Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003804

Physical Location & Seq

Genomic Coordinates Reverse (-)

58694756 .. 58696120

Gene Structure 1365 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG356900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGATATTAGAGAAATGCATAGGAGCTCAAAGATGTCGGAGGATCCAGCGAGCTCTCCGGCACGGCAAGGTCACAATCCTCTGCCTGGTCCTCACCGTGGTCGTCCTACGTGGCACAATCGGAGCCGGAAAGTTCGGCACCCCGGAGCAGGACTTCATCGAGATTCGCGACCACTTCTACTCCCGCAAGCGGGCGGAGCCCCACCGCGTCCTCGAGGAGGTCCAAACGACGTCGTCCGACGACGACGACCCCAACAACAACAACTACAACGCCTTCGACATCAACACGATCCTCAAGGACGAAGGCGAGGAGGAGAAACCCGACCCGAGTAAGCCCTACACTCTGGGACCCAAGATTTCAAATTGGGACGAGCAGAGATCGAAATGGCTGAAAAAGAACCCCAATTTCCCGAATTTCGTCGGGCCCAACAAGCCCAGGGTGCTTCTGGTGACTGGGTCGTCGCCAAAACCCTGCGAGAACCCGGTAGGTGATCATTATCTGTTGAAGTCTATTAAGAACAAGATTGATTATTGTAGGTTGCACGGGATTGAGGTTTTCTACAATATGGCTCTTTTGGATGCTGAAATGGCTGGGTTTTGGGCCAAGCTTCCGCTGATTCGGAAGCTGCTTTTGTCTCACCCGGAAGTCGAGTTTCTGTGGTGGATGGATAGTGATGCTATGTTCACAGATATGGCTTTCGAGTTGCCTTGGGAGAGGTACAAAGATTCCAACTTTGTGATGCATGGCTGGAATGAGATGGTTTATGATGACAAGAATTGGATTGGATTGAATACCGGTAGCTTTTTGTTGAGGAATTGCCAGTGGTCTTTGGACATGCTTGATGCTTGGGCTCCAATGGGGCCGAAAGGAAAGGTTAGGGATGAGGCTGGGAAGATATTGACTAGCGCACTTAAGAATAGGCCGGTGTTTGAAGCTGACGATCAGTCGGCTATGGTTTATATATTGGCTACTCAGAGGGAGAAGTGGGGTGATAAGGTTTATCTCGAGAATGCCTATTATTTACATGGTTATTGGGGGATTTTGGTTGATAGATATGAGGAAATGATTGAGAATTATCATCCTGGTTTGGGTGATCATCGTTGGCCGCTAGTGACACATTTTGTGGGTTGCAAGCCGTGTGGGAAGTTTGGAGATTACCCAGTTGAGAGATGTTTGAAGCAGATGGACAGGGCTTTTAACTTTGGTGATAATCAGGTTCTTCAAATCTATGGATTCACACACAAGTCCTTGGCTAGTAGACGAGTTAAGAGAGTTCGAAATGAAACGAGCAAGCCACTTAAGGTTAAAGACGAACTCGGGTTGCTTCATCCTGCGTTTAAGGCTGTTAAGGTATCATCTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009987 GO:0010383 GO:0010410 GO:0010411 GO:0012505 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0031410 GO:0031982 GO:0031984 GO:0033843 GO:0035252 GO:0042285 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046983 GO:0071554 GO:0071704 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_34

Protein Analysis

454

Amino Acids

52.5

Weight (kDa)

8.22

Isoelectric Point (pI)

32.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_34	PF05637	144 - 383	5.2e-66	galactosyl transferase GMA12/MNN10 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62720 AT3G62720 AT4G02500
fragaria_vesca	FvH4_2g25410 FvH4_4g18040
malus_domestica	MD03G1285400.v1.1 MD11G1304800.v1.1 MD13G1168600.v1.1 MD16G1169000.v1.1
prunus_persica	Prupe.1G136700_v2.0.a1 Prupe.8G258300_v2.0.a1
pyrus_communis	pycom03g22630 pycom11g26660 pycom13g14420 pycom16g14220
rosa_chinensis	RchiOBHm_Chr4g0422251 RchiOBHm_Chr6g0293591
rosa_laevigata	RLG00000007625 RLG00000011938
rosa_multiflora	Rmu_sc0006269.1_g000003
rosa_roxburghii	Rroxscaffold_5G00364360 Rroxscaffold_7G00174060
rosa_rugosa	Rorug04G0178900 Rorug06G0236900
rosa_samantha	Rh4AG238000 Rh4BG241200 Rh4CG253100 Rh4DG236800 Rh6AG349500 Rh6BG356900 Rh6CG363600 Rh6DG350600
rosa_wichuraiana	Rw4G020600 Rw6G030410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	457
AatII	GACGTC	1 cut(s)	233
AbsI	CCTCGAGG	1 cut(s)	212
AccB1I	GGYRCC	1 cut(s)	137
AccI	GTMKAC	1 cut(s)	1258
AccII	CGCG	2 cut(s)	168, 207
AciI	CCGC	6 cut(s)	184, 190, 194, 205, 611, 1106
AclWI	GGATC	3 cut(s)	37, 50, 283
AcoI	YGGCCR	1 cut(s)	1103
AcsI	RAATTY	1 cut(s)	412
AcyI	GRCGYC	1 cut(s)	230
AfaI	GTAC	1 cut(s)	719
AfiI	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1088
AflII	CTTAAG	2 cut(s)	911, 1298
AgeI	ACCGGT	1 cut(s)	794
AgsI	TTSAA	6 cut(s)	360, 505, 790, 932, 1177, 1223
AhdI	GACNNNNNGTC	1 cut(s)	943
AjnI	CCWGG	3 cut(s)	84, 434, 1081
AluBI	AGCT	6 cut(s)	26, 53, 607, 625, 801, 935
AluI	AGCT	6 cut(s)	26, 53, 607, 625, 801, 935
Alw21I	GWGCWC	2 cut(s)	28, 55
Alw26I	GTCTC	1 cut(s)	639
AlwI	GGATC	3 cut(s)	37, 50, 283
Ama87I	CYCGRG	4 cut(s)	212, 325, 1004, 1316
AoxI	GGCC	5 cut(s)	422, 600, 860, 920, 1103
ApaI	GGGCCC	1 cut(s)	426
ApeKI	GCWGC	1 cut(s)	625
ApoI	RAATTY	1 cut(s)	412
AsiGI	ACCGGT	1 cut(s)	794
AspLEI	GCGC	1 cut(s)	908
AspS9I	GGNCC	7 cut(s)	88, 220, 347, 422, 423, 600, 860
AsuC2I	CCSGG	3 cut(s)	143, 482, 641
AsuHPI	GGTGA	7 cut(s)	85, 460, 500, 629, 1001, 1103, 1217
AsuII	TTCGAA	1 cut(s)	1276
AvaI	CYCGRG	4 cut(s)	212, 325, 1004, 1316
AvaII	GGWCC	3 cut(s)	88, 220, 347
BaeGI	GKGCMC	1 cut(s)	426
BamHI	GGATCC	1 cut(s)	42
BanI	GGYRCC	1 cut(s)	137
BanII	GRGCYC	5 cut(s)	28, 55, 201, 426, 853
Bbv12I	GWGCWC	2 cut(s)	28, 55
BbvI	GCAGC	1 cut(s)	612
BccI	CCATC	3 cut(s)	658, 751, 1177
BceAI	ACGGC	2 cut(s)	79, 1120
BciT130I	CCWGG	3 cut(s)	86, 436, 1083
BclI	TGATCA	2 cut(s)	490, 1093
BcnI	CCSGG	3 cut(s)	143, 482, 641
BcoDI	GTCTC	1 cut(s)	639
BfaI	CTAG	4 cut(s)	903, 1109, 1254, 1363
BfrI	CTTAAG	2 cut(s)	911, 1298
BisI	GCNGC	2 cut(s)	626, 1106
BlsI	GCNGC	2 cut(s)	627, 1107
Bme1390I	CCNGG	6 cut(s)	86, 143, 436, 482, 641, 1083
Bme18I	GGWCC	3 cut(s)	88, 220, 347
BmeRI	GACNNNNNGTC	1 cut(s)	943
BmeT110I	CYCGRG	4 cut(s)	212, 325, 1004, 1316
BmgT120I	GGNCC	7 cut(s)	88, 220, 347, 422, 423, 600, 860
BmiI	GGNNCC	9 cut(s)	44, 124, 139, 198, 348, 349, 424, 852, 861
BmrFI	CCNGG	6 cut(s)	86, 143, 436, 482, 641, 1083
BmrI	ACTGGG	2 cut(s)	462, 1154
BmsI	GCATC	4 cut(s)	568, 664, 729, 832
BmuI	ACTGGG	2 cut(s)	462, 1154
Bpu14I	TTCGAA	1 cut(s)	1276
BpuEI	CTTGAG	1 cut(s)	278
BpuMI	CCSGG	3 cut(s)	143, 482, 641
BsaAI	YACGTR	1 cut(s)	110
BsaBI	GATNNNNATC	1 cut(s)	495
BsaHI	GRCGYC	1 cut(s)	230
BsaJI	CCNNGG	6 cut(s)	96, 141, 434, 435, 707, 1248
BsaWI	WCCGGW	1 cut(s)	794
BsaXI	ACNNNNNCTCC	2 cut(s)	164, 194
Bsc4I	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1088
Bse118I	RCCGGY	2 cut(s)	794, 922
Bse1I	ACTGG	3 cut(s)	457, 820, 1160
Bse8I	GATNNNNATC	1 cut(s)	495
BseBI	CCWGG	3 cut(s)	86, 436, 1083
BseDI	CCNNGG	6 cut(s)	96, 141, 434, 435, 707, 1248
BseGI	GGATG	5 cut(s)	583, 669, 886, 1078, 1327
BseJI	GATNNNNATC	1 cut(s)	495
BseLI	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1088
BseMII	CTCAG	1 cut(s)	986
BseNI	ACTGG	3 cut(s)	457, 820, 1160
BseRI	GAGGAG	3 cut(s)	230, 323, 326
BseSI	GKGCMC	1 cut(s)	426
BseXI	GCAGC	1 cut(s)	612
BseYI	CCCAGC	2 cut(s)	590, 887
Bsh1236I	CGCG	2 cut(s)	168, 207
BshFI	GGCC	5 cut(s)	424, 602, 862, 922, 1105
BshNI	GGYRCC	1 cut(s)	137
BshTI	ACCGGT	1 cut(s)	794
BsiHKAI	GWGCWC	2 cut(s)	28, 55
BsiHKCI	CYCGRG	4 cut(s)	212, 325, 1004, 1316
BsiSI	CCGG	7 cut(s)	58, 126, 143, 482, 641, 795, 923
BslFI	GGGAC	2 cut(s)	360, 380
BslI	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1088
BsmAI	GTCTC	1 cut(s)	639
BsmFI	GGGAC	2 cut(s)	360, 380
BsmI	GAATGC	1 cut(s)	1015
BsnI	GGCC	5 cut(s)	424, 602, 862, 922, 1105
BsoBI	CYCGRG	4 cut(s)	212, 325, 1004, 1316
Bsp119I	TTCGAA	1 cut(s)	1276
Bsp120I	GGGCCC	1 cut(s)	422
Bsp1286I	GDGCHC	5 cut(s)	28, 55, 201, 426, 853
Bsp143I	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
Bsp68I	TCGCGA	1 cut(s)	168
BspACI	CCGC	6 cut(s)	184, 190, 194, 205, 611, 1106
BspANI	GGCC	5 cut(s)	424, 602, 862, 922, 1105
BspCNI	CTCAG	1 cut(s)	985
BspFNI	CGCG	2 cut(s)	168, 207
BspLI	GGNNCC	9 cut(s)	44, 124, 139, 198, 348, 349, 424, 852, 861
BspPI	GGATC	3 cut(s)	37, 50, 283
BspT104I	TTCGAA	1 cut(s)	1276
BspT107I	GGYRCC	1 cut(s)	137
BspTI	CTTAAG	2 cut(s)	911, 1298
BsrFI	RCCGGY	2 cut(s)	794, 922
BsrI	ACTGG	3 cut(s)	457, 820, 1160
BssAI	RCCGGY	2 cut(s)	794, 922
BssECI	CCNNGG	6 cut(s)	96, 141, 434, 435, 707, 1248
BssMI	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
BssNI	GRCGYC	1 cut(s)	230
BssT1I	CCWWGG	2 cut(s)	707, 1248
Bst2UI	CCWGG	3 cut(s)	86, 436, 1083
Bst4CI	ACNGT	1 cut(s)	97
BstACI	GRCGYC	1 cut(s)	230
BstAFI	CTTAAG	2 cut(s)	911, 1298
BstBAI	YACGTR	1 cut(s)	110
BstBI	TTCGAA	1 cut(s)	1276
BstC8I	GCNNGC	5 cut(s)	51, 188, 192, 1133, 1292
BstDEI	CTNAG	1 cut(s)	972
BstDSI	CCRYGG	1 cut(s)	96
BstENI	CCTNNNNNAGG	1 cut(s)	215
BstF5I	GGATG	5 cut(s)	583, 669, 886, 1078, 1327
BstFNI	CGCG	2 cut(s)	168, 207
BstHHI	GCGC	1 cut(s)	908
BstKTI	GATC	6 cut(s)	45, 291, 380, 493, 943, 1096
BstMAI	GTCTC	1 cut(s)	639
BstMBI	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
BstMWI	GCNNNNNNNGC	5 cut(s)	196, 430, 439, 587, 1340
BstNI	CCWGG	3 cut(s)	86, 436, 1083
BstNSI	RCATGY	1 cut(s)	838
BstSCI	CCNGG	6 cut(s)	84, 141, 434, 480, 639, 1081
BstSLI	GKGCMC	1 cut(s)	426
BstUI	CGCG	2 cut(s)	168, 207
BstV1I	GCAGC	1 cut(s)	612
BstX2I	RGATCY	1 cut(s)	42
BstYI	RGATCY	1 cut(s)	42
BsuRI	GGCC	5 cut(s)	424, 602, 862, 922, 1105
BtgI	CCRYGG	1 cut(s)	96
BtsCI	GGATG	5 cut(s)	583, 669, 886, 1078, 1327
BtsIMutI	CAGTG	1 cut(s)	827
BtuMI	TCGCGA	1 cut(s)	168
Cac8I	GCNNGC	5 cut(s)	51, 188, 192, 1133, 1292
CfoI	GCGC	1 cut(s)	908
Cfr10I	RCCGGY	2 cut(s)	794, 922
Cfr13I	GGNCC	7 cut(s)	88, 220, 347, 422, 423, 600, 860
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	1 cut(s)	718
CspAI	ACCGGT	1 cut(s)	794
CspCI	CAANNNNNGTGG	2 cut(s)	1120, 1155
CviAII	CATG	3 cut(s)	743, 835, 1025
CviQI	GTAC	1 cut(s)	718
DdeI	CTNAG	1 cut(s)	972
DpnI	GATC	6 cut(s)	44, 290, 379, 492, 942, 1095
DpnII	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
DrdI	GACNNNNNNGTC	1 cut(s)	457
DriI	GACNNNNNGTC	1 cut(s)	943
DseDI	GACNNNNNNGTC	1 cut(s)	457
EaeI	YGGCCR	1 cut(s)	1103
Eam1105I	GACNNNNNGTC	1 cut(s)	943
EciI	GGCGGA	1 cut(s)	209
Ecl136II	GAGCTC	2 cut(s)	26, 53
Eco130I	CCWWGG	2 cut(s)	707, 1248
Eco24I	GRGCYC	5 cut(s)	28, 55, 201, 426, 853
Eco47I	GGWCC	3 cut(s)	88, 220, 347
Eco53kI	GAGCTC	2 cut(s)	26, 53
Eco88I	CYCGRG	4 cut(s)	212, 325, 1004, 1316
EcoICRI	GAGCTC	2 cut(s)	26, 53
EcoNI	CCTNNNNNAGG	1 cut(s)	215
EcoO109I	RGGNCCY	1 cut(s)	347
EcoRII	CCWGG	3 cut(s)	84, 434, 1081
EcoT14I	CCWWGG	2 cut(s)	707, 1248
EcoT22I	ATGCAT	2 cut(s)	20, 744
EcoT38I	GRGCYC	5 cut(s)	28, 55, 201, 426, 853
ErhI	CCWWGG	2 cut(s)	707, 1248
FaeI	CATG	3 cut(s)	746, 838, 1028
FaqI	GGGAC	2 cut(s)	360, 380
FatI	CATG	3 cut(s)	742, 834, 1024
FauI	CCCGC	2 cut(s)	183, 191
FbaI	TGATCA	2 cut(s)	490, 1093
FblI	GTMKAC	1 cut(s)	1258
Fnu4HI	GCNGC	2 cut(s)	626, 1106
FokI	GGATG	5 cut(s)	590, 676, 893, 1065, 1314
FriOI	GRGCYC	5 cut(s)	28, 55, 201, 426, 853
Fsp4HI	GCNGC	2 cut(s)	626, 1106
FspBI	CTAG	4 cut(s)	903, 1109, 1254, 1363
GlaI	GCGC	1 cut(s)	907
GluI	GCNGC	2 cut(s)	626, 1106
GsaI	CCCAGC	2 cut(s)	594, 891
HaeIII	GGCC	5 cut(s)	424, 602, 862, 922, 1105
HapII	CCGG	7 cut(s)	58, 126, 143, 482, 641, 795, 923
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	1 cut(s)	908
Hin1I	GRCGYC	1 cut(s)	230
Hin1II	CATG	3 cut(s)	746, 838, 1028
Hin6I	GCGC	1 cut(s)	906
HinP1I	GCGC	1 cut(s)	906
HindIII	AAGCTT	1 cut(s)	605
HinfI	GANTC	4 cut(s)	163, 616, 725, 1233
HpaII	CCGG	7 cut(s)	58, 126, 143, 482, 641, 795, 923
HphI	GGTGA	7 cut(s)	85, 460, 500, 629, 1001, 1103, 1217
Hpy166II	GTNNAC	2 cut(s)	684, 1259
Hpy188I	TCNGA	5 cut(s)	39, 122, 238, 621, 975
Hpy188III	TCNNGA	5 cut(s)	160, 167, 409, 1004, 1006
Hpy8I	GTNNAC	2 cut(s)	684, 1259
Hpy99I	CGWCG	7 cut(s)	232, 235, 242, 245, 248, 422, 463
HpyAV	CCTTC	2 cut(s)	283, 296
HpyCH4III	ACNGT	1 cut(s)	97
HpyCH4IV	ACGT	2 cut(s)	109, 230
HpyCH4V	TGCA	4 cut(s)	18, 541, 742, 1131
HpyF10VI	GCNNNNNNNGC	5 cut(s)	196, 430, 439, 587, 1340
HpyF3I	CTNAG	1 cut(s)	972
HpySE526I	ACGT	2 cut(s)	109, 230
Hsp92I	GRCGYC	1 cut(s)	230
Hsp92II	CATG	3 cut(s)	746, 838, 1028
HspAI	GCGC	1 cut(s)	906
KflI	GGGWCCC	1 cut(s)	347
Ksp22I	TGATCA	2 cut(s)	490, 1093
Kzo9I	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
LmnI	GCTCC	5 cut(s)	23, 122, 145, 196, 856
Lsp1109I	GCAGC	1 cut(s)	612
LweI	GCATC	4 cut(s)	568, 664, 729, 832
MaeI	CTAG	4 cut(s)	903, 1109, 1254, 1363
MaeII	ACGT	2 cut(s)	109, 230
MaeIII	GTNAC	3 cut(s)	70, 448, 1111
MalI	GATC	6 cut(s)	44, 290, 379, 492, 942, 1095
MboI	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
MboII	GAAGA	3 cut(s)	904, 1211, 1350
MflI	RGATCY	1 cut(s)	42
MhlI	GDGCHC	5 cut(s)	28, 55, 201, 426, 853
MluCI	AATT	6 cut(s)	361, 403, 412, 775, 814, 1072
MmeI	TCCRAC	3 cut(s)	17, 261, 753
Mph1103I	ATGCAT	2 cut(s)	20, 744
MseI	TTAA	8 cut(s)	513, 912, 1197, 1266, 1299, 1305, 1338, 1347
MslI	CAYNNNNRTG	1 cut(s)	689
MspA1I	CMGCKG	1 cut(s)	613
MspCI	CTTAAG	2 cut(s)	911, 1298
MspI	CCGG	7 cut(s)	58, 126, 143, 482, 641, 795, 923
MspR9I	CCNGG	6 cut(s)	86, 143, 436, 482, 641, 1083
Mva1269I	GAATGC	1 cut(s)	1015
MvaI	CCWGG	3 cut(s)	86, 436, 1083
MvnI	CGCG	2 cut(s)	168, 207
MwoI	GCNNNNNNNGC	5 cut(s)	196, 430, 439, 587, 1340
NciI	CCSGG	3 cut(s)	143, 482, 641
NdeII	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
NlaIII	CATG	3 cut(s)	746, 838, 1028
NlaIV	GGNNCC	9 cut(s)	44, 124, 139, 198, 348, 349, 424, 852, 861
NmuCI	GTSAC	3 cut(s)	70, 448, 1111
NruI	TCGCGA	1 cut(s)	168
NsiI	ATGCAT	2 cut(s)	20, 744
NspI	RCATGY	1 cut(s)	838
NspV	TTCGAA	1 cut(s)	1276
PaeR7I	CTCGAG	2 cut(s)	212, 1004
PasI	CCCWGGG	1 cut(s)	435
PcsI	WCGNNNNNNNCGW	1 cut(s)	165
PctI	GAATGC	1 cut(s)	1015
PfeI	GAWTC	4 cut(s)	163, 616, 725, 1233
PflFI	GACNNNGTC	2 cut(s)	232, 454
PinAI	ACCGGT	1 cut(s)	794
PkrI	GCNGC	2 cut(s)	627, 1107
Ppu21I	YACGTR	1 cut(s)	110
PpuMI	RGGWCCY	1 cut(s)	347
Psp124BI	GAGCTC	2 cut(s)	28, 55
Psp5II	RGGWCCY	1 cut(s)	347
Psp6I	CCWGG	3 cut(s)	84, 434, 1081
PspFI	CCCAGC	2 cut(s)	590, 887
PspGI	CCWGG	3 cut(s)	84, 434, 1081
PspN4I	GGNNCC	9 cut(s)	44, 124, 139, 198, 348, 349, 424, 852, 861
PspOMI	GGGCCC	1 cut(s)	422
PspPI	GGNCC	7 cut(s)	88, 220, 347, 422, 423, 600, 860
PspPPI	RGGWCCY	1 cut(s)	347
PspXI	VCTCGAGB	1 cut(s)	212
PsuI	RGATCY	1 cut(s)	42
PsyI	GACNNNGTC	2 cut(s)	232, 454
RruI	TCGCGA	1 cut(s)	168
RsaI	GTAC	1 cut(s)	719
RsaNI	GTAC	1 cut(s)	718
RseI	CAYNNNNRTG	1 cut(s)	689
SacI	GAGCTC	2 cut(s)	28, 55
SaqAI	TTAA	8 cut(s)	513, 912, 1197, 1266, 1299, 1305, 1338, 1347
SatI	GCNGC	2 cut(s)	626, 1106
Sau3AI	GATC	6 cut(s)	42, 288, 377, 490, 940, 1093
Sau96I	GGNCC	7 cut(s)	88, 220, 347, 422, 423, 600, 860
ScrFI	CCNGG	6 cut(s)	86, 143, 436, 482, 641, 1083
SduI	GDGCHC	5 cut(s)	28, 55, 201, 426, 853
SfaNI	GCATC	4 cut(s)	568, 664, 729, 832
Sfr274I	CTCGAG	2 cut(s)	212, 1004
SfuI	TTCGAA	1 cut(s)	1276
SinI	GGWCC	3 cut(s)	88, 220, 347
SlaI	CTCGAG	2 cut(s)	212, 1004
SmiMI	CAYNNNNRTG	1 cut(s)	689
SmlI	CTYRAG	5 cut(s)	212, 293, 911, 1004, 1298
SmoI	CTYRAG	5 cut(s)	212, 293, 911, 1004, 1298
Sse9I	AATT	6 cut(s)	361, 403, 412, 775, 814, 1072
SsiI	CCGC	6 cut(s)	184, 190, 194, 205, 611, 1106
SspMI	CTAG	4 cut(s)	903, 1109, 1254, 1363
SstI	GAGCTC	2 cut(s)	28, 55
StyD4I	CCNGG	6 cut(s)	84, 141, 434, 480, 639, 1081
StyI	CCWWGG	2 cut(s)	707, 1248
TaaI	ACNGT	1 cut(s)	97
TaiI	ACGT	2 cut(s)	112, 233
TaqI	TCGA	8 cut(s)	159, 213, 276, 380, 648, 699, 1005, 1276
TasI	AATT	6 cut(s)	361, 403, 412, 775, 814, 1072
TauI	GCSGC	1 cut(s)	1108
TfiI	GAWTC	4 cut(s)	163, 616, 725, 1233
Tru1I	TTAA	8 cut(s)	513, 912, 1197, 1266, 1299, 1305, 1338, 1347
Tru9I	TTAA	8 cut(s)	513, 912, 1197, 1266, 1299, 1305, 1338, 1347
TscAI	CASTG	1 cut(s)	827
TseFI	GTSAC	3 cut(s)	70, 448, 1111
TseI	GCWGC	1 cut(s)	625
Tsp45I	GTSAC	3 cut(s)	70, 448, 1111
TspDTI	ATGAA	3 cut(s)	145, 1296, 1316
TspRI	CASTG	1 cut(s)	827
Tth111I	GACNNNGTC	2 cut(s)	232, 454
Vha464I	CTTAAG	2 cut(s)	911, 1298
VpaK11BI	GGWCC	3 cut(s)	88, 220, 347
XagI	CCTNNNNNAGG	1 cut(s)	215
XapI	RAATTY	1 cut(s)	412
XceI	RCATGY	1 cut(s)	838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	442
XhoI	CTCGAG	2 cut(s)	212, 1004
XmiI	GTMKAC	1 cut(s)	1258
XspI	CTAG	4 cut(s)	903, 1109, 1254, 1363
ZraI	GACGTC	1 cut(s)	231
Zsp2I	ATGCAT	2 cut(s)	20, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.