)	1387, 1464
BmrFI	CCNGG	5 cut(s)	106, 1072, 1272, 1581, 1824
BmsI	GCATC	4 cut(s)	517, 679, 1501, 1651
BmtI	GCTAGC	1 cut(s)	1793
BpiI	GAAGAC	1 cut(s)	1123
Bpu10I	CCTNAGC	1 cut(s)	1647
BsaAI	YACGTR	1 cut(s)	121
BsaHI	GRCGYC	1 cut(s)	452
BsaI	GGTCTC	1 cut(s)	448
BsaJI	CCNNGG	4 cut(s)	321, 1113, 1150, 1271
BsaWI	WCCGGW	1 cut(s)	559
BsaXI	ACNNNNNCTCC	4 cut(s)	10, 40, 230, 260
Bsc4I	CCNNNNNNNGG	3 cut(s)	18, 316, 1395
Bse118I	RCCGGY	1 cut(s)	1316
Bse1I	ACTGG	1 cut(s)	1572
Bse3DI	GCAATG	1 cut(s)	815
BseBI	CCWGG	5 cut(s)	106, 1072, 1272, 1581, 1824
BseDI	CCNNGG	4 cut(s)	321, 1113, 1150, 1271
BseGI	GGATG	5 cut(s)	694, 840, 1232, 1642, 1960
BseLI	CCNNNNNNNGG	3 cut(s)	18, 316, 1395
BseMI	GCAATG	1 cut(s)	815
BseMII	CTCAG	2 cut(s)	1661, 1760
BseNI	ACTGG	1 cut(s)	1572
BseRI	GAGGAG	2 cut(s)	235, 346
BseXI	GCAGC	3 cut(s)	455, 1212, 1680
BseYI	CCCAGC	3 cut(s)	65, 905, 1514
BshFI	GGCC	4 cut(s)	320, 924, 1112, 1366
BsiHKAI	GWGCWC	2 cut(s)	714, 1284
BsiSI	CCGG	3 cut(s)	297, 560, 1317
BslFI	GGGAC	1 cut(s)	413
BslI	CCNNNNNNNGG	3 cut(s)	18, 316, 1395
BsmAI	GTCTC	4 cut(s)	32, 358, 448, 1537
BsmBI	CGTCTC	1 cut(s)	358
BsmFI	GGGAC	1 cut(s)	413
BsmI	GAATGC	1 cut(s)	1104
BsnI	GGCC	4 cut(s)	320, 924, 1112, 1366
Bso31I	GGTCTC	1 cut(s)	448
Bsp1286I	GDGCHC	3 cut(s)	714, 913, 1284
Bsp143I	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
Bsp19I	CCATGG	1 cut(s)	1150
BspACI	CCGC	6 cut(s)	177, 241, 387, 490, 705, 1577
BspANI	GGCC	4 cut(s)	320, 924, 1112, 1366
BspCNI	CTCAG	2 cut(s)	1660, 1761
BspHI	TCATGA	1 cut(s)	1809
BspLI	GGNNCC	2 cut(s)	1387, 1464
BspMAI	CTGCAG	1 cut(s)	383
BspMI	ACCTGC	2 cut(s)	372, 1079
BspOI	GCTAGC	1 cut(s)	1793
BspPI	GGATC	4 cut(s)	294, 551, 1457, 1470
BspQI	GCTCTTC	1 cut(s)	918
BspTNI	GGTCTC	1 cut(s)	448
BsrBI	CCGCTC	2 cut(s)	177, 243
BsrDI	GCAATG	1 cut(s)	815
BsrFI	RCCGGY	1 cut(s)	1316
BsrI	ACTGG	1 cut(s)	1572
BssAI	RCCGGY	1 cut(s)	1316
BssECI	CCNNGG	4 cut(s)	321, 1113, 1150, 1271
BssMI	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
BssNI	GRCGYC	1 cut(s)	452
BssSI	CACGAG	1 cut(s)	594
BssT1I	CCWWGG	3 cut(s)	321, 1113, 1150
Bst2BI	CACGAG	1 cut(s)	594
Bst2UI	CCWGG	5 cut(s)	106, 1072, 1272, 1581, 1824
Bst4CI	ACNGT	4 cut(s)	1452, 1871, 1879, 1938
Bst6I	CTCTTC	4 cut(s)	918, 957, 1009, 1746
BstACI	GRCGYC	1 cut(s)	452
BstAPI	GCANNNNNTGC	1 cut(s)	788
BstBAI	YACGTR	1 cut(s)	121
BstDEI	CTNAG	3 cut(s)	1329, 1647, 1769
BstDSI	CCRYGG	1 cut(s)	1150
BstF5I	GGATG	5 cut(s)	694, 840, 1232, 1642, 1960
BstHHI	GCGC	2 cut(s)	260, 901
BstKTI	GATC	9 cut(s)	289, 346, 462, 559, 940, 1324, 1465, 1842, 1884
BstMAI	GTCTC	4 cut(s)	32, 358, 448, 1537
BstMBI	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
BstMWI	GCNNNNNNNGC	8 cut(s)	167, 200, 788, 1034, 1085, 1118, 1648, 1709
BstNI	CCWGG	5 cut(s)	106, 1072, 1272, 1581, 1824
BstNSI	RCATGY	3 cut(s)	376, 824, 1000
BstSCI	CCNGG	5 cut(s)	104, 1070, 1270, 1579, 1822
BstSFI	CTRYAG	1 cut(s)	379
BstV1I	GCAGC	3 cut(s)	455, 1212, 1680
BstV2I	GAAGAC	1 cut(s)	1123
BstX2I	RGATCY	3 cut(s)	286, 556, 1462
BstXI	CCANNNNNNTGG	1 cut(s)	1259
BstYI	RGATCY	3 cut(s)	286, 556, 1462
BsuI	GTATCC	2 cut(s)	610, 1401
BsuRI	GGCC	4 cut(s)	320, 924, 1112, 1366
BtgI	CCRYGG	1 cut(s)	1150
BtrI	CACGTC	1 cut(s)	1024
BtsCI	GGATG	5 cut(s)	694, 840, 1232, 1642, 1960
BtsI	GCAGTG	1 cut(s)	873
BtsIMutI	CAGTG	3 cut(s)	873, 1594, 1875
BveI	ACCTGC	2 cut(s)	372, 1079
CaiI	CAGNNNCTG	2 cut(s)	1373, 1823
CciI	TCATGA	1 cut(s)	1809
CfoI	GCGC	2 cut(s)	260, 901
Cfr10I	RCCGGY	1 cut(s)	1316
Cfr13I	GGNCC	3 cut(s)	922, 1110, 1300
CseI	GACGC	1 cut(s)	410
CsiI	ACCWGGT	1 cut(s)	1822
Csp6I	GTAC	5 cut(s)	376, 932, 1480, 1820, 1827
CviQI	GTAC	5 cut(s)	376, 932, 1480, 1820, 1827
DdeI	CTNAG	3 cut(s)	1329, 1647, 1769
DpnI	GATC	9 cut(s)	288, 345, 461, 558, 939, 1323, 1464, 1841, 1883
DpnII	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
DraIII	CACNNNGTG	2 cut(s)	797, 1879
Eam1104I	CTCTTC	4 cut(s)	918, 957, 1009, 1746
EarI	CTCTTC	4 cut(s)	918, 957, 1009, 1746
Ecl136II	GAGCTC	1 cut(s)	712
Eco130I	CCWWGG	3 cut(s)	321, 1113, 1150
Eco147I	AGGCCT	1 cut(s)	320
Eco24I	GRGCYC	2 cut(s)	714, 913
Eco31I	GGTCTC	1 cut(s)	448
Eco32I	GATATC	1 cut(s)	1893
Eco47I	GGWCC	1 cut(s)	1300
Eco53kI	GAGCTC	1 cut(s)	712
Eco57I	CTGAAG	2 cut(s)	1710, 1933
EcoICRI	GAGCTC	1 cut(s)	712
EcoRI	GAATTC	1 cut(s)	1813
EcoRII	CCWGG	5 cut(s)	104, 1070, 1270, 1579, 1822
EcoRV	GATATC	1 cut(s)	1893
EcoT14I	CCWWGG	3 cut(s)	321, 1113, 1150
EcoT22I	ATGCAT	3 cut(s)	532, 694, 1104
EcoT38I	GRGCYC	2 cut(s)	714, 913
ErhI	CCWWGG	3 cut(s)	321, 1113, 1150
Esp3I	CGTCTC	1 cut(s)	358
FaqI	GGGAC	1 cut(s)	413
FauI	CCCGC	1 cut(s)	497
FbaI	TGATCA	3 cut(s)	459, 937, 1881
FblI	GTMKAC	1 cut(s)	980
Fnu4HI	GCNGC	4 cut(s)	469, 706, 1201, 1694
FokI	GGATG	5 cut(s)	701, 847, 1239, 1629, 1967
FriOI	GRGCYC	2 cut(s)	714, 913
Fsp4HI	GCNGC	4 cut(s)	469, 706, 1201, 1694
FspAI	RTGCGCAY	1 cut(s)	900
FspBI	CTAG	4 cut(s)	723, 917, 1443, 1790
FspI	TGCGCA	1 cut(s)	900
GlaI	GCGC	2 cut(s)	259, 900
GluI	GCNGC	4 cut(s)	469, 706, 1201, 1694
GsaI	CCCAGC	3 cut(s)	69, 909, 1518
HaeIII	GGCC	4 cut(s)	320, 924, 1112, 1366
HapII	CCGG	3 cut(s)	297, 560, 1317
HgaI	GACGC	1 cut(s)	410
HhaI	GCGC	2 cut(s)	260, 901
Hin1I	GRCGYC	1 cut(s)	452
Hin6I	GCGC	2 cut(s)	258, 899
HinP1I	GCGC	2 cut(s)	258, 899
HincII	GTYRAC	1 cut(s)	1021
HindII	GTYRAC	1 cut(s)	1021
HindIII	AAGCTT	1 cut(s)	1424
HinfI	GANTC	7 cut(s)	338, 1370, 1558, 1584, 1806, 1849, 1928
HpaII	CCGG	3 cut(s)	297, 560, 1317
HphI	GGTGA	5 cut(s)	223, 649, 850, 860, 1331
Hpy166II	GTNNAC	7 cut(s)	62, 89, 124, 981, 1021, 1300, 1565
Hpy188I	TCNGA	5 cut(s)	174, 200, 343, 1839, 1925
Hpy188III	TCNNGA	6 cut(s)	1066, 1673, 1736, 1810, 1846, 1910
Hpy8I	GTNNAC	7 cut(s)	62, 89, 124, 981, 1021, 1300, 1565
Hpy99I	CGWCG	3 cut(s)	191, 422, 1742
HpyAV	CCTTC	7 cut(s)	213, 721, 835, 1027, 1045, 1217, 1313
HpyCH4III	ACNGT	4 cut(s)	1452, 1871, 1879, 1938
HpyCH4IV	ACGT	7 cut(s)	120, 452, 546, 1023, 1419, 1740, 1899
HpyF10VI	GCNNNNNNNGC	8 cut(s)	167, 200, 788, 1034, 1085, 1118, 1648, 1709
HpyF3I	CTNAG	3 cut(s)	1329, 1647, 1769
HpySE526I	ACGT	7 cut(s)	120, 452, 546, 1023, 1419, 1740, 1899
Hsp92I	GRCGYC	1 cut(s)	452
HspAI	GCGC	2 cut(s)	258, 899
Ksp22I	TGATCA	3 cut(s)	459, 937, 1881
Kzo9I	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
LguI	GCTCTTC	1 cut(s)	918
LmnI	GCTCC	2 cut(s)	174, 248
Lsp1109I	GCAGC	3 cut(s)	455, 1212, 1680
LweI	GCATC	4 cut(s)	517, 679, 1501, 1651
MabI	ACCWGGT	1 cut(s)	1822
MaeI	CTAG	4 cut(s)	723, 917, 1443, 1790
MaeII	ACGT	7 cut(s)	120, 452, 546, 1023, 1419, 1740, 1899
MaeIII	GTNAC	4 cut(s)	179, 848, 868, 1871
MalI	GATC	9 cut(s)	288, 345, 461, 558, 939, 1323, 1464, 1841, 1883
MbiI	CCGCTC	2 cut(s)	177, 243
MboI	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
MflI	RGATCY	3 cut(s)	286, 556, 1462
MhlI	GDGCHC	3 cut(s)	714, 913, 1284
MluCI	AATT	7 cut(s)	423, 612, 1165, 1256, 1471, 1813, 1833
MlyI	GAGTC	1 cut(s)	347
MmeI	TCCRAC	5 cut(s)	264, 652, 1440, 1609, 1920
Mph1103I	ATGCAT	3 cut(s)	532, 694, 1104
MroXI	GAANNNNTTC	1 cut(s)	413
MseI	TTAA	4 cut(s)	510, 1158, 1239, 1343
MslI	CAYNNNNRTG	2 cut(s)	371, 683
MspI	CCGG	3 cut(s)	297, 560, 1317
MspR9I	CCNGG	5 cut(s)	106, 1072, 1272, 1581, 1824
Mva1269I	GAATGC	1 cut(s)	1104
MvaI	CCWGG	5 cut(s)	106, 1072, 1272, 1581, 1824
MwoI	GCNNNNNNNGC	8 cut(s)	167, 200, 788, 1034, 1085, 1118, 1648, 1709
NcoI	CCATGG	1 cut(s)	1150
NdeII	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
NheI	GCTAGC	1 cut(s)	1789
NlaIV	GGNNCC	2 cut(s)	1387, 1464
NmeAIII	GCCGAG	1 cut(s)	254
NmuCI	GTSAC	3 cut(s)	848, 868, 1871
NsbI	TGCGCA	1 cut(s)	900
NsiI	ATGCAT	3 cut(s)	532, 694, 1104
NspI	RCATGY	3 cut(s)	376, 824, 1000
PagI	TCATGA	1 cut(s)	1809
PaqCI	CACCTGC	1 cut(s)	372
PceI	AGGCCT	1 cut(s)	320
PciI	ACATGT	2 cut(s)	372, 996
PciSI	GCTCTTC	1 cut(s)	918
PctI	GAATGC	1 cut(s)	1104
PdmI	GAANNNNTTC	1 cut(s)	413
PfeI	GAWTC	6 cut(s)	1370, 1558, 1584, 1806, 1849, 1928
PflFI	GACNNNGTC	1 cut(s)	874
PkrI	GCNGC	4 cut(s)	470, 707, 1202, 1695
PleI	GAGTC	1 cut(s)	346
PpsI	GAGTC	1 cut(s)	346
Ppu21I	YACGTR	1 cut(s)	121
PscI	ACATGT	2 cut(s)	372, 996
Psp124BI	GAGCTC	1 cut(s)	714
Psp1406I	AACGTT	1 cut(s)	1899
Psp6I	CCWGG	5 cut(s)	104, 1070, 1270, 1579, 1822
PspFI	CCCAGC	3 cut(s)	65, 905, 1514
PspGI	CCWGG	5 cut(s)	104, 1070, 1270, 1579, 1822
PspN4I	GGNNCC	2 cut(s)	1387, 1464
PspPI	GGNCC	3 cut(s)	922, 1110, 1300
PstI	CTGCAG	1 cut(s)	383
PstNI	CAGNNNCTG	2 cut(s)	1373, 1823
PsuI	RGATCY	3 cut(s)	286, 556, 1462
PsyI	GACNNNGTC	1 cut(s)	874
RsaI	GTAC	5 cut(s)	377, 933, 1481, 1821, 1828
RsaNI	GTAC	5 cut(s)	376, 932, 1480, 1820, 1827
RseI	CAYNNNNRTG	2 cut(s)	371, 683
SacI	GAGCTC	1 cut(s)	714
SapI	GCTCTTC	1 cut(s)	918
SaqAI	TTAA	4 cut(s)	510, 1158, 1239, 1343
SatI	GCNGC	4 cut(s)	469, 706, 1201, 1694
Sau3AI	GATC	9 cut(s)	286, 343, 459, 556, 937, 1321, 1462, 1839, 1881
Sau96I	GGNCC	3 cut(s)	922, 1110, 1300
SchI	GAGTC	1 cut(s)	347
ScrFI	CCNGG	5 cut(s)	106, 1072, 1272, 1581, 1824
SduI	GDGCHC	3 cut(s)	714, 913, 1284
SexAI	ACCWGGT	1 cut(s)	1822
SfaNI	GCATC	4 cut(s)	517, 679, 1501, 1651
SfcI	CTRYAG	1 cut(s)	379
SinI	GGWCC	1 cut(s)	1300
SmiMI	CAYNNNNRTG	2 cut(s)	371, 683
Sse9I	AATT	7 cut(s)	423, 612, 1165, 1256, 1471, 1813, 1833
SseBI	AGGCCT	1 cut(s)	320
SsiI	CCGC	6 cut(s)	177, 241, 387, 490, 705, 1577
SspI	AATATT	2 cut(s)	47, 74
SspMI	CTAG	4 cut(s)	723, 917, 1443, 1790
SstI	GAGCTC	1 cut(s)	714
StuI	AGGCCT	1 cut(s)	320
StyD4I	CCNGG	5 cut(s)	104, 1070, 1270, 1579, 1822
StyI	CCWWGG	3 cut(s)	321, 1113, 1150
TaaI	ACNGT	4 cut(s)	1452, 1871, 1879, 1938
TaiI	ACGT	7 cut(s)	123, 455, 549, 1026, 1422, 1743, 1902
TaqI	TCGA	5 cut(s)	189, 336, 417, 525, 1855
TaqII	GACCGA	1 cut(s)	704
TasI	AATT	7 cut(s)	423, 612, 1165, 1256, 1471, 1813, 1833
TatI	WGTACW	1 cut(s)	375
TauI	GCSGC	1 cut(s)	708
TfiI	GAWTC	6 cut(s)	1370, 1558, 1584, 1806, 1849, 1928
Tru1I	TTAA	4 cut(s)	510, 1158, 1239, 1343
Tru9I	TTAA	4 cut(s)	510, 1158, 1239, 1343
TscAI	CASTG	3 cut(s)	873, 1594, 1882
TseFI	GTSAC	3 cut(s)	848, 868, 1871
TseI	GCWGC	3 cut(s)	468, 1200, 1693
Tsp45I	GTSAC	3 cut(s)	848, 868, 1871
TspGWI	ACGGA	1 cut(s)	175
TspRI	CASTG	3 cut(s)	873, 1594, 1882
Tth111I	GACNNNGTC	1 cut(s)	874
VpaK11BI	GGWCC	1 cut(s)	1300
XapI	RAATTY	3 cut(s)	423, 1256, 1813
XceI	RCATGY	3 cut(s)	376, 824, 1000
XcmI	CCANNNNNNNNNTGG	2 cut(s)	626, 1120
XmiI	GTMKAC	1 cut(s)	980
XmnI	GAANNNNTTC	1 cut(s)	413
XspI	CTAG	4 cut(s)	723, 917, 1443, 1790
ZraI	GACGTC	1 cut(s)	453
Zsp2I	ATGCAT	3 cut(s)	532, 694, 1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.