Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1049400.v1.1 MD00G1071500.v1.1 MD03G1154400.v1.1 |
| prunus_persica | Prupe.6G143600_v2.0.a1 |
| pyrus_communis | pycom03g10820 pycom11g14670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 491 |
| AccII | CGCG | 1 cut(s) | 21 |
| AcsI | RAATTY | 1 cut(s) | 442 |
| AcuI | CTGAAG | 1 cut(s) | 203 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 20 |
| AgsI | TTSAA | 2 cut(s) | 238, 707 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 185, 217, 308, 340 |
| AleI | CACNNNNGTG | 1 cut(s) | 650 |
| AluBI | AGCT | 3 cut(s) | 94, 151, 407 |
| AluI | AGCT | 3 cut(s) | 94, 151, 407 |
| Alw26I | GTCTC | 1 cut(s) | 288 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 286 |
| Ama87I | CYCGRG | 1 cut(s) | 737 |
| AoxI | GGCC | 3 cut(s) | 22, 268, 626 |
| ApeKI | GCWGC | 2 cut(s) | 57, 91 |
| ApoI | RAATTY | 1 cut(s) | 442 |
| AsuC2I | CCSGG | 3 cut(s) | 367, 738, 739 |
| AsuHPI | GGTGA | 3 cut(s) | 491, 649, 742 |
| AsuII | TTCGAA | 2 cut(s) | 142, 446 |
| AvaI | CYCGRG | 1 cut(s) | 737 |
| BaeGI | GKGCMC | 1 cut(s) | 496 |
| BanI | GGYRCC | 1 cut(s) | 491 |
| BanII | GRGCYC | 1 cut(s) | 256 |
| BbvI | GCAGC | 2 cut(s) | 44, 103 |
| BccI | CCATC | 2 cut(s) | 601, 814 |
| BceAI | ACGGC | 1 cut(s) | 70 |
| BcnI | CCSGG | 3 cut(s) | 367, 738, 739 |
| BcoDI | GTCTC | 1 cut(s) | 288 |
| BfaI | CTAG | 2 cut(s) | 216, 933 |
| BfmI | CTRYAG | 1 cut(s) | 58 |
| BisI | GCNGC | 5 cut(s) | 22, 58, 92, 168, 312 |
| BlsI | GCNGC | 5 cut(s) | 23, 59, 93, 169, 313 |
| Bme1390I | CCNGG | 3 cut(s) | 367, 738, 739 |
| BmeT110I | CYCGRG | 1 cut(s) | 737 |
| BmiI | GGNNCC | 2 cut(s) | 493, 831 |
| BmrFI | CCNGG | 3 cut(s) | 367, 738, 739 |
| BmsI | GCATC | 3 cut(s) | 555, 723, 903 |
| Bpu14I | TTCGAA | 2 cut(s) | 142, 446 |
| BpuMI | CCSGG | 3 cut(s) | 367, 738, 739 |
| BsaJI | CCNNGG | 2 cut(s) | 265, 737 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 155, 185 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 20 |
| BseDI | CCNNGG | 2 cut(s) | 265, 737 |
| BseGI | GGATG | 5 cut(s) | 570, 612, 799, 825, 841 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BseMII | CTCAG | 2 cut(s) | 293, 888 |
| BseRI | GAGGAG | 2 cut(s) | 143, 163 |
| BseSI | GKGCMC | 1 cut(s) | 496 |
| BseXI | GCAGC | 2 cut(s) | 44, 103 |
| BsgI | GTGCAG | 1 cut(s) | 196 |
| Bsh1236I | CGCG | 1 cut(s) | 21 |
| Bsh1285I | CGRYCG | 1 cut(s) | 331 |
| BshFI | GGCC | 3 cut(s) | 24, 270, 628 |
| BshNI | GGYRCC | 1 cut(s) | 491 |
| BsiEI | CGRYCG | 1 cut(s) | 331 |
| BsiHKCI | CYCGRG | 1 cut(s) | 737 |
| BsiSI | CCGG | 4 cut(s) | 366, 629, 738, 833 |
| BslFI | GGGAC | 1 cut(s) | 798 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BsmAI | GTCTC | 1 cut(s) | 288 |
| BsmFI | GGGAC | 1 cut(s) | 798 |
| BsmI | GAATGC | 3 cut(s) | 309, 454, 519 |
| BsnI | GGCC | 3 cut(s) | 24, 270, 628 |
| BsoBI | CYCGRG | 1 cut(s) | 737 |
| Bsp119I | TTCGAA | 2 cut(s) | 142, 446 |
| Bsp1286I | GDGCHC | 2 cut(s) | 256, 496 |
| BspANI | GGCC | 3 cut(s) | 24, 270, 628 |
| BspCNI | CTCAG | 2 cut(s) | 292, 889 |
| BspFNI | CGCG | 1 cut(s) | 21 |
| BspLI | GGNNCC | 2 cut(s) | 493, 831 |
| BspMAI | CTGCAG | 1 cut(s) | 62 |
| BspT104I | TTCGAA | 2 cut(s) | 142, 446 |
| BspT107I | GGYRCC | 1 cut(s) | 491 |
| BssECI | CCNNGG | 2 cut(s) | 265, 737 |
| BssT1I | CCWWGG | 1 cut(s) | 265 |
| Bst4CI | ACNGT | 1 cut(s) | 652 |
| Bst6I | CTCTTC | 4 cut(s) | 206, 265, 278, 903 |
| BstBI | TTCGAA | 2 cut(s) | 142, 446 |
| BstC8I | GCNNGC | 2 cut(s) | 309, 345 |
| BstDEI | CTNAG | 2 cut(s) | 279, 897 |
| BstF5I | GGATG | 5 cut(s) | 570, 612, 799, 825, 841 |
| BstFNI | CGCG | 1 cut(s) | 21 |
| BstMAI | GTCTC | 1 cut(s) | 288 |
| BstMCI | CGRYCG | 1 cut(s) | 331 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 126, 551 |
| BstSCI | CCNGG | 3 cut(s) | 365, 736, 737 |
| BstSFI | CTRYAG | 1 cut(s) | 58 |
| BstSLI | GKGCMC | 1 cut(s) | 496 |
| BstUI | CGCG | 1 cut(s) | 21 |
| BstV1I | GCAGC | 2 cut(s) | 44, 103 |
| BsuRI | GGCC | 3 cut(s) | 24, 270, 628 |
| BtsCI | GGATG | 5 cut(s) | 570, 612, 799, 825, 841 |
| Cac8I | GCNNGC | 2 cut(s) | 309, 345 |
| CaiI | CAGNNNCTG | 1 cut(s) | 286 |
| Cfr9I | CCCGGG | 1 cut(s) | 737 |
| CviAII | CATG | 4 cut(s) | 98, 401, 569, 671 |
| DdeI | CTNAG | 2 cut(s) | 279, 897 |
| Eam1104I | CTCTTC | 4 cut(s) | 206, 265, 278, 903 |
| EarI | CTCTTC | 4 cut(s) | 206, 265, 278, 903 |
| Eco130I | CCWWGG | 1 cut(s) | 265 |
| Eco147I | AGGCCT | 1 cut(s) | 270 |
| Eco24I | GRGCYC | 1 cut(s) | 256 |
| Eco57I | CTGAAG | 1 cut(s) | 203 |
| Eco88I | CYCGRG | 1 cut(s) | 737 |
| EcoRI | GAATTC | 1 cut(s) | 442 |
| EcoT14I | CCWWGG | 1 cut(s) | 265 |
| EcoT22I | ATGCAT | 1 cut(s) | 570 |
| EcoT38I | GRGCYC | 1 cut(s) | 256 |
| ErhI | CCWWGG | 1 cut(s) | 265 |
| FaeI | CATG | 4 cut(s) | 101, 404, 572, 674 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 900, 932 |
| FaqI | GGGAC | 1 cut(s) | 798 |
| FatI | CATG | 4 cut(s) | 97, 400, 568, 670 |
| FauI | CCCGC | 3 cut(s) | 134, 481, 547 |
| Fnu4HI | GCNGC | 5 cut(s) | 22, 58, 92, 168, 312 |
| FokI | GGATG | 5 cut(s) | 577, 619, 806, 832, 848 |
| FriOI | GRGCYC | 1 cut(s) | 256 |
| Fsp4HI | GCNGC | 5 cut(s) | 22, 58, 92, 168, 312 |
| FspBI | CTAG | 2 cut(s) | 216, 933 |
| GluI | GCNGC | 5 cut(s) | 22, 58, 92, 168, 312 |
| HaeIII | GGCC | 3 cut(s) | 24, 270, 628 |
| HapII | CCGG | 4 cut(s) | 366, 629, 738, 833 |
| Hin1II | CATG | 4 cut(s) | 101, 404, 572, 674 |
| HincII | GTYRAC | 1 cut(s) | 657 |
| HindII | GTYRAC | 1 cut(s) | 657 |
| HinfI | GANTC | 1 cut(s) | 874 |
| HpaII | CCGG | 4 cut(s) | 366, 629, 738, 833 |
| HphI | GGTGA | 3 cut(s) | 491, 649, 742 |
| Hpy166II | GTNNAC | 1 cut(s) | 657 |
| Hpy188I | TCNGA | 3 cut(s) | 80, 251, 302 |
| Hpy8I | GTNNAC | 1 cut(s) | 657 |
| Hpy99I | CGWCG | 1 cut(s) | 56 |
| HpyAV | CCTTC | 7 cut(s) | 206, 217, 238, 334, 682, 877, 918 |
| HpyCH4III | ACNGT | 1 cut(s) | 652 |
| HpyCH4V | TGCA | 4 cut(s) | 60, 213, 568, 854 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 126, 551 |
| HpyF3I | CTNAG | 2 cut(s) | 279, 897 |
| Hsp92II | CATG | 4 cut(s) | 101, 404, 572, 674 |
| LmnI | GCTCC | 6 cut(s) | 99, 156, 164, 404, 745, 829 |
| LpnPI | CCDG | 7 cut(s) | 357, 379, 603, 642, 751, 769, 846 |
| Lsp1109I | GCAGC | 2 cut(s) | 44, 103 |
| LweI | GCATC | 3 cut(s) | 555, 723, 903 |
| MaeI | CTAG | 2 cut(s) | 216, 933 |
| MaeIII | GTNAC | 1 cut(s) | 637 |
| MboII | GAAGA | 4 cut(s) | 193, 252, 265, 920 |
| MhlI | GDGCHC | 2 cut(s) | 256, 496 |
| MluCI | AATT | 3 cut(s) | 442, 546, 806 |
| MmeI | TCCRAC | 2 cut(s) | 216, 723 |
| Mph1103I | ATGCAT | 1 cut(s) | 570 |
| MslI | CAYNNNNRTG | 1 cut(s) | 650 |
| MspI | CCGG | 4 cut(s) | 366, 629, 738, 833 |
| MspR9I | CCNGG | 3 cut(s) | 367, 738, 739 |
| Mva1269I | GAATGC | 3 cut(s) | 309, 454, 519 |
| MvnI | CGCG | 1 cut(s) | 21 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 126, 551 |
| NciI | CCSGG | 3 cut(s) | 367, 738, 739 |
| NlaIII | CATG | 4 cut(s) | 101, 404, 572, 674 |
| NlaIV | GGNNCC | 2 cut(s) | 493, 831 |
| NmeAIII | GCCGAG | 2 cut(s) | 96, 366 |
| NmuCI | GTSAC | 1 cut(s) | 637 |
| NsiI | ATGCAT | 1 cut(s) | 570 |
| NspV | TTCGAA | 2 cut(s) | 142, 446 |
| OliI | CACNNNNGTG | 1 cut(s) | 650 |
| PceI | AGGCCT | 1 cut(s) | 270 |
| PctI | GAATGC | 3 cut(s) | 309, 454, 519 |
| PfeI | GAWTC | 1 cut(s) | 874 |
| PkrI | GCNGC | 5 cut(s) | 23, 59, 93, 169, 313 |
| PspN4I | GGNNCC | 2 cut(s) | 493, 831 |
| PstI | CTGCAG | 1 cut(s) | 62 |
| PstNI | CAGNNNCTG | 1 cut(s) | 286 |
| RseI | CAYNNNNRTG | 1 cut(s) | 650 |
| SatI | GCNGC | 5 cut(s) | 22, 58, 92, 168, 312 |
| ScrFI | CCNGG | 3 cut(s) | 367, 738, 739 |
| SduI | GDGCHC | 2 cut(s) | 256, 496 |
| SfaNI | GCATC | 3 cut(s) | 555, 723, 903 |
| SfcI | CTRYAG | 1 cut(s) | 58 |
| SfuI | TTCGAA | 2 cut(s) | 142, 446 |
| SmaI | CCCGGG | 1 cut(s) | 739 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 650 |
| Sse9I | AATT | 3 cut(s) | 442, 546, 806 |
| SseBI | AGGCCT | 1 cut(s) | 270 |
| SspMI | CTAG | 2 cut(s) | 216, 933 |
| StuI | AGGCCT | 1 cut(s) | 270 |
| StyD4I | CCNGG | 3 cut(s) | 365, 736, 737 |
| StyI | CCWWGG | 1 cut(s) | 265 |
| TaaI | ACNGT | 1 cut(s) | 652 |
| TaqI | TCGA | 4 cut(s) | 51, 142, 327, 446 |
| TasI | AATT | 3 cut(s) | 442, 546, 806 |
| TauI | GCSGC | 3 cut(s) | 24, 170, 314 |
| TfiI | GAWTC | 1 cut(s) | 874 |
| TseFI | GTSAC | 1 cut(s) | 637 |
| TseI | GCWGC | 2 cut(s) | 57, 91 |
| Tsp45I | GTSAC | 1 cut(s) | 637 |
| TspDTI | ATGAA | 5 cut(s) | 127, 220, 389, 728, 810 |
| TspGWI | ACGGA | 2 cut(s) | 525, 698 |
| TspMI | CCCGGG | 1 cut(s) | 737 |
| XapI | RAATTY | 1 cut(s) | 442 |
| XmaI | CCCGGG | 1 cut(s) | 737 |
| XspI | CTAG | 2 cut(s) | 216, 933 |
| Zsp2I | ATGCAT | 1 cut(s) | 570 |