Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0016024

Physical Location & Seq

Genomic Coordinates Reverse (-)

58905956 .. 58908382

Gene Structure 2427 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG273000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCTTCTTCTTCACTCTCACTCTCCTTCTCTACTTCTCTCCACTCTCATCCCCTCTCCCCCAACAAGAGCCCCACCGCTCACAGAGCCCAAGACCCCAACTTTAAACCGGCCCACTGCGCCTACGCAGCTCCAGCCAAAAGCACCAGGTCACCTTCTTCGTCTTCTCAGACCAGAAAGCGGCACTGGAAGCAAGGTGAATACCCAGGTGTTTCAGAGACTCCCATCCCCAGAAGAACGCCTCTCAAGAATGTCAAGAAGAAGCTTGACCGCAAGGACAAGGCCAAGGCTTGGGTCAACACCGTCACTGAAGAATTCTGTCACTCCATCGACAACAAGCAATGGCTCCGAGCCCTTGAGGTGTTTGAAATGCTTAAAGAGCAACCGTTTTATCAACCGAAAGAAGGGACTTACATGAGGCTCCTTCTTCTGCTCGGACGGTCTGGCCAACCTCACCGTGCTCAGAGTCTTTTCGACGAAATGGTTGAAGAAGGGTGTCAACCAACTGCTGAACTGTACACAGCCCTGCTTACAGCTTACTGCAGGAGCAATCTTATTCATGACGCGTTTTCTGTTCTTAACCAGATGAAGACGTTCCCTCAGTGCCAGCCGGATGTTTTTACATACAGTACCTTGATAAAGGCTTGCATTGATAATTTGCAGTTTGAATTAGTTGAGTCTTTGTATGAAGAAATGGCTGCACGATCAATCACTCCAAACACAGTCACCCAAAACGTAGTCCTGAGTGGATATGGTAAGGCCGGGATGTATGACCAGATGGAAAGAGTGTTGTCAGGAATGCTGGAGGGTGAAAGTTGCAAGCCCGATGTTTGGACAATGAATGTCATCCTTACTATTTTTGGTAACAAGGGTCAGATAGAGATGATGGAGAGATGGTATCAGAAATTCCGTGATTTTGGGATTGAGCCAGAAACTCGTACTTTTAATATTCTGATTAATGCTTATGGGAAGAAGAAATTGTATGATAAAATGTCAACTGTGATGGAATACATGCGCAAGCTTCACTTCCCGTGGACCACCGCAACTTACAATAATGTTATTGAGGCTTTTGCGGATGTGGGAGATGCAAAAAACATGGAGTACACATTTGATCAGATGCGTGCTGAGGACATGAAAGCAGACACCAAAACATTCTGCTGCCTAATCAGAGGGTATGCCAATGCAGGTCTTTTCCATAAGGTGATTAGCAGTGTTCAGTTGGCTGGAAAGTTTGAGATACCTGAAAATACCACGTTTTATAATGCAGTGATATCTGCATGTGCAAAGGCAGATGATTTGATGGAGATGGAGAGAGTTTTTAACCGGATGAAAGAAAAGCAAGTCTCGCCAGATTCCTCGACATATGCCGTCATGGTTGAGGCATATAGAAAGGAAGGTATGAACGACAAGATCTACTATTTGGAGCAGGAGATTAGTGCTGATGGTATTCAAACCTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009553 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0019843 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0051704 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

486

Amino Acids

55.61

Weight (kDa)

7.53

Isoelectric Point (pI)

48.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	156 - 219	7.5e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	165 - 197	1.2e-07	PPR repeat
PPR_2	PF13041	170 - 216	1.6e-12	PPR repeat family
PPR_2	PF13041	204 - 252	2e-10	PPR repeat family
PPR_3	PF13812	227 - 289	3.8e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	239 - 284	9.7e-07	PPR repeat family
PPR_2	PF13041	275 - 323	2.4e-08	PPR repeat family
PPR_2	PF13041	347 - 394	6.4e-07	PPR repeat family
PPR_long	PF17177	408 - 484	5.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	416 - 462	9e-11	PPR repeat family
PPR_3	PF13812	416 - 462	5.5e-07	Pentatricopeptide repeat domain
PPR	PF01535	420 - 447	5.2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016024)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06430
fragaria_vesca	FvH4_4g21400
malus_domestica	MD13G1141500.v1.1 MD16G1137800.v1.1
prunus_persica	Prupe.1G106700_v2.0.a1
pyrus_communis	pycom13g12300 pycom16g12170
rosa_chinensis	RchiOBHm_Chr4g0427331
rosa_multiflora	Rmu_sc0008400.1_g000001
rosa_rugosa	Rorug04G0216700
rosa_samantha	Rh4AG273000 Rh4BG278700 Rh4CG294000 Rh4DG276100
rosa_wichuraiana	Rw4G023690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1260
Acc16I	TGCGCA	1 cut(s)	1016
Acc36I	ACCTGC	1 cut(s)	1175
AccB7I	CCANNNNNTGG	1 cut(s)	291
AccBSI	CCGCTC	1 cut(s)	80
AccII	CGCG	1 cut(s)	566
AciI	CCGC	5 cut(s)	78, 181, 271, 1041, 1073
AcoI	YGGCCR	1 cut(s)	445
AcsI	RAATTY	2 cut(s)	314, 905
AcuI	CTGAAG	1 cut(s)	330
AfaI	GTAC	4 cut(s)	518, 631, 940, 1103
AfiI	CCNNNNNNNGG	4 cut(s)	180, 291, 404, 831
AflIII	ACRYGT	1 cut(s)	564
AgsI	TTSAA	4 cut(s)	368, 488, 668, 1451
AjnI	CCWGG	2 cut(s)	146, 205
AluBI	AGCT	4 cut(s)	131, 265, 536, 1021
AluI	AGCT	4 cut(s)	131, 265, 536, 1021
Alw21I	GWGCWC	1 cut(s)	463
Alw26I	GTCTC	2 cut(s)	212, 1348
AoxI	GGCC	4 cut(s)	111, 282, 445, 759
ApeKI	GCWGC	3 cut(s)	128, 698, 1158
ApoI	RAATTY	2 cut(s)	314, 905
AseI	ATTAAT	1 cut(s)	957
Asp700I	GAANNNNTTC	1 cut(s)	593
AspLEI	GCGC	2 cut(s)	122, 1017
AspS9I	GGNCC	2 cut(s)	112, 1035
AsuC2I	CCSGG	1 cut(s)	763
AsuHPI	GGTGA	6 cut(s)	144, 209, 446, 718, 821, 1213
AvaII	GGWCC	1 cut(s)	1035
BalI	TGGCCA	1 cut(s)	447
BanII	GRGCYC	3 cut(s)	74, 91, 355
BbsI	GAAGAC	2 cut(s)	156, 596
Bbv12I	GWGCWC	1 cut(s)	463
BbvCI	CCTCAGC	1 cut(s)	1125
BbvI	GCAGC	3 cut(s)	140, 685, 1145
BccI	CCATC	9 cut(s)	233, 335, 772, 880, 888, 997, 1294, 1300, 1436
BceAI	ACGGC	1 cut(s)	1352
BciT130I	CCWGG	2 cut(s)	148, 207
BclI	TGATCA	1 cut(s)	1111
BcnI	CCSGG	1 cut(s)	763
BcoDI	GTCTC	2 cut(s)	212, 1348
BfmI	CTRYAG	1 cut(s)	541
BfuAI	ACCTGC	1 cut(s)	1175
BglII	AGATCT	1 cut(s)	1410
BisI	GCNGC	4 cut(s)	129, 182, 699, 1159
BlsI	GCNGC	4 cut(s)	130, 183, 700, 1160
Bme1390I	CCNGG	3 cut(s)	148, 207, 763
Bme18I	GGWCC	1 cut(s)	1035
BmgT120I	GGNCC	2 cut(s)	112, 1035
BmiI	GGNNCC	2 cut(s)	347, 422
BmrFI	CCNGG	3 cut(s)	148, 207, 763
BmsI	GCATC	2 cut(s)	1075, 1107
BpiI	GAAGAC	2 cut(s)	156, 596
BpmI	CTGGAG	2 cut(s)	117, 824
Bpu10I	CCTNAGC	1 cut(s)	1125
BpuEI	CTTGAG	2 cut(s)	230, 377
BpuMI	CCSGG	1 cut(s)	763
BsaJI	CCNNGG	3 cut(s)	205, 285, 1031
BsaWI	WCCGGW	1 cut(s)	1323
BsaXI	ACNNNNNCTCC	2 cut(s)	881, 911
Bsc4I	CCNNNNNNNGG	4 cut(s)	180, 291, 404, 831
Bse118I	RCCGGY	1 cut(s)	109
Bse1I	ACTGG	1 cut(s)	191
Bse3DI	GCAATG	1 cut(s)	347
BseBI	CCWGG	2 cut(s)	148, 207
BseDI	CCNNGG	3 cut(s)	205, 285, 1031
BseGI	GGATG	7 cut(s)	49, 225, 619, 771, 846, 1081, 1332
BseLI	CCNNNNNNNGG	4 cut(s)	180, 291, 404, 831
BseMI	GCAATG	1 cut(s)	347
BseMII	CTCAG	5 cut(s)	182, 476, 614, 734, 1116
BseNI	ACTGG	1 cut(s)	191
BseXI	GCAGC	3 cut(s)	140, 685, 1145
BsgI	GTGCAG	1 cut(s)	684
Bsh1236I	CGCG	1 cut(s)	566
BshFI	GGCC	4 cut(s)	113, 284, 447, 761
BsiHKAI	GWGCWC	1 cut(s)	463
BsiSI	CCGG	4 cut(s)	110, 611, 762, 1324
BslFI	GGGAC	1 cut(s)	421
BslI	CCNNNNNNNGG	4 cut(s)	180, 291, 404, 831
BsmAI	GTCTC	2 cut(s)	212, 1348
BsmFI	GGGAC	1 cut(s)	421
BsmI	GAATGC	1 cut(s)	804
BsnI	GGCC	4 cut(s)	113, 284, 447, 761
Bsp1286I	GDGCHC	4 cut(s)	74, 91, 355, 463
Bsp1407I	TGTACA	1 cut(s)	516
Bsp143I	GATC	3 cut(s)	704, 1111, 1410
BspACI	CCGC	5 cut(s)	78, 181, 271, 1041, 1073
BspANI	GGCC	4 cut(s)	113, 284, 447, 761
BspCNI	CTCAG	5 cut(s)	181, 475, 613, 735, 1117
BspFNI	CGCG	1 cut(s)	566
BspHI	TCATGA	1 cut(s)	559
BspLI	GGNNCC	2 cut(s)	347, 422
BspMAI	CTGCAG	1 cut(s)	545
BspMI	ACCTGC	1 cut(s)	1175
BsrBI	CCGCTC	1 cut(s)	80
BsrDI	GCAATG	1 cut(s)	347
BsrFI	RCCGGY	1 cut(s)	109
BsrGI	TGTACA	1 cut(s)	516
BsrI	ACTGG	1 cut(s)	191
BssAI	RCCGGY	1 cut(s)	109
BssECI	CCNNGG	3 cut(s)	205, 285, 1031
BssMI	GATC	3 cut(s)	704, 1111, 1410
BssT1I	CCWWGG	1 cut(s)	285
Bst2UI	CCWGG	2 cut(s)	148, 207
Bst4CI	ACNGT	8 cut(s)	304, 387, 441, 458, 516, 629, 724, 1000
BstAUI	TGTACA	1 cut(s)	516
BstC8I	GCNNGC	5 cut(s)	608, 646, 821, 1019, 1122
BstDEI	CTNAG	5 cut(s)	168, 462, 600, 743, 1125
BstDSI	CCRYGG	1 cut(s)	1031
BstEII	GGTNACC	1 cut(s)	150
BstF5I	GGATG	7 cut(s)	49, 225, 619, 771, 846, 1081, 1332
BstFNI	CGCG	1 cut(s)	566
BstHHI	GCGC	2 cut(s)	122, 1017
BstKTI	GATC	3 cut(s)	707, 1114, 1413
BstMAI	GTCTC	2 cut(s)	212, 1348
BstMBI	GATC	3 cut(s)	704, 1111, 1410
BstMWI	GCNNNNNNNGC	7 cut(s)	86, 119, 128, 134, 190, 379, 1345
BstNI	CCWGG	2 cut(s)	148, 207
BstNSI	RCATGY	2 cut(s)	1015, 1281
BstPI	GGTNACC	1 cut(s)	150
BstSCI	CCNGG	3 cut(s)	146, 205, 761
BstSFI	CTRYAG	1 cut(s)	541
BstUI	CGCG	1 cut(s)	566
BstV1I	GCAGC	3 cut(s)	140, 685, 1145
BstV2I	GAAGAC	2 cut(s)	156, 596
BstX2I	RGATCY	1 cut(s)	1410
BstYI	RGATCY	1 cut(s)	1410
BsuRI	GGCC	4 cut(s)	113, 284, 447, 761
BtgI	CCRYGG	1 cut(s)	1031
BtsCI	GGATG	7 cut(s)	49, 225, 619, 771, 846, 1081, 1332
BtsI	GCAGTG	3 cut(s)	115, 1216, 1272
BtsIMutI	CAGTG	6 cut(s)	115, 184, 306, 608, 1216, 1272
BveI	ACCTGC	1 cut(s)	1175
Cac8I	GCNNGC	5 cut(s)	608, 646, 821, 1019, 1122
CciI	TCATGA	1 cut(s)	559
CfoI	GCGC	2 cut(s)	122, 1017
Cfr10I	RCCGGY	1 cut(s)	109
Cfr13I	GGNCC	2 cut(s)	112, 1035
CseI	GACGC	1 cut(s)	572
CsiI	ACCWGGT	1 cut(s)	146
Csp6I	GTAC	4 cut(s)	517, 630, 939, 1102
CviAII	CATG	7 cut(s)	415, 560, 1012, 1096, 1132, 1278, 1372
CviQI	GTAC	4 cut(s)	517, 630, 939, 1102
DdeI	CTNAG	5 cut(s)	168, 462, 600, 743, 1125
DpnI	GATC	3 cut(s)	706, 1113, 1412
DpnII	GATC	3 cut(s)	704, 1111, 1410
DraI	TTTAAA	1 cut(s)	106
EaeI	YGGCCR	1 cut(s)	445
Eco130I	CCWWGG	1 cut(s)	285
Eco24I	GRGCYC	3 cut(s)	74, 91, 355
Eco32I	GATATC	1 cut(s)	1272
Eco47I	GGWCC	1 cut(s)	1035
Eco57I	CTGAAG	1 cut(s)	330
Eco91I	GGTNACC	1 cut(s)	150
EcoO65I	GGTNACC	1 cut(s)	150
EcoRI	GAATTC	1 cut(s)	314
EcoRII	CCWGG	2 cut(s)	146, 205
EcoRV	GATATC	1 cut(s)	1272
EcoT14I	CCWWGG	1 cut(s)	285
EcoT38I	GRGCYC	3 cut(s)	74, 91, 355
ErhI	CCWWGG	1 cut(s)	285
FaeI	CATG	7 cut(s)	418, 563, 1015, 1099, 1135, 1281, 1375
FalI	AAGNNNNNCTT	2 cut(s)	1010, 1042
FaqI	GGGAC	1 cut(s)	421
FatI	CATG	7 cut(s)	414, 559, 1011, 1095, 1131, 1277, 1371
FauNDI	CATATG	1 cut(s)	1363
FbaI	TGATCA	1 cut(s)	1111
Fnu4HI	GCNGC	4 cut(s)	129, 182, 699, 1159
FokI	GGATG	7 cut(s)	36, 212, 626, 778, 833, 1088, 1339
FriOI	GRGCYC	3 cut(s)	74, 91, 355
Fsp4HI	GCNGC	4 cut(s)	129, 182, 699, 1159
FspI	TGCGCA	1 cut(s)	1016
GlaI	GCGC	2 cut(s)	121, 1016
GluI	GCNGC	4 cut(s)	129, 182, 699, 1159
GsuI	CTGGAG	2 cut(s)	117, 824
HaeIII	GGCC	4 cut(s)	113, 284, 447, 761
HapII	CCGG	4 cut(s)	110, 611, 762, 1324
HgaI	GACGC	1 cut(s)	572
HhaI	GCGC	2 cut(s)	122, 1017
Hin1II	CATG	7 cut(s)	418, 563, 1015, 1099, 1135, 1281, 1375
Hin6I	GCGC	2 cut(s)	120, 1015
HinP1I	GCGC	2 cut(s)	120, 1015
HincII	GTYRAC	3 cut(s)	298, 500, 996
HindII	GTYRAC	3 cut(s)	298, 500, 996
HindIII	AAGCTT	2 cut(s)	263, 1019
HinfI	GANTC	4 cut(s)	220, 466, 677, 1352
HpaII	CCGG	4 cut(s)	110, 611, 762, 1324
HphI	GGTGA	6 cut(s)	144, 209, 446, 718, 821, 1213
Hpy166II	GTNNAC	6 cut(s)	298, 500, 519, 996, 1035, 1104
Hpy188III	TCNNGA	5 cut(s)	247, 256, 560, 742, 795
Hpy8I	GTNNAC	6 cut(s)	298, 500, 519, 996, 1035, 1104
Hpy99I	CGWCG	1 cut(s)	479
HpyAV	CCTTC	6 cut(s)	37, 165, 398, 434, 485, 1388
HpyCH4III	ACNGT	8 cut(s)	304, 387, 441, 458, 516, 629, 724, 1000
HpyCH4IV	ACGT	3 cut(s)	593, 735, 1253
HpyF10VI	GCNNNNNNNGC	7 cut(s)	86, 119, 128, 134, 190, 379, 1345
HpyF3I	CTNAG	5 cut(s)	168, 462, 600, 743, 1125
HpySE526I	ACGT	3 cut(s)	593, 735, 1253
Hsp92II	CATG	7 cut(s)	418, 563, 1015, 1099, 1135, 1281, 1375
HspAI	GCGC	2 cut(s)	120, 1015
Ksp22I	TGATCA	1 cut(s)	1111
Kzo9I	GATC	3 cut(s)	704, 1111, 1410
LmnI	GCTCC	5 cut(s)	136, 351, 426, 546, 1423
Lsp1109I	GCAGC	3 cut(s)	140, 685, 1145
LweI	GCATC	2 cut(s)	1075, 1107
MabI	ACCWGGT	1 cut(s)	146
MaeII	ACGT	3 cut(s)	593, 735, 1253
MaeIII	GTNAC	5 cut(s)	150, 304, 320, 724, 863
MalI	GATC	3 cut(s)	706, 1113, 1412
MbiI	CCGCTC	1 cut(s)	80
MboI	GATC	3 cut(s)	704, 1111, 1410
MflI	RGATCY	1 cut(s)	1410
MhlI	GDGCHC	4 cut(s)	74, 91, 355, 463
MlsI	TGGCCA	1 cut(s)	447
MluCI	AATT	5 cut(s)	314, 655, 668, 905, 977
MluI	ACGCGT	1 cut(s)	564
MluNI	TGGCCA	1 cut(s)	447
MlyI	GAGTC	3 cut(s)	214, 475, 686
Mox20I	TGGCCA	1 cut(s)	447
MroXI	GAANNNNTTC	1 cut(s)	593
MscI	TGGCCA	1 cut(s)	447
MseI	TTAA	6 cut(s)	105, 375, 579, 945, 957, 1320
Msp20I	TGGCCA	1 cut(s)	447
MspI	CCGG	4 cut(s)	110, 611, 762, 1324
MspR9I	CCNGG	3 cut(s)	148, 207, 763
Mva1269I	GAATGC	1 cut(s)	804
MvaI	CCWGG	2 cut(s)	148, 207
MvnI	CGCG	1 cut(s)	566
MwoI	GCNNNNNNNGC	7 cut(s)	86, 119, 128, 134, 190, 379, 1345
NciI	CCSGG	1 cut(s)	763
NdeI	CATATG	1 cut(s)	1363
NdeII	GATC	3 cut(s)	704, 1111, 1410
NlaIII	CATG	7 cut(s)	418, 563, 1015, 1099, 1135, 1281, 1375
NlaIV	GGNNCC	2 cut(s)	347, 422
NmuCI	GTSAC	4 cut(s)	150, 304, 320, 724
NsbI	TGCGCA	1 cut(s)	1016
NspI	RCATGY	2 cut(s)	1015, 1281
PagI	TCATGA	1 cut(s)	559
PctI	GAATGC	1 cut(s)	804
PdmI	GAANNNNTTC	1 cut(s)	593
PfeI	GAWTC	1 cut(s)	1352
PflMI	CCANNNNNTGG	1 cut(s)	291
PkrI	GCNGC	4 cut(s)	130, 183, 700, 1160
PleI	GAGTC	3 cut(s)	214, 474, 685
PpsI	GAGTC	3 cut(s)	214, 474, 685
PshBI	ATTAAT	1 cut(s)	957
PsiI	TTATAA	1 cut(s)	1260
Psp6I	CCWGG	2 cut(s)	146, 205
PspEI	GGTNACC	1 cut(s)	150
PspGI	CCWGG	2 cut(s)	146, 205
PspN4I	GGNNCC	2 cut(s)	347, 422
PspPI	GGNCC	2 cut(s)	112, 1035
PstI	CTGCAG	1 cut(s)	545
PsuI	RGATCY	1 cut(s)	1410
RsaI	GTAC	4 cut(s)	518, 631, 940, 1103
RsaNI	GTAC	4 cut(s)	517, 630, 939, 1102
SaqAI	TTAA	6 cut(s)	105, 375, 579, 945, 957, 1320
SatI	GCNGC	4 cut(s)	129, 182, 699, 1159
Sau3AI	GATC	3 cut(s)	704, 1111, 1410
Sau96I	GGNCC	2 cut(s)	112, 1035
SchI	GAGTC	3 cut(s)	214, 475, 686
ScrFI	CCNGG	3 cut(s)	148, 207, 763
SduI	GDGCHC	4 cut(s)	74, 91, 355, 463
SexAI	ACCWGGT	1 cut(s)	146
SfaNI	GCATC	2 cut(s)	1075, 1107
SfcI	CTRYAG	1 cut(s)	541
SinI	GGWCC	1 cut(s)	1035
SmlI	CTYRAG	2 cut(s)	245, 356
SmoI	CTYRAG	2 cut(s)	245, 356
Sse9I	AATT	5 cut(s)	314, 655, 668, 905, 977
SsiI	CCGC	5 cut(s)	78, 181, 271, 1041, 1073
SspI	AATATT	1 cut(s)	949
StyD4I	CCNGG	3 cut(s)	146, 205, 761
StyI	CCWWGG	1 cut(s)	285
TaaI	ACNGT	8 cut(s)	304, 387, 441, 458, 516, 629, 724, 1000
TaiI	ACGT	3 cut(s)	596, 738, 1256
TaqI	TCGA	3 cut(s)	330, 474, 1358
TasI	AATT	5 cut(s)	314, 655, 668, 905, 977
TatI	WGTACW	2 cut(s)	516, 1101
TauI	GCSGC	1 cut(s)	184
TfiI	GAWTC	1 cut(s)	1352
Tru1I	TTAA	6 cut(s)	105, 375, 579, 945, 957, 1320
Tru9I	TTAA	6 cut(s)	105, 375, 579, 945, 957, 1320
TscAI	CASTG	6 cut(s)	122, 191, 313, 608, 1216, 1272
TseFI	GTSAC	4 cut(s)	150, 304, 320, 724
TseI	GCWGC	3 cut(s)	128, 698, 1158
Tsp45I	GTSAC	4 cut(s)	150, 304, 320, 724
TspDTI	ATGAA	7 cut(s)	548, 602, 702, 854, 1148, 1343, 1415
TspGWI	ACGGA	1 cut(s)	899
TspRI	CASTG	6 cut(s)	122, 191, 313, 608, 1216, 1272
Van91I	CCANNNNNTGG	1 cut(s)	291
VpaK11BI	GGWCC	1 cut(s)	1035
VspI	ATTAAT	1 cut(s)	957
XapI	RAATTY	2 cut(s)	314, 905
XceI	RCATGY	2 cut(s)	1015, 1281
XmnI	GAANNNNTTC	1 cut(s)	593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.