Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0013829

Physical Location & Seq

Genomic Coordinates Reverse (-)

2433662 .. 2435104

Gene Structure 1443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g03670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGCCTCCAATCTTGCCGGACTTCTCCAACTCCGTCAAGCTCAAGTATGTCAAGCTCGGCTACCAGTACCTCGTCAACCACATTCTTACCCTCACTCTCATCCCCATCATGGCCGGAATCCTACTGGAGGTCCTCCGCCTCGGCCCCGACGAGCTTCTCAAGCTCTGGGACTCACTCCACTTCGCCCTCGTCCAAATCCTCTGCTCCTCATTCCTCATCATTTTCATCGCCACCGTCTACGTTATGTCCAAACCCCGATCGGTCTACCTCGTCGACTACGCCTGTTTCAAGCCTCCGGTCACCTGCCGCGTCCCCTTCTCCACCTTCATGGAGCACTCCCCGATCCTCGAGCGCTCGGGCCTCGGGGAGGAGACCTGCCTCCCTCCGGCGATTCACTACATTCCGCCCAACCCCACCATGGAGACCGCTAGGGGCGAGGCGGAGCTCGTCATCTTCTCCGCCATGGACTCTCTGTTCGAGAAGACTGGGCTCAAGCCCAAAGACATCGATATTCTCATTGTTAACTGTAGCCTCTTCTCGCCGACGCCGTCGCTCTCGGCGATGGTGATCAACAAGTACAAGCTCCGAAGCAACATCAAGAGCTTCAACCTCTCCGGCATGGGCTGCAGCGCTGGCCTCATTTCGATCGATTTAGCGCGCGACCTCCTCCAGGTGCATCCCAACTCTAACGCGGTGGTCGTCAGCACCGAGATCATCACCCCGAACTATTACCAAGGCAACGAGAGGGCGATGCTCCTCCCCAACTGCCTCTTCCGGATGGGCGGCGCCGCCTTGCTTTTATCAAACAGGAAGTCCGACCACCGCCGCGCAAAATACCGATTGGTCCACGTTGTAAGGACACACAAGGGAGCCGATGACAAGGCGTATAGGTGCGTGTTCGAGGAAGAAGACAAGGAAGGCAAAGTTGGAATTTCACTCTCTAAAGATCTGATGGCGATTGCCGGGGAAGCGTTGAAATCGAACATCACAACGATCGGCCCGCTGGTGCTGCCGGCGTCGGAGCAGTTGCTGTTTCTCTTCACGCTCATCGGCCGGAAAATCTTGAACCCGAAATGGAAGCCGTACATTCCTGATTTCCGAGAGGCGTTCGAGCACTTCTGCATCCACGCGGGCGGAAGGGCGGTGATCGACGAGCTGCAGAAGAATTTACAGCTGTCGGCGGAGCACTGCGAGGCGTCGAGGATGACACTGCACAGGTTCGGCAATACGTCGTCGTCGTCGCTGTGGTACGAGTTGGGGTACATCGAGGCGAAGGGTAGGATGAAAAAAGGTGATAGGCGCGGTTTGGAAGTGCAATCGGACCATCACAACAACGTCGGATGGGCCCTGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009653 GO:0009826 GO:0009856 GO:0009922 GO:0009987 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016740 GO:0016746 GO:0016747 GO:0022414 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0051704 GO:0060560 GO:0071704 GO:0071840 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

452

Amino Acids

50.45

Weight (kDa)

8.67

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAE1_CUT1_RppA	PF08392	80 - 353	6.6e-129	FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C	PF08541	371 - 433	7.7e-06	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C	PF02797	373 - 434	1.4e-08	Chalcone and stilbene synthases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013829)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25450 AT1G68530
fragaria_vesca	FvH4_4g27420
malus_domestica	MD13G1042400.v1.1 MD16G1043300.v1.1
prunus_persica	Prupe.1G310500_v2.0.a1
pyrus_communis	pycom13g03670 pycom13g03690 pycom16g03740
rosa_chinensis	RchiOBHm_Chr4g0435241
rosa_laevigata	RLG00000006606
rosa_multiflora	Rmu_ssc0000339.1_g000014
rosa_roxburghii	Rroxscaffold_5G00376470
rosa_rugosa	Rorug04G0283600
rosa_samantha	Rh4AG339100 Rh4DG341700
rosa_wichuraiana	Rw4G029580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	311
Acc36I	ACCTGC	2 cut(s)	311, 383
AccB1I	GGYRCC	1 cut(s)	785
AccI	GTMKAC	3 cut(s)	237, 264, 273
AccII	CGCG	7 cut(s)	309, 658, 660, 692, 828, 1130, 1302
AccIII	TCCGGA	1 cut(s)	774
AclWI	GGATC	1 cut(s)	337
AcoI	YGGCCR	2 cut(s)	111, 1051
AcsI	RAATTY	2 cut(s)	930, 1165
AcyI	GRCGYC	4 cut(s)	545, 786, 1016, 1196
AfaI	GTAC	5 cut(s)	68, 578, 1085, 1250, 1262
AfeI	AGCGCT	2 cut(s)	353, 631
AfiI	CCNNNNNNNGG	6 cut(s)	109, 127, 367, 385, 418, 670
AgsI	TTSAA	4 cut(s)	289, 607, 976, 1066
AjnI	CCWGG	2 cut(s)	669, 1347
AjuI	GAANNNNNNNTTGG	4 cut(s)	755, 787, 909, 941
AloI	GAACNNNNNNTCC	2 cut(s)	458, 490
AluBI	AGCT	9 cut(s)	40, 55, 154, 163, 445, 583, 603, 1156, 1174
AluI	AGCT	9 cut(s)	40, 55, 154, 163, 445, 583, 603, 1156, 1174
Alw21I	GWGCWC	4 cut(s)	336, 447, 1116, 1188
Alw26I	GTCTC	2 cut(s)	365, 416
AlwI	GGATC	1 cut(s)	337
AlwNI	CAGNNNCTG	1 cut(s)	1030
Ama87I	CYCGRG	3 cut(s)	347, 355, 362
Aor13HI	TCCGGA	1 cut(s)	774
Aor51HI	AGCGCT	2 cut(s)	353, 631
AoxI	GGCC	7 cut(s)	111, 142, 358, 634, 997, 1051, 1344
ApaI	GGGCCC	1 cut(s)	1348
ApeKI	GCWGC	4 cut(s)	624, 627, 1009, 1156
ApoI	RAATTY	2 cut(s)	930, 1165
ArsI	GACNNNNNNTTYG	4 cut(s)	458, 490, 797, 829
AspLEI	GCGC	7 cut(s)	354, 632, 658, 660, 788, 830, 1302
AspS9I	GGNCC	8 cut(s)	130, 143, 358, 844, 998, 1321, 1344, 1345
AsuC2I	CCSGG	1 cut(s)	964
AsuHPI	GGTGA	5 cut(s)	292, 577, 709, 1156, 1304
AvaI	CYCGRG	3 cut(s)	347, 355, 362
AvaII	GGWCC	3 cut(s)	130, 844, 1321
BaeGI	GKGCMC	1 cut(s)	1348
BanI	GGYRCC	1 cut(s)	785
BanII	GRGCYC	3 cut(s)	447, 492, 1348
BbsI	GAAGAC	2 cut(s)	488, 915
Bbv12I	GWGCWC	4 cut(s)	336, 447, 1116, 1188
BbvI	GCAGC	4 cut(s)	611, 639, 996, 1143
BccI	CCATC	6 cut(s)	113, 556, 772, 946, 1332, 1335
BceAI	ACGGC	2 cut(s)	532, 1066
BciT130I	CCWGG	2 cut(s)	671, 1349
BclI	TGATCA	1 cut(s)	567
BcnI	CCSGG	1 cut(s)	964
BcoDI	GTCTC	2 cut(s)	365, 416
BfaI	CTAG	1 cut(s)	429
BfmI	CTRYAG	3 cut(s)	526, 625, 1157
BfoI	RGCGCY	3 cut(s)	355, 633, 789
BfuAI	ACCTGC	2 cut(s)	311, 383
BglII	AGATCT	1 cut(s)	946
BisI	GCNGC	8 cut(s)	307, 625, 628, 784, 789, 826, 1010, 1157
BlsI	GCNGC	8 cut(s)	308, 626, 629, 785, 790, 827, 1011, 1158
Bme1390I	CCNGG	3 cut(s)	671, 964, 1349
Bme18I	GGWCC	3 cut(s)	130, 844, 1321
BmeT110I	CYCGRG	3 cut(s)	347, 355, 362
BmgT120I	GGNCC	8 cut(s)	130, 143, 358, 844, 998, 1321, 1344, 1345
BmiI	GGNNCC	4 cut(s)	145, 787, 871, 1346
BmrFI	CCNGG	3 cut(s)	671, 964, 1349
BmrI	ACTGGG	1 cut(s)	495
BmsI	GCATC	3 cut(s)	685, 741, 1131
BmuI	ACTGGG	1 cut(s)	495
BpiI	GAAGAC	2 cut(s)	488, 915
BpmI	CTGGAG	2 cut(s)	146, 653
BpuEI	CTTGAG	3 cut(s)	26, 143, 476
BpuMI	CCSGG	1 cut(s)	964
Bsa29I	ATCGAT	2 cut(s)	507, 648
BsaBI	GATNNNNATC	1 cut(s)	566
BsaHI	GRCGYC	4 cut(s)	545, 786, 1016, 1196
BsaI	GGTCTC	2 cut(s)	365, 416
BsaJI	CCNNGG	8 cut(s)	139, 361, 417, 462, 733, 963, 1347, 1348
BsaWI	WCCGGW	2 cut(s)	295, 774
Bsc4I	CCNNNNNNNGG	6 cut(s)	109, 127, 367, 385, 418, 670
Bse118I	RCCGGY	1 cut(s)	1012
Bse1I	ACTGG	3 cut(s)	64, 129, 490
Bse8I	GATNNNNATC	1 cut(s)	566
BseAI	TCCGGA	1 cut(s)	774
BseBI	CCWGG	2 cut(s)	671, 1349
BseCI	ATCGAT	2 cut(s)	507, 648
BseDI	CCNNGG	8 cut(s)	139, 361, 417, 462, 733, 963, 1347, 1348
BseGI	GGATG	7 cut(s)	99, 676, 783, 1122, 1209, 1287, 1346
BseJI	GATNNNNATC	1 cut(s)	566
BseLI	CCNNNNNNNGG	6 cut(s)	109, 127, 367, 385, 418, 670
BseNI	ACTGG	3 cut(s)	64, 129, 490
BsePI	GCGCGC	1 cut(s)	656
BseRI	GAGGAG	4 cut(s)	196, 383, 656, 746
BseSI	GKGCMC	1 cut(s)	1348
BseX3I	CGGCCG	1 cut(s)	1051
BseXI	GCAGC	4 cut(s)	611, 639, 996, 1143
BsgI	GTGCAG	1 cut(s)	1196
Bsh1236I	CGCG	7 cut(s)	309, 658, 660, 692, 828, 1130, 1302
Bsh1285I	CGRYCG	4 cut(s)	260, 648, 996, 1054
BshFI	GGCC	7 cut(s)	113, 144, 360, 636, 999, 1053, 1346
BshNI	GGYRCC	1 cut(s)	785
BshVI	ATCGAT	2 cut(s)	507, 648
BsiEI	CGRYCG	4 cut(s)	260, 648, 996, 1054
BsiHKAI	GWGCWC	4 cut(s)	336, 447, 1116, 1188
BsiHKCI	CYCGRG	3 cut(s)	347, 355, 362
BsiSI	CCGG	9 cut(s)	17, 114, 296, 386, 615, 775, 963, 1013, 1054
BslFI	GGGAC	2 cut(s)	182, 296
BslI	CCNNNNNNNGG	6 cut(s)	109, 127, 367, 385, 418, 670
BsmAI	GTCTC	2 cut(s)	365, 416
BsmFI	GGGAC	2 cut(s)	182, 296
BsnI	GGCC	7 cut(s)	113, 144, 360, 636, 999, 1053, 1346
Bso31I	GGTCTC	2 cut(s)	365, 416
BsoBI	CYCGRG	3 cut(s)	347, 355, 362
Bsp120I	GGGCCC	1 cut(s)	1344
Bsp1286I	GDGCHC	6 cut(s)	336, 447, 492, 1116, 1188, 1348
Bsp13I	TCCGGA	1 cut(s)	774
Bsp143I	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
Bsp19I	CCATGG	2 cut(s)	417, 462
BspANI	GGCC	7 cut(s)	113, 144, 360, 636, 999, 1053, 1346
BspDI	ATCGAT	2 cut(s)	507, 648
BspEI	TCCGGA	1 cut(s)	774
BspFNI	CGCG	7 cut(s)	309, 658, 660, 692, 828, 1130, 1302
BspLI	GGNNCC	4 cut(s)	145, 787, 871, 1346
BspMAI	CTGCAG	2 cut(s)	629, 1161
BspMI	ACCTGC	2 cut(s)	311, 383
BspPI	GGATC	1 cut(s)	337
BspT107I	GGYRCC	1 cut(s)	785
BspTNI	GGTCTC	2 cut(s)	365, 416
BsrFI	RCCGGY	1 cut(s)	1012
BsrI	ACTGG	3 cut(s)	64, 129, 490
BssAI	RCCGGY	1 cut(s)	1012
BssECI	CCNNGG	8 cut(s)	139, 361, 417, 462, 733, 963, 1347, 1348
BssHII	GCGCGC	1 cut(s)	656
BssMI	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
BssNI	GRCGYC	4 cut(s)	545, 786, 1016, 1196
BssT1I	CCWWGG	3 cut(s)	417, 462, 733
Bst2UI	CCWGG	2 cut(s)	671, 1349
Bst4CI	ACNGT	2 cut(s)	235, 527
Bst6I	CTCTTC	3 cut(s)	539, 776, 1043
BstACI	GRCGYC	4 cut(s)	545, 786, 1016, 1196
BstAPI	GCANNNNNTGC	1 cut(s)	624
BstC8I	GCNNGC	5 cut(s)	634, 658, 1001, 1014, 1132
BstDSI	CCRYGG	2 cut(s)	417, 462
BstEII	GGTNACC	1 cut(s)	298
BstENI	CCTNNNNNAGG	3 cut(s)	125, 365, 668
BstF5I	GGATG	7 cut(s)	99, 676, 783, 1122, 1209, 1287, 1346
BstFNI	CGCG	7 cut(s)	309, 658, 660, 692, 828, 1130, 1302
BstH2I	RGCGCY	3 cut(s)	355, 633, 789
BstHHI	GCGC	7 cut(s)	354, 632, 658, 660, 788, 830, 1302
BstKTI	GATC	8 cut(s)	260, 345, 570, 648, 714, 949, 996, 1149
BstMAI	GTCTC	2 cut(s)	365, 416
BstMBI	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
BstMCI	CGRYCG	4 cut(s)	260, 648, 996, 1054
BstMWI	GCNNNNNNNGC	5 cut(s)	160, 624, 633, 968, 1009
BstNI	CCWGG	2 cut(s)	671, 1349
BstPI	GGTNACC	1 cut(s)	298
BstSCI	CCNGG	3 cut(s)	669, 962, 1347
BstSFI	CTRYAG	3 cut(s)	526, 625, 1157
BstSLI	GKGCMC	1 cut(s)	1348
BstUI	CGCG	7 cut(s)	309, 658, 660, 692, 828, 1130, 1302
BstV1I	GCAGC	4 cut(s)	611, 639, 996, 1143
BstV2I	GAAGAC	2 cut(s)	488, 915
BstX2I	RGATCY	1 cut(s)	946
BstXI	CCANNNNNNTGG	1 cut(s)	328
BstYI	RGATCY	1 cut(s)	946
BstZI	CGGCCG	1 cut(s)	1051
Bsu15I	ATCGAT	2 cut(s)	507, 648
BsuRI	GGCC	7 cut(s)	113, 144, 360, 636, 999, 1053, 1346
BsuTUI	ATCGAT	2 cut(s)	507, 648
BtgI	CCRYGG	2 cut(s)	417, 462
BtgZI	GCGATG	3 cut(s)	211, 575, 764
BtsCI	GGATG	7 cut(s)	99, 676, 783, 1122, 1209, 1287, 1346
BtsI	GCAGTG	2 cut(s)	1186, 1208
BtsIMutI	CAGTG	2 cut(s)	1186, 1208
BveI	ACCTGC	2 cut(s)	311, 383
Cac8I	GCNNGC	5 cut(s)	634, 658, 1001, 1014, 1132
CaiI	CAGNNNCTG	1 cut(s)	1030
CfoI	GCGC	7 cut(s)	354, 632, 658, 660, 788, 830, 1302
Cfr10I	RCCGGY	1 cut(s)	1012
Cfr13I	GGNCC	8 cut(s)	130, 143, 358, 844, 998, 1321, 1344, 1345
ClaI	ATCGAT	2 cut(s)	507, 648
CseI	GACGC	4 cut(s)	298, 553, 1005, 1185
Csp6I	GTAC	5 cut(s)	67, 577, 1084, 1249, 1261
CviAII	CATG	5 cut(s)	109, 328, 418, 463, 619
CviQI	GTAC	5 cut(s)	67, 577, 1084, 1249, 1261
DinI	GGCGCC	1 cut(s)	787
DpnI	GATC	8 cut(s)	259, 344, 569, 647, 713, 948, 995, 1148
DpnII	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
EaeI	YGGCCR	2 cut(s)	111, 1051
EagI	CGGCCG	1 cut(s)	1051
Eam1104I	CTCTTC	3 cut(s)	539, 776, 1043
EarI	CTCTTC	3 cut(s)	539, 776, 1043
EciI	GGCGGA	6 cut(s)	125, 393, 448, 455, 1149, 1196
Ecl136II	GAGCTC	1 cut(s)	445
EclXI	CGGCCG	1 cut(s)	1051
Eco130I	CCWWGG	3 cut(s)	417, 462, 733
Eco24I	GRGCYC	3 cut(s)	447, 492, 1348
Eco31I	GGTCTC	2 cut(s)	365, 416
Eco47I	GGWCC	3 cut(s)	130, 844, 1321
Eco47III	AGCGCT	2 cut(s)	353, 631
Eco52I	CGGCCG	1 cut(s)	1051
Eco53kI	GAGCTC	1 cut(s)	445
Eco88I	CYCGRG	3 cut(s)	347, 355, 362
Eco91I	GGTNACC	1 cut(s)	298
EcoICRI	GAGCTC	1 cut(s)	445
EcoNI	CCTNNNNNAGG	3 cut(s)	125, 365, 668
EcoO109I	RGGNCCY	2 cut(s)	130, 1345
EcoO65I	GGTNACC	1 cut(s)	298
EcoRII	CCWGG	2 cut(s)	669, 1347
EcoT14I	CCWWGG	3 cut(s)	417, 462, 733
EcoT38I	GRGCYC	3 cut(s)	447, 492, 1348
EgeI	GGCGCC	1 cut(s)	787
EheI	GGCGCC	1 cut(s)	787
ErhI	CCWWGG	3 cut(s)	417, 462, 733
FaeI	CATG	5 cut(s)	112, 331, 421, 466, 622
FaiI	YATR	8 cut(s)	48, 110, 245, 329, 419, 464, 620, 888
FaqI	GGGAC	2 cut(s)	182, 296
FatI	CATG	5 cut(s)	108, 327, 417, 462, 618
FauI	CCCGC	2 cut(s)	1008, 1123
FbaI	TGATCA	1 cut(s)	567
FblI	GTMKAC	3 cut(s)	237, 264, 273
Fnu4HI	GCNGC	8 cut(s)	307, 625, 628, 784, 789, 826, 1010, 1157
FokI	GGATG	6 cut(s)	86, 663, 790, 1109, 1216, 1294
FriOI	GRGCYC	3 cut(s)	447, 492, 1348
Fsp4HI	GCNGC	8 cut(s)	307, 625, 628, 784, 789, 826, 1010, 1157
FspBI	CTAG	1 cut(s)	429
GlaI	GCGC	7 cut(s)	353, 631, 657, 659, 787, 829, 1301
GluI	GCNGC	8 cut(s)	307, 625, 628, 784, 789, 826, 1010, 1157
GsuI	CTGGAG	2 cut(s)	146, 653
HaeII	RGCGCY	3 cut(s)	355, 633, 789
HaeIII	GGCC	7 cut(s)	113, 144, 360, 636, 999, 1053, 1346
HapII	CCGG	9 cut(s)	17, 114, 296, 386, 615, 775, 963, 1013, 1054
HgaI	GACGC	4 cut(s)	298, 553, 1005, 1185
HhaI	GCGC	7 cut(s)	354, 632, 658, 660, 788, 830, 1302
Hin1I	GRCGYC	4 cut(s)	545, 786, 1016, 1196
Hin1II	CATG	5 cut(s)	112, 331, 421, 466, 622
Hin6I	GCGC	7 cut(s)	352, 630, 656, 658, 786, 828, 1300
HinP1I	GCGC	7 cut(s)	352, 630, 656, 658, 786, 828, 1300
HincII	GTYRAC	3 cut(s)	76, 274, 523
HindII	GTYRAC	3 cut(s)	76, 274, 523
HinfI	GANTC	4 cut(s)	117, 170, 391, 467
HpaI	GTTAAC	1 cut(s)	523
HpaII	CCGG	9 cut(s)	17, 114, 296, 386, 615, 775, 963, 1013, 1054
HphI	GGTGA	5 cut(s)	292, 577, 709, 1156, 1304
Hpy166II	GTNNAC	6 cut(s)	76, 238, 265, 274, 523, 847
Hpy188I	TCNGA	7 cut(s)	587, 817, 951, 1021, 1100, 1321, 1340
Hpy188III	TCNNGA	5 cut(s)	478, 598, 775, 1063, 1091
Hpy8I	GTNNAC	6 cut(s)	76, 238, 265, 274, 523, 847
HpyAV	CCTTC	5 cut(s)	325, 334, 911, 1131, 1267
HpyCH4III	ACNGT	2 cut(s)	235, 527
HpyCH4IV	ACGT	4 cut(s)	240, 849, 1229, 1335
HpyCH4V	TGCA	6 cut(s)	627, 676, 1122, 1159, 1213, 1315
HpyF10VI	GCNNNNNNNGC	5 cut(s)	160, 624, 633, 968, 1009
HpySE526I	ACGT	4 cut(s)	240, 849, 1229, 1335
Hsp92I	GRCGYC	4 cut(s)	545, 786, 1016, 1196
Hsp92II	CATG	5 cut(s)	112, 331, 421, 466, 622
HspAI	GCGC	7 cut(s)	352, 630, 656, 658, 786, 828, 1300
KasI	GGCGCC	1 cut(s)	785
Kpn2I	TCCGGA	1 cut(s)	774
KroI	GCCGGC	1 cut(s)	1012
KroNI	GCCGGC	1 cut(s)	1014
Ksp22I	TGATCA	1 cut(s)	567
KspAI	GTTAAC	1 cut(s)	523
Kzo9I	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
LmnI	GCTCC	8 cut(s)	209, 331, 442, 588, 759, 869, 1021, 1183
Lsp1109I	GCAGC	4 cut(s)	611, 639, 996, 1143
LweI	GCATC	3 cut(s)	685, 741, 1131
MaeI	CTAG	1 cut(s)	429
MaeII	ACGT	4 cut(s)	240, 849, 1229, 1335
MaeIII	GTNAC	1 cut(s)	298
MalI	GATC	8 cut(s)	259, 344, 569, 647, 713, 948, 995, 1148
MboI	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
MboII	GAAGA	8 cut(s)	445, 493, 526, 763, 917, 920, 1030, 1174
MflI	RGATCY	1 cut(s)	946
MhlI	GDGCHC	6 cut(s)	336, 447, 492, 1116, 1188, 1348
MluCI	AATT	2 cut(s)	930, 1165
Mly113I	GGCGCC	1 cut(s)	786
MlyI	GAGTC	2 cut(s)	164, 461
MmeI	TCCRAC	5 cut(s)	51, 840, 907, 999, 1318
MroI	TCCGGA	1 cut(s)	774
MroNI	GCCGGC	1 cut(s)	1012
MseI	TTAA	1 cut(s)	522
MslI	CAYNNNNRTG	1 cut(s)	326
MspA1I	CMGCKG	2 cut(s)	1003, 1174
MspI	CCGG	9 cut(s)	17, 114, 296, 386, 615, 775, 963, 1013, 1054
MspR9I	CCNGG	3 cut(s)	671, 964, 1349
MvaI	CCWGG	2 cut(s)	671, 1349
MvnI	CGCG	7 cut(s)	309, 658, 660, 692, 828, 1130, 1302
MwoI	GCNNNNNNNGC	5 cut(s)	160, 624, 633, 968, 1009
NaeI	GCCGGC	1 cut(s)	1014
NarI	GGCGCC	1 cut(s)	786
NciI	CCSGG	1 cut(s)	964
NcoI	CCATGG	2 cut(s)	417, 462
NdeII	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
NgoMIV	GCCGGC	1 cut(s)	1012
NlaIII	CATG	5 cut(s)	112, 331, 421, 466, 622
NlaIV	GGNNCC	4 cut(s)	145, 787, 871, 1346
NmeAIII	GCCGAG	3 cut(s)	36, 120, 536
NmuCI	GTSAC	1 cut(s)	298
PaeR7I	CTCGAG	1 cut(s)	347
PaqCI	CACCTGC	1 cut(s)	311
PasI	CCCWGGG	1 cut(s)	1348
PauI	GCGCGC	1 cut(s)	656
PcsI	WCGNNNNNNNCGW	6 cut(s)	147, 545, 557, 696, 705, 1235
PdiI	GCCGGC	1 cut(s)	1014
PfeI	GAWTC	2 cut(s)	117, 391
PflFI	GACNNNGTC	1 cut(s)	547
PkrI	GCNGC	8 cut(s)	308, 626, 629, 785, 790, 827, 1011, 1158
Ple19I	CGATCG	3 cut(s)	260, 648, 996
PleI	GAGTC	2 cut(s)	164, 461
PluTI	GGCGCC	1 cut(s)	789
PpsI	GAGTC	2 cut(s)	164, 461
PpuMI	RGGWCCY	1 cut(s)	130
Psp124BI	GAGCTC	1 cut(s)	447
Psp5II	RGGWCCY	1 cut(s)	130
Psp6I	CCWGG	2 cut(s)	669, 1347
PspEI	GGTNACC	1 cut(s)	298
PspGI	CCWGG	2 cut(s)	669, 1347
PspN4I	GGNNCC	4 cut(s)	145, 787, 871, 1346
PspOMI	GGGCCC	1 cut(s)	1344
PspPI	GGNCC	8 cut(s)	130, 143, 358, 844, 998, 1321, 1344, 1345
PspPPI	RGGWCCY	1 cut(s)	130
PspXI	VCTCGAGB	1 cut(s)	347
PstI	CTGCAG	2 cut(s)	629, 1161
PstNI	CAGNNNCTG	1 cut(s)	1030
PsuI	RGATCY	1 cut(s)	946
PsyI	GACNNNGTC	1 cut(s)	547
PteI	GCGCGC	1 cut(s)	656
PvuI	CGATCG	3 cut(s)	260, 648, 996
PvuII	CAGCTG	1 cut(s)	1174
RsaI	GTAC	5 cut(s)	68, 578, 1085, 1250, 1262
RsaNI	GTAC	5 cut(s)	67, 577, 1084, 1249, 1261
RseI	CAYNNNNRTG	1 cut(s)	326
SacI	GAGCTC	1 cut(s)	447
SalI	GTCGAC	1 cut(s)	272
SaqAI	TTAA	1 cut(s)	522
SatI	GCNGC	8 cut(s)	307, 625, 628, 784, 789, 826, 1010, 1157
Sau3AI	GATC	8 cut(s)	257, 342, 567, 645, 711, 946, 993, 1146
Sau96I	GGNCC	8 cut(s)	130, 143, 358, 844, 998, 1321, 1344, 1345
SchI	GAGTC	2 cut(s)	164, 461
ScrFI	CCNGG	3 cut(s)	671, 964, 1349
SduI	GDGCHC	6 cut(s)	336, 447, 492, 1116, 1188, 1348
SfaNI	GCATC	3 cut(s)	685, 741, 1131
SfcI	CTRYAG	3 cut(s)	526, 625, 1157
SfoI	GGCGCC	1 cut(s)	787
Sfr274I	CTCGAG	1 cut(s)	347
SinI	GGWCC	3 cut(s)	130, 844, 1321
SlaI	CTCGAG	1 cut(s)	347
SmiMI	CAYNNNNRTG	1 cut(s)	326
SmlI	CTYRAG	4 cut(s)	41, 158, 347, 491
SmoI	CTYRAG	4 cut(s)	41, 158, 347, 491
Sse9I	AATT	2 cut(s)	930, 1165
SspDI	GGCGCC	1 cut(s)	785
SspMI	CTAG	1 cut(s)	429
SstI	GAGCTC	1 cut(s)	447
StyD4I	CCNGG	3 cut(s)	669, 962, 1347
StyI	CCWWGG	3 cut(s)	417, 462, 733
TaaI	ACNGT	2 cut(s)	235, 527
TaiI	ACGT	4 cut(s)	243, 852, 1232, 1338
TaqII	GACCGA	1 cut(s)	250
TasI	AATT	2 cut(s)	930, 1165
TatI	WGTACW	1 cut(s)	576
TauI	GCSGC	4 cut(s)	309, 786, 791, 828
TfiI	GAWTC	2 cut(s)	117, 391
Tru1I	TTAA	1 cut(s)	522
Tru9I	TTAA	1 cut(s)	522
TscAI	CASTG	2 cut(s)	1193, 1215
TseFI	GTSAC	1 cut(s)	298
TseI	GCWGC	4 cut(s)	624, 627, 1009, 1156
Tsp45I	GTSAC	1 cut(s)	298
TspDTI	ATGAA	3 cut(s)	214, 316, 1298
TspGWI	ACGGA	1 cut(s)	22
TspRI	CASTG	2 cut(s)	1193, 1215
Tth111I	GACNNNGTC	1 cut(s)	547
VpaK11BI	GGWCC	3 cut(s)	130, 844, 1321
XagI	CCTNNNNNAGG	3 cut(s)	125, 365, 668
XapI	RAATTY	2 cut(s)	930, 1165
XcmI	CCANNNNNNNNNTGG	1 cut(s)	415
XhoI	CTCGAG	1 cut(s)	347
XmiI	GTMKAC	3 cut(s)	237, 264, 273
XspI	CTAG	1 cut(s)	429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.