pycom12g16330

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
18698903 .. 18700762
1860 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 975 bp
ATGGAAGAAAACCAAAATGAAAACCCCAATCCTACGAGCCCCCCGCCACCGCCGCCGCCACCCAAGAAGCCGCCAATTCCGCCGTACGTGAAGGCCCTGTCGGGTTCGCTCGGCGGCATCATGGAGGCCGCGTGCCTACAGCCCATCGATGTCATCAAGACCCGGCTCCAGCTCGACCGGACCGGCACCTGCAAGGGAATTATCCACTGCGGCGCCACCGTTGCCCGCACCGAGGGAGTCCGGGCTCTCTGGAAGGGCCTGACCCCCTTCGCCACCCACCTGACCTTGAAGTACGCGCTTCGGATGGGCTCCAACGCCGTGCTGCAGGGCGCGTTTAAGGACGCGGAGACCGGGAAGGTCAGCAACCACGGCCGGCTCATTTCTGGGTTCGGAGCTGGAGTTCTCGAAGCCCTCGTCATTGTCACGCCGTTTGAGGTGGTGAAAATTAGACTACAGCAACAGAAAGGATTGAGTCCCGGGCTTCTGAAGTATAAGGGTCCTATTCACTGTGCTCGTACGATCATTCAGGAGGAAGGTATCCGTGGGCTTTGGTCAGGAGCTGCTCCAACTGTTATGCGCAATGGGACGAACCAGGCTGCCATGTTTACAGCCAAAAATGCGTTCGACGTTCTCTTGTGGAAGAAACATGAAGGAGATGGGAGAGTCCTGCTGCCATGGCAGTCTATGATATCTGGTTTCCTTGCAGGCACAGCCGGCCCCATTTGCACGGGTCCCTTTGATGTTGTGAAAACGAGGCTGATGGCTCAGAGCCGAGGTGTTGATGGCAAGATGAAATACAAGGGCATGATTCATGCGATCAGGACAATATACGCAGAGGAAGGGCTTCTGGCTTTGTGGAAAGGACTCCTGCCTCGGCTCATGAGGATACCTCCCGGGCAAGCCATTATGTGGACTGTGGCTGACCAAGTGATAGGATTGTATGAGAAACGATATCTTCGTAATGCACGCTTGTAG

Protein Analysis

325

Amino Acids

35.23

Weight (kDa)

9.93

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 27 - 112 5.6e-17 Mitochondrial carrier protein
Mito_carr PF00153 121 - 215 1.6e-20 Mitochondrial carrier protein
Mito_carr PF00153 225 - 315 9.5e-24 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012809)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 197
Acc16I TGCGCA 1 cut(s) 578
Acc36I ACCTGC 1 cut(s) 197
AccB1I GGYRCC 2 cut(s) 185, 212
AccB7I CCANNNNNTGG 1 cut(s) 909
AccII CGCG 4 cut(s) 131, 296, 332, 344
AcoI YGGCCR 1 cut(s) 370
AcuI CTGAAG 1 cut(s) 506
AcyI GRCGYC 1 cut(s) 213
AfaI GTAC 3 cut(s) 86, 293, 517
AfiI CCNNNNNNNGG 2 cut(s) 232, 909
AgsI TTSAA 1 cut(s) 289
AjnI CCWGG 1 cut(s) 591
AjuI GAANNNNNNNTTGG 2 cut(s) 605, 637
AloI GAACNNNNNNTCC 2 cut(s) 384, 416
AluBI AGCT 3 cut(s) 172, 395, 560
AluI AGCT 3 cut(s) 172, 395, 560
Alw21I GWGCWC 1 cut(s) 514
Alw26I GTCTC 1 cut(s) 341
AlwNI CAGNNNCTG 1 cut(s) 560
Ama87I CYCGRG 2 cut(s) 476, 893
AoxI GGCC 5 cut(s) 93, 126, 256, 370, 715
ApeKI GCWGC 4 cut(s) 322, 560, 596, 670
ArsI GACNNNNNNTTYG 2 cut(s) 399, 431
Asp700I GAANNNNTTC 1 cut(s) 843
AspLEI GCGC 4 cut(s) 215, 298, 332, 579
AspS9I GGNCC 6 cut(s) 94, 180, 256, 497, 716, 731
AsuC2I CCSGG 7 cut(s) 163, 242, 352, 477, 478, 894, 895
AsuHPI GGTGA 1 cut(s) 451
AvaI CYCGRG 2 cut(s) 476, 893
AvaII GGWCC 3 cut(s) 180, 497, 731
BanI GGYRCC 2 cut(s) 185, 212
BanII GRGCYC 3 cut(s) 41, 247, 311
Bbv12I GWGCWC 1 cut(s) 514
BbvI GCAGC 4 cut(s) 309, 547, 583, 657
BccI CCATC 5 cut(s) 152, 298, 650, 754, 776
BceAI ACGGC 4 cut(s) 67, 302, 385, 412
BciT130I CCWGG 1 cut(s) 593
BciVI GTATCC 2 cut(s) 548, 879
BcnI CCSGG 7 cut(s) 163, 242, 352, 477, 478, 894, 895
BcoDI GTCTC 1 cut(s) 341
BfmI CTRYAG 3 cut(s) 137, 323, 452
BfoI RGCGCY 1 cut(s) 216
BfuAI ACCTGC 1 cut(s) 197
BfuI GTATCC 2 cut(s) 548, 879
Bme1390I CCNGG 8 cut(s) 163, 242, 352, 477, 478, 593, 894, 895
Bme18I GGWCC 3 cut(s) 180, 497, 731
BmeT110I CYCGRG 2 cut(s) 476, 893
BmgT120I GGNCC 6 cut(s) 94, 180, 256, 497, 716, 731
BmiI GGNNCC 8 cut(s) 167, 187, 214, 310, 498, 718, 732, 733
BmrFI CCNGG 8 cut(s) 163, 242, 352, 477, 478, 593, 894, 895
BmsI GCATC 1 cut(s) 126
BplI GAGNNNNNCTC 2 cut(s) 874, 906
BpmI CTGGAG 2 cut(s) 152, 417
BpuMI CCSGG 7 cut(s) 163, 242, 352, 477, 478, 894, 895
Bsa29I ATCGAT 1 cut(s) 147
BsaAI YACGTR 1 cut(s) 88
BsaHI GRCGYC 1 cut(s) 213
BsaI GGTCTC 1 cut(s) 341
BsaJI CCNNGG 8 cut(s) 231, 367, 476, 541, 674, 772, 872, 893
BsaWI WCCGGW 1 cut(s) 177
BsaXI ACNNNNNCTCC 4 cut(s) 116, 146, 384, 414
Bsc4I CCNNNNNNNGG 2 cut(s) 232, 909
Bse118I RCCGGY 3 cut(s) 182, 372, 713
Bse3DI GCAATG 1 cut(s) 586
BseBI CCWGG 1 cut(s) 593
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 8 cut(s) 231, 367, 476, 541, 674, 772, 872, 893
BseGI GGATG 1 cut(s) 309
BseLI CCNNNNNNNGG 2 cut(s) 232, 909
BseMI GCAATG 1 cut(s) 586
BseMII CTCAG 1 cut(s) 779
BseX3I CGGCCG 1 cut(s) 370
BseXI GCAGC 4 cut(s) 309, 547, 583, 657
Bsh1236I CGCG 4 cut(s) 131, 296, 332, 344
Bsh1285I CGRYCG 2 cut(s) 178, 373
BshFI GGCC 5 cut(s) 95, 128, 258, 372, 717
BshNI GGYRCC 2 cut(s) 185, 212
BshVI ATCGAT 1 cut(s) 147
BsiEI CGRYCG 2 cut(s) 178, 373
BsiHKAI GWGCWC 1 cut(s) 514
BsiHKCI CYCGRG 2 cut(s) 476, 893
BsiSI CCGG 9 cut(s) 163, 178, 183, 241, 351, 373, 477, 714, 894
BsiWI CGTACG 2 cut(s) 84, 515
BslFI GGGAC 3 cut(s) 459, 598, 717
BslI CCNNNNNNNGG 2 cut(s) 232, 909
BsmAI GTCTC 1 cut(s) 341
BsmFI GGGAC 3 cut(s) 459, 598, 717
BsnI GGCC 5 cut(s) 95, 128, 258, 372, 717
Bso31I GGTCTC 1 cut(s) 341
BsoBI CYCGRG 2 cut(s) 476, 893
Bsp1286I GDGCHC 4 cut(s) 41, 247, 311, 514
Bsp143I GATC 2 cut(s) 519, 816
Bsp19I CCATGG 1 cut(s) 674
BspANI GGCC 5 cut(s) 95, 128, 258, 372, 717
BspCNI CTCAG 1 cut(s) 778
BspDI ATCGAT 1 cut(s) 147
BspFNI CGCG 4 cut(s) 131, 296, 332, 344
BspHI TCATGA 1 cut(s) 879
BspLI GGNNCC 8 cut(s) 167, 187, 214, 310, 498, 718, 732, 733
BspMAI CTGCAG 1 cut(s) 327
BspMI ACCTGC 1 cut(s) 197
BspT107I GGYRCC 2 cut(s) 185, 212
BspTNI GGTCTC 1 cut(s) 341
BsrDI GCAATG 1 cut(s) 586
BsrFI RCCGGY 3 cut(s) 182, 372, 713
BssAI RCCGGY 3 cut(s) 182, 372, 713
BssECI CCNNGG 8 cut(s) 231, 367, 476, 541, 674, 772, 872, 893
BssMI GATC 2 cut(s) 519, 816
BssNI GRCGYC 1 cut(s) 213
BssT1I CCWWGG 1 cut(s) 674
Bst2UI CCWGG 1 cut(s) 593
Bst4CI ACNGT 4 cut(s) 220, 509, 571, 916
BstACI GRCGYC 1 cut(s) 213
BstBAI YACGTR 1 cut(s) 88
BstC8I GCNNGC 7 cut(s) 133, 226, 374, 706, 715, 900, 967
BstDEI CTNAG 1 cut(s) 765
BstDSI CCRYGG 3 cut(s) 367, 541, 674
BstF5I GGATG 1 cut(s) 309
BstFNI CGCG 4 cut(s) 131, 296, 332, 344
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 4 cut(s) 215, 298, 332, 579
BstKTI GATC 2 cut(s) 522, 819
BstMAI GTCTC 1 cut(s) 341
BstMBI GATC 2 cut(s) 519, 816
BstMCI CGRYCG 2 cut(s) 178, 373
BstMWI GCNNNNNNNGC 9 cut(s) 52, 79, 221, 369, 617, 676, 710, 714, 723
BstNI CCWGG 1 cut(s) 593
BstSCI CCNGG 8 cut(s) 161, 240, 350, 475, 476, 591, 892, 893
BstSFI CTRYAG 3 cut(s) 137, 323, 452
BstUI CGCG 4 cut(s) 131, 296, 332, 344
BstV1I GCAGC 4 cut(s) 309, 547, 583, 657
BstZI CGGCCG 1 cut(s) 370
Bsu15I ATCGAT 1 cut(s) 147
BsuI GTATCC 2 cut(s) 548, 879
BsuRI GGCC 5 cut(s) 95, 128, 258, 372, 717
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 3 cut(s) 367, 541, 674
BtsCI GGATG 1 cut(s) 309
BtsI GCAGTG 1 cut(s) 205
BtsIMutI CAGTG 2 cut(s) 205, 505
BveI ACCTGC 1 cut(s) 197
Cac8I GCNNGC 7 cut(s) 133, 226, 374, 706, 715, 900, 967
CaiI CAGNNNCTG 1 cut(s) 560
CciI TCATGA 1 cut(s) 879
CfoI GCGC 4 cut(s) 215, 298, 332, 579
Cfr10I RCCGGY 3 cut(s) 182, 372, 713
Cfr13I GGNCC 6 cut(s) 94, 180, 256, 497, 716, 731
Cfr9I CCCGGG 2 cut(s) 476, 893
ClaI ATCGAT 1 cut(s) 147
CpoI CGGWCCG 1 cut(s) 180
CseI GACGC 1 cut(s) 350
Csp6I GTAC 3 cut(s) 85, 292, 516
CspI CGGWCCG 1 cut(s) 180
CviAII CATG 7 cut(s) 121, 601, 647, 675, 805, 812, 880
CviQI GTAC 3 cut(s) 85, 292, 516
DdeI CTNAG 1 cut(s) 765
DinI GGCGCC 1 cut(s) 214
DpnI GATC 2 cut(s) 521, 818
DpnII GATC 2 cut(s) 519, 816
EaeI YGGCCR 1 cut(s) 370
EagI CGGCCG 1 cut(s) 370
EciI GGCGGA 1 cut(s) 69
EclXI CGGCCG 1 cut(s) 370
Eco130I CCWWGG 1 cut(s) 674
Eco24I GRGCYC 3 cut(s) 41, 247, 311
Eco31I GGTCTC 1 cut(s) 341
Eco32I GATATC 2 cut(s) 690, 953
Eco47I GGWCC 3 cut(s) 180, 497, 731
Eco52I CGGCCG 1 cut(s) 370
Eco57I CTGAAG 1 cut(s) 506
Eco88I CYCGRG 2 cut(s) 476, 893
EcoO109I RGGNCCY 4 cut(s) 94, 256, 497, 731
EcoRII CCWGG 1 cut(s) 591
EcoRV GATATC 2 cut(s) 690, 953
EcoT14I CCWWGG 1 cut(s) 674
EcoT38I GRGCYC 3 cut(s) 41, 247, 311
EgeI GGCGCC 1 cut(s) 214
EheI GGCGCC 1 cut(s) 214
ErhI CCWWGG 1 cut(s) 674
FaeI CATG 7 cut(s) 124, 604, 650, 678, 808, 815, 883
FaqI GGGAC 3 cut(s) 459, 598, 717
FatI CATG 7 cut(s) 120, 600, 646, 674, 804, 811, 879
FauI CCCGC 2 cut(s) 51, 233
FokI GGATG 1 cut(s) 316
FriOI GRGCYC 3 cut(s) 41, 247, 311
FspI TGCGCA 1 cut(s) 578
GlaI GCGC 4 cut(s) 214, 297, 331, 578
GsuI CTGGAG 2 cut(s) 152, 417
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 5 cut(s) 95, 128, 258, 372, 717
HapII CCGG 9 cut(s) 163, 178, 183, 241, 351, 373, 477, 714, 894
HgaI GACGC 1 cut(s) 350
HhaI GCGC 4 cut(s) 215, 298, 332, 579
Hin1I GRCGYC 1 cut(s) 213
Hin1II CATG 7 cut(s) 124, 604, 650, 678, 808, 815, 883
Hin6I GCGC 4 cut(s) 213, 296, 330, 577
HinP1I GCGC 4 cut(s) 213, 296, 330, 577
HinfI GANTC 5 cut(s) 237, 472, 663, 808, 864
HpaII CCGG 9 cut(s) 163, 178, 183, 241, 351, 373, 477, 714, 894
HphI GGTGA 1 cut(s) 451
Hpy166II GTNNAC 2 cut(s) 606, 912
Hpy188I TCNGA 4 cut(s) 303, 392, 486, 768
Hpy188III TCNNGA 7 cut(s) 157, 250, 404, 527, 555, 820, 880
Hpy8I GTNNAC 2 cut(s) 606, 912
Hpy99I CGWCG 1 cut(s) 629
HpyAV CCTTC 7 cut(s) 85, 247, 277, 349, 527, 644, 833
HpyCH4III ACNGT 4 cut(s) 220, 509, 571, 916
HpyCH4IV ACGT 2 cut(s) 87, 627
HpyCH4V TGCA 5 cut(s) 192, 325, 704, 726, 965
HpyF10VI GCNNNNNNNGC 9 cut(s) 52, 79, 221, 369, 617, 676, 710, 714, 723
HpyF3I CTNAG 1 cut(s) 765
HpySE526I ACGT 2 cut(s) 87, 627
Hsp92I GRCGYC 1 cut(s) 213
Hsp92II CATG 7 cut(s) 124, 604, 650, 678, 808, 815, 883
HspAI GCGC 4 cut(s) 213, 296, 330, 577
KasI GGCGCC 1 cut(s) 212
KflI GGGWCCC 1 cut(s) 731
KroI GCCGGC 2 cut(s) 372, 713
KroNI GCCGGC 2 cut(s) 374, 715
Kzo9I GATC 2 cut(s) 519, 816
LmnI GCTCC 5 cut(s) 171, 314, 392, 557, 568
Lsp1109I GCAGC 4 cut(s) 309, 547, 583, 657
LweI GCATC 1 cut(s) 126
MaeII ACGT 2 cut(s) 87, 627
MaeIII GTNAC 1 cut(s) 421
MalI GATC 2 cut(s) 521, 818
MboI GATC 2 cut(s) 519, 816
MboII GAAGA 3 cut(s) 17, 652, 947
MhlI GDGCHC 4 cut(s) 41, 247, 311, 514
MluCI AATT 3 cut(s) 75, 198, 444
Mly113I GGCGCC 1 cut(s) 213
MlyI GAGTC 4 cut(s) 246, 481, 672, 858
MmeI TCCRAC 2 cut(s) 336, 590
MroNI GCCGGC 2 cut(s) 372, 713
MroXI GAANNNNTTC 1 cut(s) 843
MseI TTAA 1 cut(s) 336
MspI CCGG 9 cut(s) 163, 178, 183, 241, 351, 373, 477, 714, 894
MspR9I CCNGG 8 cut(s) 163, 242, 352, 477, 478, 593, 894, 895
MvaI CCWGG 1 cut(s) 593
MvnI CGCG 4 cut(s) 131, 296, 332, 344
MwoI GCNNNNNNNGC 9 cut(s) 52, 79, 221, 369, 617, 676, 710, 714, 723
NaeI GCCGGC 2 cut(s) 374, 715
NarI GGCGCC 1 cut(s) 213
NciI CCSGG 7 cut(s) 163, 242, 352, 477, 478, 894, 895
NcoI CCATGG 1 cut(s) 674
NdeII GATC 2 cut(s) 519, 816
NgoMIV GCCGGC 2 cut(s) 372, 713
NlaIII CATG 7 cut(s) 124, 604, 650, 678, 808, 815, 883
NlaIV GGNNCC 8 cut(s) 167, 187, 214, 310, 498, 718, 732, 733
NmeAIII GCCGAG 3 cut(s) 90, 797, 853
NmuCI GTSAC 1 cut(s) 421
NsbI TGCGCA 1 cut(s) 578
PagI TCATGA 1 cut(s) 879
PaqCI CACCTGC 1 cut(s) 197
PcsI WCGNNNNNNNCGW 2 cut(s) 411, 955
PdiI GCCGGC 2 cut(s) 374, 715
PdmI GAANNNNTTC 1 cut(s) 843
PfeI GAWTC 1 cut(s) 808
Pfl23II CGTACG 2 cut(s) 84, 515
PflMI CCANNNNNTGG 1 cut(s) 909
PleI GAGTC 4 cut(s) 245, 480, 671, 858
PluTI GGCGCC 1 cut(s) 216
PpsI GAGTC 4 cut(s) 245, 480, 671, 858
Ppu21I YACGTR 1 cut(s) 88
PpuMI RGGWCCY 2 cut(s) 497, 731
Psp5II RGGWCCY 2 cut(s) 497, 731
Psp6I CCWGG 1 cut(s) 591
PspGI CCWGG 1 cut(s) 591
PspLI CGTACG 2 cut(s) 84, 515
PspN4I GGNNCC 8 cut(s) 167, 187, 214, 310, 498, 718, 732, 733
PspPI GGNCC 6 cut(s) 94, 180, 256, 497, 716, 731
PspPPI RGGWCCY 2 cut(s) 497, 731
PstI CTGCAG 1 cut(s) 327
PstNI CAGNNNCTG 1 cut(s) 560
RsaI GTAC 3 cut(s) 86, 293, 517
RsaNI GTAC 3 cut(s) 85, 292, 516
Rsr2I CGGWCCG 1 cut(s) 180
RsrII CGGWCCG 1 cut(s) 180
SaqAI TTAA 1 cut(s) 336
Sau3AI GATC 2 cut(s) 519, 816
Sau96I GGNCC 6 cut(s) 94, 180, 256, 497, 716, 731
SchI GAGTC 4 cut(s) 246, 481, 672, 858
ScrFI CCNGG 8 cut(s) 163, 242, 352, 477, 478, 593, 894, 895
SduI GDGCHC 4 cut(s) 41, 247, 311, 514
SfaNI GCATC 1 cut(s) 126
SfcI CTRYAG 3 cut(s) 137, 323, 452
SfoI GGCGCC 1 cut(s) 214
SinI GGWCC 3 cut(s) 180, 497, 731
SmaI CCCGGG 2 cut(s) 478, 895
Sse9I AATT 3 cut(s) 75, 198, 444
SspDI GGCGCC 1 cut(s) 212
StyD4I CCNGG 8 cut(s) 161, 240, 350, 475, 476, 591, 892, 893
StyI CCWWGG 1 cut(s) 674
TaaI ACNGT 4 cut(s) 220, 509, 571, 916
TaiI ACGT 2 cut(s) 90, 630
TaqI TCGA 4 cut(s) 147, 174, 405, 624
TasI AATT 3 cut(s) 75, 198, 444
TauI GCSGC 6 cut(s) 55, 58, 73, 117, 131, 213
TfiI GAWTC 1 cut(s) 808
Tru1I TTAA 1 cut(s) 336
Tru9I TTAA 1 cut(s) 336
TscAI CASTG 2 cut(s) 212, 512
TseFI GTSAC 1 cut(s) 421
TseI GCWGC 4 cut(s) 322, 560, 596, 670
Tsp45I GTSAC 1 cut(s) 421
TspDTI ATGAA 4 cut(s) 33, 663, 800, 806
TspGWI ACGGA 1 cut(s) 530
TspMI CCCGGG 2 cut(s) 476, 893
TspRI CASTG 2 cut(s) 212, 512
Van91I CCANNNNNTGG 1 cut(s) 909
VpaK11BI GGWCC 3 cut(s) 180, 497, 731
XmaI CCCGGG 2 cut(s) 476, 893
XmnI GAANNNNTTC 1 cut(s) 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.