Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0015833

Physical Location & Seq

Genomic Coordinates Reverse (-)

23354848 .. 23357260

Gene Structure 2413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGATTCTAATTGTGGATATTTACAACTATGCCCTTCCTTACACTGTTGTGTTTACCTTTTCATCCCCAAACATCTCTTTTTCATCACACCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAAACTACACACAAACGCCATGCCTGAAGCACCAAAGAAATTTCTGAATCCCACGGAGGACTATAACCTCCAAGACAAGAACAACAAGATCCTTCACTTCATTGAAGAAGTCACAAAAAACCCCGACGAGGTTCAAAAACGAGTCCTCGCTGAAATCCTCACCCGCAATGCTCACGTCGAGTACTTGCAGCGTCACGGCCTCAACGGTCACACTGACCGTGATACTTTCAAAAAAATGATGCCCGTTATCAAATACGAAGATATCCAGTCCGATATCAACCGTATCGCCAATGGTGACACCTCCCAAATCCTCTGTTCCAAGCCCATTTCTGAGTTTTTGACCAGTTCTGGGACATCTGGAGGGGAAAGAAAACTGATGCCAACAATTGAAGAGGAGCTTGATAGGAGGTCACTGCTTTACAGCCTGCTGATGCCTGTGATGAGCCAGTATGTCCCCGGACTCGACAAAGGCAAAGGAATGTACTTTTTGTTCATAAAATCCGAGGCCAAAACTCCCGGCGGACTAGTTGCTAGGCCAGTCCTTACCAGCTACTACAAAAGCTCACATTTCAAACAAAGACCCTATGACCCTTACACTAACTACACCAGCCCCAATGAGACCATCCTCTGCCCGGACTCGTACCAAAGCATGTACTCCCAACTCCTCTGCGGCCTCTGCCAAAACAAGGAAGTTCTCCGAGTCGGTGCAGTTTTCGCCTCTGGCTTCATCCGGGCCATCAGGTTTCTCGAGAAGCACTGGACTCTTTTGTGCAAGGACATAGCCTCTGGGACTCTAAACCCCCAGATTACAGACCCATCGGTCCGCGAGGCGGTGATGAAGATCCTCAAGCCTGACCCGAAGCTTGCAAGCTTCATTGAGGCTGAGTGTGGGAAGGCCTCCTGGCATGGGATTATTACCAGGCTTTGGCCAAACACAAAGTATGTGGATGTGATTGTGACCGGGACTATGTCGCAGTACATTCCCACGTTGGAATATTACAGCAACGGACTGCCTCAGGTTTGCACTATGTATGCCTCTTCGGAGTGCTACTTTGGTGTAAATCTTAACCCTCTGTGCAAACCCAGTGAAGTGTCCTACACTCTTATTCCCACCATGGGATACTTTGAGCTCCTCCCAGTCCAGAGGAACAATGGGATTAATTCTAATCCCCTATCTGTCCCCAAATCCCTCAATGAGAAGGAGCAGCAACAACTGGTTGATCTTGCAGACGCGAAGCTTGGACAAGAATATGAGCTTGTTGTCACAACATATGCTGGACTGTACCGCTATAGAGTGGGGGATGTGCTGAGAGTGGCCTCCTTCAAGAACAAGGCACCACAGTTCAACTTCATATGTAGGAAAAATGTTGTCCTGAGCATTGACTCGGACAAGACGGATGAGGTGGAGCTCCAAAACGCAGTGAAAAATGCCGTGACCCATTTAGTACCGTTCGATGCCACTGTGACGGAATACACTAGTTTTGCGGACACAACAACAATCCCGGGACACTATGTGCTCTTTTGGGAACTTAGCCTCAATGGGACAACGCCAATCCCACCCTCAGTCTTCGAGGACTGTTGCTTCACCGCCGAAGAGTCCCTGAATAGCGTCTACCGGCAAGGCCGGGCCTCCGACAAGTCCATCGGACCACTCGAGATCAAGATTGTGGAGGCAGGGACGTTTGACAAGCTCATGGACTATGCCATTAGCTTGGGAGCTTCCATTAACCAATACAAGACACCTAGGTGTGTGAAATTTGCACCCATTGTGGAGCTCTTGAGCACAAGGGTGGTCTCAAGCTACTTTAGTCCGAAGTGCCCAAAGTGGGTCCCAGGGCACAAGCAATGGTGCAGCATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006790 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009403 GO:0009404 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009653 GO:0009700 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009826 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010120 GO:0010252 GO:0010279 GO:0016043 GO:0016049 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019222 GO:0019438 GO:0019748 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032870 GO:0032989 GO:0034641 GO:0040007 GO:0042221 GO:0042430 GO:0042435 GO:0042592 GO:0042762 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043455 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046217 GO:0046483 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051176 GO:0051716 GO:0052314 GO:0052315 GO:0052317 GO:0052318 GO:0052319 GO:0052320 GO:0052322 GO:0060560 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:1900376 GO:1900378 GO:1901182 GO:1901183 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

666

Amino Acids

74.86

Weight (kDa)

6.89

Isoelectric Point (pI)

39.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	76 - 383	1.2e-125	GH3 family N-terminal domain
GH3_M	PF23571	411 - 498	2.2e-27	GH3 family central domain
GH3_C	PF23572	514 - 631	1e-37	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27260 AT5G54510
fragaria_vesca	FvH4_3g21460
malus_domestica	MD03G1215800.v1.1 MD11G1230400.v1.1
prunus_persica	Prupe.4G197000_v2.0.a1
pyrus_communis	pycom03g16410 pycom11g20410
rosa_chinensis	RchiOBHm_Chr5g0036891
rosa_laevigata	RLG00000033732
rosa_multiflora	Rmu_sc0007663.1_g000004
rosa_roxburghii	Rroxscaffold_1G00044060
rosa_rugosa	Rorug05G0158600
rosa_samantha	Rh5CG285100
rosa_wichuraiana	Rw5G023080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	953
AccB1I	GGYRCC	1 cut(s)	1468
AccB7I	CCANNNNNTGG	1 cut(s)	1059
AccI	GTMKAC	1 cut(s)	1746
AccII	CGCG	2 cut(s)	960, 1367
AciI	CCGC	8 cut(s)	298, 654, 804, 958, 965, 1420, 1619, 1722
AclWI	GGATC	2 cut(s)	217, 970
AcoI	YGGCCR	1 cut(s)	1061
AcsI	RAATTY	2 cut(s)	173, 1889
AcuI	CTGAAG	1 cut(s)	180
AdeI	CACNNNGTG	1 cut(s)	1648
AfaI	GTAC	7 cut(s)	317, 617, 776, 788, 1112, 1418, 1581
AfiI	CCNNNNNNNGG	9 cut(s)	262, 483, 766, 820, 964, 1041, 1059, 1250, 1960
AgsI	TTSAA	7 cut(s)	239, 269, 364, 524, 706, 1459, 1480
AhlI	ACTAGT	2 cut(s)	658, 1610
AjiI	CACGTC	1 cut(s)	310
AjnI	CCWGG	3 cut(s)	1034, 1052, 1966
AleI	CACNNNNGTG	3 cut(s)	47, 1879, 1922
Alw21I	GWGCWC	5 cut(s)	1266, 1545, 1653, 1911, 1919
Alw26I	GTCTC	2 cut(s)	746, 1933
AlwI	GGATC	2 cut(s)	217, 970
Ama87I	CYCGRG	3 cut(s)	881, 1636, 1787
ApeKI	GCWGC	3 cut(s)	322, 1339, 1986
ApoI	RAATTY	2 cut(s)	173, 1889
AseI	ATTAAT	1 cut(s)	1293
AspA2I	CCTAGG	1 cut(s)	1877
AspS9I	GGNCC	5 cut(s)	867, 955, 1761, 1781, 1963
AsuC2I	CCSGG	8 cut(s)	591, 651, 767, 866, 1096, 1637, 1638, 1760
AsuHPI	GGTGA	4 cut(s)	286, 440, 979, 1711
AvaI	CYCGRG	3 cut(s)	881, 1636, 1787
AvaII	GGWCC	3 cut(s)	955, 1781, 1963
AvrII	CCTAGG	1 cut(s)	1877
AxyI	CCTNAGG	1 cut(s)	1149
BaeGI	GKGCMC	2 cut(s)	1955, 1974
BalI	TGGCCA	1 cut(s)	1063
BanI	GGYRCC	1 cut(s)	1468
BanII	GRGCYC	3 cut(s)	1266, 1545, 1911
BbsI	GAAGAC	1 cut(s)	1693
Bbv12I	GWGCWC	5 cut(s)	1266, 1545, 1653, 1911, 1919
BbvI	GCAGC	2 cut(s)	334, 1351
BccI	CCATC	5 cut(s)	99, 764, 878, 958, 1784
BceAI	ACGGC	2 cut(s)	346, 1550
BciT130I	CCWGG	3 cut(s)	1036, 1054, 1968
BciVI	GTATCC	1 cut(s)	1247
BcnI	CCSGG	8 cut(s)	591, 651, 767, 866, 1096, 1637, 1638, 1760
BcoDI	GTCTC	2 cut(s)	746, 1933
BcuI	ACTAGT	2 cut(s)	658, 1610
BfaI	CTAG	4 cut(s)	659, 666, 1611, 1878
BfmI	CTRYAG	1 cut(s)	1423
BfuI	GTATCC	1 cut(s)	1247
BisI	GCNGC	4 cut(s)	323, 805, 1340, 1987
BlnI	CCTAGG	1 cut(s)	1877
BlsI	GCNGC	4 cut(s)	324, 806, 1341, 1988
BmcAI	AGTACT	1 cut(s)	317
Bme18I	GGWCC	3 cut(s)	955, 1781, 1963
BmeT110I	CYCGRG	3 cut(s)	881, 1636, 1787
BmgBI	CACGTC	1 cut(s)	310
BmgT120I	GGNCC	5 cut(s)	867, 955, 1761, 1781, 1963
BmiI	GGNNCC	3 cut(s)	1470, 1964, 1965
BmrI	ACTGGG	2 cut(s)	1212, 1265
BmsI	GCATC	4 cut(s)	363, 501, 555, 1579
BmuI	ACTGGG	2 cut(s)	1212, 1265
BpiI	GAAGAC	1 cut(s)	1693
BpmI	CTGGAG	1 cut(s)	513
Bpu10I	CCTNAGC	1 cut(s)	1508
BpuEI	CTTGAG	3 cut(s)	965, 1915, 1933
BpuMI	CCSGG	8 cut(s)	591, 651, 767, 866, 1096, 1637, 1638, 1760
BsaBI	GATNNNNATC	1 cut(s)	974
BsaI	GGTCTC	2 cut(s)	746, 1933
BsaJI	CCNNGG	8 cut(s)	186, 589, 636, 1248, 1636, 1877, 1966, 1967
Bsc4I	CCNNNNNNNGG	9 cut(s)	262, 483, 766, 820, 964, 1041, 1059, 1250, 1960
Bse118I	RCCGGY	1 cut(s)	1749
Bse1I	ACTGG	8 cut(s)	400, 477, 580, 671, 896, 1218, 1271, 1353
Bse21I	CCTNAGG	1 cut(s)	1149
Bse3DI	GCAATG	2 cut(s)	307, 1985
Bse8I	GATNNNNATC	1 cut(s)	974
BseBI	CCWGG	3 cut(s)	1036, 1054, 1968
BseDI	CCNNGG	8 cut(s)	186, 589, 636, 1248, 1636, 1877, 1966, 1967
BseGI	GGATG	6 cut(s)	62, 756, 861, 1087, 1441, 1537
BseJI	GATNNNNATC	1 cut(s)	974
BseLI	CCNNNNNNNGG	9 cut(s)	262, 483, 766, 820, 964, 1041, 1059, 1250, 1960
BseMI	GCAATG	2 cut(s)	307, 1985
BseMII	CTCAG	6 cut(s)	456, 1008, 1163, 1433, 1499, 1710
BseNI	ACTGG	8 cut(s)	400, 477, 580, 671, 896, 1218, 1271, 1353
BseRI	GAGGAG	3 cut(s)	542, 788, 1256
BseSI	GKGCMC	2 cut(s)	1955, 1974
BseXI	GCAGC	2 cut(s)	334, 1351
BsgI	GTGCAG	1 cut(s)	861
Bsh1236I	CGCG	2 cut(s)	960, 1367
BshNI	GGYRCC	1 cut(s)	1468
BsiHKAI	GWGCWC	5 cut(s)	1266, 1545, 1653, 1911, 1919
BsiHKCI	CYCGRG	3 cut(s)	881, 1636, 1787
BsiSI	CCGG	8 cut(s)	591, 651, 767, 865, 1095, 1637, 1750, 1759
BslI	CCNNNNNNNGG	9 cut(s)	262, 483, 766, 820, 964, 1041, 1059, 1250, 1960
BsmAI	GTCTC	2 cut(s)	746, 1933
Bso31I	GGTCTC	2 cut(s)	746, 1933
BsoBI	CYCGRG	3 cut(s)	881, 1636, 1787
Bsp1286I	GDGCHC	7 cut(s)	1266, 1545, 1653, 1911, 1919, 1955, 1974
Bsp143I	GATC	4 cut(s)	222, 975, 1354, 1791
Bsp19I	CCATGG	1 cut(s)	1248
BspACI	CCGC	8 cut(s)	298, 654, 804, 958, 965, 1420, 1619, 1722
BspCNI	CTCAG	6 cut(s)	457, 1009, 1162, 1434, 1500, 1709
BspFNI	CGCG	2 cut(s)	960, 1367
BspLI	GGNNCC	3 cut(s)	1470, 1964, 1965
BspPI	GGATC	2 cut(s)	217, 970
BspT107I	GGYRCC	1 cut(s)	1468
BspTNI	GGTCTC	2 cut(s)	746, 1933
BsrDI	GCAATG	2 cut(s)	307, 1985
BsrFI	RCCGGY	1 cut(s)	1749
BsrI	ACTGG	8 cut(s)	400, 477, 580, 671, 896, 1218, 1271, 1353
BssAI	RCCGGY	1 cut(s)	1749
BssECI	CCNNGG	8 cut(s)	186, 589, 636, 1248, 1636, 1877, 1966, 1967
BssMI	GATC	4 cut(s)	222, 975, 1354, 1791
BssT1I	CCWWGG	2 cut(s)	1248, 1877
Bst2UI	CCWGG	3 cut(s)	1036, 1054, 1968
Bst4CI	ACNGT	9 cut(s)	46, 341, 353, 416, 1416, 1476, 1584, 1597, 1712
Bst6I	CTCTTC	3 cut(s)	519, 1177, 1722
BstC8I	GCNNGC	3 cut(s)	560, 999, 1003
BstDEI	CTNAG	7 cut(s)	465, 1017, 1149, 1442, 1508, 1664, 1696
BstDSI	CCRYGG	2 cut(s)	186, 1248
BstF5I	GGATG	6 cut(s)	62, 756, 861, 1087, 1441, 1537
BstFNI	CGCG	2 cut(s)	960, 1367
BstKTI	GATC	4 cut(s)	225, 978, 1357, 1794
BstMAI	GTCTC	2 cut(s)	746, 1933
BstMBI	GATC	4 cut(s)	222, 975, 1354, 1791
BstMWI	GCNNNNNNNGC	2 cut(s)	810, 848
BstNI	CCWGG	3 cut(s)	1036, 1054, 1968
BstNSI	RCATGY	1 cut(s)	787
BstSFI	CTRYAG	1 cut(s)	1423
BstSLI	GKGCMC	2 cut(s)	1955, 1974
BstUI	CGCG	2 cut(s)	960, 1367
BstV1I	GCAGC	2 cut(s)	334, 1351
BstV2I	GAAGAC	1 cut(s)	1693
BstX2I	RGATCY	2 cut(s)	222, 975
BstXI	CCANNNNNNTGG	1 cut(s)	1846
BstYI	RGATCY	2 cut(s)	222, 975
Bsu36I	CCTNAGG	1 cut(s)	1149
BsuI	GTATCC	1 cut(s)	1247
BtgI	CCRYGG	2 cut(s)	186, 1248
BtrI	CACGTC	1 cut(s)	310
BtsCI	GGATG	6 cut(s)	62, 756, 861, 1087, 1441, 1537
BtsI	GCAGTG	2 cut(s)	545, 1560
BtsIMutI	CAGTG	7 cut(s)	42, 345, 545, 889, 1225, 1560, 1593
Cac8I	GCNNGC	3 cut(s)	560, 999, 1003
Cfr10I	RCCGGY	1 cut(s)	1749
Cfr13I	GGNCC	5 cut(s)	867, 955, 1761, 1781, 1963
Cfr9I	CCCGGG	1 cut(s)	1636
CpoI	CGGWCCG	1 cut(s)	955
CseI	GACGC	3 cut(s)	314, 1373, 1732
Csp6I	GTAC	7 cut(s)	316, 616, 775, 787, 1111, 1417, 1580
CspCI	CAANNNNNGTGG	2 cut(s)	1059, 1094
CspI	CGGWCCG	1 cut(s)	955
CviAII	CATG	5 cut(s)	154, 784, 1040, 1249, 1828
CviQI	GTAC	7 cut(s)	316, 616, 775, 787, 1111, 1417, 1580
DdeI	CTNAG	7 cut(s)	465, 1017, 1149, 1442, 1508, 1664, 1696
DpnI	GATC	4 cut(s)	224, 977, 1356, 1793
DpnII	GATC	4 cut(s)	222, 975, 1354, 1791
DraIII	CACNNNGTG	1 cut(s)	1648
DrdI	GACNNNNNNGTC	1 cut(s)	953
DseDI	GACNNNNNNGTC	1 cut(s)	953
EaeI	YGGCCR	1 cut(s)	1061
Eam1104I	CTCTTC	3 cut(s)	519, 1177, 1722
EarI	CTCTTC	3 cut(s)	519, 1177, 1722
EciI	GGCGGA	1 cut(s)	669
Ecl136II	GAGCTC	3 cut(s)	1264, 1543, 1909
Eco130I	CCWWGG	2 cut(s)	1248, 1877
Eco147I	AGGCCT	1 cut(s)	1031
Eco24I	GRGCYC	3 cut(s)	1266, 1545, 1911
Eco31I	GGTCTC	2 cut(s)	746, 1933
Eco32I	GATATC	2 cut(s)	397, 409
Eco47I	GGWCC	3 cut(s)	955, 1781, 1963
Eco53kI	GAGCTC	3 cut(s)	1264, 1543, 1909
Eco57I	CTGAAG	1 cut(s)	180
Eco81I	CCTNAGG	1 cut(s)	1149
Eco88I	CYCGRG	3 cut(s)	881, 1636, 1787
EcoICRI	GAGCTC	3 cut(s)	1264, 1543, 1909
EcoO109I	RGGNCCY	1 cut(s)	1963
EcoRII	CCWGG	3 cut(s)	1034, 1052, 1966
EcoRV	GATATC	2 cut(s)	397, 409
EcoT14I	CCWWGG	2 cut(s)	1248, 1877
EcoT38I	GRGCYC	3 cut(s)	1266, 1545, 1911
ErhI	CCWWGG	2 cut(s)	1248, 1877
FaeI	CATG	5 cut(s)	157, 787, 1043, 1252, 1831
FalI	AAGNNNNNCTT	2 cut(s)	516, 548
FatI	CATG	5 cut(s)	153, 783, 1039, 1248, 1827
FauI	CCCGC	1 cut(s)	305
FauNDI	CATATG	2 cut(s)	1405, 1487
FblI	GTMKAC	1 cut(s)	1746
Fnu4HI	GCNGC	4 cut(s)	323, 805, 1340, 1987
FokI	GGATG	6 cut(s)	49, 743, 848, 1094, 1448, 1544
FriOI	GRGCYC	3 cut(s)	1266, 1545, 1911
Fsp4HI	GCNGC	4 cut(s)	323, 805, 1340, 1987
FspBI	CTAG	4 cut(s)	659, 666, 1611, 1878
GluI	GCNGC	4 cut(s)	323, 805, 1340, 1987
GsuI	CTGGAG	1 cut(s)	513
HapII	CCGG	8 cut(s)	591, 651, 767, 865, 1095, 1637, 1750, 1759
HgaI	GACGC	3 cut(s)	314, 1373, 1732
Hin1II	CATG	5 cut(s)	157, 787, 1043, 1252, 1831
HindIII	AAGCTT	3 cut(s)	995, 1003, 1370
HpaII	CCGG	8 cut(s)	591, 651, 767, 865, 1095, 1637, 1750, 1759
HphI	GGTGA	4 cut(s)	286, 440, 979, 1711
Hpy166II	GTNNAC	2 cut(s)	54, 1747
Hpy188III	TCNNGA	9 cut(s)	492, 881, 883, 1276, 1459, 1507, 1789, 1795, 1912
Hpy8I	GTNNAC	2 cut(s)	54, 1747
Hpy99I	CGWCG	2 cut(s)	263, 314
HpyAV	CCTTC	5 cut(s)	44, 236, 1021, 1327, 1465
HpyCH4III	ACNGT	9 cut(s)	46, 341, 353, 416, 1416, 1476, 1584, 1597, 1712
HpyCH4IV	ACGT	3 cut(s)	309, 1121, 1814
HpyCH4V	TGCA	9 cut(s)	322, 842, 906, 1001, 1158, 1212, 1361, 1895, 1986
HpyF10VI	GCNNNNNNNGC	2 cut(s)	810, 848
HpyF3I	CTNAG	7 cut(s)	465, 1017, 1149, 1442, 1508, 1664, 1696
HpySE526I	ACGT	3 cut(s)	309, 1121, 1814
Hsp92II	CATG	5 cut(s)	157, 787, 1043, 1252, 1831
KflI	GGGWCCC	1 cut(s)	1963
Kzo9I	GATC	4 cut(s)	222, 975, 1354, 1791
LmnI	GCTCC	7 cut(s)	529, 1269, 1336, 1540, 1548, 1850, 1906
Lsp1109I	GCAGC	2 cut(s)	334, 1351
LweI	GCATC	4 cut(s)	363, 501, 555, 1579
MaeI	CTAG	4 cut(s)	659, 666, 1611, 1878
MaeII	ACGT	3 cut(s)	309, 1121, 1814
MaeIII	GTNAC	9 cut(s)	244, 326, 341, 428, 543, 1090, 1396, 1567, 1597
MalI	GATC	4 cut(s)	224, 977, 1356, 1793
MboI	GATC	4 cut(s)	222, 975, 1354, 1791
MboII	GAAGA	7 cut(s)	251, 404, 536, 985, 1164, 1693, 1739
MfeI	CAATTG	1 cut(s)	519
MflI	RGATCY	2 cut(s)	222, 975
MhlI	GDGCHC	7 cut(s)	1266, 1545, 1653, 1911, 1919, 1955, 1974
MlsI	TGGCCA	1 cut(s)	1063
MluCI	AATT	5 cut(s)	9, 173, 519, 1294, 1889
MluNI	TGGCCA	1 cut(s)	1063
MlyI	GAGTC	8 cut(s)	285, 588, 764, 843, 889, 919, 1511, 1739
MmeI	TCCRAC	2 cut(s)	1104, 1791
Mox20I	TGGCCA	1 cut(s)	1063
MscI	TGGCCA	1 cut(s)	1063
MseI	TTAA	3 cut(s)	1200, 1293, 1860
MslI	CAYNNNNRTG	3 cut(s)	47, 1879, 1922
Msp20I	TGGCCA	1 cut(s)	1063
MspI	CCGG	8 cut(s)	591, 651, 767, 865, 1095, 1637, 1750, 1759
MunI	CAATTG	1 cut(s)	519
MvaI	CCWGG	3 cut(s)	1036, 1054, 1968
MvnI	CGCG	2 cut(s)	960, 1367
MwoI	GCNNNNNNNGC	2 cut(s)	810, 848
NciI	CCSGG	8 cut(s)	591, 651, 767, 866, 1096, 1637, 1638, 1760
NcoI	CCATGG	1 cut(s)	1248
NdeI	CATATG	2 cut(s)	1405, 1487
NdeII	GATC	4 cut(s)	222, 975, 1354, 1791
NlaIII	CATG	5 cut(s)	157, 787, 1043, 1252, 1831
NlaIV	GGNNCC	3 cut(s)	1470, 1964, 1965
NmuCI	GTSAC	9 cut(s)	244, 326, 341, 428, 543, 1090, 1396, 1567, 1597
NspI	RCATGY	1 cut(s)	787
OliI	CACNNNNGTG	3 cut(s)	47, 1879, 1922
PaeR7I	CTCGAG	2 cut(s)	881, 1787
PasI	CCCWGGG	1 cut(s)	1967
PceI	AGGCCT	1 cut(s)	1031
PcsI	WCGNNNNNNNCGW	1 cut(s)	1785
PfeI	GAWTC	2 cut(s)	4, 181
PflFI	GACNNNGTC	1 cut(s)	1102
PflMI	CCANNNNNTGG	1 cut(s)	1059
PkrI	GCNGC	4 cut(s)	324, 806, 1341, 1988
PleI	GAGTC	8 cut(s)	284, 588, 764, 842, 889, 919, 1511, 1738
PpsI	GAGTC	8 cut(s)	284, 588, 764, 842, 889, 919, 1511, 1738
PpuMI	RGGWCCY	1 cut(s)	1963
PshBI	ATTAAT	1 cut(s)	1293
Psp124BI	GAGCTC	3 cut(s)	1266, 1545, 1911
Psp5II	RGGWCCY	1 cut(s)	1963
Psp6I	CCWGG	3 cut(s)	1034, 1052, 1966
PspGI	CCWGG	3 cut(s)	1034, 1052, 1966
PspN4I	GGNNCC	3 cut(s)	1470, 1964, 1965
PspPI	GGNCC	5 cut(s)	867, 955, 1761, 1781, 1963
PspPPI	RGGWCCY	1 cut(s)	1963
PsrI	GAACNNNNNNTAC	2 cut(s)	608, 640
PsuI	RGATCY	2 cut(s)	222, 975
PsyI	GACNNNGTC	1 cut(s)	1102
RsaI	GTAC	7 cut(s)	317, 617, 776, 788, 1112, 1418, 1581
RsaNI	GTAC	7 cut(s)	316, 616, 775, 787, 1111, 1417, 1580
RseI	CAYNNNNRTG	3 cut(s)	47, 1879, 1922
Rsr2I	CGGWCCG	1 cut(s)	955
RsrII	CGGWCCG	1 cut(s)	955
SacI	GAGCTC	3 cut(s)	1266, 1545, 1911
SaqAI	TTAA	3 cut(s)	1200, 1293, 1860
SatI	GCNGC	4 cut(s)	323, 805, 1340, 1987
Sau3AI	GATC	4 cut(s)	222, 975, 1354, 1791
Sau96I	GGNCC	5 cut(s)	867, 955, 1761, 1781, 1963
ScaI	AGTACT	1 cut(s)	317
SchI	GAGTC	8 cut(s)	285, 588, 764, 843, 889, 919, 1511, 1739
SduI	GDGCHC	7 cut(s)	1266, 1545, 1653, 1911, 1919, 1955, 1974
SfaNI	GCATC	4 cut(s)	363, 501, 555, 1579
SfcI	CTRYAG	1 cut(s)	1423
Sfr274I	CTCGAG	2 cut(s)	881, 1787
SinI	GGWCC	3 cut(s)	955, 1781, 1963
SlaI	CTCGAG	2 cut(s)	881, 1787
SmaI	CCCGGG	1 cut(s)	1638
SmiMI	CAYNNNNRTG	3 cut(s)	47, 1879, 1922
SmlI	CTYRAG	5 cut(s)	881, 980, 1787, 1912, 1930
SmoI	CTYRAG	5 cut(s)	881, 980, 1787, 1912, 1930
SpeI	ACTAGT	2 cut(s)	658, 1610
Sse9I	AATT	5 cut(s)	9, 173, 519, 1294, 1889
SseBI	AGGCCT	1 cut(s)	1031
SsiI	CCGC	8 cut(s)	298, 654, 804, 958, 965, 1420, 1619, 1722
SspI	AATATT	1 cut(s)	1130
SspMI	CTAG	4 cut(s)	659, 666, 1611, 1878
SstI	GAGCTC	3 cut(s)	1266, 1545, 1911
StuI	AGGCCT	1 cut(s)	1031
StyI	CCWWGG	2 cut(s)	1248, 1877
TaaI	ACNGT	9 cut(s)	46, 341, 353, 416, 1416, 1476, 1584, 1597, 1712
TaiI	ACGT	3 cut(s)	312, 1124, 1817
TaqI	TCGA	6 cut(s)	312, 597, 882, 1587, 1704, 1788
TaqII	GACCGA	1 cut(s)	943
TasI	AATT	5 cut(s)	9, 173, 519, 1294, 1889
TatI	WGTACW	4 cut(s)	315, 615, 786, 1110
TauI	GCSGC	1 cut(s)	807
TfiI	GAWTC	2 cut(s)	4, 181
Tru1I	TTAA	3 cut(s)	1200, 1293, 1860
Tru9I	TTAA	3 cut(s)	1200, 1293, 1860
TscAI	CASTG	7 cut(s)	49, 352, 552, 896, 1225, 1560, 1600
TseFI	GTSAC	9 cut(s)	244, 326, 341, 428, 543, 1090, 1396, 1567, 1597
TseI	GCWGC	3 cut(s)	322, 1339, 1986
Tsp45I	GTSAC	9 cut(s)	244, 326, 341, 428, 543, 1090, 1396, 1567, 1597
TspDTI	ATGAA	8 cut(s)	51, 72, 223, 616, 850, 986, 997, 1474
TspGWI	ACGGA	4 cut(s)	203, 1155, 1544, 1616
TspMI	CCCGGG	1 cut(s)	1636
TspRI	CASTG	7 cut(s)	49, 352, 552, 896, 1225, 1560, 1600
Tth111I	GACNNNGTC	1 cut(s)	1102
Van91I	CCANNNNNTGG	1 cut(s)	1059
VpaK11BI	GGWCC	3 cut(s)	955, 1781, 1963
VspI	ATTAAT	1 cut(s)	1293
XapI	RAATTY	2 cut(s)	173, 1889
XceI	RCATGY	1 cut(s)	787
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1283
XhoI	CTCGAG	2 cut(s)	881, 1787
XmaI	CCCGGG	1 cut(s)	1636
XmaJI	CCTAGG	1 cut(s)	1877
XmiI	GTMKAC	1 cut(s)	1746
XspI	CTAG	4 cut(s)	659, 666, 1611, 1878
ZrmI	AGTACT	1 cut(s)	317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.