isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29385 |
| fragaria_vesca | FvH4_6g46950 FvH4_6g46950 |
| malus_domestica | MD09G1065800.v1.1 MD17G1058500.v1.1 |
| prunus_persica | Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 Prupe.3G255600_v2.0.a1 |
| pyrus_communis | pycom111g05540 pycom17g05860 |
| rosa_chinensis | RchiOBHm_Chr2g0165931 |
| rosa_laevigata | RLG00000021570 |
| rosa_multiflora | Rmu_co8475311.1_g000001 Rmu_sc0006218.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00085300 |
| rosa_rugosa | Rorug02G0519300 |
| rosa_samantha | Rh2AG584900 Rh2BG596700 Rh2CG567500 Rh2DG606900 |
| rosa_wichuraiana | Rw2G048770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 4698 |
| AatII | GACGTC | 1 cut(s) | 2480 |
| Acc16I | TGCGCA | 1 cut(s) | 1044 |
| Acc36I | ACCTGC | 3 cut(s) | 1617, 2959, 4511 |
| AccB1I | GGYRCC | 2 cut(s) | 2405, 3946 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3104, 4159 |
| AccI | GTMKAC | 1 cut(s) | 1495 |
| AciI | CCGC | 7 cut(s) | 77, 1889, 3122, 3779, 4128, 4337, 4404 |
| AclI | AACGTT | 1 cut(s) | 2945 |
| AcoI | YGGCCR | 3 cut(s) | 3508, 4076, 4467 |
| AcsI | RAATTY | 7 cut(s) | 688, 1000, 2092, 3256, 3682, 3928, 4135 |
| AcuI | CTGAAG | 5 cut(s) | 314, 510, 626, 3274, 3894 |
| AcyI | GRCGYC | 2 cut(s) | 2477, 4280 |
| AdeI | CACNNNGTG | 3 cut(s) | 3104, 3565, 4887 |
| AfeI | AGCGCT | 1 cut(s) | 1871 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1327, 1328, 3049, 3101, 3104, 3530, 3568, 4159 |
| AflII | CTTAAG | 1 cut(s) | 4526 |
| AgeI | ACCGGT | 1 cut(s) | 1490 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 537, 569, 4006, 4038 |
| Alw21I | GWGCWC | 2 cut(s) | 371, 1453 |
| Alw44I | GTGCAC | 1 cut(s) | 1449 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1333, 4433 |
| Ama87I | CYCGRG | 3 cut(s) | 1829, 3882, 4755 |
| Aor51HI | AGCGCT | 1 cut(s) | 1871 |
| AoxI | GGCC | 9 cut(s) | 89, 541, 1283, 1318, 3119, 3508, 4076, 4399, 4467 |
| ApaLI | GTGCAC | 1 cut(s) | 1449 |
| ApoI | RAATTY | 7 cut(s) | 688, 1000, 2092, 3256, 3682, 3928, 4135 |
| AseI | ATTAAT | 2 cut(s) | 753, 1950 |
| AsiGI | ACCGGT | 1 cut(s) | 1490 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1758 |
| AspLEI | GCGC | 4 cut(s) | 879, 1045, 1872, 2162 |
| AspS9I | GGNCC | 6 cut(s) | 541, 1319, 2396, 2927, 4033, 4400 |
| AsuC2I | CCSGG | 1 cut(s) | 1179 |
| AsuII | TTCGAA | 4 cut(s) | 158, 2878, 3314, 3428 |
| AvaI | CYCGRG | 3 cut(s) | 1829, 3882, 4755 |
| AvaII | GGWCC | 3 cut(s) | 2396, 2927, 4033 |
| BaeGI | GKGCMC | 2 cut(s) | 1453, 2410 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1998, 2031 |
| BalI | TGGCCA | 3 cut(s) | 3510, 4078, 4469 |
| BamHI | GGATCC | 3 cut(s) | 27, 1393, 3439 |
| BanI | GGYRCC | 2 cut(s) | 2405, 3946 |
| BanII | GRGCYC | 1 cut(s) | 2779 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1540, 1572 |
| BbsI | GAAGAC | 6 cut(s) | 302, 1533, 3527, 4272, 4366, 4467 |
| Bbv12I | GWGCWC | 2 cut(s) | 371, 1453 |
| BbvCI | CCTCAGC | 2 cut(s) | 897, 3006 |
| BccI | CCATC | 9 cut(s) | 74, 423, 978, 1973, 2740, 3023, 3665, 3799, 4755 |
| BceAI | ACGGC | 2 cut(s) | 3501, 4101 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1865, 1899, 3518, 3552 |
| BciVI | GTATCC | 2 cut(s) | 922, 2065 |
| BclI | TGATCA | 4 cut(s) | 226, 1078, 2557, 3658 |
| BcnI | CCSGG | 1 cut(s) | 1179 |
| BfaI | CTAG | 8 cut(s) | 47, 936, 1017, 1343, 1479, 2061, 2211, 2400 |
| BfmI | CTRYAG | 7 cut(s) | 659, 708, 1247, 2376, 2544, 3975, 4504 |
| BfoI | RGCGCY | 1 cut(s) | 1873 |
| BfrI | CTTAAG | 1 cut(s) | 4526 |
| BfuAI | ACCTGC | 3 cut(s) | 1617, 2959, 4511 |
| BfuI | GTATCC | 2 cut(s) | 922, 2065 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 549 |
| BlpI | GCTNAGC | 1 cut(s) | 717 |
| BmcAI | AGTACT | 1 cut(s) | 4522 |
| Bme18I | GGWCC | 3 cut(s) | 2396, 2927, 4033 |
| BmeT110I | CYCGRG | 3 cut(s) | 1829, 3882, 4755 |
| BmgT120I | GGNCC | 6 cut(s) | 541, 1319, 2396, 2927, 4033, 4400 |
| BmrI | ACTGGG | 2 cut(s) | 2493, 4279 |
| BmuI | ACTGGG | 2 cut(s) | 2493, 4279 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3646 |
| BpiI | GAAGAC | 6 cut(s) | 302, 1533, 3527, 4272, 4366, 4467 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1716, 1748 |
| BpmI | CTGGAG | 4 cut(s) | 959, 1077, 1465, 3282 |
| Bpu10I | CCTNAGC | 2 cut(s) | 897, 3006 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 717 |
| Bpu14I | TTCGAA | 4 cut(s) | 158, 2878, 3314, 3428 |
| BpuMI | CCSGG | 1 cut(s) | 1179 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4056 |
| BsaHI | GRCGYC | 2 cut(s) | 2477, 4280 |
| BsaI | GGTCTC | 2 cut(s) | 247, 4165 |
| BsaJI | CCNNGG | 7 cut(s) | 1200, 1681, 2010, 2771, 3368, 3483, 4208 |
| BsaWI | WCCGGW | 1 cut(s) | 1490 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1327, 1328, 3049, 3101, 3104, 3530, 3568, 4159 |
| Bse118I | RCCGGY | 1 cut(s) | 1490 |
| Bse3DI | GCAATG | 4 cut(s) | 208, 1420, 3579, 4844 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4056 |
| BseDI | CCNNGG | 7 cut(s) | 1200, 1681, 2010, 2771, 3368, 3483, 4208 |
| BseJI | GATNNNNATC | 1 cut(s) | 4056 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1327, 1328, 3049, 3101, 3104, 3530, 3568, 4159 |
| BseMI | GCAATG | 4 cut(s) | 208, 1420, 3579, 4844 |
| BseRI | GAGGAG | 5 cut(s) | 885, 1517, 2237, 2994, 3780 |
| BseSI | GKGCMC | 2 cut(s) | 1453, 2410 |
| BseYI | CCCAGC | 2 cut(s) | 728, 2781 |
| BsgI | GTGCAG | 5 cut(s) | 821, 1595, 3542, 3587, 4424 |
| BshFI | GGCC | 9 cut(s) | 91, 543, 1285, 1320, 3121, 3510, 4078, 4401, 4469 |
| BshNI | GGYRCC | 2 cut(s) | 2405, 3946 |
| BshTI | ACCGGT | 1 cut(s) | 1490 |
| BsiHKAI | GWGCWC | 2 cut(s) | 371, 1453 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1829, 3882, 4755 |
| BsiSI | CCGG | 2 cut(s) | 1178, 1491 |
| BslFI | GGGAC | 5 cut(s) | 435, 2312, 2820, 3871, 4803 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1327, 1328, 3049, 3101, 3104, 3530, 3568, 4159 |
| BsmBI | CGTCTC | 2 cut(s) | 2468, 2622 |
| BsmFI | GGGAC | 5 cut(s) | 435, 2312, 2820, 3871, 4803 |
| BsmI | GAATGC | 5 cut(s) | 552, 1228, 1701, 3310, 3354 |
| BsnI | GGCC | 9 cut(s) | 91, 543, 1285, 1320, 3121, 3510, 4078, 4401, 4469 |
| Bso31I | GGTCTC | 2 cut(s) | 247, 4165 |
| BsoBI | CYCGRG | 3 cut(s) | 1829, 3882, 4755 |
| Bsp119I | TTCGAA | 4 cut(s) | 158, 2878, 3314, 3428 |
| Bsp1286I | GDGCHC | 4 cut(s) | 371, 1453, 2410, 2779 |
| Bsp1407I | TGTACA | 2 cut(s) | 1962, 2565 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 717 |
| Bsp19I | CCATGG | 1 cut(s) | 4208 |
| BspACI | CCGC | 7 cut(s) | 77, 1889, 3122, 3779, 4128, 4337, 4404 |
| BspANI | GGCC | 9 cut(s) | 91, 543, 1285, 1320, 3121, 3510, 4078, 4401, 4469 |
| BspHI | TCATGA | 1 cut(s) | 1750 |
| BspMAI | CTGCAG | 4 cut(s) | 712, 1251, 3979, 4508 |
| BspMI | ACCTGC | 3 cut(s) | 1617, 2959, 4511 |
| BspQI | GCTCTTC | 1 cut(s) | 3297 |
| BspT104I | TTCGAA | 4 cut(s) | 158, 2878, 3314, 3428 |
| BspT107I | GGYRCC | 2 cut(s) | 2405, 3946 |
| BspTI | CTTAAG | 1 cut(s) | 4526 |
| BspTNI | GGTCTC | 2 cut(s) | 247, 4165 |
| BsrDI | GCAATG | 4 cut(s) | 208, 1420, 3579, 4844 |
| BsrFI | RCCGGY | 1 cut(s) | 1490 |
| BsrGI | TGTACA | 2 cut(s) | 1962, 2565 |
| BssAI | RCCGGY | 1 cut(s) | 1490 |
| BssECI | CCNNGG | 7 cut(s) | 1200, 1681, 2010, 2771, 3368, 3483, 4208 |
| BssNI | GRCGYC | 2 cut(s) | 2477, 4280 |
| BssT1I | CCWWGG | 3 cut(s) | 1200, 2771, 4208 |
| Bst6I | CTCTTC | 4 cut(s) | 1350, 1627, 1988, 3297 |
| BstACI | GRCGYC | 2 cut(s) | 2477, 4280 |
| BstAFI | CTTAAG | 1 cut(s) | 4526 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 604, 3565, 3971, 4393, 4433 |
| BstAUI | TGTACA | 2 cut(s) | 1962, 2565 |
| BstBI | TTCGAA | 4 cut(s) | 158, 2878, 3314, 3428 |
| BstDSI | CCRYGG | 2 cut(s) | 3483, 4208 |
| BstH2I | RGCGCY | 1 cut(s) | 1873 |
| BstHHI | GCGC | 4 cut(s) | 879, 1045, 1872, 2162 |
| BstNSI | RCATGY | 4 cut(s) | 1651, 2921, 3094, 4494 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3646 |
| BstSFI | CTRYAG | 7 cut(s) | 659, 708, 1247, 2376, 2544, 3975, 4504 |
| BstSLI | GKGCMC | 2 cut(s) | 1453, 2410 |
| BstV2I | GAAGAC | 6 cut(s) | 302, 1533, 3527, 4272, 4366, 4467 |
| BstX2I | RGATCY | 8 cut(s) | 27, 206, 1193, 1345, 1393, 3439, 3607, 3757 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3506 |
| BstYI | RGATCY | 8 cut(s) | 27, 206, 1193, 1345, 1393, 3439, 3607, 3757 |
| BsuI | GTATCC | 2 cut(s) | 922, 2065 |
| BsuRI | GGCC | 9 cut(s) | 91, 543, 1285, 1320, 3121, 3510, 4078, 4401, 4469 |
| BtgI | CCRYGG | 2 cut(s) | 3483, 4208 |
| BveI | ACCTGC | 3 cut(s) | 1617, 2959, 4511 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1333, 4433 |
| CciI | TCATGA | 1 cut(s) | 1750 |
| CfoI | GCGC | 4 cut(s) | 879, 1045, 1872, 2162 |
| Cfr10I | RCCGGY | 1 cut(s) | 1490 |
| Cfr13I | GGNCC | 6 cut(s) | 541, 1319, 2396, 2927, 4033, 4400 |
| CseI | GACGC | 1 cut(s) | 4269 |
| CsiI | ACCWGGT | 1 cut(s) | 3561 |
| CspAI | ACCGGT | 1 cut(s) | 1490 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 4590, 4625 |
| DraI | TTTAAA | 1 cut(s) | 1185 |
| DraIII | CACNNNGTG | 3 cut(s) | 3104, 3565, 4887 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4698 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4698 |
| EaeI | YGGCCR | 3 cut(s) | 3508, 4076, 4467 |
| Eam1104I | CTCTTC | 4 cut(s) | 1350, 1627, 1988, 3297 |
| EarI | CTCTTC | 4 cut(s) | 1350, 1627, 1988, 3297 |
| Eco130I | CCWWGG | 3 cut(s) | 1200, 2771, 4208 |
| Eco24I | GRGCYC | 1 cut(s) | 2779 |
| Eco31I | GGTCTC | 2 cut(s) | 247, 4165 |
| Eco32I | GATATC | 1 cut(s) | 4165 |
| Eco47I | GGWCC | 3 cut(s) | 2396, 2927, 4033 |
| Eco47III | AGCGCT | 1 cut(s) | 1871 |
| Eco57I | CTGAAG | 5 cut(s) | 314, 510, 626, 3274, 3894 |
| Eco88I | CYCGRG | 3 cut(s) | 1829, 3882, 4755 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2927 |
| EcoRI | GAATTC | 3 cut(s) | 688, 3682, 4135 |
| EcoRV | GATATC | 1 cut(s) | 4165 |
| EcoT14I | CCWWGG | 3 cut(s) | 1200, 2771, 4208 |
| EcoT22I | ATGCAT | 5 cut(s) | 439, 2838, 2923, 4492, 4807 |
| EcoT38I | GRGCYC | 1 cut(s) | 2779 |
| ErhI | CCWWGG | 3 cut(s) | 1200, 2771, 4208 |
| Esp3I | CGTCTC | 2 cut(s) | 2468, 2622 |
| FaqI | GGGAC | 5 cut(s) | 435, 2312, 2820, 3871, 4803 |
| FauI | CCCGC | 2 cut(s) | 4121, 4411 |
| FauNDI | CATATG | 3 cut(s) | 2100, 2311, 2347 |
| FbaI | TGATCA | 4 cut(s) | 226, 1078, 2557, 3658 |
| FblI | GTMKAC | 1 cut(s) | 1495 |
| FriOI | GRGCYC | 1 cut(s) | 2779 |
| FspBI | CTAG | 8 cut(s) | 47, 936, 1017, 1343, 1479, 2061, 2211, 2400 |
| FspI | TGCGCA | 1 cut(s) | 1044 |
| GlaI | GCGC | 4 cut(s) | 878, 1044, 1871, 2161 |
| GsaI | CCCAGC | 2 cut(s) | 732, 2785 |
| GsuI | CTGGAG | 4 cut(s) | 959, 1077, 1465, 3282 |
| HaeII | RGCGCY | 1 cut(s) | 1873 |
| HaeIII | GGCC | 9 cut(s) | 91, 543, 1285, 1320, 3121, 3510, 4078, 4401, 4469 |
| HapII | CCGG | 2 cut(s) | 1178, 1491 |
| HgaI | GACGC | 1 cut(s) | 4269 |
| HhaI | GCGC | 4 cut(s) | 879, 1045, 1872, 2162 |
| Hin1I | GRCGYC | 2 cut(s) | 2477, 4280 |
| Hin6I | GCGC | 4 cut(s) | 877, 1043, 1870, 2160 |
| HinP1I | GCGC | 4 cut(s) | 877, 1043, 1870, 2160 |
| HincII | GTYRAC | 5 cut(s) | 769, 1008, 2461, 3022, 3035 |
| HindII | GTYRAC | 5 cut(s) | 769, 1008, 2461, 3022, 3035 |
| HindIII | AAGCTT | 4 cut(s) | 492, 2183, 3771, 3876 |
| HpaI | GTTAAC | 1 cut(s) | 769 |
| HpaII | CCGG | 2 cut(s) | 1178, 1491 |
| Hpy99I | CGWCG | 1 cut(s) | 3529 |
| HpyCH4IV | ACGT | 2 cut(s) | 2477, 2945 |
| HpySE526I | ACGT | 2 cut(s) | 2477, 2945 |
| Hsp92I | GRCGYC | 2 cut(s) | 2477, 4280 |
| HspAI | GCGC | 4 cut(s) | 877, 1043, 1870, 2160 |
| Ksp22I | TGATCA | 4 cut(s) | 226, 1078, 2557, 3658 |
| KspAI | GTTAAC | 1 cut(s) | 769 |
| LguI | GCTCTTC | 1 cut(s) | 3297 |
| MabI | ACCWGGT | 1 cut(s) | 3561 |
| MaeI | CTAG | 8 cut(s) | 47, 936, 1017, 1343, 1479, 2061, 2211, 2400 |
| MaeII | ACGT | 2 cut(s) | 2477, 2945 |
| MfeI | CAATTG | 1 cut(s) | 2042 |
| MflI | RGATCY | 8 cut(s) | 27, 206, 1193, 1345, 1393, 3439, 3607, 3757 |
| MhlI | GDGCHC | 4 cut(s) | 371, 1453, 2410, 2779 |
| MlsI | TGGCCA | 3 cut(s) | 3510, 4078, 4469 |
| MluNI | TGGCCA | 3 cut(s) | 3510, 4078, 4469 |
| MlyI | GAGTC | 5 cut(s) | 241, 964, 2716, 3844, 4018 |
| MmeI | TCCRAC | 5 cut(s) | 196, 496, 1773, 4641, 4689 |
| Mox20I | TGGCCA | 3 cut(s) | 3510, 4078, 4469 |
| Mph1103I | ATGCAT | 5 cut(s) | 439, 2838, 2923, 4492, 4807 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1758 |
| MscI | TGGCCA | 3 cut(s) | 3510, 4078, 4469 |
| MslI | CAYNNNNRTG | 3 cut(s) | 201, 1740, 3459 |
| Msp20I | TGGCCA | 3 cut(s) | 3510, 4078, 4469 |
| MspA1I | CMGCKG | 1 cut(s) | 2420 |
| MspCI | CTTAAG | 1 cut(s) | 4526 |
| MspI | CCGG | 2 cut(s) | 1178, 1491 |
| MunI | CAATTG | 1 cut(s) | 2042 |
| Mva1269I | GAATGC | 5 cut(s) | 552, 1228, 1701, 3310, 3354 |
| NciI | CCSGG | 1 cut(s) | 1179 |
| NcoI | CCATGG | 1 cut(s) | 4208 |
| NdeI | CATATG | 3 cut(s) | 2100, 2311, 2347 |
| NmuCI | GTSAC | 6 cut(s) | 2119, 2524, 3461, 4199, 4453, 4831 |
| NsbI | TGCGCA | 1 cut(s) | 1044 |
| NsiI | ATGCAT | 5 cut(s) | 439, 2838, 2923, 4492, 4807 |
| NspI | RCATGY | 4 cut(s) | 1651, 2921, 3094, 4494 |
| NspV | TTCGAA | 4 cut(s) | 158, 2878, 3314, 3428 |
| PaeI | GCATGC | 2 cut(s) | 3094, 4494 |
| PaeR7I | CTCGAG | 1 cut(s) | 1829 |
| PagI | TCATGA | 1 cut(s) | 1750 |
| PciSI | GCTCTTC | 1 cut(s) | 3297 |
| PctI | GAATGC | 5 cut(s) | 552, 1228, 1701, 3310, 3354 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1758 |
| PflFI | GACNNNGTC | 1 cut(s) | 4815 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3104, 4159 |
| PinAI | ACCGGT | 1 cut(s) | 1490 |
| PleI | GAGTC | 5 cut(s) | 241, 963, 2715, 3843, 4017 |
| PpsI | GAGTC | 5 cut(s) | 241, 963, 2715, 3843, 4017 |
| PpuMI | RGGWCCY | 1 cut(s) | 2927 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3646 |
| PshBI | ATTAAT | 2 cut(s) | 753, 1950 |
| Psp1406I | AACGTT | 1 cut(s) | 2945 |
| Psp5II | RGGWCCY | 1 cut(s) | 2927 |
| PspFI | CCCAGC | 2 cut(s) | 728, 2781 |
| PspPI | GGNCC | 6 cut(s) | 541, 1319, 2396, 2927, 4033, 4400 |
| PspPPI | RGGWCCY | 1 cut(s) | 2927 |
| PspXI | VCTCGAGB | 1 cut(s) | 1829 |
| PstI | CTGCAG | 4 cut(s) | 712, 1251, 3979, 4508 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1333, 4433 |
| PsuI | RGATCY | 8 cut(s) | 27, 206, 1193, 1345, 1393, 3439, 3607, 3757 |
| PsyI | GACNNNGTC | 1 cut(s) | 4815 |
| PvuII | CAGCTG | 1 cut(s) | 2420 |
| RseI | CAYNNNNRTG | 3 cut(s) | 201, 1740, 3459 |
| SapI | GCTCTTC | 1 cut(s) | 3297 |
| Sau96I | GGNCC | 6 cut(s) | 541, 1319, 2396, 2927, 4033, 4400 |
| ScaI | AGTACT | 1 cut(s) | 4522 |
| SchI | GAGTC | 5 cut(s) | 241, 964, 2716, 3844, 4018 |
| SduI | GDGCHC | 4 cut(s) | 371, 1453, 2410, 2779 |
| SexAI | ACCWGGT | 1 cut(s) | 3561 |
| SfcI | CTRYAG | 7 cut(s) | 659, 708, 1247, 2376, 2544, 3975, 4504 |
| Sfr274I | CTCGAG | 1 cut(s) | 1829 |
| SfuI | TTCGAA | 4 cut(s) | 158, 2878, 3314, 3428 |
| SinI | GGWCC | 3 cut(s) | 2396, 2927, 4033 |
| SlaI | CTCGAG | 1 cut(s) | 1829 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 201, 1740, 3459 |
| SphI | GCATGC | 2 cut(s) | 3094, 4494 |
| SsiI | CCGC | 7 cut(s) | 77, 1889, 3122, 3779, 4128, 4337, 4404 |
| SspI | AATATT | 2 cut(s) | 271, 1948 |
| SspMI | CTAG | 8 cut(s) | 47, 936, 1017, 1343, 1479, 2061, 2211, 2400 |
| StyI | CCWWGG | 3 cut(s) | 1200, 2771, 4208 |
| TaiI | ACGT | 2 cut(s) | 2480, 2948 |
| TaqII | GACCGA | 2 cut(s) | 1844, 3605 |
| TatI | WGTACW | 5 cut(s) | 1027, 1085, 1962, 2565, 4520 |
| TauI | GCSGC | 1 cut(s) | 3124 |
| TseFI | GTSAC | 6 cut(s) | 2119, 2524, 3461, 4199, 4453, 4831 |
| Tsp45I | GTSAC | 6 cut(s) | 2119, 2524, 3461, 4199, 4453, 4831 |
| TspGWI | ACGGA | 6 cut(s) | 2316, 3513, 3640, 4468, 4637, 4711 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4815 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3104, 4159 |
| Vha464I | CTTAAG | 1 cut(s) | 4526 |
| VneI | GTGCAC | 1 cut(s) | 1449 |
| VpaK11BI | GGWCC | 3 cut(s) | 2396, 2927, 4033 |
| VspI | ATTAAT | 2 cut(s) | 753, 1950 |
| XapI | RAATTY | 7 cut(s) | 688, 1000, 2092, 3256, 3682, 3928, 4135 |
| XbaI | TCTAGA | 1 cut(s) | 1342 |
| XceI | RCATGY | 4 cut(s) | 1651, 2921, 3094, 4494 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2417, 2778 |
| XhoI | CTCGAG | 1 cut(s) | 1829 |
| XmiI | GTMKAC | 1 cut(s) | 1495 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1758 |
| XspI | CTAG | 8 cut(s) | 47, 936, 1017, 1343, 1479, 2061, 2211, 2400 |
| ZraI | GACGTC | 1 cut(s) | 2478 |
| ZrmI | AGTACT | 1 cut(s) | 4522 |
| Zsp2I | ATGCAT | 5 cut(s) | 439, 2838, 2923, 4492, 4807 |