Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0011071

Physical Location & Seq

Genomic Coordinates Reverse (-)

14313539 .. 14318021

Gene Structure 4483 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGCTCCCAGGGGTAATCGCGGACGACGACACCATGATCAACACGGCCAACGGTATGATGCAAACGACTTCGTCTAGCAATGCTCAGTCGCCGGGCCTCAAGACCTATTTCAAAACCCCTGAGGGGAAGTACAAGCTTCACTACGAGAAGACGCATCCTTCGGGGCTCCTTCACTTCCCCAATGGCAAAACCGTCACTCAGGCAATACTAGCACAACTTAAGGACAAGCCTGCTCCATCAACCCCGACTGCGCCATCTTCAAGCTTCAGCACTGGCAGTGGCGTACGTTCGGCTGCAGCACGGTTTTTGGGTGGTGCTAATGGGAGCCGGGCGCTTAGTTTTGTTGGAGGGAATGGAGGGAGTAAGAGTGTCAGTGCAAGTAGTAGAGTTGGGTCTTTGGTGGCTTCCAGTTCGAATACTTCAACATCTACTTCGAATTTTGATGGGAAAGGGACTTACTTGATCTTCAATGTGGGGGATGCGATCTTCATCAGTGATTTAAATTCTCAAGACAAGGATCCAATAAAGTCTATACATTTCAGTAATTCAAACCCTGTCTGCCACGCATTCGATCAAGACGCAAAGGATGGTCATGATTTGATTATTGGGTTGAGTTCTGGTGATGTCTACTCAGTGTCACTGAGACAGCAATTGCAGGATGTTGGAAAGAAGCTTGTAGGTGCTCAGCATTATAATAAAGATGGCTCTGTTAGTAACAGCCGTTGTACTAGTATTGCATGGGTTCCTGGTGGTGACGGTGCTTTTGTTGTCGCTCATGCCGATGGGAATCTCAAAGATGGGGCTGGTGATTCTTCATTCCCTATTATCAAAGATCCAGCTCAATTTTCAGTTTCCCATGCACGTTACAATAAGAGTAACCCATTTGCCAGATGGCATATCGGCCAAGGTTATCTACGTGTTTTTGACTACTCAAAGGAGCAACTTATATGCGGTGGAAAAAGTTACTATGGTGCTCTCTTATGTTGCGCTTGGAGCATGGATGGAAAATACATACTCACAGGAGGCGAAGATGATTTAGTTCAAGTTTGGAGCATGGAAGATCGGAAAGTTGTAGCTTGGGGAGAGGGTCACAACTCTTGGGTCAGTGGAGTGGCTTTTGATTCATATTGTTCATCACCAAATTCAGATGGCATGGGGGAAACTGTCATGTACCGGTTTGGTTCCGTCGGTCAGGACACACAGTTGCTTCTGTGGGACCTGGAGATGGATGAGATTGTGGTGCCATTGCGACGATGCCCTCCTGGTGGCTCCCCCACATATAGTGCTGGAAGCCAGTCATCTCACTGGGACAATGCGCTTCCAGTGGGTACCCTGCAGCCTGCTCCAAGCATGCGAGATGTTCCAAAAATCTCACCGCTGGTTGCTCACCGGGTACACACTGAACCCCTCTCTGGCGTAATGTTTACCCAAGAATCCGTTCTCACTGTCTGCAGAGAGGGGCATATAAAAGTTTGGGTGAGACCCGGCGTTTCAGAAACCCAATCAAACAACTCAGCTGAATTAAGTACCAGCTCAAAGGAGAAGCCTTTGTCCTTTGTCAAGGTTGGCAGTTCGAGTTACAAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0007154 GO:0007584 GO:0008150 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0042221 GO:0045013 GO:0045892 GO:0045934 GO:0045990 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061984 GO:0061985 GO:0065007 GO:0070887 GO:0071496 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

530

Amino Acids

56.48

Weight (kDa)

6.73

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	274 - 374	9.9e-09	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	301 - 412	1e-06	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	305 - 375	3.9e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011071)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37160 AT2G37160 AT3G53390
fragaria_vesca	FvH4_6g15710 FvH4_6g15710
malus_domestica	MD04G1099900.v1.1 MD12G1120000.v1.1
prunus_persica	Prupe.6G238200_v2.0.a1
pyrus_communis	pycom04g09500 pycom12g11890
rosa_chinensis	RchiOBHm_Chr3g0469411
rosa_laevigata	RLG00000024351
rosa_multiflora	Rmu_sc0005274.1_g000009
rosa_roxburghii	Rroxscaffold_6G00411910
rosa_rugosa	Rorug03G0101600
rosa_samantha	Rh3AG150600 Rh3BG174300 Rh3CG165300 Rh3DG201100
rosa_wichuraiana	Rw3G014200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	693
Acc65I	GGTACC	1 cut(s)	1328
AccB1I	GGYRCC	2 cut(s)	1240, 1328
AccI	GTMKAC	1 cut(s)	627
AccII	CGCG	1 cut(s)	20
AciI	CCGC	3 cut(s)	20, 951, 1376
AclWI	GGATC	3 cut(s)	512, 525, 827
AcoI	YGGCCR	2 cut(s)	45, 901
AcsI	RAATTY	3 cut(s)	436, 502, 1141
AcuI	CTGAAG	1 cut(s)	250
AfaI	GTAC	7 cut(s)	131, 285, 727, 1172, 1330, 1395, 1528
AfiI	CCNNNNNNNGG	4 cut(s)	123, 1225, 1265, 1412
AflII	CTTAAG	1 cut(s)	218
AflIII	ACRYGT	1 cut(s)	916
AgeI	ACCGGT	1 cut(s)	1173
AgsI	TTSAA	6 cut(s)	112, 261, 423, 469, 549, 1043
AhlI	ACTAGT	1 cut(s)	728
AjnI	CCWGG	4 cut(s)	7, 745, 1218, 1261
AjuI	GAANNNNNNNTTGG	2 cut(s)	1422, 1454
AluBI	AGCT	7 cut(s)	136, 264, 673, 839, 1076, 1517, 1533
AluI	AGCT	7 cut(s)	136, 264, 673, 839, 1076, 1517, 1533
Alw21I	GWGCWC	2 cut(s)	685, 976
Alw26I	GTCTC	2 cut(s)	637, 1474
AlwI	GGATC	3 cut(s)	512, 525, 827
AoxI	GGCC	3 cut(s)	45, 94, 901
ApeKI	GCWGC	3 cut(s)	293, 296, 1336
ApoI	RAATTY	3 cut(s)	436, 502, 1141
ArsI	GACNNNNNNTTYG	4 cut(s)	142, 174, 746, 778
AsiGI	ACCGGT	1 cut(s)	1173
Asp700I	GAANNNNTTC	1 cut(s)	1437
Asp718I	GGTACC	1 cut(s)	1328
AspLEI	GCGC	4 cut(s)	253, 334, 989, 1318
AspS9I	GGNCC	2 cut(s)	94, 1216
AsuC2I	CCSGG	4 cut(s)	93, 329, 1391, 1485
AsuHPI	GGTGA	7 cut(s)	632, 764, 818, 1128, 1365, 1379, 1489
AsuII	TTCGAA	2 cut(s)	413, 434
AvaII	GGWCC	1 cut(s)	1216
AxyI	CCTNAGG	1 cut(s)	120
BamHI	GGATCC	1 cut(s)	517
BanI	GGYRCC	2 cut(s)	1240, 1328
BanII	GRGCYC	1 cut(s)	168
BbsI	GAAGAC	1 cut(s)	155
Bbv12I	GWGCWC	2 cut(s)	685, 976
BbvI	GCAGC	3 cut(s)	280, 308, 1348
BceAI	ACGGC	2 cut(s)	60, 705
BciT130I	CCWGG	4 cut(s)	9, 747, 1220, 1263
BclI	TGATCA	1 cut(s)	36
BcnI	CCSGG	4 cut(s)	93, 329, 1391, 1485
BcoDI	GTCTC	2 cut(s)	637, 1474
BcuI	ACTAGT	1 cut(s)	728
BfaI	CTAG	3 cut(s)	75, 209, 729
BfmI	CTRYAG	3 cut(s)	294, 1334, 1450
BfoI	RGCGCY	1 cut(s)	335
BfrI	CTTAAG	1 cut(s)	218
BisI	GCNGC	3 cut(s)	294, 297, 1337
BlpI	GCTNAGC	1 cut(s)	684
BlsI	GCNGC	3 cut(s)	295, 298, 1338
Bme1390I	CCNGG	8 cut(s)	9, 93, 329, 747, 1220, 1263, 1391, 1485
Bme18I	GGWCC	1 cut(s)	1216
BmgT120I	GGNCC	2 cut(s)	94, 1216
BmiI	GGNNCC	9 cut(s)	167, 326, 519, 744, 1183, 1217, 1242, 1270, 1330
BmrFI	CCNGG	8 cut(s)	9, 93, 329, 747, 1220, 1263, 1391, 1485
BmrI	ACTGGG	1 cut(s)	1315
BmsI	GCATC	4 cut(s)	48, 163, 469, 1244
BmuI	ACTGGG	1 cut(s)	1315
BpiI	GAAGAC	1 cut(s)	155
BpmI	CTGGAG	1 cut(s)	1241
Bpu1102I	GCTNAGC	1 cut(s)	684
Bpu14I	TTCGAA	2 cut(s)	413, 434
BpuEI	CTTGAG	2 cut(s)	83, 492
BpuMI	CCSGG	4 cut(s)	93, 329, 1391, 1485
BsaAI	YACGTR	1 cut(s)	917
BsaBI	GATNNNNATC	2 cut(s)	488, 786
BsaI	GGTCTC	1 cut(s)	1474
BsaJI	CCNNGG	3 cut(s)	7, 8, 904
BsaWI	WCCGGW	1 cut(s)	1173
BsaXI	ACNNNNNCTCC	2 cut(s)	352, 382
Bsc4I	CCNNNNNNNGG	4 cut(s)	123, 1225, 1265, 1412
Bse118I	RCCGGY	1 cut(s)	1173
Bse1I	ACTGG	5 cut(s)	277, 408, 1294, 1310, 1322
Bse21I	CCTNAGG	1 cut(s)	120
Bse3DI	GCAATG	2 cut(s)	85, 1244
Bse8I	GATNNNNATC	2 cut(s)	488, 786
BseBI	CCWGG	4 cut(s)	9, 747, 1220, 1263
BseDI	CCNNGG	3 cut(s)	7, 8, 904
BseGI	GGATG	6 cut(s)	154, 484, 592, 664, 1006, 1234
BseJI	GATNNNNATC	2 cut(s)	488, 786
BseLI	CCNNNNNNNGG	4 cut(s)	123, 1225, 1265, 1412
BseMI	GCAATG	2 cut(s)	85, 1244
BseMII	CTCAG	7 cut(s)	98, 111, 212, 632, 645, 698, 1527
BseNI	ACTGG	5 cut(s)	277, 408, 1294, 1310, 1322
BseXI	GCAGC	3 cut(s)	280, 308, 1348
Bsh1236I	CGCG	1 cut(s)	20
BshFI	GGCC	3 cut(s)	47, 96, 903
BshNI	GGYRCC	2 cut(s)	1240, 1328
BshTI	ACCGGT	1 cut(s)	1173
BsiHKAI	GWGCWC	2 cut(s)	685, 976
BsiSI	CCGG	5 cut(s)	92, 328, 1174, 1390, 1485
BsiWI	CGTACG	1 cut(s)	283
BslFI	GGGAC	3 cut(s)	466, 1229, 1322
BslI	CCNNNNNNNGG	4 cut(s)	123, 1225, 1265, 1412
BsmAI	GTCTC	2 cut(s)	637, 1474
BsmFI	GGGAC	3 cut(s)	466, 1229, 1322
BsmI	GAATGC	1 cut(s)	566
BsnI	GGCC	3 cut(s)	47, 96, 903
Bso31I	GGTCTC	1 cut(s)	1474
Bsp119I	TTCGAA	2 cut(s)	413, 434
Bsp1286I	GDGCHC	3 cut(s)	168, 685, 976
Bsp143I	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
Bsp1720I	GCTNAGC	1 cut(s)	684
BspACI	CCGC	3 cut(s)	20, 951, 1376
BspANI	GGCC	3 cut(s)	47, 96, 903
BspCNI	CTCAG	7 cut(s)	97, 112, 211, 633, 644, 697, 1526
BspFNI	CGCG	1 cut(s)	20
BspHI	TCATGA	1 cut(s)	592
BspLI	GGNNCC	9 cut(s)	167, 326, 519, 744, 1183, 1217, 1242, 1270, 1330
BspMAI	CTGCAG	3 cut(s)	298, 1338, 1454
BspPI	GGATC	3 cut(s)	512, 525, 827
BspT104I	TTCGAA	2 cut(s)	413, 434
BspT107I	GGYRCC	2 cut(s)	1240, 1328
BspTI	CTTAAG	1 cut(s)	218
BspTNI	GGTCTC	1 cut(s)	1474
BsrDI	GCAATG	2 cut(s)	85, 1244
BsrFI	RCCGGY	1 cut(s)	1173
BsrI	ACTGG	5 cut(s)	277, 408, 1294, 1310, 1322
BssAI	RCCGGY	1 cut(s)	1173
BssECI	CCNNGG	3 cut(s)	7, 8, 904
BssMI	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
BssT1I	CCWWGG	1 cut(s)	904
Bst2UI	CCWGG	4 cut(s)	9, 747, 1220, 1263
Bst4CI	ACNGT	7 cut(s)	53, 193, 303, 758, 1165, 1203, 1447
BstAFI	CTTAAG	1 cut(s)	218
BstBAI	YACGTR	1 cut(s)	917
BstBI	TTCGAA	2 cut(s)	413, 434
BstC8I	GCNNGC	3 cut(s)	231, 1341, 1352
BstDEI	CTNAG	8 cut(s)	84, 120, 198, 335, 631, 641, 684, 1513
BstF5I	GGATG	6 cut(s)	154, 484, 592, 664, 1006, 1234
BstFNI	CGCG	1 cut(s)	20
BstH2I	RGCGCY	1 cut(s)	335
BstHHI	GCGC	4 cut(s)	253, 334, 989, 1318
BstKTI	GATC	7 cut(s)	39, 465, 486, 520, 574, 835, 1063
BstMAI	GTCTC	2 cut(s)	637, 1474
BstMBI	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
BstMWI	GCNNNNNNNGC	2 cut(s)	209, 993
BstNI	CCWGG	4 cut(s)	9, 747, 1220, 1263
BstNSI	RCATGY	1 cut(s)	1354
BstSCI	CCNGG	8 cut(s)	7, 91, 327, 745, 1218, 1261, 1389, 1483
BstSFI	CTRYAG	3 cut(s)	294, 1334, 1450
BstUI	CGCG	1 cut(s)	20
BstV1I	GCAGC	3 cut(s)	280, 308, 1348
BstV2I	GAAGAC	1 cut(s)	155
BstX2I	RGATCY	2 cut(s)	517, 832
BstYI	RGATCY	2 cut(s)	517, 832
Bsu36I	CCTNAGG	1 cut(s)	120
BsuRI	GGCC	3 cut(s)	47, 96, 903
BtsCI	GGATG	6 cut(s)	154, 484, 592, 664, 1006, 1234
BtsI	GCAGTG	1 cut(s)	283
Cac8I	GCNNGC	3 cut(s)	231, 1341, 1352
CciI	TCATGA	1 cut(s)	592
CfoI	GCGC	4 cut(s)	253, 334, 989, 1318
Cfr10I	RCCGGY	1 cut(s)	1173
Cfr13I	GGNCC	2 cut(s)	94, 1216
CseI	GACGC	2 cut(s)	160, 587
Csp6I	GTAC	7 cut(s)	130, 284, 726, 1171, 1329, 1394, 1527
CspAI	ACCGGT	1 cut(s)	1173
CviQI	GTAC	7 cut(s)	130, 284, 726, 1171, 1329, 1394, 1527
DdeI	CTNAG	8 cut(s)	84, 120, 198, 335, 631, 641, 684, 1513
DpnI	GATC	7 cut(s)	38, 464, 485, 519, 573, 834, 1062
DpnII	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
DraI	TTTAAA	1 cut(s)	501
EaeI	YGGCCR	2 cut(s)	45, 901
Eco130I	CCWWGG	1 cut(s)	904
Eco24I	GRGCYC	1 cut(s)	168
Eco31I	GGTCTC	1 cut(s)	1474
Eco47I	GGWCC	1 cut(s)	1216
Eco57I	CTGAAG	1 cut(s)	250
Eco81I	CCTNAGG	1 cut(s)	120
EcoO109I	RGGNCCY	1 cut(s)	1216
EcoRII	CCWGG	4 cut(s)	7, 745, 1218, 1261
EcoT14I	CCWWGG	1 cut(s)	904
EcoT38I	GRGCYC	1 cut(s)	168
ErhI	CCWWGG	1 cut(s)	904
FaqI	GGGAC	3 cut(s)	466, 1229, 1322
FbaI	TGATCA	1 cut(s)	36
FblI	GTMKAC	1 cut(s)	627
Fnu4HI	GCNGC	3 cut(s)	294, 297, 1337
FokI	GGATG	6 cut(s)	141, 491, 599, 671, 1013, 1241
FriOI	GRGCYC	1 cut(s)	168
Fsp4HI	GCNGC	3 cut(s)	294, 297, 1337
FspBI	CTAG	3 cut(s)	75, 209, 729
GlaI	GCGC	4 cut(s)	252, 333, 988, 1317
GluI	GCNGC	3 cut(s)	294, 297, 1337
GsuI	CTGGAG	1 cut(s)	1241
HaeII	RGCGCY	1 cut(s)	335
HaeIII	GGCC	3 cut(s)	47, 96, 903
HapII	CCGG	5 cut(s)	92, 328, 1174, 1390, 1485
HgaI	GACGC	2 cut(s)	160, 587
HhaI	GCGC	4 cut(s)	253, 334, 989, 1318
Hin6I	GCGC	4 cut(s)	251, 332, 987, 1316
HinP1I	GCGC	4 cut(s)	251, 332, 987, 1316
HindIII	AAGCTT	3 cut(s)	134, 262, 671
HinfI	GANTC	4 cut(s)	787, 809, 1121, 1433
HpaII	CCGG	5 cut(s)	92, 328, 1174, 1390, 1485
HphI	GGTGA	7 cut(s)	632, 764, 818, 1128, 1365, 1379, 1489
Hpy166II	GTNNAC	3 cut(s)	628, 1396, 1425
Hpy188I	TCNGA	3 cut(s)	1065, 1147, 1495
Hpy188III	TCNNGA	5 cut(s)	100, 509, 575, 593, 1193
Hpy8I	GTNNAC	3 cut(s)	628, 1396, 1425
Hpy99I	CGWCG	3 cut(s)	29, 1190, 1254
HpyAV	CCTTC	2 cut(s)	168, 179
HpyCH4III	ACNGT	7 cut(s)	53, 193, 303, 758, 1165, 1203, 1447
HpyCH4IV	ACGT	3 cut(s)	286, 862, 916
HpyCH4V	TGCA	8 cut(s)	61, 296, 377, 655, 737, 860, 1336, 1452
HpyF10VI	GCNNNNNNNGC	2 cut(s)	209, 993
HpyF3I	CTNAG	8 cut(s)	84, 120, 198, 335, 631, 641, 684, 1513
HpySE526I	ACGT	3 cut(s)	286, 862, 916
HspAI	GCGC	4 cut(s)	251, 332, 987, 1316
KpnI	GGTACC	1 cut(s)	1332
Ksp22I	TGATCA	1 cut(s)	36
Kzo9I	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
LmnI	GCTCC	9 cut(s)	9, 171, 238, 324, 937, 993, 1050, 1274, 1348
Lsp1109I	GCAGC	3 cut(s)	280, 308, 1348
LweI	GCATC	4 cut(s)	48, 163, 469, 1244
MaeI	CTAG	3 cut(s)	75, 209, 729
MaeII	ACGT	3 cut(s)	286, 862, 916
MaeIII	GTNAC	9 cut(s)	193, 636, 713, 752, 863, 875, 962, 1088, 1577
MalI	GATC	7 cut(s)	38, 464, 485, 519, 573, 834, 1062
MboI	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
MboII	GAAGA	7 cut(s)	160, 249, 457, 478, 804, 1040, 1070
MfeI	CAATTG	1 cut(s)	650
MflI	RGATCY	2 cut(s)	517, 832
MhlI	GDGCHC	3 cut(s)	168, 685, 976
MluCI	AATT	7 cut(s)	436, 502, 544, 650, 842, 1141, 1520
MmeI	TCCRAC	2 cut(s)	325, 643
MnlI	CCTC	9 cut(s)	107, 115, 341, 350, 1016, 1078, 1269, 1418, 1450
MroXI	GAANNNNTTC	1 cut(s)	1437
MseI	TTAA	3 cut(s)	219, 500, 1523
MslI	CAYNNNNRTG	1 cut(s)	780
MspA1I	CMGCKG	2 cut(s)	1378, 1517
MspCI	CTTAAG	1 cut(s)	218
MspI	CCGG	5 cut(s)	92, 328, 1174, 1390, 1485
MspR9I	CCNGG	8 cut(s)	9, 93, 329, 747, 1220, 1263, 1391, 1485
MunI	CAATTG	1 cut(s)	650
Mva1269I	GAATGC	1 cut(s)	566
MvaI	CCWGG	4 cut(s)	9, 747, 1220, 1263
MvnI	CGCG	1 cut(s)	20
MwoI	GCNNNNNNNGC	2 cut(s)	209, 993
NciI	CCSGG	4 cut(s)	93, 329, 1391, 1485
NdeII	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
NlaIV	GGNNCC	9 cut(s)	167, 326, 519, 744, 1183, 1217, 1242, 1270, 1330
NmuCI	GTSAC	4 cut(s)	193, 636, 752, 1088
NspI	RCATGY	1 cut(s)	1354
NspV	TTCGAA	2 cut(s)	413, 434
PaeI	GCATGC	1 cut(s)	1354
PagI	TCATGA	1 cut(s)	592
PasI	CCCWGGG	1 cut(s)	8
PcsI	WCGNNNNNNNCGW	2 cut(s)	24, 777
PctI	GAATGC	1 cut(s)	566
PdmI	GAANNNNTTC	1 cut(s)	1437
PfeI	GAWTC	4 cut(s)	787, 809, 1121, 1433
Pfl23II	CGTACG	1 cut(s)	283
PflFI	GACNNNGTC	1 cut(s)	70
PinAI	ACCGGT	1 cut(s)	1173
PkrI	GCNGC	3 cut(s)	295, 298, 1338
Ppu21I	YACGTR	1 cut(s)	917
PpuMI	RGGWCCY	1 cut(s)	1216
PsiI	TTATAA	1 cut(s)	693
Psp5II	RGGWCCY	1 cut(s)	1216
Psp6I	CCWGG	4 cut(s)	7, 745, 1218, 1261
PspGI	CCWGG	4 cut(s)	7, 745, 1218, 1261
PspLI	CGTACG	1 cut(s)	283
PspN4I	GGNNCC	9 cut(s)	167, 326, 519, 744, 1183, 1217, 1242, 1270, 1330
PspPI	GGNCC	2 cut(s)	94, 1216
PspPPI	RGGWCCY	1 cut(s)	1216
PstI	CTGCAG	3 cut(s)	298, 1338, 1454
PsuI	RGATCY	2 cut(s)	517, 832
PsyI	GACNNNGTC	1 cut(s)	70
PvuII	CAGCTG	1 cut(s)	1517
RsaI	GTAC	7 cut(s)	131, 285, 727, 1172, 1330, 1395, 1528
RsaNI	GTAC	7 cut(s)	130, 284, 726, 1171, 1329, 1394, 1527
RseI	CAYNNNNRTG	1 cut(s)	780
SaqAI	TTAA	3 cut(s)	219, 500, 1523
SatI	GCNGC	3 cut(s)	294, 297, 1337
Sau3AI	GATC	7 cut(s)	36, 462, 483, 517, 571, 832, 1060
Sau96I	GGNCC	2 cut(s)	94, 1216
ScrFI	CCNGG	8 cut(s)	9, 93, 329, 747, 1220, 1263, 1391, 1485
SduI	GDGCHC	3 cut(s)	168, 685, 976
SfaNI	GCATC	4 cut(s)	48, 163, 469, 1244
SfcI	CTRYAG	3 cut(s)	294, 1334, 1450
SfuI	TTCGAA	2 cut(s)	413, 434
SinI	GGWCC	1 cut(s)	1216
SmiI	ATTTAAAT	1 cut(s)	501
SmiMI	CAYNNNNRTG	1 cut(s)	780
SmlI	CTYRAG	3 cut(s)	98, 218, 507
SmoI	CTYRAG	3 cut(s)	98, 218, 507
SpeI	ACTAGT	1 cut(s)	728
SphI	GCATGC	1 cut(s)	1354
Sse9I	AATT	7 cut(s)	436, 502, 544, 650, 842, 1141, 1520
SsiI	CCGC	3 cut(s)	20, 951, 1376
SspMI	CTAG	3 cut(s)	75, 209, 729
StyD4I	CCNGG	8 cut(s)	7, 91, 327, 745, 1218, 1261, 1389, 1483
StyI	CCWWGG	1 cut(s)	904
SwaI	ATTTAAAT	1 cut(s)	501
TaaI	ACNGT	7 cut(s)	53, 193, 303, 758, 1165, 1203, 1447
TaiI	ACGT	3 cut(s)	289, 865, 919
TaqI	TCGA	4 cut(s)	413, 434, 570, 1574
TaqII	GACCGA	1 cut(s)	1178
TasI	AATT	7 cut(s)	436, 502, 544, 650, 842, 1141, 1520
TatI	WGTACW	2 cut(s)	129, 725
TfiI	GAWTC	4 cut(s)	787, 809, 1121, 1433
Tru1I	TTAA	3 cut(s)	219, 500, 1523
Tru9I	TTAA	3 cut(s)	219, 500, 1523
TseFI	GTSAC	4 cut(s)	193, 636, 752, 1088
TseI	GCWGC	3 cut(s)	293, 296, 1336
Tsp45I	GTSAC	4 cut(s)	193, 636, 752, 1088
TspDTI	ATGAA	4 cut(s)	478, 804, 1113, 1122
TspGWI	ACGGA	2 cut(s)	1174, 1426
Tth111I	GACNNNGTC	1 cut(s)	70
Vha464I	CTTAAG	1 cut(s)	218
VpaK11BI	GGWCC	1 cut(s)	1216
XapI	RAATTY	3 cut(s)	436, 502, 1141
XceI	RCATGY	1 cut(s)	1354
XcmI	CCANNNNNNNNNTGG	1 cut(s)	888
XmiI	GTMKAC	1 cut(s)	627
XmnI	GAANNNNTTC	1 cut(s)	1437
XspI	CTAG	3 cut(s)	75, 209, 729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.