pycom11g26660

glycosyltransferase 2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
29152494 .. 29153831
1338 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g26660.1

Sequence Viewer

Length: 1338 bp
ATGCTTGGGAGCTCAACGATCGATCGGCGGATCCAGAGAGCTCTCCGGCACTCCAAGGTCACGATCCTCTGCCTCGTCCTCACGGTGGTCGTCCTTCGGGGCACGATCGGAGCCGGCAAGTTCGGAACCCCGGAACAGGACTTCCTCGAGATTCGCGACCACTTCTACTCCCGCAAGCGGGCGGAGGCCCACCGCGTCCTGGAGGAGGTCCACGCGACGCCGTCGGACCCCAACAACTACAACGCCTTCGATATTAAGAAGCTCCTTGTCGATGAAGGTGAGGAGGAACAGCTCGACCCGAATAAGCCATACACTCTCGGACCCAAGATTTCGAATTGGGACGAGTTGAGGTCGAAATGGCTGAGGGAAAACCCTAATTTCCCAAATTTCATCGGGCCTGGTAAGCCCCGGGTGCTTCTGGTGACTGGGTCTTCGCCGAAACCCTGCGAAAATCCGGTAGGTGATCATTACTTGTTGAAGTCGATTAAGAACAAAATTGATTATTGTAGATTACATGGGATTGAGGTTTTTTACAATATGGCTCTTTTGGATGCTGAAATGGCGGGTTTCTGGGCCAAGCTTCCGTTGATTCGGAAGCTCCTTTTGTCCCACCCGGAGGTTGAGTTTCTATGGTGGATGGATAGTGATGCAATGTTTACAGATATGGCGTTTGAATTGCCATGGGAGAGGTACAAAGATTCCAACTTTGTGATGCACGGGTGGAACAAGACGGTTTATGATGAGAAAAGTTGGATTGGGCTGAATACCGGGAGTTTTTTGTTGAGGAATACGCAGTGGTCGTTGGATATGCTCGATGCTTGGGCTCCGATGGGACCGAAAGGGAAAATCAGGGAGGAGGCCGGGAAGGTACTCACTAAGGAATTGAAGGGTAGGCCGATTTTCGAAGCTGATGATCAGTCAGCCATGGTCTACATTTTGGCCACTCAAAGACAGAAGTGGGGTGATAAGGTTTATCTTGAGAGTGGATATTATTTGCATGGATATTGGGGGATTTTGGTTGATAGATATGAAGAAATGATTGAGAATTATCGCCCTGGTTTGGGCGACCACCGGTGGCCACTGGTGACGCATTTTGTAGGTTGCAAGCCGTGCGGAAAATTAGCAGATTACCCGGTTGAGAGATGCTTGAAGCAGATGGATAGAGCTTTTAACTTTGGGGACAATCAGATTCTTCAGATCTATGGTTTCACGCACCGGTCATTGGGTAGTAGAAGAGTTAAGAGAGTTAGGAACGAGATAAACAATCCGCTCGAGGTTAAAGATGAACATGGATTGCTTCATCCGGCATTCAAGGCCGCCAAGGTATCGTCTTCTTAG

Protein Analysis

446

Amino Acids

51.43

Weight (kDa)

8.34

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_34 PF05637 135 - 373 5.1e-64 galactosyl transferase GMA12/MNN10 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1270
AccI GTMKAC 1 cut(s) 930
AccII CGCG 3 cut(s) 156, 195, 215
AciI CCGC 9 cut(s) 28, 172, 178, 182, 193, 563, 1113, 1268, 1317
AclWI GGATC 3 cut(s) 25, 38, 58
AcoI YGGCCR 2 cut(s) 939, 1076
AcsI RAATTY 1 cut(s) 385
AcuI CTGAAG 1 cut(s) 1178
AcyI GRCGYC 1 cut(s) 218
AfaI GTAC 2 cut(s) 692, 870
AgeI ACCGGT 2 cut(s) 1071, 1215
AgsI TTSAA 5 cut(s) 478, 674, 886, 1150, 1312
AjnI CCWGG 3 cut(s) 198, 397, 1054
AloI GAACNNNNNNTCC 2 cut(s) 126, 158
AluBI AGCT 8 cut(s) 12, 41, 262, 292, 580, 598, 908, 1166
AluI AGCT 8 cut(s) 12, 41, 262, 292, 580, 598, 908, 1166
Alw21I GWGCWC 2 cut(s) 14, 43
AlwI GGATC 3 cut(s) 25, 38, 58
Ama87I CYCGRG 3 cut(s) 146, 408, 1271
AoxI GGCC 8 cut(s) 186, 395, 573, 858, 893, 939, 1076, 1314
ApoI RAATTY 1 cut(s) 385
ArsI GACNNNNNNTTYG 2 cut(s) 415, 447
AsiGI ACCGGT 2 cut(s) 1071, 1215
AspS9I GGNCC 7 cut(s) 187, 208, 226, 320, 395, 573, 833
AsuC2I CCSGG 7 cut(s) 131, 409, 410, 614, 769, 862, 1133
AsuHPI GGTGA 5 cut(s) 290, 433, 473, 974, 1096
AsuII TTCGAA 2 cut(s) 332, 903
AvaI CYCGRG 3 cut(s) 146, 408, 1271
AvaII GGWCC 4 cut(s) 208, 226, 320, 833
BaeGI GKGCMC 1 cut(s) 104
BalI TGGCCA 2 cut(s) 941, 1078
BamHI GGATCC 1 cut(s) 30
BanII GRGCYC 3 cut(s) 14, 43, 826
BbsI GAAGAC 2 cut(s) 423, 1323
Bbv12I GWGCWC 2 cut(s) 14, 43
BbvCI CCTCAGC 1 cut(s) 362
BccI CCATC 3 cut(s) 631, 823, 1150
BceAI ACGGC 2 cut(s) 205, 1093
BciT130I CCWGG 3 cut(s) 200, 399, 1056
BclI TGATCA 2 cut(s) 463, 913
BcnI CCSGG 7 cut(s) 131, 409, 410, 614, 769, 862, 1133
BglII AGATCT 1 cut(s) 1197
BisI GCNGC 1 cut(s) 1317
BlsI GCNGC 1 cut(s) 1318
Bme18I GGWCC 4 cut(s) 208, 226, 320, 833
BmeT110I CYCGRG 3 cut(s) 146, 408, 1271
BmgT120I GGNCC 7 cut(s) 187, 208, 226, 320, 395, 573, 833
BmiI GGNNCC 7 cut(s) 32, 112, 127, 228, 322, 825, 834
BmrI ACTGGG 1 cut(s) 435
BmsI GCATC 5 cut(s) 541, 637, 702, 805, 1133
BmuI ACTGGG 1 cut(s) 435
BpiI GAAGAC 2 cut(s) 423, 1323
BpmI CTGGAG 1 cut(s) 221
Bpu10I CCTNAGC 1 cut(s) 362
Bpu14I TTCGAA 2 cut(s) 332, 903
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 7 cut(s) 131, 409, 410, 614, 769, 862, 1133
Bsa29I ATCGAT 1 cut(s) 21
BsaHI GRCGYC 1 cut(s) 218
BsaJI CCNNGG 8 cut(s) 54, 129, 407, 408, 680, 924, 1054, 1320
BsaWI WCCGGW 3 cut(s) 454, 1071, 1215
BsaXI ACNNNNNCTCC 4 cut(s) 152, 182, 608, 638
Bse118I RCCGGY 3 cut(s) 113, 1071, 1215
Bse1I ACTGG 2 cut(s) 430, 1086
Bse3DI GCAATG 1 cut(s) 657
BseBI CCWGG 3 cut(s) 200, 399, 1056
BseCI ATCGAT 1 cut(s) 21
BseDI CCNNGG 8 cut(s) 54, 129, 407, 408, 680, 924, 1054, 1320
BseGI GGATG 3 cut(s) 556, 642, 1300
BseMI GCAATG 1 cut(s) 657
BseMII CTCAG 1 cut(s) 353
BseNI ACTGG 2 cut(s) 430, 1086
BseRI GAGGAG 3 cut(s) 218, 296, 869
BseSI GKGCMC 1 cut(s) 104
Bsh1236I CGCG 3 cut(s) 156, 195, 215
Bsh1285I CGRYCG 3 cut(s) 21, 25, 108
BshFI GGCC 8 cut(s) 188, 397, 575, 860, 895, 941, 1078, 1316
BshTI ACCGGT 2 cut(s) 1071, 1215
BshVI ATCGAT 1 cut(s) 21
BsiEI CGRYCG 3 cut(s) 21, 25, 108
BsiHKAI GWGCWC 2 cut(s) 14, 43
BsiHKCI CYCGRG 3 cut(s) 146, 408, 1271
BslFI GGGAC 4 cut(s) 353, 592, 846, 1193
BsmFI GGGAC 4 cut(s) 353, 592, 846, 1193
BsmI GAATGC 1 cut(s) 1307
BsnI GGCC 8 cut(s) 188, 397, 575, 860, 895, 941, 1078, 1316
BsoBI CYCGRG 3 cut(s) 146, 408, 1271
Bsp119I TTCGAA 2 cut(s) 332, 903
Bsp1286I GDGCHC 4 cut(s) 14, 43, 104, 826
Bsp143I GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
Bsp19I CCATGG 2 cut(s) 680, 924
Bsp68I TCGCGA 1 cut(s) 156
BspACI CCGC 9 cut(s) 28, 172, 178, 182, 193, 563, 1113, 1268, 1317
BspANI GGCC 8 cut(s) 188, 397, 575, 860, 895, 941, 1078, 1316
BspCNI CTCAG 1 cut(s) 354
BspDI ATCGAT 1 cut(s) 21
BspFNI CGCG 3 cut(s) 156, 195, 215
BspLI GGNNCC 7 cut(s) 32, 112, 127, 228, 322, 825, 834
BspPI GGATC 3 cut(s) 25, 38, 58
BspT104I TTCGAA 2 cut(s) 332, 903
BsrBI CCGCTC 1 cut(s) 1270
BsrDI GCAATG 1 cut(s) 657
BsrFI RCCGGY 3 cut(s) 113, 1071, 1215
BsrI ACTGG 2 cut(s) 430, 1086
BssAI RCCGGY 3 cut(s) 113, 1071, 1215
BssECI CCNNGG 8 cut(s) 54, 129, 407, 408, 680, 924, 1054, 1320
BssMI GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
BssNI GRCGYC 1 cut(s) 218
BssT1I CCWWGG 4 cut(s) 54, 680, 924, 1320
Bst2UI CCWGG 3 cut(s) 200, 399, 1056
Bst4CI ACNGT 2 cut(s) 85, 733
Bst6I CTCTTC 1 cut(s) 1228
BstACI GRCGYC 1 cut(s) 218
BstAPI GCANNNNNTGC 1 cut(s) 1110
BstBI TTCGAA 2 cut(s) 332, 903
BstC8I GCNNGC 4 cut(s) 115, 176, 180, 1106
BstDEI CTNAG 3 cut(s) 362, 876, 1335
BstDSI CCRYGG 2 cut(s) 680, 924
BstENI CCTNNNNNAGG 1 cut(s) 203
BstF5I GGATG 3 cut(s) 556, 642, 1300
BstFNI CGCG 3 cut(s) 156, 195, 215
BstKTI GATC 8 cut(s) 21, 25, 33, 66, 108, 466, 916, 1200
BstMBI GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
BstMCI CGRYCG 3 cut(s) 21, 25, 108
BstMWI GCNNNNNNNGC 5 cut(s) 403, 412, 560, 1110, 1313
BstNI CCWGG 3 cut(s) 200, 399, 1056
BstSLI GKGCMC 1 cut(s) 104
BstUI CGCG 3 cut(s) 156, 195, 215
BstV2I GAAGAC 2 cut(s) 423, 1323
BstX2I RGATCY 2 cut(s) 30, 1197
BstYI RGATCY 2 cut(s) 30, 1197
Bsu15I ATCGAT 1 cut(s) 21
BsuRI GGCC 8 cut(s) 188, 397, 575, 860, 895, 941, 1078, 1316
BsuTUI ATCGAT 1 cut(s) 21
BtgI CCRYGG 2 cut(s) 680, 924
BtsCI GGATG 3 cut(s) 556, 642, 1300
BtsI GCAGTG 1 cut(s) 800
BtsIMutI CAGTG 2 cut(s) 800, 1079
BtuMI TCGCGA 1 cut(s) 156
Cac8I GCNNGC 4 cut(s) 115, 176, 180, 1106
Cfr10I RCCGGY 3 cut(s) 113, 1071, 1215
Cfr13I GGNCC 7 cut(s) 187, 208, 226, 320, 395, 573, 833
Cfr9I CCCGGG 1 cut(s) 408
ClaI ATCGAT 1 cut(s) 21
CseI GACGC 3 cut(s) 184, 226, 1096
Csp6I GTAC 2 cut(s) 691, 869
CspAI ACCGGT 2 cut(s) 1071, 1215
CviAII CATG 5 cut(s) 515, 681, 925, 998, 1289
CviQI GTAC 2 cut(s) 691, 869
DdeI CTNAG 3 cut(s) 362, 876, 1335
DpnI GATC 8 cut(s) 20, 24, 32, 65, 107, 465, 915, 1199
DpnII GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
EaeI YGGCCR 2 cut(s) 939, 1076
Eam1104I CTCTTC 1 cut(s) 1228
EarI CTCTTC 1 cut(s) 1228
EciI GGCGGA 2 cut(s) 43, 197
Ecl136II GAGCTC 2 cut(s) 12, 41
Eco130I CCWWGG 4 cut(s) 54, 680, 924, 1320
Eco24I GRGCYC 3 cut(s) 14, 43, 826
Eco47I GGWCC 4 cut(s) 208, 226, 320, 833
Eco53kI GAGCTC 2 cut(s) 12, 41
Eco57I CTGAAG 1 cut(s) 1178
Eco88I CYCGRG 3 cut(s) 146, 408, 1271
EcoICRI GAGCTC 2 cut(s) 12, 41
EcoNI CCTNNNNNAGG 1 cut(s) 203
EcoRII CCWGG 3 cut(s) 198, 397, 1054
EcoT14I CCWWGG 4 cut(s) 54, 680, 924, 1320
EcoT38I GRGCYC 3 cut(s) 14, 43, 826
ErhI CCWWGG 4 cut(s) 54, 680, 924, 1320
FaeI CATG 5 cut(s) 518, 684, 928, 1001, 1292
FaqI GGGAC 4 cut(s) 353, 592, 846, 1193
FatI CATG 5 cut(s) 514, 680, 924, 997, 1288
FauI CCCGC 3 cut(s) 171, 179, 556
FbaI TGATCA 2 cut(s) 463, 913
FblI GTMKAC 1 cut(s) 930
Fnu4HI GCNGC 1 cut(s) 1317
FokI GGATG 3 cut(s) 563, 649, 1287
FriOI GRGCYC 3 cut(s) 14, 43, 826
Fsp4HI GCNGC 1 cut(s) 1317
GluI GCNGC 1 cut(s) 1317
GsuI CTGGAG 1 cut(s) 221
HaeIII GGCC 8 cut(s) 188, 397, 575, 860, 895, 941, 1078, 1316
HgaI GACGC 3 cut(s) 184, 226, 1096
Hin1I GRCGYC 1 cut(s) 218
Hin1II CATG 5 cut(s) 518, 684, 928, 1001, 1292
HindIII AAGCTT 1 cut(s) 578
HinfI GANTC 4 cut(s) 151, 589, 698, 1189
HphI GGTGA 5 cut(s) 290, 433, 473, 974, 1096
Hpy166II GTNNAC 3 cut(s) 211, 657, 931
Hpy188I TCNGA 8 cut(s) 110, 125, 226, 320, 594, 828, 1188, 1197
Hpy188III TCNNGA 5 cut(s) 34, 61, 148, 155, 977
Hpy8I GTNNAC 3 cut(s) 211, 657, 931
Hpy99I CGWCG 2 cut(s) 220, 226
HpyAV CCTTC 5 cut(s) 104, 256, 269, 859, 880
HpyCH4III ACNGT 2 cut(s) 85, 733
HpyCH4V TGCA 4 cut(s) 650, 715, 997, 1104
HpyF10VI GCNNNNNNNGC 5 cut(s) 403, 412, 560, 1110, 1313
HpyF3I CTNAG 3 cut(s) 362, 876, 1335
Hsp92I GRCGYC 1 cut(s) 218
Hsp92II CATG 5 cut(s) 518, 684, 928, 1001, 1292
KroI GCCGGC 1 cut(s) 113
KroNI GCCGGC 1 cut(s) 115
Ksp22I TGATCA 2 cut(s) 463, 913
Kzo9I GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
LmnI GCTCC 5 cut(s) 9, 110, 267, 603, 829
LweI GCATC 5 cut(s) 541, 637, 702, 805, 1133
MaeIII GTNAC 3 cut(s) 58, 421, 1084
MalI GATC 8 cut(s) 20, 24, 32, 65, 107, 465, 915, 1199
MbiI CCGCTC 1 cut(s) 1270
MboI GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
MboII GAAGA 5 cut(s) 423, 1043, 1184, 1245, 1323
MflI RGATCY 2 cut(s) 30, 1197
MhlI GDGCHC 4 cut(s) 14, 43, 104, 826
MlsI TGGCCA 2 cut(s) 941, 1078
MluCI AATT 8 cut(s) 334, 376, 385, 495, 674, 881, 1045, 1118
MluNI TGGCCA 2 cut(s) 941, 1078
MmeI TCCRAC 4 cut(s) 204, 726, 731, 783
Mox20I TGGCCA 2 cut(s) 941, 1078
MroNI GCCGGC 1 cut(s) 113
MscI TGGCCA 2 cut(s) 941, 1078
MseI TTAA 5 cut(s) 255, 486, 1170, 1239, 1278
Msp20I TGGCCA 2 cut(s) 941, 1078
Mva1269I GAATGC 1 cut(s) 1307
MvaI CCWGG 3 cut(s) 200, 399, 1056
MvnI CGCG 3 cut(s) 156, 195, 215
MwoI GCNNNNNNNGC 5 cut(s) 403, 412, 560, 1110, 1313
NaeI GCCGGC 1 cut(s) 115
NciI CCSGG 7 cut(s) 131, 409, 410, 614, 769, 862, 1133
NcoI CCATGG 2 cut(s) 680, 924
NdeII GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
NgoMIV GCCGGC 1 cut(s) 113
NlaIII CATG 5 cut(s) 518, 684, 928, 1001, 1292
NlaIV GGNNCC 7 cut(s) 32, 112, 127, 228, 322, 825, 834
NmuCI GTSAC 3 cut(s) 58, 421, 1084
NruI TCGCGA 1 cut(s) 156
NspV TTCGAA 2 cut(s) 332, 903
PaeR7I CTCGAG 2 cut(s) 146, 1271
PcsI WCGNNNNNNNCGW 2 cut(s) 153, 797
PctI GAATGC 1 cut(s) 1307
PdiI GCCGGC 1 cut(s) 115
PfeI GAWTC 4 cut(s) 151, 589, 698, 1189
PflFI GACNNNGTC 2 cut(s) 220, 427
PfoI TCCNGGA 1 cut(s) 198
PinAI ACCGGT 2 cut(s) 1071, 1215
PkrI GCNGC 1 cut(s) 1318
Ple19I CGATCG 3 cut(s) 21, 25, 108
Psp124BI GAGCTC 2 cut(s) 14, 43
Psp6I CCWGG 3 cut(s) 198, 397, 1054
PspGI CCWGG 3 cut(s) 198, 397, 1054
PspN4I GGNNCC 7 cut(s) 32, 112, 127, 228, 322, 825, 834
PspPI GGNCC 7 cut(s) 187, 208, 226, 320, 395, 573, 833
PspXI VCTCGAGB 1 cut(s) 1271
PsuI RGATCY 2 cut(s) 30, 1197
PsyI GACNNNGTC 2 cut(s) 220, 427
PvuI CGATCG 3 cut(s) 21, 25, 108
RruI TCGCGA 1 cut(s) 156
RsaI GTAC 2 cut(s) 692, 870
RsaNI GTAC 2 cut(s) 691, 869
SacI GAGCTC 2 cut(s) 14, 43
SaqAI TTAA 5 cut(s) 255, 486, 1170, 1239, 1278
SatI GCNGC 1 cut(s) 1317
Sau3AI GATC 8 cut(s) 18, 22, 30, 63, 105, 463, 913, 1197
Sau96I GGNCC 7 cut(s) 187, 208, 226, 320, 395, 573, 833
SduI GDGCHC 4 cut(s) 14, 43, 104, 826
SfaNI GCATC 5 cut(s) 541, 637, 702, 805, 1133
Sfr274I CTCGAG 2 cut(s) 146, 1271
SfuI TTCGAA 2 cut(s) 332, 903
SgrAI CRCCGGYG 1 cut(s) 1071
SinI GGWCC 4 cut(s) 208, 226, 320, 833
SlaI CTCGAG 2 cut(s) 146, 1271
SmaI CCCGGG 1 cut(s) 410
SmlI CTYRAG 3 cut(s) 146, 977, 1271
SmoI CTYRAG 3 cut(s) 146, 977, 1271
Sse9I AATT 8 cut(s) 334, 376, 385, 495, 674, 881, 1045, 1118
SsiI CCGC 9 cut(s) 28, 172, 178, 182, 193, 563, 1113, 1268, 1317
SstI GAGCTC 2 cut(s) 14, 43
StyI CCWWGG 4 cut(s) 54, 680, 924, 1320
TaaI ACNGT 2 cut(s) 85, 733
TaqII GACCGA 1 cut(s) 850
TasI AATT 8 cut(s) 334, 376, 385, 495, 674, 881, 1045, 1118
TauI GCSGC 1 cut(s) 1319
TfiI GAWTC 4 cut(s) 151, 589, 698, 1189
Tru1I TTAA 5 cut(s) 255, 486, 1170, 1239, 1278
Tru9I TTAA 5 cut(s) 255, 486, 1170, 1239, 1278
TscAI CASTG 2 cut(s) 800, 1086
TseFI GTSAC 3 cut(s) 58, 421, 1084
Tsp45I GTSAC 3 cut(s) 58, 421, 1084
TspDTI ATGAA 5 cut(s) 288, 379, 1044, 1289, 1299
TspGWI ACGGA 1 cut(s) 573
TspMI CCCGGG 1 cut(s) 408
TspRI CASTG 2 cut(s) 800, 1086
Tth111I GACNNNGTC 2 cut(s) 220, 427
VpaK11BI GGWCC 4 cut(s) 208, 226, 320, 833
XagI CCTNNNNNAGG 1 cut(s) 203
XapI RAATTY 1 cut(s) 385
XhoI CTCGAG 2 cut(s) 146, 1271
XmaI CCCGGG 1 cut(s) 408
XmiI GTMKAC 1 cut(s) 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.