Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0016024

Physical Location & Seq

Genomic Coordinates Forward (+)

8521573 .. 8523710

Gene Structure 2138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGCTTCTTCAATCTCTCTCTCCTTCTCTTCCTCTCTCCTTCCTCATCCTCTTCCTCTCAACAAAAACTCCACCGCCACCGCCACCGCTGCCGCCGCAGCCTCCCAGAAACCCCAATACCCCAACTTTAAGCTGCTCCTCCGCGCATTCGCCACCCCAGCTGTAAGCCGTCGCTCCACTCCATCTCCGTCTTCCGACACCAGAAAGAGGCACTGGAAGAAAGGTGAATACCCAGGCGTCTCGGAGACGTCGGCTCCTGCGAATTACAGAAAAACCCCTGGTCGTTCCACTTCATCTCCGTCTTCCGACACCAGAAAGAAGCACTGGAAGCGAGGTCAGTTCCCGGGCGTCTCGGAGACGTCGACACCGGCGACTTACAGAAAAACCTCCGCTCGTTCCGCCTCATATCCGTCTTCCGACAACAGAAAGAAGCACTGGAAGCAAGGGGAATTCCCGGGGGTCTCGGAGACGTCGATTCCGGCTATTTATAGAAAACCCCCTTTGAAAAATGTGAAGAAGAAGCTGGACCGGAAGAACAATGCCAAGGCCTGGGTCAACACCGTCACGGAGGCCCTGTCAGACGCCATTGACAAGAAGCAGTGGCTCCAAGCTCTTGAGGTGTTTGACATGCTTAGAGAACAACCATTTTATCAACCGAAAGAAGGGACTTACATGAAGCTCATTGGTATGCTTGGAAGGTGCGGCCAACCCAATCGTGCCCACCAGCTTTTCGATACAATGGTTGAAGAGGGCTGTGAACCAACTCTTGAACTTTACACAGCCTTGCTTGCGGCTTATTGCCGGAATAATCTGATTGACGAGGCATTTTCTGTTCTTAACCTGATGAAGACTCTCCCGCAATGCCAGCCTGATGTTTTTACTTACAGTACCTTGATAAAGGTTTGCATTGATCATTTGAAGTTTGATTTAGTTGAGTCCTTGTATGAGGAAATGGCTGAGCGGTTAATAACTCCGAATACAGTCACCCAAAACATAGTGTTGAGTGGATATGGTAAGGCCGGGAAGTATGACCAGATGGAAAAAGTGTTGTCCGGGATGCTGGAGGGTACAAGTTGCAAGCCTGATGTCTGGACAATGAATGTTATCCTTAGCGTGTTTGGAAACAAGGGTCAGATAGATATGATGGAGAGATGGTATGAGAAATTCCGTGATTTTGGGATTGAGCCAGAAACTCGCACTTTGAACATTCTGATTGGTGCTTACGGGAAGAAAAGGCTGTATGATAAGATGTCAACTGTGATGGAGTACATGCGCAAGCTTCAATTCCCATGGACAACCGCAACTTACAACAATGTGATAGAGGCTTTCGCAGATGTAGGAGATGCAAAAAACATGGAATACACATTTGAACAGATGCGTGCTGAGGGCATGAAAGCAGACACCAAAACATTCTGCTGCCTTATTAATGGGTATGCCAATGCAGGCCTCTTCCATAAGGTGGTTAGCTGCGTTCAGTTGGCTGGAAAGTTTGAGATACCTGAGAATACCACATTTTACAATGCGGTGATAGCTGCATGTGCAAAGGCAGAGGATTTGATGGAGATGGAAAGAGTTTTCAATCGGATGAAAGAGAAGCAATGTCAAGCGGATTCCACAACATACTCTGTCATGGTTGAGGCATATAGTAAGGAAGGTATGAACGACAAGATCTACTACTTGAAGCAGGAGATTGGTGCTGATGGTAATCAAAGTGATCAGATTAGTGTCGAAGACAATCAAAGTGATCAGATTAGTGCCGAAGACAATCAGAGTGATCAGATTAGTGCCGAATACAATCAAAGTGATCAGATTAGTGATGAAGGCAATCAAAGTGATCAGAGTAGCTTTGAAGATAATCAAAGTGATCAGAGTAGTTTTGAAGATAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009553 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0019843 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0051704 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

630

Amino Acids

70.92

Weight (kDa)

6.28

Isoelectric Point (pI)

44.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	221 - 340	4.4e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	243 - 303	6.2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	251 - 283	1.1e-07	PPR repeat
PPR_2	PF13041	258 - 302	1.1e-11	PPR repeat family
PPR_2	PF13041	290 - 338	8e-10	PPR repeat family
PPR_3	PF13812	314 - 375	1.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	325 - 373	7.7e-08	PPR repeat family
PPR_2	PF13041	361 - 409	8.3e-07	PPR repeat family
TPR_24	PF23276	418 - 520	1.2e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	433 - 480	7.9e-08	PPR repeat family
PPR_2	PF13041	502 - 550	1.1e-10	PPR repeat family
PPR_3	PF13812	502 - 550	8.5e-06	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016024)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06430
fragaria_vesca	FvH4_4g21400
malus_domestica	MD13G1141500.v1.1 MD16G1137800.v1.1
prunus_persica	Prupe.1G106700_v2.0.a1
pyrus_communis	pycom13g12300 pycom16g12170
rosa_chinensis	RchiOBHm_Chr4g0427331
rosa_multiflora	Rmu_sc0008400.1_g000001
rosa_rugosa	Rorug04G0216700
rosa_samantha	Rh4AG273000 Rh4BG278700 Rh4CG294000 Rh4DG276100
rosa_wichuraiana	Rw4G023690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	251, 362, 473
Acc16I	TGCGCA	1 cut(s)	1274
AccB7I	CCANNNNNTGG	2 cut(s)	549, 1459
AccBSI	CCGCTC	2 cut(s)	392, 961
AccI	GTMKAC	1 cut(s)	362
AccII	CGCG	1 cut(s)	144
AcoI	YGGCCR	1 cut(s)	703
AcsI	RAATTY	2 cut(s)	449, 1163
AcyI	GRCGYC	6 cut(s)	237, 248, 348, 359, 470, 582
AfaI	GTAC	3 cut(s)	889, 1069, 1268
AfiI	CCNNNNNNNGG	4 cut(s)	207, 549, 662, 1459
AjnI	CCWGG	3 cut(s)	232, 277, 548
Alw26I	GTCTC	6 cut(s)	239, 244, 350, 355, 461, 466
Ama87I	CYCGRG	2 cut(s)	343, 454
AoxI	GGCC	5 cut(s)	546, 570, 703, 1017, 1444
ApeKI	GCWGC	6 cut(s)	89, 98, 133, 1416, 1467, 1532
ApoI	RAATTY	2 cut(s)	449, 1163
AseI	ATTAAT	1 cut(s)	1425
AspLEI	GCGC	2 cut(s)	146, 1275
AspS9I	GGNCC	2 cut(s)	526, 571
AsuC2I	CCSGG	6 cut(s)	344, 345, 455, 456, 1021, 1054
AsuHPI	GGTGA	3 cut(s)	236, 976, 1537
AvaI	CYCGRG	2 cut(s)	343, 454
AvaII	GGWCC	1 cut(s)	526
BaeGI	GKGCMC	1 cut(s)	721
BaeI	ACNNNNGTAYC	2 cut(s)	726, 759
BbsI	GAAGAC	6 cut(s)	183, 294, 405, 854, 1737, 1767
BbvCI	CCTCAGC	1 cut(s)	1383
BbvI	GCAGC	6 cut(s)	76, 110, 120, 1403, 1454, 1519
BccI	CCATC	8 cut(s)	190, 1030, 1138, 1146, 1255, 1552, 1558, 1694
BceAI	ACGGC	1 cut(s)	153
BciT130I	CCWGG	3 cut(s)	234, 279, 550
BclI	TGATCA	7 cut(s)	910, 1714, 1744, 1774, 1804, 1834, 1864
BcnI	CCSGG	6 cut(s)	344, 345, 455, 456, 1021, 1054
BcoDI	GTCTC	6 cut(s)	239, 244, 350, 355, 461, 466
BglII	AGATCT	1 cut(s)	1668
BlpI	GCTNAGC	1 cut(s)	957
Bme1390I	CCNGG	9 cut(s)	234, 279, 344, 345, 455, 456, 550, 1021, 1054
Bme18I	GGWCC	1 cut(s)	526
BmeT110I	CYCGRG	2 cut(s)	343, 454
BmgT120I	GGNCC	2 cut(s)	526, 571
BmiI	GGNNCC	2 cut(s)	255, 605
BmrFI	CCNGG	9 cut(s)	234, 279, 344, 345, 455, 456, 550, 1021, 1054
BmsI	GCATC	3 cut(s)	1047, 1333, 1365
BpiI	GAAGAC	6 cut(s)	183, 294, 405, 854, 1737, 1767
BpmI	CTGGAG	1 cut(s)	1082
Bpu10I	CCTNAGC	2 cut(s)	1109, 1383
Bpu1102I	GCTNAGC	1 cut(s)	957
BpuEI	CTTGAG	1 cut(s)	635
BpuMI	CCSGG	6 cut(s)	344, 345, 455, 456, 1021, 1054
BsaBI	GATNNNNATC	1 cut(s)	1704
BsaHI	GRCGYC	6 cut(s)	237, 248, 348, 359, 470, 582
BsaI	GGTCTC	1 cut(s)	466
BsaJI	CCNNGG	8 cut(s)	232, 277, 343, 454, 455, 543, 549, 1289
BsaWI	WCCGGW	1 cut(s)	528
Bsc4I	CCNNNNNNNGG	4 cut(s)	207, 549, 662, 1459
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	3 cut(s)	218, 329, 440
Bse3DI	GCAATG	2 cut(s)	866, 1604
Bse8I	GATNNNNATC	1 cut(s)	1704
BseBI	CCWGG	3 cut(s)	234, 279, 550
BseDI	CCNNGG	8 cut(s)	232, 277, 343, 454, 455, 543, 549, 1289
BseGI	GGATG	3 cut(s)	46, 1062, 1590
BseJI	GATNNNNATC	1 cut(s)	1704
BseLI	CCNNNNNNNGG	4 cut(s)	207, 549, 662, 1459
BseMI	GCAATG	2 cut(s)	866, 1604
BseMII	CTCAG	3 cut(s)	948, 1374, 1491
BseNI	ACTGG	3 cut(s)	218, 329, 440
BseRI	GAGGAG	1 cut(s)	128
BseSI	GKGCMC	1 cut(s)	721
BseXI	GCAGC	6 cut(s)	76, 110, 120, 1403, 1454, 1519
BseYI	CCCAGC	1 cut(s)	157
Bsh1236I	CGCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	548, 572, 705, 1019, 1446
BsiHKCI	CYCGRG	2 cut(s)	343, 454
BsiSI	CCGG	8 cut(s)	344, 368, 455, 479, 529, 802, 1020, 1053
BslFI	GGGAC	1 cut(s)	679
BslI	CCNNNNNNNGG	4 cut(s)	207, 549, 662, 1459
BsmAI	GTCTC	6 cut(s)	239, 244, 350, 355, 461, 466
BsmBI	CGTCTC	5 cut(s)	239, 244, 350, 355, 461
BsmFI	GGGAC	1 cut(s)	679
BsmI	GAATGC	1 cut(s)	146
BsnI	GGCC	5 cut(s)	548, 572, 705, 1019, 1446
Bso31I	GGTCTC	1 cut(s)	466
BsoBI	CYCGRG	2 cut(s)	343, 454
Bsp1286I	GDGCHC	1 cut(s)	721
Bsp143I	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
Bsp1720I	GCTNAGC	1 cut(s)	957
Bsp19I	CCATGG	1 cut(s)	1289
BspANI	GGCC	5 cut(s)	548, 572, 705, 1019, 1446
BspCNI	CTCAG	3 cut(s)	949, 1375, 1492
BspFNI	CGCG	1 cut(s)	144
BspLI	GGNNCC	2 cut(s)	255, 605
BspTNI	GGTCTC	1 cut(s)	466
BsrBI	CCGCTC	2 cut(s)	392, 961
BsrDI	GCAATG	2 cut(s)	866, 1604
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	3 cut(s)	218, 329, 440
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	8 cut(s)	232, 277, 343, 454, 455, 543, 549, 1289
BssMI	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
BssNI	GRCGYC	6 cut(s)	237, 248, 348, 359, 470, 582
BssT1I	CCWWGG	2 cut(s)	543, 1289
Bst2UI	CCWGG	3 cut(s)	234, 279, 550
Bst4CI	ACNGT	4 cut(s)	562, 887, 982, 1258
Bst6I	CTCTTC	4 cut(s)	34, 57, 741, 1454
BstACI	GRCGYC	6 cut(s)	237, 248, 348, 359, 470, 582
BstC8I	GCNNGC	6 cut(s)	789, 866, 1079, 1277, 1380, 1444
BstDEI	CTNAG	5 cut(s)	632, 957, 1109, 1383, 1500
BstDSI	CCRYGG	1 cut(s)	1289
BstF5I	GGATG	3 cut(s)	46, 1062, 1590
BstFNI	CGCG	1 cut(s)	144
BstHHI	GCGC	2 cut(s)	146, 1275
BstKTI	GATC	8 cut(s)	913, 1671, 1717, 1747, 1777, 1807, 1837, 1867
BstMAI	GTCTC	6 cut(s)	239, 244, 350, 355, 461, 466
BstMBI	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
BstNI	CCWGG	3 cut(s)	234, 279, 550
BstNSI	RCATGY	3 cut(s)	631, 1273, 1539
BstSCI	CCNGG	9 cut(s)	232, 277, 342, 343, 453, 454, 548, 1019, 1052
BstSLI	GKGCMC	1 cut(s)	721
BstUI	CGCG	1 cut(s)	144
BstV1I	GCAGC	6 cut(s)	76, 110, 120, 1403, 1454, 1519
BstV2I	GAAGAC	6 cut(s)	183, 294, 405, 854, 1737, 1767
BstX2I	RGATCY	1 cut(s)	1668
BstYI	RGATCY	1 cut(s)	1668
BsuRI	GGCC	5 cut(s)	548, 572, 705, 1019, 1446
BtgI	CCRYGG	1 cut(s)	1289
BtsCI	GGATG	3 cut(s)	46, 1062, 1590
BtsI	GCAGTG	1 cut(s)	605
BtsIMutI	CAGTG	4 cut(s)	211, 322, 433, 605
Cac8I	GCNNGC	6 cut(s)	789, 866, 1079, 1277, 1380, 1444
CfoI	GCGC	2 cut(s)	146, 1275
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	2 cut(s)	526, 571
Cfr9I	CCCGGG	2 cut(s)	343, 454
CseI	GACGC	3 cut(s)	226, 337, 590
Csp6I	GTAC	3 cut(s)	888, 1068, 1267
CviAII	CATG	8 cut(s)	628, 673, 1270, 1290, 1354, 1390, 1536, 1630
CviQI	GTAC	3 cut(s)	888, 1068, 1267
DdeI	CTNAG	5 cut(s)	632, 957, 1109, 1383, 1500
DpnI	GATC	8 cut(s)	912, 1670, 1716, 1746, 1776, 1806, 1836, 1866
DpnII	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
EaeI	YGGCCR	1 cut(s)	703
Eam1104I	CTCTTC	4 cut(s)	34, 57, 741, 1454
EarI	CTCTTC	4 cut(s)	34, 57, 741, 1454
EciI	GGCGGA	1 cut(s)	388
Eco130I	CCWWGG	2 cut(s)	543, 1289
Eco147I	AGGCCT	2 cut(s)	548, 1446
Eco31I	GGTCTC	1 cut(s)	466
Eco47I	GGWCC	1 cut(s)	526
Eco88I	CYCGRG	2 cut(s)	343, 454
EcoO109I	RGGNCCY	1 cut(s)	571
EcoRI	GAATTC	1 cut(s)	449
EcoRII	CCWGG	3 cut(s)	232, 277, 548
EcoT14I	CCWWGG	2 cut(s)	543, 1289
ErhI	CCWWGG	2 cut(s)	543, 1289
Esp3I	CGTCTC	5 cut(s)	239, 244, 350, 355, 461
FaeI	CATG	8 cut(s)	631, 676, 1273, 1293, 1357, 1393, 1539, 1633
FaqI	GGGAC	1 cut(s)	679
FatI	CATG	8 cut(s)	627, 672, 1269, 1289, 1353, 1389, 1535, 1629
FauI	CCCGC	1 cut(s)	864
FbaI	TGATCA	7 cut(s)	910, 1714, 1744, 1774, 1804, 1834, 1864
FblI	GTMKAC	1 cut(s)	362
FokI	GGATG	3 cut(s)	33, 1069, 1597
FspI	TGCGCA	1 cut(s)	1274
GlaI	GCGC	2 cut(s)	145, 1274
GsaI	CCCAGC	1 cut(s)	161
GsuI	CTGGAG	1 cut(s)	1082
HaeIII	GGCC	5 cut(s)	548, 572, 705, 1019, 1446
HapII	CCGG	8 cut(s)	344, 368, 455, 479, 529, 802, 1020, 1053
HgaI	GACGC	3 cut(s)	226, 337, 590
HhaI	GCGC	2 cut(s)	146, 1275
Hin1I	GRCGYC	6 cut(s)	237, 248, 348, 359, 470, 582
Hin1II	CATG	8 cut(s)	631, 676, 1273, 1293, 1357, 1393, 1539, 1633
Hin6I	GCGC	2 cut(s)	144, 1273
HinP1I	GCGC	2 cut(s)	144, 1273
HincII	GTYRAC	3 cut(s)	363, 556, 1254
HindII	GTYRAC	3 cut(s)	363, 556, 1254
HindIII	AAGCTT	1 cut(s)	1277
HinfI	GANTC	4 cut(s)	475, 850, 935, 1610
HpaII	CCGG	8 cut(s)	344, 368, 455, 479, 529, 802, 1020, 1053
HphI	GGTGA	3 cut(s)	236, 976, 1537
Hpy166II	GTNNAC	4 cut(s)	363, 556, 758, 1254
Hpy188III	TCNNGA	3 cut(s)	614, 767, 1090
Hpy8I	GTNNAC	4 cut(s)	363, 556, 758, 1254
Hpy99I	CGWCG	4 cut(s)	174, 253, 364, 475
HpyAV	CCTTC	6 cut(s)	34, 50, 656, 690, 1646, 1814
HpyCH4III	ACNGT	4 cut(s)	562, 887, 982, 1258
HpyCH4IV	ACGT	3 cut(s)	248, 359, 470
HpyCH4V	TGCA	6 cut(s)	906, 1077, 1346, 1442, 1535, 1541
HpyF3I	CTNAG	5 cut(s)	632, 957, 1109, 1383, 1500
HpySE526I	ACGT	3 cut(s)	248, 359, 470
Hsp92I	GRCGYC	6 cut(s)	237, 248, 348, 359, 470, 582
Hsp92II	CATG	8 cut(s)	631, 676, 1273, 1293, 1357, 1393, 1539, 1633
HspAI	GCGC	2 cut(s)	144, 1273
Ksp22I	TGATCA	7 cut(s)	910, 1714, 1744, 1774, 1804, 1834, 1864
Kzo9I	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
LmnI	GCTCC	4 cut(s)	141, 179, 259, 609
Lsp1109I	GCAGC	6 cut(s)	76, 110, 120, 1403, 1454, 1519
LweI	GCATC	3 cut(s)	1047, 1333, 1365
MaeII	ACGT	3 cut(s)	248, 359, 470
MaeIII	GTNAC	2 cut(s)	562, 982
MalI	GATC	8 cut(s)	912, 1670, 1716, 1746, 1776, 1806, 1836, 1866
MbiI	CCGCTC	2 cut(s)	392, 961
MboI	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
MflI	RGATCY	1 cut(s)	1668
MhlI	GDGCHC	1 cut(s)	721
MluCI	AATT	5 cut(s)	262, 449, 1163, 1283, 1885
MlyI	GAGTC	2 cut(s)	844, 944
MmeI	TCCRAC	3 cut(s)	219, 330, 441
MseI	TTAA	4 cut(s)	129, 837, 965, 1425
MslI	CAYNNNNRTG	1 cut(s)	686
MspA1I	CMGCKG	2 cut(s)	89, 161
MspI	CCGG	8 cut(s)	344, 368, 455, 479, 529, 802, 1020, 1053
MspR9I	CCNGG	9 cut(s)	234, 279, 344, 345, 455, 456, 550, 1021, 1054
Mva1269I	GAATGC	1 cut(s)	146
MvaI	CCWGG	3 cut(s)	234, 279, 550
MvnI	CGCG	1 cut(s)	144
NciI	CCSGG	6 cut(s)	344, 345, 455, 456, 1021, 1054
NcoI	CCATGG	1 cut(s)	1289
NdeII	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
NlaIII	CATG	8 cut(s)	631, 676, 1273, 1293, 1357, 1393, 1539, 1633
NlaIV	GGNNCC	2 cut(s)	255, 605
NmuCI	GTSAC	2 cut(s)	562, 982
NsbI	TGCGCA	1 cut(s)	1274
NspI	RCATGY	3 cut(s)	631, 1273, 1539
PceI	AGGCCT	2 cut(s)	548, 1446
PcsI	WCGNNNNNNNCGW	4 cut(s)	257, 359, 368, 470
PctI	GAATGC	1 cut(s)	146
PfeI	GAWTC	2 cut(s)	475, 1610
PflMI	CCANNNNNTGG	2 cut(s)	549, 1459
PfoI	TCCNGGA	1 cut(s)	1052
PleI	GAGTC	2 cut(s)	844, 943
PpsI	GAGTC	2 cut(s)	844, 943
PshBI	ATTAAT	1 cut(s)	1425
Psp6I	CCWGG	3 cut(s)	232, 277, 548
PspFI	CCCAGC	1 cut(s)	157
PspGI	CCWGG	3 cut(s)	232, 277, 548
PspN4I	GGNNCC	2 cut(s)	255, 605
PspPI	GGNCC	2 cut(s)	526, 571
PsuI	RGATCY	1 cut(s)	1668
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	3 cut(s)	889, 1069, 1268
RsaNI	GTAC	3 cut(s)	888, 1068, 1267
RseI	CAYNNNNRTG	1 cut(s)	686
SalI	GTCGAC	1 cut(s)	361
SaqAI	TTAA	4 cut(s)	129, 837, 965, 1425
Sau3AI	GATC	8 cut(s)	910, 1668, 1714, 1744, 1774, 1804, 1834, 1864
Sau96I	GGNCC	2 cut(s)	526, 571
SchI	GAGTC	2 cut(s)	844, 944
ScrFI	CCNGG	9 cut(s)	234, 279, 344, 345, 455, 456, 550, 1021, 1054
SduI	GDGCHC	1 cut(s)	721
SfaNI	GCATC	3 cut(s)	1047, 1333, 1365
SgrAI	CRCCGGYG	1 cut(s)	367
SinI	GGWCC	1 cut(s)	526
SmaI	CCCGGG	2 cut(s)	345, 456
SmiMI	CAYNNNNRTG	1 cut(s)	686
SmlI	CTYRAG	1 cut(s)	614
SmoI	CTYRAG	1 cut(s)	614
Sse9I	AATT	5 cut(s)	262, 449, 1163, 1283, 1885
SseBI	AGGCCT	2 cut(s)	548, 1446
StuI	AGGCCT	2 cut(s)	548, 1446
StyD4I	CCNGG	9 cut(s)	232, 277, 342, 343, 453, 454, 548, 1019, 1052
StyI	CCWWGG	2 cut(s)	543, 1289
TaaI	ACNGT	4 cut(s)	562, 887, 982, 1258
TaiI	ACGT	3 cut(s)	251, 362, 473
TaqI	TCGA	4 cut(s)	362, 473, 732, 1728
TasI	AATT	5 cut(s)	262, 449, 1163, 1283, 1885
TatI	WGTACW	1 cut(s)	1266
TauI	GCSGC	4 cut(s)	95, 98, 705, 794
TfiI	GAWTC	2 cut(s)	475, 1610
Tru1I	TTAA	4 cut(s)	129, 837, 965, 1425
Tru9I	TTAA	4 cut(s)	129, 837, 965, 1425
TscAI	CASTG	4 cut(s)	218, 329, 440, 605
TseFI	GTSAC	2 cut(s)	562, 982
TseI	GCWGC	6 cut(s)	89, 98, 133, 1416, 1467, 1532
Tsp45I	GTSAC	2 cut(s)	562, 982
TspDTI	ATGAA	8 cut(s)	282, 689, 860, 1112, 1406, 1601, 1673, 1833
TspGWI	ACGGA	5 cut(s)	177, 288, 399, 581, 1157
TspMI	CCCGGG	2 cut(s)	343, 454
TspRI	CASTG	4 cut(s)	218, 329, 440, 605
Van91I	CCANNNNNTGG	2 cut(s)	549, 1459
VpaK11BI	GGWCC	1 cut(s)	526
VspI	ATTAAT	1 cut(s)	1425
XapI	RAATTY	2 cut(s)	449, 1163
XceI	RCATGY	3 cut(s)	631, 1273, 1539
XmaI	CCCGGG	2 cut(s)	343, 454
XmiI	GTMKAC	1 cut(s)	362
ZraI	GACGTC	3 cut(s)	249, 360, 471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.