Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0013829

Physical Location & Seq

Genomic Coordinates Reverse (-)

2317817 .. 2319082

Gene Structure 1266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g03740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1266 bp

ATGCCTCCAATCTTGCAGGACTTCTCCAACTCCGTCAAGCTCAAGTATGTCAAGCTCGGCTACCAGTACCTCGTCAACCACATTCTCACCCTCACTCTCATCCCCATCATGGCCGGTATCCTCCTGGAGGTCCTCCGCCTTGGCCCCGACGAGCTTCTCAAGCTCTGGGACTCCCTCCACTTCGACCTCGTCCAAATCCTATGCTCCTCCTTCCTCATCATCTTCATCGCCACGGTCTACTTCATGTCCAAACCCCGCCCCATCTACCTTGTTGACTACGCCTGCTTCAAACCTCCGGTCACTTGCCGCGTTCCGTTCTCCACCTTCATGGAGCATTCCCGCCTCATCCTCAGCAACAACCCTAAGAGCGTCGAGTTCCAGATGAGGATCCTCGAGCGCTCGGGCCTCGGCGAGGAGACCTGCCTCCCTCCGGCAATCCACTACATTCCGCCCAACCCCACCATGGAGGCCGCTAGGGGCGAGGCGGAGCTCGTCATCTTCTCCGCCATGGACTCTCTGTTCGAGAAAACGGGGCTTAAACCCAAAGACATCGATATTCTTATCGTCAATTGCAGCCTCTTCTCGCCGACGCCGTCTCTCTCGGCGATGGTGATCAACAAATACAAGCTGAGGAGCAACATCAAGAGCTTCAACCTCTCCGGTATGGGCTGCAGCGCCGGCCTCATCTCAATCGATTTGGCGCGCGACCTCCTCCAGGTGCATCCCAACTCCAACGCGGTTGTCGTCAGCACCGAGATCATCACCCCGAACTATTACCAAGGCAATGAGAGGGCGATGCTCCTCCCCAACTGCCTCTTCCGGATGGGAGGCGCCGCCTTGCTTTTATCGAACAGGAGGTCCGAGCACCGCCGCGCCAAGTATCGATTGGTCCACGTAGTCCGGACCCACAAAGGAGCCGACGACAAGGCGTATAAGTGCGTGTTCGAAGAAGAGGACAAGGAGGGCAAAGTTGGAATTTCGCTCTCTAAAGATCTGATGGCAATTGCGGGGGAAGCGCTGAAATCGAACATCACGACGATCGGGCCGCTGGTGCTGCCAGCGTCGGAGCAGTTGCTGTTTCTCTTCACGCTCATCGGGCGGAAAATCTTGAACCCGAAATGGAAGCCCTACATTCCAGATTTCCGACTGGCGTTCGAGCACTTCTGCATCCACGCGGGCGGGAGAGCAGTGATCGATCCTCGAGCTGCAGAAGAATTTACAGCTGTCGGCGGAGCACTGCGAGGCGTCGAGGATGACGCTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009653 GO:0009826 GO:0009856 GO:0009922 GO:0009987 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016740 GO:0016746 GO:0016747 GO:0022414 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0051704 GO:0060560 GO:0071704 GO:0071840 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

422

Amino Acids

46.96

Weight (kDa)

8.46

Isoelectric Point (pI)

39.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAE1_CUT1_RppA	PF08392	80 - 368	3.5e-139	FAE1/Type III polyketide synthase-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013829)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25450 AT1G68530
fragaria_vesca	FvH4_4g27420
malus_domestica	MD13G1042400.v1.1 MD16G1043300.v1.1
prunus_persica	Prupe.1G310500_v2.0.a1
pyrus_communis	pycom13g03670 pycom13g03690 pycom16g03740
rosa_chinensis	RchiOBHm_Chr4g0435241
rosa_laevigata	RLG00000006606
rosa_multiflora	Rmu_ssc0000339.1_g000014
rosa_roxburghii	Rroxscaffold_5G00376470
rosa_rugosa	Rorug04G0283600
rosa_samantha	Rh4AG339100 Rh4DG341700
rosa_wichuraiana	Rw4G029580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	428
AccB1I	GGYRCC	1 cut(s)	830
AccI	GTMKAC	1 cut(s)	237
AccII	CGCG	6 cut(s)	309, 703, 705, 737, 873, 1175
AccIII	TCCGGA	2 cut(s)	819, 900
AclWI	GGATC	3 cut(s)	382, 395, 1190
AcoI	YGGCCR	1 cut(s)	111
AcsI	RAATTY	2 cut(s)	975, 1214
AcyI	GRCGYC	3 cut(s)	590, 831, 1245
AfaI	GTAC	1 cut(s)	68
AfeI	AGCGCT	2 cut(s)	398, 1017
AfiI	CCNNNNNNNGG	6 cut(s)	109, 127, 412, 430, 463, 715
AgsI	TTSAA	3 cut(s)	289, 652, 1111
AjnI	CCWGG	2 cut(s)	123, 714
AjuI	GAANNNNNNNTTGG	2 cut(s)	800, 832
AloI	GAACNNNNNNTCC	4 cut(s)	503, 535, 842, 874
AluBI	AGCT	9 cut(s)	40, 55, 154, 163, 490, 628, 648, 1205, 1223
AluI	AGCT	9 cut(s)	40, 55, 154, 163, 490, 628, 648, 1205, 1223
Alw21I	GWGCWC	4 cut(s)	492, 867, 1161, 1237
Alw26I	GTCTC	2 cut(s)	410, 600
AlwI	GGATC	3 cut(s)	382, 395, 1190
AlwNI	CAGNNNCTG	1 cut(s)	1075
Ama87I	CYCGRG	3 cut(s)	392, 400, 1200
Aor13HI	TCCGGA	2 cut(s)	819, 900
Aor51HI	AGCGCT	2 cut(s)	398, 1017
AoxI	GGCC	6 cut(s)	111, 142, 403, 468, 679, 1043
ApeKI	GCWGC	6 cut(s)	573, 669, 672, 1054, 1205, 1259
ApoI	RAATTY	2 cut(s)	975, 1214
ArsI	GACNNNNNNTTYG	6 cut(s)	282, 314, 503, 535, 842, 874
AspLEI	GCGC	7 cut(s)	399, 677, 703, 705, 833, 875, 1018
AspS9I	GGNCC	7 cut(s)	130, 143, 403, 858, 889, 903, 1043
AsuHPI	GGTGA	3 cut(s)	79, 622, 754
AsuII	TTCGAA	1 cut(s)	945
AvaI	CYCGRG	3 cut(s)	392, 400, 1200
AvaII	GGWCC	4 cut(s)	130, 858, 889, 903
BamHI	GGATCC	1 cut(s)	387
BanI	GGYRCC	1 cut(s)	830
BanII	GRGCYC	1 cut(s)	492
Bbv12I	GWGCWC	4 cut(s)	492, 867, 1161, 1237
BbvCI	CCTCAGC	2 cut(s)	350, 629
BbvI	GCAGC	6 cut(s)	585, 656, 684, 1041, 1192, 1246
BccI	CCATC	5 cut(s)	113, 269, 601, 817, 991
BceAI	ACGGC	1 cut(s)	577
BciT130I	CCWGG	2 cut(s)	125, 716
BciVI	GTATCC	1 cut(s)	128
BclI	TGATCA	1 cut(s)	612
BcoDI	GTCTC	2 cut(s)	410, 600
BfaI	CTAG	1 cut(s)	474
BfmI	CTRYAG	2 cut(s)	670, 1206
BfoI	RGCGCY	4 cut(s)	400, 678, 834, 1019
BfuAI	ACCTGC	1 cut(s)	428
BfuI	GTATCC	1 cut(s)	128
BglII	AGATCT	1 cut(s)	991
Bme1390I	CCNGG	2 cut(s)	125, 716
Bme18I	GGWCC	4 cut(s)	130, 858, 889, 903
BmeT110I	CYCGRG	3 cut(s)	392, 400, 1200
BmgT120I	GGNCC	7 cut(s)	130, 143, 403, 858, 889, 903, 1043
BmiI	GGNNCC	5 cut(s)	145, 389, 832, 905, 916
BmrFI	CCNGG	2 cut(s)	125, 716
BmsI	GCATC	3 cut(s)	730, 786, 1176
BpmI	CTGGAG	2 cut(s)	146, 698
Bpu10I	CCTNAGC	2 cut(s)	350, 629
Bpu14I	TTCGAA	1 cut(s)	945
BpuEI	CTTGAG	2 cut(s)	26, 143
Bsa29I	ATCGAT	4 cut(s)	552, 693, 883, 1194
BsaAI	YACGTR	1 cut(s)	895
BsaBI	GATNNNNATC	2 cut(s)	386, 611
BsaHI	GRCGYC	3 cut(s)	590, 831, 1245
BsaI	GGTCTC	1 cut(s)	410
BsaJI	CCNNGG	6 cut(s)	139, 231, 406, 462, 507, 778
BsaWI	WCCGGW	4 cut(s)	295, 659, 819, 900
Bsc4I	CCNNNNNNNGG	6 cut(s)	109, 127, 412, 430, 463, 715
Bse118I	RCCGGY	2 cut(s)	113, 677
Bse1I	ACTGG	2 cut(s)	64, 1152
Bse3DI	GCAATG	1 cut(s)	790
Bse8I	GATNNNNATC	2 cut(s)	386, 611
BseAI	TCCGGA	2 cut(s)	819, 900
BseBI	CCWGG	2 cut(s)	125, 716
BseCI	ATCGAT	4 cut(s)	552, 693, 883, 1194
BseDI	CCNNGG	6 cut(s)	139, 231, 406, 462, 507, 778
BseGI	GGATG	6 cut(s)	99, 345, 721, 828, 1167, 1258
BseJI	GATNNNNATC	2 cut(s)	386, 611
BseLI	CCNNNNNNNGG	6 cut(s)	109, 127, 412, 430, 463, 715
BseMI	GCAATG	1 cut(s)	790
BseMII	CTCAG	2 cut(s)	364, 620
BseNI	ACTGG	2 cut(s)	64, 1152
BsePI	GCGCGC	1 cut(s)	701
BseRI	GAGGAG	5 cut(s)	196, 428, 646, 701, 791
BseXI	GCAGC	6 cut(s)	585, 656, 684, 1041, 1192, 1246
Bsh1236I	CGCG	6 cut(s)	309, 703, 705, 737, 873, 1175
Bsh1285I	CGRYCG	1 cut(s)	1041
BshFI	GGCC	6 cut(s)	113, 144, 405, 470, 681, 1045
BshNI	GGYRCC	1 cut(s)	830
BshVI	ATCGAT	4 cut(s)	552, 693, 883, 1194
BsiEI	CGRYCG	1 cut(s)	1041
BsiHKAI	GWGCWC	4 cut(s)	492, 867, 1161, 1237
BsiHKCI	CYCGRG	3 cut(s)	392, 400, 1200
BsiSI	CCGG	7 cut(s)	114, 296, 431, 660, 678, 820, 901
BslFI	GGGAC	1 cut(s)	182
BslI	CCNNNNNNNGG	6 cut(s)	109, 127, 412, 430, 463, 715
BsmAI	GTCTC	2 cut(s)	410, 600
BsmBI	CGTCTC	1 cut(s)	600
BsmFI	GGGAC	1 cut(s)	182
BsmI	GAATGC	1 cut(s)	334
BsnI	GGCC	6 cut(s)	113, 144, 405, 470, 681, 1045
Bso31I	GGTCTC	1 cut(s)	410
BsoBI	CYCGRG	3 cut(s)	392, 400, 1200
Bsp119I	TTCGAA	1 cut(s)	945
Bsp1286I	GDGCHC	4 cut(s)	492, 867, 1161, 1237
Bsp13I	TCCGGA	2 cut(s)	819, 900
Bsp143I	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
Bsp19I	CCATGG	2 cut(s)	462, 507
BspANI	GGCC	6 cut(s)	113, 144, 405, 470, 681, 1045
BspCNI	CTCAG	2 cut(s)	363, 621
BspDI	ATCGAT	4 cut(s)	552, 693, 883, 1194
BspEI	TCCGGA	2 cut(s)	819, 900
BspFNI	CGCG	6 cut(s)	309, 703, 705, 737, 873, 1175
BspLI	GGNNCC	5 cut(s)	145, 389, 832, 905, 916
BspMAI	CTGCAG	2 cut(s)	674, 1210
BspMI	ACCTGC	1 cut(s)	428
BspPI	GGATC	3 cut(s)	382, 395, 1190
BspT104I	TTCGAA	1 cut(s)	945
BspT107I	GGYRCC	1 cut(s)	830
BspTNI	GGTCTC	1 cut(s)	410
BsrDI	GCAATG	1 cut(s)	790
BsrFI	RCCGGY	2 cut(s)	113, 677
BsrI	ACTGG	2 cut(s)	64, 1152
BssAI	RCCGGY	2 cut(s)	113, 677
BssECI	CCNNGG	6 cut(s)	139, 231, 406, 462, 507, 778
BssHII	GCGCGC	1 cut(s)	701
BssMI	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
BssNI	GRCGYC	3 cut(s)	590, 831, 1245
BssT1I	CCWWGG	4 cut(s)	139, 462, 507, 778
Bst2UI	CCWGG	2 cut(s)	125, 716
Bst4CI	ACNGT	1 cut(s)	235
Bst6I	CTCTTC	4 cut(s)	584, 821, 945, 1088
BstACI	GRCGYC	3 cut(s)	590, 831, 1245
BstBAI	YACGTR	1 cut(s)	895
BstBI	TTCGAA	1 cut(s)	945
BstC8I	GCNNGC	5 cut(s)	283, 679, 703, 1059, 1177
BstDEI	CTNAG	3 cut(s)	350, 363, 629
BstDSI	CCRYGG	3 cut(s)	231, 462, 507
BstENI	CCTNNNNNAGG	3 cut(s)	125, 410, 713
BstF5I	GGATG	6 cut(s)	99, 345, 721, 828, 1167, 1258
BstFNI	CGCG	6 cut(s)	309, 703, 705, 737, 873, 1175
BstH2I	RGCGCY	4 cut(s)	400, 678, 834, 1019
BstHHI	GCGC	7 cut(s)	399, 677, 703, 705, 833, 875, 1018
BstKTI	GATC	7 cut(s)	390, 615, 759, 994, 1041, 1194, 1198
BstMAI	GTCTC	2 cut(s)	410, 600
BstMBI	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
BstMCI	CGRYCG	1 cut(s)	1041
BstMWI	GCNNNNNNNGC	6 cut(s)	160, 678, 1013, 1051, 1054, 1096
BstNI	CCWGG	2 cut(s)	125, 716
BstSCI	CCNGG	2 cut(s)	123, 714
BstSFI	CTRYAG	2 cut(s)	670, 1206
BstUI	CGCG	6 cut(s)	309, 703, 705, 737, 873, 1175
BstV1I	GCAGC	6 cut(s)	585, 656, 684, 1041, 1192, 1246
BstX2I	RGATCY	2 cut(s)	387, 991
BstXI	CCANNNNNNTGG	1 cut(s)	328
BstYI	RGATCY	2 cut(s)	387, 991
Bsu15I	ATCGAT	4 cut(s)	552, 693, 883, 1194
BsuI	GTATCC	1 cut(s)	128
BsuRI	GGCC	6 cut(s)	113, 144, 405, 470, 681, 1045
BsuTUI	ATCGAT	4 cut(s)	552, 693, 883, 1194
BtgI	CCRYGG	3 cut(s)	231, 462, 507
BtgZI	GCGATG	3 cut(s)	211, 620, 809
BtsCI	GGATG	6 cut(s)	99, 345, 721, 828, 1167, 1258
BtsI	GCAGTG	2 cut(s)	1194, 1235
BtsIMutI	CAGTG	2 cut(s)	1194, 1235
BveI	ACCTGC	1 cut(s)	428
Cac8I	GCNNGC	5 cut(s)	283, 679, 703, 1059, 1177
CaiI	CAGNNNCTG	1 cut(s)	1075
CfoI	GCGC	7 cut(s)	399, 677, 703, 705, 833, 875, 1018
Cfr10I	RCCGGY	2 cut(s)	113, 677
Cfr13I	GGNCC	7 cut(s)	130, 143, 403, 858, 889, 903, 1043
ClaI	ATCGAT	4 cut(s)	552, 693, 883, 1194
CseI	GACGC	4 cut(s)	358, 598, 1050, 1234
Csp6I	GTAC	1 cut(s)	67
CviAII	CATG	5 cut(s)	109, 244, 328, 463, 508
CviQI	GTAC	1 cut(s)	67
DdeI	CTNAG	3 cut(s)	350, 363, 629
DinI	GGCGCC	1 cut(s)	832
DpnI	GATC	7 cut(s)	389, 614, 758, 993, 1040, 1193, 1197
DpnII	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
EaeI	YGGCCR	1 cut(s)	111
Eam1104I	CTCTTC	4 cut(s)	584, 821, 945, 1088
EarI	CTCTTC	4 cut(s)	584, 821, 945, 1088
EciI	GGCGGA	6 cut(s)	125, 438, 493, 500, 1114, 1245
Ecl136II	GAGCTC	1 cut(s)	490
Eco130I	CCWWGG	4 cut(s)	139, 462, 507, 778
Eco24I	GRGCYC	1 cut(s)	492
Eco31I	GGTCTC	1 cut(s)	410
Eco47I	GGWCC	4 cut(s)	130, 858, 889, 903
Eco47III	AGCGCT	2 cut(s)	398, 1017
Eco53kI	GAGCTC	1 cut(s)	490
Eco88I	CYCGRG	3 cut(s)	392, 400, 1200
EcoICRI	GAGCTC	1 cut(s)	490
EcoNI	CCTNNNNNAGG	3 cut(s)	125, 410, 713
EcoO109I	RGGNCCY	1 cut(s)	130
EcoRII	CCWGG	2 cut(s)	123, 714
EcoT14I	CCWWGG	4 cut(s)	139, 462, 507, 778
EcoT38I	GRGCYC	1 cut(s)	492
EgeI	GGCGCC	1 cut(s)	832
EheI	GGCGCC	1 cut(s)	832
ErhI	CCWWGG	4 cut(s)	139, 462, 507, 778
Esp3I	CGTCTC	1 cut(s)	600
FaeI	CATG	5 cut(s)	112, 247, 331, 466, 511
FaqI	GGGAC	1 cut(s)	182
FatI	CATG	5 cut(s)	108, 243, 327, 462, 507
FauI	CCCGC	5 cut(s)	263, 347, 1000, 1168, 1172
FbaI	TGATCA	1 cut(s)	612
FblI	GTMKAC	1 cut(s)	237
FokI	GGATG	5 cut(s)	86, 332, 708, 835, 1154
FriOI	GRGCYC	1 cut(s)	492
FspBI	CTAG	1 cut(s)	474
GlaI	GCGC	7 cut(s)	398, 676, 702, 704, 832, 874, 1017
GsuI	CTGGAG	2 cut(s)	146, 698
HaeII	RGCGCY	4 cut(s)	400, 678, 834, 1019
HaeIII	GGCC	6 cut(s)	113, 144, 405, 470, 681, 1045
HapII	CCGG	7 cut(s)	114, 296, 431, 660, 678, 820, 901
HgaI	GACGC	4 cut(s)	358, 598, 1050, 1234
HhaI	GCGC	7 cut(s)	399, 677, 703, 705, 833, 875, 1018
Hin1I	GRCGYC	3 cut(s)	590, 831, 1245
Hin1II	CATG	5 cut(s)	112, 247, 331, 466, 511
Hin6I	GCGC	7 cut(s)	397, 675, 701, 703, 831, 873, 1016
HinP1I	GCGC	7 cut(s)	397, 675, 701, 703, 831, 873, 1016
HincII	GTYRAC	2 cut(s)	76, 274
HindII	GTYRAC	2 cut(s)	76, 274
HinfI	GANTC	2 cut(s)	170, 512
HpaII	CCGG	7 cut(s)	114, 296, 431, 660, 678, 820, 901
HphI	GGTGA	3 cut(s)	79, 622, 754
Hpy166II	GTNNAC	4 cut(s)	76, 238, 274, 892
Hpy188I	TCNGA	4 cut(s)	862, 996, 1066, 1145
Hpy188III	TCNNGA	8 cut(s)	379, 523, 643, 820, 901, 1033, 1108, 1136
Hpy8I	GTNNAC	4 cut(s)	76, 238, 274, 892
Hpy99I	CGWCG	7 cut(s)	152, 374, 592, 923, 1039, 1066, 1250
HpyAV	CCTTC	2 cut(s)	220, 334
HpyCH4III	ACNGT	1 cut(s)	235
HpyCH4IV	ACGT	1 cut(s)	894
HpyCH4V	TGCA	7 cut(s)	16, 573, 672, 721, 1167, 1208, 1262
HpyF10VI	GCNNNNNNNGC	6 cut(s)	160, 678, 1013, 1051, 1054, 1096
HpyF3I	CTNAG	3 cut(s)	350, 363, 629
HpySE526I	ACGT	1 cut(s)	894
Hsp92I	GRCGYC	3 cut(s)	590, 831, 1245
Hsp92II	CATG	5 cut(s)	112, 247, 331, 466, 511
HspAI	GCGC	7 cut(s)	397, 675, 701, 703, 831, 873, 1016
KasI	GGCGCC	1 cut(s)	830
Kpn2I	TCCGGA	2 cut(s)	819, 900
KroI	GCCGGC	1 cut(s)	677
KroNI	GCCGGC	1 cut(s)	679
Ksp22I	TGATCA	1 cut(s)	612
Kzo9I	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
LmnI	GCTCC	8 cut(s)	209, 331, 487, 633, 804, 914, 1066, 1232
Lsp1109I	GCAGC	6 cut(s)	585, 656, 684, 1041, 1192, 1246
LweI	GCATC	3 cut(s)	730, 786, 1176
MaeI	CTAG	1 cut(s)	474
MaeII	ACGT	1 cut(s)	894
MaeIII	GTNAC	1 cut(s)	298
MalI	GATC	7 cut(s)	389, 614, 758, 993, 1040, 1193, 1197
MboI	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
MboII	GAAGA	8 cut(s)	214, 490, 571, 808, 959, 962, 1075, 1223
MfeI	CAATTG	2 cut(s)	568, 1002
MflI	RGATCY	2 cut(s)	387, 991
MhlI	GDGCHC	4 cut(s)	492, 867, 1161, 1237
MluCI	AATT	4 cut(s)	568, 975, 1002, 1214
Mly113I	GGCGCC	1 cut(s)	831
MlyI	GAGTC	2 cut(s)	164, 506
MmeI	TCCRAC	5 cut(s)	51, 756, 952, 1044, 1168
MroI	TCCGGA	2 cut(s)	819, 900
MroNI	GCCGGC	1 cut(s)	677
MseI	TTAA	1 cut(s)	537
MslI	CAYNNNNRTG	1 cut(s)	326
MspA1I	CMGCKG	2 cut(s)	1048, 1223
MspI	CCGG	7 cut(s)	114, 296, 431, 660, 678, 820, 901
MspR9I	CCNGG	2 cut(s)	125, 716
MunI	CAATTG	2 cut(s)	568, 1002
Mva1269I	GAATGC	1 cut(s)	334
MvaI	CCWGG	2 cut(s)	125, 716
MvnI	CGCG	6 cut(s)	309, 703, 705, 737, 873, 1175
MwoI	GCNNNNNNNGC	6 cut(s)	160, 678, 1013, 1051, 1054, 1096
NaeI	GCCGGC	1 cut(s)	679
NarI	GGCGCC	1 cut(s)	831
NcoI	CCATGG	2 cut(s)	462, 507
NdeII	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
NgoMIV	GCCGGC	1 cut(s)	677
NlaIII	CATG	5 cut(s)	112, 247, 331, 466, 511
NlaIV	GGNNCC	5 cut(s)	145, 389, 832, 905, 916
NmeAIII	GCCGAG	3 cut(s)	36, 387, 581
NmuCI	GTSAC	1 cut(s)	298
NspV	TTCGAA	1 cut(s)	945
PaeR7I	CTCGAG	2 cut(s)	392, 1200
PauI	GCGCGC	1 cut(s)	701
PcsI	WCGNNNNNNNCGW	4 cut(s)	590, 741, 750, 1031
PctI	GAATGC	1 cut(s)	334
PdiI	GCCGGC	1 cut(s)	679
PflFI	GACNNNGTC	2 cut(s)	188, 592
PfoI	TCCNGGA	1 cut(s)	123
Ple19I	CGATCG	1 cut(s)	1041
PleI	GAGTC	2 cut(s)	164, 506
PluTI	GGCGCC	1 cut(s)	834
PpsI	GAGTC	2 cut(s)	164, 506
Ppu21I	YACGTR	1 cut(s)	895
PpuMI	RGGWCCY	1 cut(s)	130
Psp124BI	GAGCTC	1 cut(s)	492
Psp5II	RGGWCCY	1 cut(s)	130
Psp6I	CCWGG	2 cut(s)	123, 714
PspGI	CCWGG	2 cut(s)	123, 714
PspN4I	GGNNCC	5 cut(s)	145, 389, 832, 905, 916
PspPI	GGNCC	7 cut(s)	130, 143, 403, 858, 889, 903, 1043
PspPPI	RGGWCCY	1 cut(s)	130
PspXI	VCTCGAGB	2 cut(s)	392, 1200
PstI	CTGCAG	2 cut(s)	674, 1210
PstNI	CAGNNNCTG	1 cut(s)	1075
PsuI	RGATCY	2 cut(s)	387, 991
PsyI	GACNNNGTC	2 cut(s)	188, 592
PteI	GCGCGC	1 cut(s)	701
PvuI	CGATCG	1 cut(s)	1041
PvuII	CAGCTG	1 cut(s)	1223
RsaI	GTAC	1 cut(s)	68
RsaNI	GTAC	1 cut(s)	67
RseI	CAYNNNNRTG	1 cut(s)	326
SacI	GAGCTC	1 cut(s)	492
SaqAI	TTAA	1 cut(s)	537
Sau3AI	GATC	7 cut(s)	387, 612, 756, 991, 1038, 1191, 1195
Sau96I	GGNCC	7 cut(s)	130, 143, 403, 858, 889, 903, 1043
SchI	GAGTC	2 cut(s)	164, 506
ScrFI	CCNGG	2 cut(s)	125, 716
SduI	GDGCHC	4 cut(s)	492, 867, 1161, 1237
SfaNI	GCATC	3 cut(s)	730, 786, 1176
SfcI	CTRYAG	2 cut(s)	670, 1206
SfoI	GGCGCC	1 cut(s)	832
Sfr274I	CTCGAG	2 cut(s)	392, 1200
SfuI	TTCGAA	1 cut(s)	945
SinI	GGWCC	4 cut(s)	130, 858, 889, 903
SlaI	CTCGAG	2 cut(s)	392, 1200
SmiMI	CAYNNNNRTG	1 cut(s)	326
SmlI	CTYRAG	4 cut(s)	41, 158, 392, 1200
SmoI	CTYRAG	4 cut(s)	41, 158, 392, 1200
Sse9I	AATT	4 cut(s)	568, 975, 1002, 1214
SspDI	GGCGCC	1 cut(s)	830
SspMI	CTAG	1 cut(s)	474
SstI	GAGCTC	1 cut(s)	492
StyD4I	CCNGG	2 cut(s)	123, 714
StyI	CCWWGG	4 cut(s)	139, 462, 507, 778
TaaI	ACNGT	1 cut(s)	235
TaiI	ACGT	1 cut(s)	897
TasI	AATT	4 cut(s)	568, 975, 1002, 1214
TauI	GCSGC	5 cut(s)	309, 473, 836, 873, 1048
Tru1I	TTAA	1 cut(s)	537
Tru9I	TTAA	1 cut(s)	537
TscAI	CASTG	2 cut(s)	1194, 1242
TseFI	GTSAC	1 cut(s)	298
TseI	GCWGC	6 cut(s)	573, 669, 672, 1054, 1205, 1259
Tsp45I	GTSAC	1 cut(s)	298
TspDTI	ATGAA	3 cut(s)	214, 232, 316
TspGWI	ACGGA	2 cut(s)	22, 303
TspRI	CASTG	2 cut(s)	1194, 1242
Tth111I	GACNNNGTC	2 cut(s)	188, 592
VpaK11BI	GGWCC	4 cut(s)	130, 858, 889, 903
XagI	CCTNNNNNAGG	3 cut(s)	125, 410, 713
XapI	RAATTY	2 cut(s)	975, 1214
XcmI	CCANNNNNNNNNTGG	2 cut(s)	460, 883
XhoI	CTCGAG	2 cut(s)	392, 1200
XmiI	GTMKAC	1 cut(s)	237
XspI	CTAG	1 cut(s)	474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.