Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0007747

Physical Location & Seq

Genomic Coordinates Reverse (-)

22911533 .. 22915278

Gene Structure 3746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGCTTCTTGGGCTCTTTCGCCGGCAGCTCCAGTAACCGGTCGCTGTATAGTGACTCCTGCCAGGACAAAGTGGTCCTCCTCCTTCTGGGTTCGTTCTTCTCTGGACACAAATGTTTCTGACATGGGGGTTAACGCTCCAAAAGGGTTGTTTCCACCTGAACCGGAGCGTTACCGAGGTCCAAAGCTGAAAGTGGCCATTATCGGAGCTGGACTCGCTGGCATGTCAACCGCGGTTGAGCTTTTGGATCAAGGCCATGAGGTGGATATTTATGAGTCGAGGCCTTTCATTGGCGGCAAAGTGGGCTCTTTTGTTGATAAAAAAGGGAACCACATTGAAATGGGACTCCATGTTTTCTTTGGTTGCTACAGTAATCTTTTCCGATTAATGAAAAAGGTGGGTGCAGACGAAAATCTTCTTGTCAAGGATCATACTCACACTTTTGTAAATAAAGGGGGTAACATTGGTGAACTTGATTTTCGGTTCCCAATTGGAGCACCAATACATGGGATTCTTGCCTTTTTGTCTACTAATCAGATTAAGACTTACGATAAAGCAAGAAATGCAGTGGCTCTTGCCTTAAGTCCGGTTGTAAAGGCTCTTGTTGATCCAGATGGAGCGTTGCAGGATGTCCGGAATTTGGATAGTATAAGTTTCTCTGATTGGTTCTTGTCAAAAGGTGGCACGCGAATGAGTATCCAGCGGATGTGGGATCCTGTTGCATATGCACTTGGGTTTATTGACTGTGATAATATTAGTGCTCGTTGTATGCTCACTATATTCACATTGTTTGCCACTAAGACTGAGGCTTCCCTTCTACGCATGCTCAAGGGTTCGCCAGATGTTTACTTAAGTGGCCCCATCAGAGATTATATCATTGCAAAGGGGGGCAGGTTTCATCTTAGGTGGGGGTGTAGAGAAATACTGTATGATAAATCTTCTGATGGAGAAACATATGTTGCCGGATTTTCGATGTCCAAGGCTACAAATAAGAAAGTTGTGAAAGCTGACGCTTATGTTGCAGCATGTGATGTGCCTGGAATCAAGAGATTGCTTCCTTCTCAATGGAGAGAATTGGATTTTTTCAATAATATTTATGAGCTAGTCGGAGTTCCTGTTGTCACTGTGCAACTTAGATATGATGGTTGGGTCACAGAGTTACAAGATCTAGAGCGGTCAAGACTAATGGACGAGATATTTTTGTTTGATAGGAAATCGAAGCAAGCTTTGGGATTAGATAATCTCTTATATACTCCCGATGCAGATTTCTCTTGCTTTGCCGACCTAGCGCTTACTTCTCCTGAAGATTACTACATTGTGGGACAAGGTTCACTCCTCCAATGCGTTTTGACACCAGGTGATCCTTACATGCCTTTACCAAACGAAGAAATTATAGCAAGAGTGACGAAACAGGTTTTGGCTTTATTCCCATCATCCCAAGGTTTGGAAGTCACTTGGTCATCAGTTGTCAAAATTGGGCAATCTCTCTATCGGGAGGGACCTGGCAACGATCCGTTTAGACCTGATCAGAAGACACCCGTGAAGAATTTCTTCCTTGCCGGCTCATACACAAAACAAGACTATATCGACAGCATGGAAGGGGCAACTTTGTCCGGCAGGCAAGCTTCTGCATATATATGTGCTGCCGGGGAAGAGTTGGTGGGATTGCGAAAGAAGTTTGCAGCCAAAGATTCTGGGGAATACGCAAAAGCTGTTAATACTACCGATGAGCTGAGTCTTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009509 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016119 GO:0016120 GO:0016491 GO:0016627 GO:0016635 GO:0031967 GO:0031975 GO:0042214 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046246 GO:0052886 GO:0052889 GO:0055114 GO:0071704 GO:1901175 GO:1901177 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

582

Amino Acids

64.05

Weight (kDa)

6.43

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAO	PF01266	64 - 99	6.4e-06	FAD dependent oxidoreductase
NAD_binding_8	PF13450	67 - 132	7e-14	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	72 - 546	1.2e-72	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04870 AT3G04870 AT3G04870 AT3G04870
fragaria_vesca	FvH4_6g03420 FvH4_6g03420
malus_domestica	MD04G1220900.v1.1 MD12G1237300.v1.1
prunus_persica	Prupe.6G340000_v2.0.a1 Prupe.6G340000_v2.0.a1
pyrus_communis	pycom04g19540 pycom12g21820
rosa_chinensis	RchiOBHm_Chr3g0451921
rosa_laevigata	RLG00000025638
rosa_multiflora	Rmu_sc0002901.1_g000003
rosa_roxburghii	Rroxscaffold_164G00436190 Rroxscaffold_6G00429090
rosa_rugosa	Rorug02G0637300 Rorug02G0637400
rosa_samantha	Rh3AG039100 Rh3BG040400 Rh3CG038900 Rh3DG039600
rosa_wichuraiana	Rw3G002920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	73
Acc36I	ACCTGC	1 cut(s)	882
AccB7I	CCANNNNNTGG	3 cut(s)	262, 506, 1444
AccBSI	CCGCTC	1 cut(s)	1174
AccI	GTMKAC	1 cut(s)	527
AccII	CGCG	2 cut(s)	233, 688
AccIII	TCCGGA	1 cut(s)	633
AciI	CCGC	5 cut(s)	231, 233, 294, 703, 1174
AclWI	GGATC	7 cut(s)	255, 435, 602, 707, 720, 1355, 1505
AcoI	YGGCCR	1 cut(s)	195
AcsI	RAATTY	2 cut(s)	637, 1546
AcuI	CTGAAG	1 cut(s)	1323
AdeI	CACNNNGTG	1 cut(s)	1358
AfeI	AGCGCT	1 cut(s)	1290
AfiI	CCNNNNNNNGG	7 cut(s)	38, 87, 262, 290, 506, 640, 1444
AflII	CTTAAG	2 cut(s)	580, 850
AgeI	ACCGGT	1 cut(s)	38
AgsI	TTSAA	2 cut(s)	338, 1087
AjnI	CCWGG	4 cut(s)	62, 1036, 1354, 1501
AjuI	GAANNNNNNNTTGG	4 cut(s)	1211, 1243, 1400, 1432
Alw21I	GWGCWC	2 cut(s)	499, 763
AlwI	GGATC	7 cut(s)	255, 435, 602, 707, 720, 1355, 1505
Aor13HI	TCCGGA	1 cut(s)	633
Aor51HI	AGCGCT	1 cut(s)	1290
AoxI	GGCC	4 cut(s)	195, 253, 281, 856
ApeKI	GCWGC	4 cut(s)	26, 1022, 1643, 1682
ApoI	RAATTY	2 cut(s)	637, 1546
AseI	ATTAAT	1 cut(s)	386
AsiGI	ACCGGT	1 cut(s)	38
Asp700I	GAANNNNTTC	3 cut(s)	414, 1547, 1550
AspLEI	GCGC	1 cut(s)	1291
AspS9I	GGNCC	4 cut(s)	75, 179, 857, 1499
AsuC2I	CCSGG	1 cut(s)	1648
AsuHPI	GGTGA	2 cut(s)	479, 1370
AvaII	GGWCC	3 cut(s)	75, 179, 1499
BalI	TGGCCA	1 cut(s)	197
BamHI	GGATCC	1 cut(s)	712
BanII	GRGCYC	2 cut(s)	16, 308
BbsI	GAAGAC	1 cut(s)	1538
Bbv12I	GWGCWC	2 cut(s)	499, 763
BbvI	GCAGC	4 cut(s)	38, 1034, 1630, 1694
BccI	CCATC	5 cut(s)	608, 869, 938, 1136, 1438
BciT130I	CCWGG	4 cut(s)	64, 1038, 1356, 1503
BciVI	GTATCC	1 cut(s)	707
BclI	TGATCA	1 cut(s)	1525
BcnI	CCSGG	1 cut(s)	1648
BfaI	CTAG	3 cut(s)	1103, 1169, 1286
BfmI	CTRYAG	1 cut(s)	367
BfoI	RGCGCY	1 cut(s)	1292
BfrI	CTTAAG	2 cut(s)	580, 850
BfuAI	ACCTGC	1 cut(s)	882
BfuI	GTATCC	1 cut(s)	707
BglII	AGATCT	1 cut(s)	1165
BisI	GCNGC	5 cut(s)	27, 295, 1023, 1644, 1683
BlsI	GCNGC	5 cut(s)	28, 296, 1024, 1645, 1684
Bme1390I	CCNGG	5 cut(s)	64, 1038, 1356, 1503, 1648
Bme18I	GGWCC	3 cut(s)	75, 179, 1499
BmgT120I	GGNCC	4 cut(s)	75, 179, 857, 1499
BmiI	GGNNCC	5 cut(s)	329, 485, 714, 859, 1500
BmrFI	CCNGG	5 cut(s)	64, 1038, 1356, 1503, 1648
BmsI	GCATC	1 cut(s)	1249
BpiI	GAAGAC	1 cut(s)	1538
BplI	GAGNNNNNCTC	2 cut(s)	198, 230
BpmI	CTGGAG	1 cut(s)	15
BpuEI	CTTGAG	1 cut(s)	812
BpuMI	CCSGG	1 cut(s)	1648
BsaJI	CCNNGG	5 cut(s)	175, 231, 978, 1438, 1647
BsaWI	WCCGGW	4 cut(s)	38, 163, 586, 633
BsaXI	ACNNNNNCTCC	2 cut(s)	1101, 1131
Bsc4I	CCNNNNNNNGG	7 cut(s)	38, 87, 262, 290, 506, 640, 1444
Bse118I	RCCGGY	3 cut(s)	22, 38, 1559
Bse1I	ACTGG	1 cut(s)	32
Bse3DI	GCAATG	1 cut(s)	876
BseAI	TCCGGA	1 cut(s)	633
BseBI	CCWGG	4 cut(s)	64, 1038, 1356, 1503
BseDI	CCNNGG	5 cut(s)	175, 231, 978, 1438, 1647
BseGI	GGATG	3 cut(s)	634, 711, 1433
BseLI	CCNNNNNNNGG	7 cut(s)	38, 87, 262, 290, 506, 640, 1444
BseMI	GCAATG	1 cut(s)	876
BseMII	CTCAG	2 cut(s)	795, 1724
BseNI	ACTGG	1 cut(s)	32
BseRI	GAGGAG	2 cut(s)	70, 1325
BseXI	GCAGC	4 cut(s)	38, 1034, 1630, 1694
BsgI	GTGCAG	1 cut(s)	423
Bsh1236I	CGCG	2 cut(s)	233, 688
Bsh1285I	CGRYCG	1 cut(s)	43
BshFI	GGCC	4 cut(s)	197, 255, 283, 858
BshTI	ACCGGT	1 cut(s)	38
BsiEI	CGRYCG	1 cut(s)	43
BsiHKAI	GWGCWC	2 cut(s)	499, 763
BsiSI	CCGG	9 cut(s)	23, 39, 164, 587, 634, 963, 1560, 1614, 1647
BslFI	GGGAC	3 cut(s)	357, 1335, 1512
BslI	CCNNNNNNNGG	7 cut(s)	38, 87, 262, 290, 506, 640, 1444
BsmFI	GGGAC	3 cut(s)	357, 1335, 1512
BsnI	GGCC	4 cut(s)	197, 255, 283, 858
Bsp1286I	GDGCHC	4 cut(s)	16, 308, 499, 763
Bsp13I	TCCGGA	1 cut(s)	633
Bsp143I	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
BspACI	CCGC	5 cut(s)	231, 233, 294, 703, 1174
BspANI	GGCC	4 cut(s)	197, 255, 283, 858
BspCNI	CTCAG	2 cut(s)	796, 1725
BspEI	TCCGGA	1 cut(s)	633
BspFNI	CGCG	2 cut(s)	233, 688
BspLI	GGNNCC	5 cut(s)	329, 485, 714, 859, 1500
BspMI	ACCTGC	1 cut(s)	882
BspPI	GGATC	7 cut(s)	255, 435, 602, 707, 720, 1355, 1505
BspTI	CTTAAG	2 cut(s)	580, 850
BsrBI	CCGCTC	1 cut(s)	1174
BsrDI	GCAATG	1 cut(s)	876
BsrFI	RCCGGY	3 cut(s)	22, 38, 1559
BsrI	ACTGG	1 cut(s)	32
BssAI	RCCGGY	3 cut(s)	22, 38, 1559
BssECI	CCNNGG	5 cut(s)	175, 231, 978, 1438, 1647
BssMI	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
BssT1I	CCWWGG	2 cut(s)	978, 1438
Bst2UI	CCWGG	4 cut(s)	64, 1038, 1356, 1503
Bst4CI	ACNGT	4 cut(s)	371, 746, 927, 1126
Bst6I	CTCTTC	1 cut(s)	1647
BstAFI	CTTAAG	2 cut(s)	580, 850
BstAPI	GCANNNNNTGC	1 cut(s)	563
BstC8I	GCNNGC	8 cut(s)	24, 220, 686, 824, 1224, 1561, 1619, 1623
BstDEI	CTNAG	5 cut(s)	798, 804, 902, 1133, 1733
BstDSI	CCRYGG	1 cut(s)	231
BstF5I	GGATG	3 cut(s)	634, 711, 1433
BstFNI	CGCG	2 cut(s)	233, 688
BstH2I	RGCGCY	1 cut(s)	1292
BstHHI	GCGC	1 cut(s)	1291
BstKTI	GATC	8 cut(s)	250, 430, 610, 715, 1168, 1363, 1513, 1528
BstMBI	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 215, 303, 563, 1019, 1286
BstNI	CCWGG	4 cut(s)	64, 1038, 1356, 1503
BstNSI	RCATGY	4 cut(s)	226, 826, 1029, 1372
BstSCI	CCNGG	5 cut(s)	62, 1036, 1354, 1501, 1646
BstSFI	CTRYAG	1 cut(s)	367
BstUI	CGCG	2 cut(s)	233, 688
BstV1I	GCAGC	4 cut(s)	38, 1034, 1630, 1694
BstV2I	GAAGAC	1 cut(s)	1538
BstX2I	RGATCY	2 cut(s)	712, 1165
BstYI	RGATCY	2 cut(s)	712, 1165
BsuI	GTATCC	1 cut(s)	707
BsuRI	GGCC	4 cut(s)	197, 255, 283, 858
BtgI	CCRYGG	1 cut(s)	231
BtsCI	GGATG	3 cut(s)	634, 711, 1433
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	2 cut(s)	573, 1122
BveI	ACCTGC	1 cut(s)	882
Cac8I	GCNNGC	8 cut(s)	24, 220, 686, 824, 1224, 1561, 1619, 1623
CfoI	GCGC	1 cut(s)	1291
Cfr10I	RCCGGY	3 cut(s)	22, 38, 1559
Cfr13I	GGNCC	4 cut(s)	75, 179, 857, 1499
Cfr42I	CCGCGG	1 cut(s)	234
CseI	GACGC	1 cut(s)	1019
CsiI	ACCWGGT	1 cut(s)	1354
CspAI	ACCGGT	1 cut(s)	38
CviAII	CATG	9 cut(s)	124, 223, 257, 350, 506, 823, 1026, 1369, 1594
DdeI	CTNAG	5 cut(s)	798, 804, 902, 1133, 1733
DpnI	GATC	8 cut(s)	249, 429, 609, 714, 1167, 1362, 1512, 1527
DpnII	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
DraIII	CACNNNGTG	1 cut(s)	1358
DrdI	GACNNNNNNGTC	1 cut(s)	73
DseDI	GACNNNNNNGTC	1 cut(s)	73
EaeI	YGGCCR	1 cut(s)	195
Eam1104I	CTCTTC	1 cut(s)	1647
EarI	CTCTTC	1 cut(s)	1647
Eco130I	CCWWGG	2 cut(s)	978, 1438
Eco147I	AGGCCT	1 cut(s)	283
Eco24I	GRGCYC	2 cut(s)	16, 308
Eco47I	GGWCC	3 cut(s)	75, 179, 1499
Eco47III	AGCGCT	1 cut(s)	1290
Eco57I	CTGAAG	1 cut(s)	1323
EcoO109I	RGGNCCY	1 cut(s)	1499
EcoRII	CCWGG	4 cut(s)	62, 1036, 1354, 1501
EcoT14I	CCWWGG	2 cut(s)	978, 1438
EcoT38I	GRGCYC	2 cut(s)	16, 308
ErhI	CCWWGG	2 cut(s)	978, 1438
FaeI	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1372, 1597
FalI	AAGNNNNNCTT	2 cut(s)	1535, 1567
FaqI	GGGAC	3 cut(s)	357, 1335, 1512
FatI	CATG	9 cut(s)	123, 222, 256, 349, 505, 822, 1025, 1368, 1593
FauNDI	CATATG	2 cut(s)	724, 955
FbaI	TGATCA	1 cut(s)	1525
FblI	GTMKAC	1 cut(s)	527
Fnu4HI	GCNGC	5 cut(s)	27, 295, 1023, 1644, 1683
FokI	GGATG	3 cut(s)	641, 718, 1420
FriOI	GRGCYC	2 cut(s)	16, 308
Fsp4HI	GCNGC	5 cut(s)	27, 295, 1023, 1644, 1683
FspBI	CTAG	3 cut(s)	1103, 1169, 1286
GlaI	GCGC	1 cut(s)	1290
GluI	GCNGC	5 cut(s)	27, 295, 1023, 1644, 1683
GsuI	CTGGAG	1 cut(s)	15
HaeII	RGCGCY	1 cut(s)	1292
HaeIII	GGCC	4 cut(s)	197, 255, 283, 858
HapII	CCGG	9 cut(s)	23, 39, 164, 587, 634, 963, 1560, 1614, 1647
HgaI	GACGC	1 cut(s)	1019
HhaI	GCGC	1 cut(s)	1291
Hin1II	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1372, 1597
Hin6I	GCGC	1 cut(s)	1289
HinP1I	GCGC	1 cut(s)	1289
HincII	GTYRAC	2 cut(s)	133, 228
HindII	GTYRAC	2 cut(s)	133, 228
HindIII	AAGCTT	2 cut(s)	1224, 1623
HinfI	GANTC	8 cut(s)	55, 213, 275, 345, 511, 1041, 1691, 1735
HpaI	GTTAAC	1 cut(s)	133
HpaII	CCGG	9 cut(s)	23, 39, 164, 587, 634, 963, 1560, 1614, 1647
HphI	GGTGA	2 cut(s)	479, 1370
Hpy166II	GTNNAC	6 cut(s)	133, 228, 470, 528, 847, 1331
Hpy188I	TCNGA	9 cut(s)	121, 206, 383, 537, 661, 866, 943, 1109, 1530
Hpy188III	TCNNGA	9 cut(s)	104, 611, 634, 1045, 1169, 1179, 1256, 1301, 1493
Hpy8I	GTNNAC	6 cut(s)	133, 228, 470, 528, 847, 1331
HpyAV	CCTTC	4 cut(s)	94, 824, 1068, 1592
HpyCH4III	ACNGT	4 cut(s)	371, 746, 927, 1126
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 215, 303, 563, 1019, 1286
HpyF3I	CTNAG	5 cut(s)	798, 804, 902, 1133, 1733
Hsp92II	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1372, 1597
HspAI	GCGC	1 cut(s)	1289
Kpn2I	TCCGGA	1 cut(s)	633
KroI	GCCGGC	2 cut(s)	22, 1559
KroNI	GCCGGC	2 cut(s)	24, 1561
Ksp22I	TGATCA	1 cut(s)	1525
KspAI	GTTAAC	1 cut(s)	133
KspI	CCGCGG	1 cut(s)	234
Kzo9I	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
LmnI	GCTCC	6 cut(s)	34, 142, 166, 206, 494, 617
Lsp1109I	GCAGC	4 cut(s)	38, 1034, 1630, 1694
LweI	GCATC	1 cut(s)	1249
MabI	ACCWGGT	1 cut(s)	1354
MaeI	CTAG	3 cut(s)	1103, 1169, 1286
MaeIII	GTNAC	9 cut(s)	34, 52, 170, 458, 1120, 1150, 1158, 1402, 1450
MalI	GATC	8 cut(s)	249, 429, 609, 714, 1167, 1362, 1512, 1527
MbiI	CCGCTC	1 cut(s)	1174
MboI	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
MboII	GAAGA	9 cut(s)	90, 407, 930, 1316, 1397, 1543, 1543, 1555, 1664
MfeI	CAATTG	1 cut(s)	489
MflI	RGATCY	2 cut(s)	712, 1165
MhlI	GDGCHC	4 cut(s)	16, 308, 499, 763
MlsI	TGGCCA	1 cut(s)	197
MluCI	AATT	6 cut(s)	489, 637, 1073, 1389, 1473, 1546
MluNI	TGGCCA	1 cut(s)	197
MlyI	GAGTC	5 cut(s)	49, 207, 284, 339, 1744
MmeI	TCCRAC	1 cut(s)	1087
MnlI	CCTC	8 cut(s)	88, 91, 170, 253, 273, 799, 1346, 1489
Mox20I	TGGCCA	1 cut(s)	197
MroI	TCCGGA	1 cut(s)	633
MroNI	GCCGGC	2 cut(s)	22, 1559
MroXI	GAANNNNTTC	3 cut(s)	414, 1547, 1550
MscI	TGGCCA	1 cut(s)	197
MseI	TTAA	6 cut(s)	132, 386, 540, 581, 851, 1716
MslI	CAYNNNNRTG	3 cut(s)	338, 689, 1636
Msp20I	TGGCCA	1 cut(s)	197
MspA1I	CMGCKG	2 cut(s)	233, 703
MspCI	CTTAAG	2 cut(s)	580, 850
MspI	CCGG	9 cut(s)	23, 39, 164, 587, 634, 963, 1560, 1614, 1647
MspR9I	CCNGG	5 cut(s)	64, 1038, 1356, 1503, 1648
MunI	CAATTG	1 cut(s)	489
MvaI	CCWGG	4 cut(s)	64, 1038, 1356, 1503
MvnI	CGCG	2 cut(s)	233, 688
MwoI	GCNNNNNNNGC	6 cut(s)	11, 215, 303, 563, 1019, 1286
NaeI	GCCGGC	2 cut(s)	24, 1561
NciI	CCSGG	1 cut(s)	1648
NdeI	CATATG	2 cut(s)	724, 955
NdeII	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
NgoMIV	GCCGGC	2 cut(s)	22, 1559
NlaIII	CATG	9 cut(s)	127, 226, 260, 353, 509, 826, 1029, 1372, 1597
NlaIV	GGNNCC	5 cut(s)	329, 485, 714, 859, 1500
NmuCI	GTSAC	5 cut(s)	52, 1120, 1150, 1402, 1450
NspI	RCATGY	4 cut(s)	226, 826, 1029, 1372
PaeI	GCATGC	1 cut(s)	826
PceI	AGGCCT	1 cut(s)	283
PdiI	GCCGGC	2 cut(s)	24, 1561
PdmI	GAANNNNTTC	3 cut(s)	414, 1547, 1550
PfeI	GAWTC	3 cut(s)	511, 1041, 1691
PflMI	CCANNNNNTGG	3 cut(s)	262, 506, 1444
PinAI	ACCGGT	1 cut(s)	38
PkrI	GCNGC	5 cut(s)	28, 296, 1024, 1645, 1684
PleI	GAGTC	5 cut(s)	49, 207, 283, 339, 1743
PpsI	GAGTC	5 cut(s)	49, 207, 283, 339, 1743
PpuMI	RGGWCCY	1 cut(s)	1499
PshBI	ATTAAT	1 cut(s)	386
Psp5II	RGGWCCY	1 cut(s)	1499
Psp6I	CCWGG	4 cut(s)	62, 1036, 1354, 1501
PspGI	CCWGG	4 cut(s)	62, 1036, 1354, 1501
PspN4I	GGNNCC	5 cut(s)	329, 485, 714, 859, 1500
PspPI	GGNCC	4 cut(s)	75, 179, 857, 1499
PspPPI	RGGWCCY	1 cut(s)	1499
PsuI	RGATCY	2 cut(s)	712, 1165
RseI	CAYNNNNRTG	3 cut(s)	338, 689, 1636
SacII	CCGCGG	1 cut(s)	234
SaqAI	TTAA	6 cut(s)	132, 386, 540, 581, 851, 1716
SatI	GCNGC	5 cut(s)	27, 295, 1023, 1644, 1683
Sau3AI	GATC	8 cut(s)	247, 427, 607, 712, 1165, 1360, 1510, 1525
Sau96I	GGNCC	4 cut(s)	75, 179, 857, 1499
SchI	GAGTC	5 cut(s)	49, 207, 284, 339, 1744
ScrFI	CCNGG	5 cut(s)	64, 1038, 1356, 1503, 1648
SduI	GDGCHC	4 cut(s)	16, 308, 499, 763
SexAI	ACCWGGT	1 cut(s)	1354
SfaNI	GCATC	1 cut(s)	1249
SfcI	CTRYAG	1 cut(s)	367
Sfr303I	CCGCGG	1 cut(s)	234
SgrBI	CCGCGG	1 cut(s)	234
SinI	GGWCC	3 cut(s)	75, 179, 1499
SmiMI	CAYNNNNRTG	3 cut(s)	338, 689, 1636
SmlI	CTYRAG	3 cut(s)	580, 827, 850
SmoI	CTYRAG	3 cut(s)	580, 827, 850
SphI	GCATGC	1 cut(s)	826
Sse9I	AATT	6 cut(s)	489, 637, 1073, 1389, 1473, 1546
SseBI	AGGCCT	1 cut(s)	283
SsiI	CCGC	5 cut(s)	231, 233, 294, 703, 1174
SspI	AATATT	2 cut(s)	754, 1093
SspMI	CTAG	3 cut(s)	1103, 1169, 1286
StuI	AGGCCT	1 cut(s)	283
StyD4I	CCNGG	5 cut(s)	62, 1036, 1354, 1501, 1646
StyI	CCWWGG	2 cut(s)	978, 1438
TaaI	ACNGT	4 cut(s)	371, 746, 927, 1126
TaqI	TCGA	4 cut(s)	278, 971, 1217, 1587
TasI	AATT	6 cut(s)	489, 637, 1073, 1389, 1473, 1546
TauI	GCSGC	1 cut(s)	297
TfiI	GAWTC	3 cut(s)	511, 1041, 1691
Tru1I	TTAA	6 cut(s)	132, 386, 540, 581, 851, 1716
Tru9I	TTAA	6 cut(s)	132, 386, 540, 581, 851, 1716
TscAI	CASTG	2 cut(s)	573, 1129
TseFI	GTSAC	5 cut(s)	52, 1120, 1150, 1402, 1450
TseI	GCWGC	4 cut(s)	26, 1022, 1643, 1682
Tsp45I	GTSAC	5 cut(s)	52, 1120, 1150, 1402, 1450
TspDTI	ATGAA	3 cut(s)	277, 404, 887
TspGWI	ACGGA	1 cut(s)	1503
TspRI	CASTG	2 cut(s)	573, 1129
Van91I	CCANNNNNTGG	3 cut(s)	262, 506, 1444
Vha464I	CTTAAG	2 cut(s)	580, 850
VpaK11BI	GGWCC	3 cut(s)	75, 179, 1499
VspI	ATTAAT	1 cut(s)	386
XapI	RAATTY	2 cut(s)	637, 1546
XbaI	TCTAGA	1 cut(s)	1168
XceI	RCATGY	4 cut(s)	226, 826, 1029, 1372
XcmI	CCANNNNNNNNNTGG	1 cut(s)	356
XmiI	GTMKAC	1 cut(s)	527
XmnI	GAANNNNTTC	3 cut(s)	414, 1547, 1550
XspI	CTAG	3 cut(s)	1103, 1169, 1286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.