Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0005590

Physical Location & Seq

Genomic Coordinates Reverse (-)

3534395 .. 3537381

Gene Structure 2987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g05540.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGCAAATGGATTCTAATTTAAGAGAGAAAAATCAGACCTGGTCTAATCTGTCCCCTTCTCAACCTTTGCCCCAATCACATGAATCATCACCGAGATCCCGATGGGATGATAAATTTGGTATTGGGGGACAATCGAGCAGCCCTACGTCTTATAAGCATGGAAACTCTATTGCAGAAATTACGTCCAGTCCTACATTTTCAAGGAATCAGCGTCAAACGCAACATCTGTTTAATGTACCTGGTCCATCTAATCAGACAACTTCTCCTGGTTCTGCTGCAAAGCATGCACCTTCCAACCTTGCTCTATCTCAAGATACTTCTCAGCAAATTTTTGTCAACTCTGGTGGTCAACAATTCCCTGTTCTTGAAGCTGTTCCAGTTTCTCAGCCTTCTTTTATGTCAGGCATGCCTGCACGGGTTGGATTATCAGTGAAGCCACAGAGTTTGTGGACAAAGAACCAAAGTCAGCAACATCTTTCTGGCATGGAAACTACTTCATTGGCTTCAAAGGAGCTAAATGGTCTAAATACCCAGGACGGTGGATATAGGTCATCTGAATTTGGCCATTCCCATACGAGTTTTCAAGGATTCATTTCTGCACAAGAGAAGCAGGGGGAAGAGACGACGTTTGATGCTTCACAGACAGGGGTAAGGAATGTCTCCGATCCTAGTAATTTTGCCTCTGGAACATTGTTGAATCATTCACATCTGCAGGATCTTGGTGGAATACATCGTAGTGACAGCAATGGCCTGGCTCCCTCTGCAAGAAATCTTGGATTTCTTGGCCATGCTTTAAAACATTCACATGGATTTCGTCATGACCACTCCCGGCTGCACCAAGTGCAGGATACGAAGAATGAAGAGGCTGATCCAAGTAGGATCGATCTGGATGTACAACAGATAACTGCTATGGCAGGACAGCAGTCAATTTATGGTCATAACAAGGATGGTGAACTGAATTCTCCATCAGCTCACAAGTTTTCGCCACTTGGAAATTCCAATGCGACAAATTTCCTGACGGATGCAAGAGAAGGTCCAAGTGTAAAAACTTCCTCACAATCTGCCTTCCAAGCGCAAGGCATGGTTGCATTTGGTGAAAGTGATTCTCAGAGTCCATCTATTGGCAATAATGTGTTACCTAATTATGCTGAAACTTCTCAGCCCAATCTAAGTATGGCATCGAACTGGTTTAAACAGTATGGGACCTTCAGAAATGGGCAGATGCAACCAACGTATGATGCAAGGCTTGATAGGTCTTCTGCAGGGCTGACCTCGCTTGCGAAGCCTTCGCAAAGCCTAAACATACATTCTTCTGTGGAACAGATAGATGCTTCTGATGCTAACAGAGTATGGCCAAGTACAGCTACCAATTTGGTAACAAGCGAACCCTTTGTAGCTCCCTATGTGTTACCTTCAGATGTCATTGATGAAAGTATGGCTATCGTGAGACCAAAGAAACGCAAAATTGAAACATCAGAGCTTCTACCATGGCACAAAGTGACAGAAGGTTCCAAAAGGGTTCAAGATGTCAGTCTGGCAGAGCAAGAATGGGCCTTGGCATGCAATCGGCAGACTGAGAAAGTTGGACATGAGTTTGAAATGATTGAAGATGGACTTCCAATCCTTCGATCTAAGAGAAGGCTTATCTTCACAACACAGTTTCTGCAGCAATTGCTCGGCCCTGCACCAGTATCCATTCTCTCAGCAGATGCTGCTTTGTACTATGATAGTGTGACATATTTTGTTGCTAAATTATCATTAGGGGATGCATGCACCCTGGCCTGCAGCAGCAGTACTGATGTGCCACTGAACGACAGTAATAAGATTGGGGAAAAGCCTAAAGTTTCTGAAAATACTGAAATGCAGTATTTATCAAAAGCTGTGGAAGATTTCACTAATAGATCGAAGAAGCTGGAAAATGACCTACTGAGGTTAGACAAGGTTTCAATTTTAGACTTAAGACTAGAATGCCAGGAGTTGGAAAGATTTTCTGTCATCAACCGGTTTGCCAGGTTCCATATCCCCCAAACAGCTACGTCTGGGACCACTTCTTCATCCGGTACAGTTCCAACTGCACCAAAACCATTCCCCCAACGATATGTCACTGGACAGCCGCTGCCAAGACATCTACCAGAGGGTGTTCATTGTCTGTCACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

720

Amino Acids

78.68

Weight (kDa)

6.4

Isoelectric Point (pI)

62.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005590)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29385
fragaria_vesca	FvH4_6g46950 FvH4_6g46950
malus_domestica	MD09G1065800.v1.1 MD17G1058500.v1.1
prunus_persica	Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1
pyrus_communis	pycom111g05540 pycom17g05860
rosa_chinensis	RchiOBHm_Chr2g0165931
rosa_laevigata	RLG00000021570
rosa_multiflora	Rmu_co8475311.1_g000001 Rmu_sc0006218.1_g000011
rosa_roxburghii	Rroxscaffold_2G00085300
rosa_rugosa	Rorug02G0519300
rosa_samantha	Rh2AG584900 Rh2BG596700 Rh2CG567500 Rh2DG606900
rosa_wichuraiana	Rw2G048770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	153
AccB7I	CCANNNNNTGG	2 cut(s)	1121, 1978
AciI	CCGC	1 cut(s)	2114
AclWI	GGATC	5 cut(s)	90, 659, 723, 863, 887
AcoI	YGGCCR	3 cut(s)	562, 784, 1352
AcsI	RAATTY	6 cut(s)	113, 327, 557, 958, 994, 1009
AcuI	CTGAAG	2 cut(s)	1192, 1398
AdeI	CACNNNGTG	2 cut(s)	841, 1498
AfaI	GTAC	6 cut(s)	237, 894, 1360, 1721, 1795, 2062
AfiI	CCNNNNNNNGG	3 cut(s)	844, 1121, 1978
AflII	CTTAAG	1 cut(s)	1957
AgeI	ACCGGT	1 cut(s)	2001
AjnI	CCWGG	8 cut(s)	38, 238, 265, 531, 750, 1776, 1971, 2009
AluBI	AGCT	9 cut(s)	371, 514, 971, 1364, 1397, 1480, 1880, 1912, 2033
AluI	AGCT	9 cut(s)	371, 514, 971, 1364, 1397, 1480, 1880, 1912, 2033
Alw26I	GTCTC	3 cut(s)	614, 664, 1441
AlwI	GGATC	5 cut(s)	90, 659, 723, 863, 887
AlwNI	CAGNNNCTG	3 cut(s)	1663, 1712, 2116
AoxI	GGCC	7 cut(s)	562, 748, 784, 1352, 1551, 1678, 1779
ApeKI	GCWGC	8 cut(s)	138, 275, 832, 1666, 1712, 1785, 1788, 2116
ApoI	RAATTY	6 cut(s)	113, 327, 557, 958, 994, 1009
AsiGI	ACCGGT	1 cut(s)	2001
Asp700I	GAANNNNTTC	1 cut(s)	372
AspLEI	GCGC	1 cut(s)	1075
AspS9I	GGNCC	6 cut(s)	242, 1034, 1203, 1551, 1679, 2043
AsuC2I	CCSGG	1 cut(s)	829
AsuHPI	GGTGA	3 cut(s)	81, 962, 1106
AvaII	GGWCC	4 cut(s)	242, 1034, 1203, 2043
BalI	TGGCCA	3 cut(s)	564, 786, 1354
BarI	GAAGNNNNNNTAC	2 cut(s)	1190, 1222
BbsI	GAAGAC	1 cut(s)	1248
BbvI	GCAGC	8 cut(s)	150, 262, 819, 1678, 1699, 1797, 1800, 2103
BccI	CCATC	6 cut(s)	96, 253, 941, 973, 1123, 1604
BciT130I	CCWGG	8 cut(s)	40, 240, 267, 533, 752, 1778, 1973, 2011
BciVI	GTATCC	2 cut(s)	841, 1702
BcnI	CCSGG	1 cut(s)	829
BcoDI	GTCTC	3 cut(s)	614, 664, 1441
BfaI	CTAG	2 cut(s)	669, 1964
BfmI	CTRYAG	4 cut(s)	710, 1260, 1664, 1783
BfrI	CTTAAG	1 cut(s)	1957
BfuI	GTATCC	2 cut(s)	841, 1702
BisI	GCNGC	9 cut(s)	139, 276, 833, 1667, 1713, 1786, 1789, 2114, 2117
BlsI	GCNGC	9 cut(s)	140, 277, 834, 1668, 1714, 1787, 1790, 2115, 2118
BmcAI	AGTACT	1 cut(s)	1795
Bme1390I	CCNGG	9 cut(s)	40, 240, 267, 533, 752, 829, 1778, 1973, 2011
Bme18I	GGWCC	4 cut(s)	242, 1034, 1203, 2043
BmgT120I	GGNCC	6 cut(s)	242, 1034, 1203, 1551, 1679, 2043
BmiI	GGNNCC	5 cut(s)	756, 1204, 1510, 2015, 2044
BmrFI	CCNGG	9 cut(s)	40, 240, 267, 533, 752, 829, 1778, 1973, 2011
BmsI	GCATC	9 cut(s)	622, 1012, 1187, 1212, 1228, 1318, 1327, 1699, 1756
BoxI	GACNNNNGTC	1 cut(s)	922
BpiI	GAAGAC	1 cut(s)	1248
BpuEI	CTTGAG	1 cut(s)	294
BpuMI	CCSGG	1 cut(s)	829
Bsa29I	ATCGAT	1 cut(s)	882
BsaI	GGTCTC	1 cut(s)	1441
BsaJI	CCNNGG	4 cut(s)	531, 1487, 1554, 1776
BsaWI	WCCGGW	2 cut(s)	2001, 2057
BsaXI	ACNNNNNCTCC	2 cut(s)	247, 277
Bsc4I	CCNNNNNNNGG	3 cut(s)	844, 1121, 1978
Bse118I	RCCGGY	1 cut(s)	2001
Bse1I	ACTGG	5 cut(s)	186, 377, 1190, 1688, 2110
Bse3DI	GCAATG	1 cut(s)	751
BseBI	CCWGG	8 cut(s)	40, 240, 267, 533, 752, 1778, 1973, 2011
BseCI	ATCGAT	1 cut(s)	882
BseDI	CCNNGG	4 cut(s)	531, 1487, 1554, 1776
BseGI	GGATG	6 cut(s)	112, 895, 952, 1027, 1771, 2054
BseLI	CCNNNNNNNGG	3 cut(s)	844, 1121, 1978
BseMI	GCAATG	1 cut(s)	751
BseMII	CTCAG	7 cut(s)	335, 398, 1121, 1172, 1566, 1716, 1919
BseNI	ACTGG	5 cut(s)	186, 377, 1190, 1688, 2110
BseXI	GCAGC	8 cut(s)	150, 262, 819, 1678, 1699, 1797, 1800, 2103
BsgI	GTGCAG	6 cut(s)	396, 582, 818, 863, 1668, 2058
BshFI	GGCC	7 cut(s)	564, 750, 786, 1354, 1553, 1680, 1781
BshTI	ACCGGT	1 cut(s)	2001
BshVI	ATCGAT	1 cut(s)	882
BsiSI	CCGG	3 cut(s)	829, 2002, 2058
BslFI	GGGAC	4 cut(s)	37, 141, 1216, 2056
BslI	CCNNNNNNNGG	3 cut(s)	844, 1121, 1978
BsmAI	GTCTC	3 cut(s)	614, 664, 1441
BsmBI	CGTCTC	1 cut(s)	614
BsmFI	GGGAC	4 cut(s)	37, 141, 1216, 2056
BsmI	GAATGC	1 cut(s)	1973
BsnI	GGCC	7 cut(s)	564, 750, 786, 1354, 1553, 1680, 1781
Bso31I	GGTCTC	1 cut(s)	1441
Bsp1407I	TGTACA	1 cut(s)	892
Bsp143I	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
Bsp19I	CCATGG	1 cut(s)	1487
BspACI	CCGC	1 cut(s)	2114
BspANI	GGCC	7 cut(s)	564, 750, 786, 1354, 1553, 1680, 1781
BspCNI	CTCAG	7 cut(s)	334, 397, 1120, 1171, 1567, 1715, 1920
BspDI	ATCGAT	1 cut(s)	882
BspHI	TCATGA	1 cut(s)	817
BspLI	GGNNCC	5 cut(s)	756, 1204, 1510, 2015, 2044
BspMAI	CTGCAG	4 cut(s)	714, 1264, 1668, 1787
BspPI	GGATC	5 cut(s)	90, 659, 723, 863, 887
BspTI	CTTAAG	1 cut(s)	1957
BspTNI	GGTCTC	1 cut(s)	1441
BsrDI	GCAATG	1 cut(s)	751
BsrFI	RCCGGY	1 cut(s)	2001
BsrGI	TGTACA	1 cut(s)	892
BsrI	ACTGG	5 cut(s)	186, 377, 1190, 1688, 2110
BssAI	RCCGGY	1 cut(s)	2001
BssECI	CCNNGG	4 cut(s)	531, 1487, 1554, 1776
BssMI	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
BssT1I	CCWWGG	2 cut(s)	1487, 1554
Bst2UI	CCWGG	8 cut(s)	40, 240, 267, 533, 752, 1778, 1973, 2011
Bst4CI	ACNGT	5 cut(s)	539, 1197, 1659, 1817, 2065
Bst6I	CTCTTC	2 cut(s)	612, 855
BstAFI	CTTAAG	1 cut(s)	1957
BstAPI	GCANNNNNTGC	4 cut(s)	284, 841, 1672, 1712
BstAUI	TGTACA	1 cut(s)	892
BstC8I	GCNNGC	7 cut(s)	285, 407, 411, 1278, 1561, 1771, 1783
BstDEI	CTNAG	9 cut(s)	321, 384, 1107, 1158, 1169, 1575, 1632, 1702, 1928
BstDSI	CCRYGG	1 cut(s)	1487
BstF5I	GGATG	6 cut(s)	112, 895, 952, 1027, 1771, 2054
BstHHI	GCGC	1 cut(s)	1075
BstKTI	GATC	8 cut(s)	98, 667, 718, 871, 882, 886, 1631, 1904
BstMAI	GTCTC	3 cut(s)	614, 664, 1441
BstMBI	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
BstNI	CCWGG	8 cut(s)	40, 240, 267, 533, 752, 1778, 1973, 2011
BstNSI	RCATGY	4 cut(s)	287, 409, 1563, 1773
BstPAI	GACNNNNGTC	1 cut(s)	922
BstSCI	CCNGG	9 cut(s)	38, 238, 265, 531, 750, 827, 1776, 1971, 2009
BstSFI	CTRYAG	4 cut(s)	710, 1260, 1664, 1783
BstV1I	GCAGC	8 cut(s)	150, 262, 819, 1678, 1699, 1797, 1800, 2103
BstV2I	GAAGAC	1 cut(s)	1248
BstX2I	RGATCY	2 cut(s)	95, 715
BstXI	CCANNNNNNTGG	1 cut(s)	539
BstYI	RGATCY	2 cut(s)	95, 715
Bsu15I	ATCGAT	1 cut(s)	882
BsuI	GTATCC	2 cut(s)	841, 1702
BsuRI	GGCC	7 cut(s)	564, 750, 786, 1354, 1553, 1680, 1781
BsuTUI	ATCGAT	1 cut(s)	882
BtgI	CCRYGG	1 cut(s)	1487
BtsCI	GGATG	6 cut(s)	112, 895, 952, 1027, 1771, 2054
BtsIMutI	CAGTG	3 cut(s)	435, 1805, 2103
Cac8I	GCNNGC	7 cut(s)	285, 407, 411, 1278, 1561, 1771, 1783
CaiI	CAGNNNCTG	3 cut(s)	1663, 1712, 2116
CciI	TCATGA	1 cut(s)	817
CfoI	GCGC	1 cut(s)	1075
Cfr10I	RCCGGY	1 cut(s)	2001
Cfr13I	GGNCC	6 cut(s)	242, 1034, 1203, 1551, 1679, 2043
ClaI	ATCGAT	1 cut(s)	882
CseI	GACGC	1 cut(s)	200
CsiI	ACCWGGT	2 cut(s)	38, 238
Csp6I	GTAC	6 cut(s)	236, 893, 1359, 1720, 1794, 2061
CspAI	ACCGGT	1 cut(s)	2001
CspCI	CAANNNNNGTGG	6 cut(s)	325, 360, 426, 461, 1863, 1898
CviQI	GTAC	6 cut(s)	236, 893, 1359, 1720, 1794, 2061
DdeI	CTNAG	9 cut(s)	321, 384, 1107, 1158, 1169, 1575, 1632, 1702, 1928
DpnI	GATC	8 cut(s)	97, 666, 717, 870, 881, 885, 1630, 1903
DpnII	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
DraI	TTTAAA	2 cut(s)	795, 1192
DraIII	CACNNNGTG	2 cut(s)	841, 1498
EaeI	YGGCCR	3 cut(s)	562, 784, 1352
Eam1104I	CTCTTC	2 cut(s)	612, 855
EarI	CTCTTC	2 cut(s)	612, 855
Eco130I	CCWWGG	2 cut(s)	1487, 1554
Eco31I	GGTCTC	1 cut(s)	1441
Eco47I	GGWCC	4 cut(s)	242, 1034, 1203, 2043
Eco57I	CTGAAG	2 cut(s)	1192, 1398
EcoO109I	RGGNCCY	1 cut(s)	1203
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	8 cut(s)	38, 238, 265, 531, 750, 1776, 1971, 2009
EcoT14I	CCWWGG	2 cut(s)	1487, 1554
EcoT22I	ATGCAT	1 cut(s)	1771
ErhI	CCWWGG	2 cut(s)	1487, 1554
Esp3I	CGTCTC	1 cut(s)	614
FalI	AAGNNNNNCTT	2 cut(s)	1599, 1631
FaqI	GGGAC	4 cut(s)	37, 141, 1216, 2056
Fnu4HI	GCNGC	9 cut(s)	139, 276, 833, 1667, 1713, 1786, 1789, 2114, 2117
FokI	GGATG	6 cut(s)	119, 902, 959, 1034, 1778, 2041
Fsp4HI	GCNGC	9 cut(s)	139, 276, 833, 1667, 1713, 1786, 1789, 2114, 2117
FspBI	CTAG	2 cut(s)	669, 1964
GlaI	GCGC	1 cut(s)	1074
GluI	GCNGC	9 cut(s)	139, 276, 833, 1667, 1713, 1786, 1789, 2114, 2117
HaeIII	GGCC	7 cut(s)	564, 750, 786, 1354, 1553, 1680, 1781
HapII	CCGG	3 cut(s)	829, 2002, 2058
HgaI	GACGC	1 cut(s)	200
HhaI	GCGC	1 cut(s)	1075
Hin6I	GCGC	1 cut(s)	1073
HinP1I	GCGC	1 cut(s)	1073
HincII	GTYRAC	2 cut(s)	337, 350
HindII	GTYRAC	2 cut(s)	337, 350
HinfI	GANTC	7 cut(s)	11, 83, 205, 588, 697, 1103, 1111
HpaII	CCGG	3 cut(s)	829, 2002, 2058
HphI	GGTGA	3 cut(s)	81, 962, 1106
Hpy166II	GTNNAC	4 cut(s)	337, 350, 450, 953
Hpy188III	TCNNGA	9 cut(s)	99, 311, 365, 684, 818, 887, 1015, 1444, 1523
Hpy8I	GTNNAC	4 cut(s)	337, 350, 450, 953
Hpy99I	CGWCG	1 cut(s)	628
HpyCH4III	ACNGT	5 cut(s)	539, 1197, 1659, 1817, 2065
HpyCH4IV	ACGT	5 cut(s)	146, 182, 626, 1232, 2036
HpyF3I	CTNAG	9 cut(s)	321, 384, 1107, 1158, 1169, 1575, 1632, 1702, 1928
HpySE526I	ACGT	5 cut(s)	146, 182, 626, 1232, 2036
HspAI	GCGC	1 cut(s)	1073
Kzo9I	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
LmnI	GCTCC	3 cut(s)	511, 760, 1402
Lsp1109I	GCAGC	8 cut(s)	150, 262, 819, 1678, 1699, 1797, 1800, 2103
LweI	GCATC	9 cut(s)	622, 1012, 1187, 1212, 1228, 1318, 1327, 1699, 1756
MabI	ACCWGGT	2 cut(s)	38, 238
MaeI	CTAG	2 cut(s)	669, 1964
MaeII	ACGT	5 cut(s)	146, 182, 626, 1232, 2036
MaeIII	GTNAC	8 cut(s)	737, 1134, 1375, 1407, 1498, 1732, 2101, 2151
MalI	GATC	8 cut(s)	97, 666, 717, 870, 881, 885, 1630, 1903
MboI	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
MfeI	CAATTG	1 cut(s)	1670
MflI	RGATCY	2 cut(s)	95, 715
MlsI	TGGCCA	3 cut(s)	564, 786, 1354
MluNI	TGGCCA	3 cut(s)	564, 786, 1354
MlyI	GAGTC	1 cut(s)	1120
MmeI	TCCRAC	5 cut(s)	318, 400, 1564, 1959, 2093
MnlI	CCTC	7 cut(s)	691, 769, 856, 1063, 1282, 1923, 2128
Mox20I	TGGCCA	3 cut(s)	564, 786, 1354
Mph1103I	ATGCAT	1 cut(s)	1771
MroXI	GAANNNNTTC	1 cut(s)	372
MscI	TGGCCA	3 cut(s)	564, 786, 1354
MseI	TTAA	5 cut(s)	20, 231, 794, 1191, 1958
MslI	CAYNNNNRTG	2 cut(s)	735, 804
Msp20I	TGGCCA	3 cut(s)	564, 786, 1354
MspA1I	CMGCKG	1 cut(s)	2116
MspCI	CTTAAG	1 cut(s)	1957
MspI	CCGG	3 cut(s)	829, 2002, 2058
MspR9I	CCNGG	9 cut(s)	40, 240, 267, 533, 752, 829, 1778, 1973, 2011
MssI	GTTTAAAC	1 cut(s)	1192
MunI	CAATTG	1 cut(s)	1670
Mva1269I	GAATGC	1 cut(s)	1973
MvaI	CCWGG	8 cut(s)	40, 240, 267, 533, 752, 1778, 1973, 2011
NciI	CCSGG	1 cut(s)	829
NcoI	CCATGG	1 cut(s)	1487
NdeII	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
NlaIV	GGNNCC	5 cut(s)	756, 1204, 1510, 2015, 2044
NmeAIII	GCCGAG	1 cut(s)	1656
NmuCI	GTSAC	5 cut(s)	737, 1498, 1732, 2101, 2151
NsiI	ATGCAT	1 cut(s)	1771
NspI	RCATGY	4 cut(s)	287, 409, 1563, 1773
PaeI	GCATGC	4 cut(s)	287, 409, 1563, 1773
PagI	TCATGA	1 cut(s)	817
PctI	GAATGC	1 cut(s)	1973
PdmI	GAANNNNTTC	1 cut(s)	372
PfeI	GAWTC	6 cut(s)	11, 83, 205, 588, 697, 1103
PflFI	GACNNNGTC	1 cut(s)	40
PflMI	CCANNNNNTGG	2 cut(s)	1121, 1978
PinAI	ACCGGT	1 cut(s)	2001
PkrI	GCNGC	9 cut(s)	140, 277, 834, 1668, 1714, 1787, 1790, 2115, 2118
PleI	GAGTC	1 cut(s)	1119
PmeI	GTTTAAAC	1 cut(s)	1192
PpsI	GAGTC	1 cut(s)	1119
PpuMI	RGGWCCY	1 cut(s)	1203
PshAI	GACNNNNGTC	1 cut(s)	922
PsiI	TTATAA	1 cut(s)	153
Psp5II	RGGWCCY	1 cut(s)	1203
Psp6I	CCWGG	8 cut(s)	38, 238, 265, 531, 750, 1776, 1971, 2009
PspGI	CCWGG	8 cut(s)	38, 238, 265, 531, 750, 1776, 1971, 2009
PspN4I	GGNNCC	5 cut(s)	756, 1204, 1510, 2015, 2044
PspPI	GGNCC	6 cut(s)	242, 1034, 1203, 1551, 1679, 2043
PspPPI	RGGWCCY	1 cut(s)	1203
PstI	CTGCAG	4 cut(s)	714, 1264, 1668, 1787
PstNI	CAGNNNCTG	3 cut(s)	1663, 1712, 2116
PsuI	RGATCY	2 cut(s)	95, 715
PsyI	GACNNNGTC	1 cut(s)	40
RsaI	GTAC	6 cut(s)	237, 894, 1360, 1721, 1795, 2062
RsaNI	GTAC	6 cut(s)	236, 893, 1359, 1720, 1794, 2061
RseI	CAYNNNNRTG	2 cut(s)	735, 804
SaqAI	TTAA	5 cut(s)	20, 231, 794, 1191, 1958
SatI	GCNGC	9 cut(s)	139, 276, 833, 1667, 1713, 1786, 1789, 2114, 2117
Sau3AI	GATC	8 cut(s)	95, 664, 715, 868, 879, 883, 1628, 1901
Sau96I	GGNCC	6 cut(s)	242, 1034, 1203, 1551, 1679, 2043
ScaI	AGTACT	1 cut(s)	1795
SchI	GAGTC	1 cut(s)	1120
ScrFI	CCNGG	9 cut(s)	40, 240, 267, 533, 752, 829, 1778, 1973, 2011
SexAI	ACCWGGT	2 cut(s)	38, 238
SfaNI	GCATC	9 cut(s)	622, 1012, 1187, 1212, 1228, 1318, 1327, 1699, 1756
SfcI	CTRYAG	4 cut(s)	710, 1260, 1664, 1783
SinI	GGWCC	4 cut(s)	242, 1034, 1203, 2043
SmiMI	CAYNNNNRTG	2 cut(s)	735, 804
SmlI	CTYRAG	2 cut(s)	309, 1957
SmoI	CTYRAG	2 cut(s)	309, 1957
SphI	GCATGC	4 cut(s)	287, 409, 1563, 1773
SsiI	CCGC	1 cut(s)	2114
SspMI	CTAG	2 cut(s)	669, 1964
StyD4I	CCNGG	9 cut(s)	38, 238, 265, 531, 750, 827, 1776, 1971, 2009
StyI	CCWWGG	2 cut(s)	1487, 1554
TaaI	ACNGT	5 cut(s)	539, 1197, 1659, 1817, 2065
TaiI	ACGT	5 cut(s)	149, 185, 629, 1235, 2039
TaqI	TCGA	5 cut(s)	134, 882, 1181, 1627, 1904
TatI	WGTACW	4 cut(s)	892, 1358, 1719, 1793
TauI	GCSGC	1 cut(s)	2116
TfiI	GAWTC	6 cut(s)	11, 83, 205, 588, 697, 1103
Tru1I	TTAA	5 cut(s)	20, 231, 794, 1191, 1958
Tru9I	TTAA	5 cut(s)	20, 231, 794, 1191, 1958
TscAI	CASTG	3 cut(s)	435, 1812, 2110
TseFI	GTSAC	5 cut(s)	737, 1498, 1732, 2101, 2151
TseI	GCWGC	8 cut(s)	138, 275, 832, 1666, 1712, 1785, 1788, 2116
Tsp45I	GTSAC	5 cut(s)	737, 1498, 1732, 2101, 2151
TspDTI	ATGAA	7 cut(s)	96, 486, 580, 873, 1443, 2043, 2132
TspGWI	ACGGA	1 cut(s)	1034
TspRI	CASTG	3 cut(s)	435, 1812, 2110
Tth111I	GACNNNGTC	1 cut(s)	40
Van91I	CCANNNNNTGG	2 cut(s)	1121, 1978
Vha464I	CTTAAG	1 cut(s)	1957
VpaK11BI	GGWCC	4 cut(s)	242, 1034, 1203, 2043
XapI	RAATTY	6 cut(s)	113, 327, 557, 958, 994, 1009
XceI	RCATGY	4 cut(s)	287, 409, 1563, 1773
XcmI	CCANNNNNNNNNTGG	2 cut(s)	444, 1171
XmnI	GAANNNNTTC	1 cut(s)	372
XspI	CTAG	2 cut(s)	669, 1964
ZrmI	AGTACT	1 cut(s)	1795
Zsp2I	ATGCAT	1 cut(s)	1771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.