Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002882.1

Orthogroup ID

OG0012809

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 4287

Gene Structure 4287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002882.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1352 bp

atggagaaaacccagagcgattcccctaacggcgttaagaaccccatcccgccgtacgtcaaggccctatcgggctcgctgggcgggattgtggaggcctcgtgtctccagcccattgacgtcatcaagacgcggctgcagctcgaccggaccgggggctacaggggaattatccactgcggcaccacggttgcgcgcacggaaggcgtccgggctttgtggaagggattgaccccgtttgcgacgcatcttactttgaagtacgcgctgaggatgggatccaatgccgtgcttcaaggggcgtttaaggacgcccagaccgggaaggtcagcaatcacggccggttcatttccgggtttggtgccggagttctcgaggctcttgttattgtcactcctttcgaggtagtaaaaattagactgcagcaacagagaggattgagtcatgaacttctgaagtataagggtccagtacactgtgctcgtacaatcatccgggaggaaggccttcgtgggctctggtcgggggcttctccaactgttatgcgcaatgggacaaaccaggcggccatgttttcagccaaaaatgcttttgatgttctcctgtggaagaaacatgaaggagatgggagagtcctgctgccatggcagtctatgatatcaggtttcctcgcaggaacagcaggtcccatttgcaccggtccctttgatgttgtcaaaacaaggctcatggctcagggcagaggggttggcgagttgaaatacaaaggccttttccatgccatcaggacaatatatgcagaggaagggcttcttgccttgtggaaaggactgctgccacggctcatgaggataccacccgggcaagccatcatgtggggtgtggctgaccaagtaataggattgtatgagaaacaatatcttccccttgcccccttctccaacactcgcctccacagtctcgtctctcccaaattttcttctaaccaggtttcagaatccggtttccgaagctttgaaacgatgtcgtccgacgacgagagggaggagaaggagttggatctcacctctccagaagtggtcaccaaatacaagagtgccgcagagattgtgaacaaggctttgcagcgagtgatatcggaatgcaagccgaaagctaagattgtggacgtttgcgagataggtgattcatacatcagagagcaaactggtaacatgtacaaaaatgtgaagaagaagattgaacgaggtgttgctttcccaacttccatttctgtgaacaacactgtatgccatttctctccacttgccagtgatgaatcagtgctcgaagaaggggatattgtaaagat

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006839 GO:0006855 GO:0008150 GO:0008509 GO:0008514 GO:0015075 GO:0015141 GO:0015238 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015741 GO:0015744 GO:0015849 GO:0015893 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071422 GO:0071702 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

450

Amino Acids

49.32

Weight (kDa)

9.36

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01340
fragaria_vesca	FvH4_6g11130
malus_domestica	MD00G1062100.v1.1 MD12G1172100.v1.1
prunus_persica	Prupe.6G280400_v2.0.a1
pyrus_communis	pycom04g14300 pycom12g16330
rosa_chinensis	RchiOBHm_Chr3g0462571
rosa_laevigata	RLG00000024847
rosa_multiflora	Rmu_sc0002882.1_g000001 Rmu_sc0003624.1_g000023
rosa_roxburghii	Rroxscaffold_6G00417380
rosa_rugosa	Rorug03G0057600
rosa_samantha	Rh3AG115700 Rh3BG119200 Rh3CG122600 Rh3DG121300
rosa_wichuraiana	Rw3G009810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	123
Acc16I	TGCGCA	1 cut(s)	548
Acc36I	ACCTGC	1 cut(s)	674
AccB1I	GGYRCC	2 cut(s)	182, 362
AccB7I	CCANNNNNTGG	1 cut(s)	876
AccII	CGCG	3 cut(s)	133, 196, 266
AciI	CCGC	6 cut(s)	50, 84, 133, 180, 566, 1101
AclWI	GGATC	3 cut(s)	273, 286, 1068
AcoI	YGGCCR	2 cut(s)	340, 567
AcsI	RAATTY	1 cut(s)	974
AcuI	CTGAAG	1 cut(s)	476
AcyI	GRCGYC	3 cut(s)	120, 207, 312
AfaI	GTAC	5 cut(s)	56, 263, 474, 487, 1220
AfiI	CCNNNNNNNGG	3 cut(s)	154, 321, 876
AflIII	ACRYGT	1 cut(s)	1215
AgeI	ACCGGT	1 cut(s)	698
AgsI	TTSAA	5 cut(s)	259, 296, 760, 1019, 1244
AjnI	CCWGG	2 cut(s)	561, 987
AjuI	GAANNNNNNNTTGG	2 cut(s)	1255, 1287
AloI	GAACNNNNNNTCC	2 cut(s)	670, 702
AluBI	AGCT	3 cut(s)	142, 1014, 1157
AluI	AGCT	3 cut(s)	142, 1014, 1157
Alw21I	GWGCWC	2 cut(s)	484, 1329
Alw26I	GTCTC	3 cut(s)	110, 965, 970
AlwI	GGATC	3 cut(s)	273, 286, 1068
Ama87I	CYCGRG	2 cut(s)	374, 860
AoxI	GGCC	6 cut(s)	63, 96, 340, 505, 567, 769
ApeKI	GCWGC	6 cut(s)	136, 139, 424, 640, 835, 1126
ApoI	RAATTY	1 cut(s)	974
AsiGI	ACCGGT	1 cut(s)	698
Asp700I	GAANNNNTTC	2 cut(s)	507, 810
AspLEI	GCGC	4 cut(s)	196, 198, 268, 549
AspS9I	GGNCC	5 cut(s)	64, 150, 467, 686, 701
AsuC2I	CCSGG	7 cut(s)	154, 212, 322, 355, 497, 861, 862
AsuHPI	GGTGA	3 cut(s)	1057, 1075, 1196
AvaI	CYCGRG	2 cut(s)	374, 860
AvaII	GGWCC	4 cut(s)	150, 467, 686, 701
BamHI	GGATCC	1 cut(s)	278
BanI	GGYRCC	2 cut(s)	182, 362
BanII	GRGCYC	2 cut(s)	77, 519
BauI	CACGAG	1 cut(s)	100
Bbv12I	GWGCWC	2 cut(s)	484, 1329
BbvCI	CCTCAGC	1 cut(s)	269
BbvI	GCAGC	6 cut(s)	123, 151, 436, 627, 822, 1138
BccI	CCATC	5 cut(s)	53, 268, 620, 791, 878
BceAI	ACGGC	5 cut(s)	37, 46, 272, 355, 857
BciT130I	CCWGG	2 cut(s)	563, 989
BciVI	GTATCC	1 cut(s)	846
BcnI	CCSGG	7 cut(s)	154, 212, 322, 355, 497, 861, 862
BcoDI	GTCTC	3 cut(s)	110, 965, 970
BfmI	CTRYAG	3 cut(s)	137, 160, 422
BfuAI	ACCTGC	1 cut(s)	674
BfuI	GTATCC	1 cut(s)	846
Bme1390I	CCNGG	9 cut(s)	154, 212, 322, 355, 497, 563, 861, 862, 989
Bme18I	GGWCC	4 cut(s)	150, 467, 686, 701
BmeT110I	CYCGRG	2 cut(s)	374, 860
BmgT120I	GGNCC	5 cut(s)	64, 150, 467, 686, 701
BmiI	GGNNCC	6 cut(s)	184, 280, 364, 468, 688, 703
BmrFI	CCNGG	9 cut(s)	154, 212, 322, 355, 497, 563, 861, 862, 989
BmsI	GCATC	1 cut(s)	256
BpmI	CTGGAG	2 cut(s)	92, 1056
Bpu10I	CCTNAGC	2 cut(s)	269, 735
BpuMI	CCSGG	7 cut(s)	154, 212, 322, 355, 497, 861, 862
BsaHI	GRCGYC	3 cut(s)	120, 207, 312
BsaJI	CCNNGG	5 cut(s)	153, 186, 644, 839, 860
BsaWI	WCCGGW	3 cut(s)	147, 698, 1001
BsaXI	ACNNNNNCTCC	4 cut(s)	86, 116, 1040, 1070
Bsc4I	CCNNNNNNNGG	3 cut(s)	154, 321, 876
Bse118I	RCCGGY	2 cut(s)	342, 698
Bse1I	ACTGG	3 cut(s)	470, 1213, 1311
Bse3DI	GCAATG	1 cut(s)	556
BseBI	CCWGG	2 cut(s)	563, 989
BseDI	CCNNGG	5 cut(s)	153, 186, 644, 839, 860
BseGI	GGATG	3 cut(s)	45, 279, 492
BseLI	CCNNNNNNNGG	3 cut(s)	154, 321, 876
BseMI	GCAATG	1 cut(s)	556
BseMII	CTCAG	2 cut(s)	260, 749
BseNI	ACTGG	3 cut(s)	470, 1213, 1311
BsePI	GCGCGC	1 cut(s)	194
BseRI	GAGGAG	1 cut(s)	1061
BseX3I	CGGCCG	1 cut(s)	340
BseXI	GCAGC	6 cut(s)	123, 151, 436, 627, 822, 1138
BseYI	CCCAGC	1 cut(s)	79
Bsh1236I	CGCG	3 cut(s)	133, 196, 266
Bsh1285I	CGRYCG	2 cut(s)	148, 343
BshFI	GGCC	6 cut(s)	65, 98, 342, 507, 569, 771
BshNI	GGYRCC	2 cut(s)	182, 362
BshTI	ACCGGT	1 cut(s)	698
BsiEI	CGRYCG	2 cut(s)	148, 343
BsiHKAI	GWGCWC	2 cut(s)	484, 1329
BsiHKCI	CYCGRG	2 cut(s)	374, 860
BsiWI	CGTACG	1 cut(s)	54
BslFI	GGGAC	3 cut(s)	568, 672, 687
BslI	CCNNNNNNNGG	3 cut(s)	154, 321, 876
BsmAI	GTCTC	3 cut(s)	110, 965, 970
BsmBI	CGTCTC	1 cut(s)	970
BsmFI	GGGAC	3 cut(s)	568, 672, 687
BsmI	GAATGC	1 cut(s)	1148
BsnI	GGCC	6 cut(s)	65, 98, 342, 507, 569, 771
BsoBI	CYCGRG	2 cut(s)	374, 860
Bsp1286I	GDGCHC	4 cut(s)	77, 484, 519, 1329
Bsp1407I	TGTACA	1 cut(s)	1218
Bsp143I	GATC	2 cut(s)	278, 1060
Bsp19I	CCATGG	1 cut(s)	644
BspACI	CCGC	6 cut(s)	50, 84, 133, 180, 566, 1101
BspANI	GGCC	6 cut(s)	65, 98, 342, 507, 569, 771
BspCNI	CTCAG	2 cut(s)	261, 748
BspFNI	CGCG	3 cut(s)	133, 196, 266
BspHI	TCATGA	2 cut(s)	445, 846
BspLI	GGNNCC	6 cut(s)	184, 280, 364, 468, 688, 703
BspMAI	CTGCAG	2 cut(s)	141, 426
BspMI	ACCTGC	1 cut(s)	674
BspPI	GGATC	3 cut(s)	273, 286, 1068
BspT107I	GGYRCC	2 cut(s)	182, 362
BsrDI	GCAATG	1 cut(s)	556
BsrFI	RCCGGY	2 cut(s)	342, 698
BsrGI	TGTACA	1 cut(s)	1218
BsrI	ACTGG	3 cut(s)	470, 1213, 1311
BssAI	RCCGGY	2 cut(s)	342, 698
BssECI	CCNNGG	5 cut(s)	153, 186, 644, 839, 860
BssHII	GCGCGC	1 cut(s)	194
BssMI	GATC	2 cut(s)	278, 1060
BssNI	GRCGYC	3 cut(s)	120, 207, 312
BssSI	CACGAG	1 cut(s)	100
BssT1I	CCWWGG	1 cut(s)	644
Bst2BI	CACGAG	1 cut(s)	100
Bst2UI	CCWGG	2 cut(s)	563, 989
Bst4CI	ACNGT	5 cut(s)	190, 479, 541, 959, 1288
BstACI	GRCGYC	3 cut(s)	120, 207, 312
BstAUI	TGTACA	1 cut(s)	1218
BstC8I	GCNNGC	4 cut(s)	77, 196, 867, 1148
BstDEI	CTNAG	3 cut(s)	269, 735, 1158
BstDSI	CCRYGG	3 cut(s)	186, 644, 839
BstEII	GGTNACC	1 cut(s)	1081
BstF5I	GGATG	3 cut(s)	45, 279, 492
BstFNI	CGCG	3 cut(s)	133, 196, 266
BstHHI	GCGC	4 cut(s)	196, 198, 268, 549
BstKTI	GATC	2 cut(s)	281, 1063
BstMAI	GTCTC	3 cut(s)	110, 965, 970
BstMBI	GATC	2 cut(s)	278, 1060
BstMCI	CGRYCG	2 cut(s)	148, 343
BstMWI	GCNNNNNNNGC	8 cut(s)	81, 139, 204, 339, 587, 646, 680, 841
BstNI	CCWGG	2 cut(s)	563, 989
BstNSI	RCATGY	1 cut(s)	1219
BstPI	GGTNACC	1 cut(s)	1081
BstSCI	CCNGG	9 cut(s)	152, 210, 320, 353, 495, 561, 859, 860, 987
BstSFI	CTRYAG	3 cut(s)	137, 160, 422
BstUI	CGCG	3 cut(s)	133, 196, 266
BstV1I	GCAGC	6 cut(s)	123, 151, 436, 627, 822, 1138
BstX2I	RGATCY	2 cut(s)	278, 1060
BstYI	RGATCY	2 cut(s)	278, 1060
BstZI	CGGCCG	1 cut(s)	340
BsuI	GTATCC	1 cut(s)	846
BsuRI	GGCC	6 cut(s)	65, 98, 342, 507, 569, 771
BtgI	CCRYGG	3 cut(s)	186, 644, 839
BtsCI	GGATG	3 cut(s)	45, 279, 492
BtsI	GCAGTG	1 cut(s)	175
BtsIMutI	CAGTG	5 cut(s)	175, 475, 1284, 1318, 1329
BveI	ACCTGC	1 cut(s)	674
Cac8I	GCNNGC	4 cut(s)	77, 196, 867, 1148
CciI	TCATGA	2 cut(s)	445, 846
CfoI	GCGC	4 cut(s)	196, 198, 268, 549
Cfr10I	RCCGGY	2 cut(s)	342, 698
Cfr13I	GGNCC	5 cut(s)	64, 150, 467, 686, 701
Cfr9I	CCCGGG	1 cut(s)	860
CpoI	CGGWCCG	1 cut(s)	150
CseI	GACGC	4 cut(s)	139, 196, 253, 320
CsiI	ACCWGGT	1 cut(s)	987
Csp6I	GTAC	5 cut(s)	55, 262, 473, 486, 1219
CspAI	ACCGGT	1 cut(s)	698
CspI	CGGWCCG	1 cut(s)	150
CviAII	CATG	9 cut(s)	446, 571, 617, 645, 730, 779, 847, 874, 1216
CviQI	GTAC	5 cut(s)	55, 262, 473, 486, 1219
DdeI	CTNAG	3 cut(s)	269, 735, 1158
DpnI	GATC	2 cut(s)	280, 1062
DpnII	GATC	2 cut(s)	278, 1060
EaeI	YGGCCR	2 cut(s)	340, 567
EagI	CGGCCG	1 cut(s)	340
EclXI	CGGCCG	1 cut(s)	340
Eco130I	CCWWGG	1 cut(s)	644
Eco147I	AGGCCT	3 cut(s)	98, 507, 771
Eco24I	GRGCYC	2 cut(s)	77, 519
Eco32I	GATATC	2 cut(s)	660, 1137
Eco47I	GGWCC	4 cut(s)	150, 467, 686, 701
Eco52I	CGGCCG	1 cut(s)	340
Eco57I	CTGAAG	1 cut(s)	476
Eco88I	CYCGRG	2 cut(s)	374, 860
Eco91I	GGTNACC	1 cut(s)	1081
EcoO109I	RGGNCCY	2 cut(s)	64, 686
EcoO65I	GGTNACC	1 cut(s)	1081
EcoRII	CCWGG	2 cut(s)	561, 987
EcoRV	GATATC	2 cut(s)	660, 1137
EcoT14I	CCWWGG	1 cut(s)	644
EcoT38I	GRGCYC	2 cut(s)	77, 519
ErhI	CCWWGG	1 cut(s)	644
Esp3I	CGTCTC	1 cut(s)	970
FaeI	CATG	9 cut(s)	449, 574, 620, 648, 733, 782, 850, 877, 1219
FalI	AAGNNNNNCTT	2 cut(s)	798, 830
FaqI	GGGAC	3 cut(s)	568, 672, 687
FatI	CATG	9 cut(s)	445, 570, 616, 644, 729, 778, 846, 873, 1215
FauI	CCCGC	2 cut(s)	57, 77
FokI	GGATG	3 cut(s)	32, 286, 479
FriOI	GRGCYC	2 cut(s)	77, 519
FspI	TGCGCA	1 cut(s)	548
GlaI	GCGC	4 cut(s)	195, 197, 267, 548
GsaI	CCCAGC	1 cut(s)	83
GsuI	CTGGAG	2 cut(s)	92, 1056
HaeIII	GGCC	6 cut(s)	65, 98, 342, 507, 569, 771
HgaI	GACGC	4 cut(s)	139, 196, 253, 320
HhaI	GCGC	4 cut(s)	196, 198, 268, 549
Hin1I	GRCGYC	3 cut(s)	120, 207, 312
Hin1II	CATG	9 cut(s)	449, 574, 620, 648, 733, 782, 850, 877, 1219
Hin6I	GCGC	4 cut(s)	194, 196, 266, 547
HinP1I	GCGC	4 cut(s)	194, 196, 266, 547
HindIII	AAGCTT	1 cut(s)	1012
HinfI	GANTC	6 cut(s)	20, 442, 633, 998, 1187, 1319
HphI	GGTGA	3 cut(s)	1057, 1075, 1196
Hpy166II	GTNNAC	4 cut(s)	475, 1114, 1168, 1279
Hpy188I	TCNGA	6 cut(s)	456, 997, 1010, 1033, 1141, 1199
Hpy188III	TCNNGA	6 cut(s)	127, 374, 446, 787, 847, 1073
Hpy8I	GTNNAC	4 cut(s)	475, 1114, 1168, 1279
Hpy99I	CGWCG	3 cut(s)	247, 1037, 1040
HpyCH4III	ACNGT	5 cut(s)	190, 479, 541, 959, 1288
HpyCH4IV	ACGT	3 cut(s)	57, 120, 1170
HpyCH4V	TGCA	6 cut(s)	139, 424, 696, 800, 1126, 1146
HpyF10VI	GCNNNNNNNGC	8 cut(s)	81, 139, 204, 339, 587, 646, 680, 841
HpyF3I	CTNAG	3 cut(s)	269, 735, 1158
HpySE526I	ACGT	3 cut(s)	57, 120, 1170
Hsp92I	GRCGYC	3 cut(s)	120, 207, 312
Hsp92II	CATG	9 cut(s)	449, 574, 620, 648, 733, 782, 850, 877, 1219
HspAI	GCGC	4 cut(s)	194, 196, 266, 547
Kzo9I	GATC	2 cut(s)	278, 1060
Lsp1109I	GCAGC	6 cut(s)	123, 151, 436, 627, 822, 1138
LweI	GCATC	1 cut(s)	256
MabI	ACCWGGT	1 cut(s)	987
MaeII	ACGT	3 cut(s)	57, 120, 1170
MaeIII	GTNAC	3 cut(s)	391, 1081, 1211
MalI	GATC	2 cut(s)	280, 1062
MboI	GATC	2 cut(s)	278, 1060
MboII	GAAGA	7 cut(s)	622, 914, 972, 1243, 1246, 1249, 1343
MflI	RGATCY	2 cut(s)	278, 1060
MhlI	GDGCHC	4 cut(s)	77, 484, 519, 1329
MluCI	AATT	3 cut(s)	168, 414, 974
MlyI	GAGTC	2 cut(s)	451, 642
MmeI	TCCRAC	4 cut(s)	560, 966, 1038, 1056
MroXI	GAANNNNTTC	2 cut(s)	507, 810
MseI	TTAA	2 cut(s)	36, 306
MslI	CAYNNNNRTG	1 cut(s)	1274
MspR9I	CCNGG	9 cut(s)	154, 212, 322, 355, 497, 563, 861, 862, 989
Mva1269I	GAATGC	1 cut(s)	1148
MvaI	CCWGG	2 cut(s)	563, 989
MvnI	CGCG	3 cut(s)	133, 196, 266
MwoI	GCNNNNNNNGC	8 cut(s)	81, 139, 204, 339, 587, 646, 680, 841
NciI	CCSGG	7 cut(s)	154, 212, 322, 355, 497, 861, 862
NcoI	CCATGG	1 cut(s)	644
NdeII	GATC	2 cut(s)	278, 1060
NlaIII	CATG	9 cut(s)	449, 574, 620, 648, 733, 782, 850, 877, 1219
NlaIV	GGNNCC	6 cut(s)	184, 280, 364, 468, 688, 703
NmuCI	GTSAC	2 cut(s)	391, 1081
NsbI	TGCGCA	1 cut(s)	548
NspI	RCATGY	1 cut(s)	1219
PaeR7I	CTCGAG	1 cut(s)	374
PagI	TCATGA	2 cut(s)	445, 846
PauI	GCGCGC	1 cut(s)	194
PceI	AGGCCT	3 cut(s)	98, 507, 771
PciI	ACATGT	1 cut(s)	1215
PctI	GAATGC	1 cut(s)	1148
PdmI	GAANNNNTTC	2 cut(s)	507, 810
PfeI	GAWTC	4 cut(s)	20, 998, 1187, 1319
Pfl23II	CGTACG	1 cut(s)	54
PflMI	CCANNNNNTGG	1 cut(s)	876
PfoI	TCCNGGA	1 cut(s)	495
PinAI	ACCGGT	1 cut(s)	698
PleI	GAGTC	2 cut(s)	450, 641
PpsI	GAGTC	2 cut(s)	450, 641
PpuMI	RGGWCCY	1 cut(s)	686
PscI	ACATGT	1 cut(s)	1215
Psp5II	RGGWCCY	1 cut(s)	686
Psp6I	CCWGG	2 cut(s)	561, 987
PspEI	GGTNACC	1 cut(s)	1081
PspFI	CCCAGC	1 cut(s)	79
PspGI	CCWGG	2 cut(s)	561, 987
PspLI	CGTACG	1 cut(s)	54
PspN4I	GGNNCC	6 cut(s)	184, 280, 364, 468, 688, 703
PspPI	GGNCC	5 cut(s)	64, 150, 467, 686, 701
PspPPI	RGGWCCY	1 cut(s)	686
PstI	CTGCAG	2 cut(s)	141, 426
PsuI	RGATCY	2 cut(s)	278, 1060
PteI	GCGCGC	1 cut(s)	194
RsaI	GTAC	5 cut(s)	56, 263, 474, 487, 1220
RsaNI	GTAC	5 cut(s)	55, 262, 473, 486, 1219
RseI	CAYNNNNRTG	1 cut(s)	1274
Rsr2I	CGGWCCG	1 cut(s)	150
RsrII	CGGWCCG	1 cut(s)	150
SaqAI	TTAA	2 cut(s)	36, 306
Sau3AI	GATC	2 cut(s)	278, 1060
Sau96I	GGNCC	5 cut(s)	64, 150, 467, 686, 701
SchI	GAGTC	2 cut(s)	451, 642
ScrFI	CCNGG	9 cut(s)	154, 212, 322, 355, 497, 563, 861, 862, 989
SduI	GDGCHC	4 cut(s)	77, 484, 519, 1329
SexAI	ACCWGGT	1 cut(s)	987
SfaNI	GCATC	1 cut(s)	256
SfcI	CTRYAG	3 cut(s)	137, 160, 422
Sfr274I	CTCGAG	1 cut(s)	374
SinI	GGWCC	4 cut(s)	150, 467, 686, 701
SlaI	CTCGAG	1 cut(s)	374
SmaI	CCCGGG	1 cut(s)	862
SmiMI	CAYNNNNRTG	1 cut(s)	1274
SmlI	CTYRAG	1 cut(s)	374
SmoI	CTYRAG	1 cut(s)	374
Sse9I	AATT	3 cut(s)	168, 414, 974
SseBI	AGGCCT	3 cut(s)	98, 507, 771
SsiI	CCGC	6 cut(s)	50, 84, 133, 180, 566, 1101
StuI	AGGCCT	3 cut(s)	98, 507, 771
StyD4I	CCNGG	9 cut(s)	152, 210, 320, 353, 495, 561, 859, 860, 987
StyI	CCWWGG	1 cut(s)	644
TaaI	ACNGT	5 cut(s)	190, 479, 541, 959, 1288
TaiI	ACGT	3 cut(s)	60, 123, 1173
TaqI	TCGA	4 cut(s)	144, 375, 402, 1329
TasI	AATT	3 cut(s)	168, 414, 974
TatI	WGTACW	2 cut(s)	472, 1218
TauI	GCSGC	4 cut(s)	136, 183, 569, 1103
TfiI	GAWTC	4 cut(s)	20, 998, 1187, 1319
Tru1I	TTAA	2 cut(s)	36, 306
Tru9I	TTAA	2 cut(s)	36, 306
TscAI	CASTG	5 cut(s)	182, 482, 1291, 1318, 1329
TseFI	GTSAC	2 cut(s)	391, 1081
TseI	GCWGC	6 cut(s)	136, 139, 424, 640, 835, 1126
Tsp45I	GTSAC	2 cut(s)	391, 1081
TspDTI	ATGAA	5 cut(s)	337, 462, 633, 1179, 1332
TspGWI	ACGGA	1 cut(s)	215
TspMI	CCCGGG	1 cut(s)	860
TspRI	CASTG	5 cut(s)	182, 482, 1291, 1318, 1329
Van91I	CCANNNNNTGG	1 cut(s)	876
VpaK11BI	GGWCC	4 cut(s)	150, 467, 686, 701
XapI	RAATTY	1 cut(s)	974
XceI	RCATGY	1 cut(s)	1219
XhoI	CTCGAG	1 cut(s)	374
XmaI	CCCGGG	1 cut(s)	860
XmnI	GAANNNNTTC	2 cut(s)	507, 810
ZraI	GACGTC	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.