Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016024

Physical Location & Seq

Genomic Coordinates Reverse (-)

52605559 .. 52607835

Gene Structure 2277 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39626

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCTTCTTCTTCAGTCTCACTCTCCTTCTCTTCTTCTCTTCACCCTCATCCCCTCTCCCCCAACAAGAGCCCCACCGCTCACAGAGCCCAAGACCCCAACTTTAAACCGGCCCACTGCGCCTACGCAGCACCAGCTAAGAGCACTAGGTCTGCTAACTCTTCTTCTTCTTCTTCGTCTTCTCAGACCAGAAAGCGGCACTGGAAGCAAGGTGAATACCCAGGTGTTTCAGAGACTTCCATCCCCAGAAGGACGCCTCTCAAGAATGTCAAGAAGAAGCTTGACCGCAAGGACAAGGCCAAGGCTTGGGTCAACACCGTCACTGAAGAATTCTGTCACTCCATCGACAACAAGCAATGGCTCCGAGCCCTTGAGGTGTTTGAAATGCTTAAAGAGCAACCGTTTTATCAACCGAAAGAAGGGACTTACATGAGGCTCCTTCTTCTGCTCGGACGGTCTGGCCAACCCCAGCGAGCCCAGAGTCTTTTCGACGAAATGGTTGGAGAAGGGTGTCAACCAACTGCTGAACTGTACACAGCCCTGCTTACAGCTTACTGCAGGAGCAATCTTATTCATGACGCGTTTTCTGTTCTCAACCAGATGAAGACGTTCCCTCAGTGCCAGCCGGATGTTTTTACATACAGTACCTTGATAAAGGCTTGCATTGATAATTTGCAGTTTGAATTAGTTGAGTCTTTGTATGAAGAAATGGCTGCACGGTCAATCACTCCAAACACAGTCACCCAAAACGTAGTCCTGAGTGGATATGGTAAGGCCGGGATGTATGACCAGATGGAAAGAGTGTTGTCAGGAATGCTGGAGGGTGAAAGTTGCAAGCCCGATGTTTGGACGATGAATGTTATCCTTACTATTTTTGGTAACAAGGGTCAGATAGAGATGATGGAGAGATGGTATCAGAAATTCCGTGATTTTGGGATTGAGCCAGAAACTCGCACTTTTAATATTCTGATTAATGCTTATGGGAAGAAGAAATTGTATGATAAAATGTCAACTGTGATGGAGTACATGCGCAAGCTTCACTTTCCGTGGACCACCGCAACTTACAATAATGTTATTGAGGCTTTTGCGGATGTGGGAGATGCAAAAAACATGGAGTACACATTTGATCAGATGCGTGCTGAGGACATGAAAGCAGACACCAAAACATTCTGCTGCCTAATAAGAGGGTATGCCAATGCAGGTCTTTTCCATAAGGTGATTAGCAGTGTTCAGTTGGCTGGAAAGTTTGAGATACCTGAAAATACCACGTTTTATAATGCAGTGATATCTGCATGTGCAAAGGCAGATGATTTGATGGAGATGGAGAGAGTTTTTAACCGGATGAAAGAAAAGCAAGTCTCGCCAGATTCCTCGACATATGCTGTCATGGTTGAGGCATATAGACAGGAAGGTATGAACGACAAGATCTACTATTTGGAGCAGGAGATTAGTGCTGATGGTATTCAAACCGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009553 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0019843 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0051704 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

491

Amino Acids

55.89

Weight (kDa)

7.09

Isoelectric Point (pI)

49.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	161 - 224	2.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	170 - 202	1.2e-07	PPR repeat
PPR_2	PF13041	175 - 221	1.7e-12	PPR repeat family
PPR_2	PF13041	209 - 257	2e-10	PPR repeat family
PPR_3	PF13812	232 - 294	3.9e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	244 - 289	9.8e-07	PPR repeat family
PPR_2	PF13041	280 - 328	2.5e-08	PPR repeat family
PPR_2	PF13041	352 - 399	6.5e-07	PPR repeat family
PPR_long	PF17177	413 - 489	5.7e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	421 - 467	1.2e-10	PPR repeat family
PPR_3	PF13812	421 - 467	6.5e-07	Pentatricopeptide repeat domain
PPR	PF01535	425 - 452	5.2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016024)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06430
fragaria_vesca	FvH4_4g21400
malus_domestica	MD13G1141500.v1.1 MD16G1137800.v1.1
prunus_persica	Prupe.1G106700_v2.0.a1
pyrus_communis	pycom13g12300 pycom16g12170
rosa_chinensis	RchiOBHm_Chr4g0427331
rosa_multiflora	Rmu_sc0008400.1_g000001
rosa_rugosa	Rorug04G0216700
rosa_samantha	Rh4AG273000 Rh4BG278700 Rh4CG294000 Rh4DG276100
rosa_wichuraiana	Rw4G023690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1275
Acc16I	TGCGCA	1 cut(s)	1031
Acc36I	ACCTGC	1 cut(s)	1190
AccB7I	CCANNNNNTGG	1 cut(s)	306
AccBSI	CCGCTC	1 cut(s)	80
AccII	CGCG	1 cut(s)	581
AciI	CCGC	5 cut(s)	78, 196, 286, 1056, 1088
AcoI	YGGCCR	1 cut(s)	460
AcsI	RAATTY	2 cut(s)	329, 920
AcuI	CTGAAG	1 cut(s)	345
AcyI	GRCGYC	1 cut(s)	254
AfaI	GTAC	4 cut(s)	533, 646, 1025, 1118
AfiI	CCNNNNNNNGG	4 cut(s)	195, 306, 419, 846
AflIII	ACRYGT	1 cut(s)	579
AgsI	TTSAA	3 cut(s)	383, 683, 1466
AjnI	CCWGG	1 cut(s)	220
AluBI	AGCT	4 cut(s)	137, 280, 551, 1036
AluI	AGCT	4 cut(s)	137, 280, 551, 1036
Alw21I	GWGCWC	1 cut(s)	146
Alw26I	GTCTC	3 cut(s)	22, 227, 1363
AoxI	GGCC	4 cut(s)	111, 297, 460, 774
ApeKI	GCWGC	3 cut(s)	128, 713, 1173
ApoI	RAATTY	2 cut(s)	329, 920
AseI	ATTAAT	1 cut(s)	972
Asp700I	GAANNNNTTC	1 cut(s)	608
AspLEI	GCGC	2 cut(s)	122, 1032
AspS9I	GGNCC	2 cut(s)	112, 1050
AsuC2I	CCSGG	1 cut(s)	778
AsuHPI	GGTGA	5 cut(s)	35, 224, 733, 836, 1228
AvaII	GGWCC	1 cut(s)	1050
BalI	TGGCCA	1 cut(s)	462
BanII	GRGCYC	4 cut(s)	74, 91, 370, 478
BbsI	GAAGAC	2 cut(s)	171, 611
Bbv12I	GWGCWC	1 cut(s)	146
BbvCI	CCTCAGC	1 cut(s)	1140
BbvI	GCAGC	3 cut(s)	140, 700, 1160
BccI	CCATC	9 cut(s)	248, 350, 787, 895, 903, 1012, 1309, 1315, 1451
BciT130I	CCWGG	1 cut(s)	222
BclI	TGATCA	1 cut(s)	1126
BcnI	CCSGG	1 cut(s)	778
BcoDI	GTCTC	3 cut(s)	22, 227, 1363
BfaI	CTAG	1 cut(s)	147
BfmI	CTRYAG	1 cut(s)	556
BfuAI	ACCTGC	1 cut(s)	1190
BglII	AGATCT	1 cut(s)	1425
BisI	GCNGC	4 cut(s)	129, 197, 714, 1174
BlsI	GCNGC	4 cut(s)	130, 198, 715, 1175
Bme1390I	CCNGG	2 cut(s)	222, 778
Bme18I	GGWCC	1 cut(s)	1050
BmgT120I	GGNCC	2 cut(s)	112, 1050
BmiI	GGNNCC	2 cut(s)	362, 437
BmrFI	CCNGG	2 cut(s)	222, 778
BmsI	GCATC	2 cut(s)	1090, 1122
BpiI	GAAGAC	2 cut(s)	171, 611
BpmI	CTGGAG	1 cut(s)	839
Bpu10I	CCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	2 cut(s)	245, 392
BpuMI	CCSGG	1 cut(s)	778
BsaHI	GRCGYC	1 cut(s)	254
BsaJI	CCNNGG	3 cut(s)	220, 300, 1046
BsaWI	WCCGGW	1 cut(s)	1338
BsaXI	ACNNNNNCTCC	2 cut(s)	896, 926
Bsc4I	CCNNNNNNNGG	4 cut(s)	195, 306, 419, 846
Bse118I	RCCGGY	1 cut(s)	109
Bse1I	ACTGG	1 cut(s)	206
Bse3DI	GCAATG	1 cut(s)	362
BseBI	CCWGG	1 cut(s)	222
BseDI	CCNNGG	3 cut(s)	220, 300, 1046
BseGI	GGATG	6 cut(s)	49, 240, 634, 786, 1096, 1347
BseLI	CCNNNNNNNGG	4 cut(s)	195, 306, 419, 846
BseMI	GCAATG	1 cut(s)	362
BseMII	CTCAG	4 cut(s)	197, 629, 749, 1131
BseNI	ACTGG	1 cut(s)	206
BseXI	GCAGC	3 cut(s)	140, 700, 1160
BseYI	CCCAGC	1 cut(s)	468
BsgI	GTGCAG	1 cut(s)	699
Bsh1236I	CGCG	1 cut(s)	581
BshFI	GGCC	4 cut(s)	113, 299, 462, 776
BsiHKAI	GWGCWC	1 cut(s)	146
BsiSI	CCGG	4 cut(s)	110, 626, 777, 1339
BslFI	GGGAC	1 cut(s)	436
BslI	CCNNNNNNNGG	4 cut(s)	195, 306, 419, 846
BsmAI	GTCTC	3 cut(s)	22, 227, 1363
BsmFI	GGGAC	1 cut(s)	436
BsmI	GAATGC	1 cut(s)	819
BsnI	GGCC	4 cut(s)	113, 299, 462, 776
Bsp1286I	GDGCHC	5 cut(s)	74, 91, 146, 370, 478
Bsp1407I	TGTACA	1 cut(s)	531
Bsp143I	GATC	2 cut(s)	1126, 1425
BspACI	CCGC	5 cut(s)	78, 196, 286, 1056, 1088
BspANI	GGCC	4 cut(s)	113, 299, 462, 776
BspCNI	CTCAG	4 cut(s)	196, 628, 750, 1132
BspFNI	CGCG	1 cut(s)	581
BspHI	TCATGA	1 cut(s)	574
BspLI	GGNNCC	2 cut(s)	362, 437
BspMAI	CTGCAG	1 cut(s)	560
BspMI	ACCTGC	1 cut(s)	1190
BsrBI	CCGCTC	1 cut(s)	80
BsrDI	GCAATG	1 cut(s)	362
BsrFI	RCCGGY	1 cut(s)	109
BsrGI	TGTACA	1 cut(s)	531
BsrI	ACTGG	1 cut(s)	206
BssAI	RCCGGY	1 cut(s)	109
BssECI	CCNNGG	3 cut(s)	220, 300, 1046
BssMI	GATC	2 cut(s)	1126, 1425
BssNI	GRCGYC	1 cut(s)	254
BssT1I	CCWWGG	1 cut(s)	300
Bst2UI	CCWGG	1 cut(s)	222
Bst4CI	ACNGT	8 cut(s)	319, 402, 456, 531, 644, 720, 739, 1015
Bst6I	CTCTTC	3 cut(s)	37, 45, 166
BstACI	GRCGYC	1 cut(s)	254
BstAUI	TGTACA	1 cut(s)	531
BstC8I	GCNNGC	6 cut(s)	474, 623, 661, 836, 1034, 1137
BstDEI	CTNAG	5 cut(s)	138, 183, 615, 758, 1140
BstDSI	CCRYGG	1 cut(s)	1046
BstF5I	GGATG	6 cut(s)	49, 240, 634, 786, 1096, 1347
BstFNI	CGCG	1 cut(s)	581
BstHHI	GCGC	2 cut(s)	122, 1032
BstKTI	GATC	2 cut(s)	1129, 1428
BstMAI	GTCTC	3 cut(s)	22, 227, 1363
BstMBI	GATC	2 cut(s)	1126, 1425
BstMWI	GCNNNNNNNGC	7 cut(s)	86, 119, 128, 134, 205, 394, 1360
BstNI	CCWGG	1 cut(s)	222
BstNSI	RCATGY	2 cut(s)	1030, 1296
BstSCI	CCNGG	2 cut(s)	220, 776
BstSFI	CTRYAG	1 cut(s)	556
BstUI	CGCG	1 cut(s)	581
BstV1I	GCAGC	3 cut(s)	140, 700, 1160
BstV2I	GAAGAC	2 cut(s)	171, 611
BstX2I	RGATCY	1 cut(s)	1425
BstYI	RGATCY	1 cut(s)	1425
BsuRI	GGCC	4 cut(s)	113, 299, 462, 776
BtgI	CCRYGG	1 cut(s)	1046
BtsCI	GGATG	6 cut(s)	49, 240, 634, 786, 1096, 1347
BtsI	GCAGTG	3 cut(s)	115, 1231, 1287
BtsIMutI	CAGTG	6 cut(s)	115, 199, 321, 623, 1231, 1287
BveI	ACCTGC	1 cut(s)	1190
Cac8I	GCNNGC	6 cut(s)	474, 623, 661, 836, 1034, 1137
CciI	TCATGA	1 cut(s)	574
CfoI	GCGC	2 cut(s)	122, 1032
Cfr10I	RCCGGY	1 cut(s)	109
Cfr13I	GGNCC	2 cut(s)	112, 1050
CseI	GACGC	2 cut(s)	262, 587
Csp6I	GTAC	4 cut(s)	532, 645, 1024, 1117
CviAII	CATG	7 cut(s)	430, 575, 1027, 1111, 1147, 1293, 1387
CviQI	GTAC	4 cut(s)	532, 645, 1024, 1117
DdeI	CTNAG	5 cut(s)	138, 183, 615, 758, 1140
DpnI	GATC	2 cut(s)	1128, 1427
DpnII	GATC	2 cut(s)	1126, 1425
DraI	TTTAAA	1 cut(s)	106
EaeI	YGGCCR	1 cut(s)	460
Eam1104I	CTCTTC	3 cut(s)	37, 45, 166
EarI	CTCTTC	3 cut(s)	37, 45, 166
Eco130I	CCWWGG	1 cut(s)	300
Eco24I	GRGCYC	4 cut(s)	74, 91, 370, 478
Eco32I	GATATC	1 cut(s)	1287
Eco47I	GGWCC	1 cut(s)	1050
Eco57I	CTGAAG	1 cut(s)	345
EcoRI	GAATTC	1 cut(s)	329
EcoRII	CCWGG	1 cut(s)	220
EcoRV	GATATC	1 cut(s)	1287
EcoT14I	CCWWGG	1 cut(s)	300
EcoT38I	GRGCYC	4 cut(s)	74, 91, 370, 478
ErhI	CCWWGG	1 cut(s)	300
FaeI	CATG	7 cut(s)	433, 578, 1030, 1114, 1150, 1296, 1390
FalI	AAGNNNNNCTT	2 cut(s)	1025, 1057
FaqI	GGGAC	1 cut(s)	436
FatI	CATG	7 cut(s)	429, 574, 1026, 1110, 1146, 1292, 1386
FauNDI	CATATG	1 cut(s)	1378
FbaI	TGATCA	1 cut(s)	1126
Fnu4HI	GCNGC	4 cut(s)	129, 197, 714, 1174
FokI	GGATG	6 cut(s)	36, 227, 641, 793, 1103, 1354
FriOI	GRGCYC	4 cut(s)	74, 91, 370, 478
Fsp4HI	GCNGC	4 cut(s)	129, 197, 714, 1174
FspBI	CTAG	1 cut(s)	147
FspI	TGCGCA	1 cut(s)	1031
GlaI	GCGC	2 cut(s)	121, 1031
GluI	GCNGC	4 cut(s)	129, 197, 714, 1174
GsaI	CCCAGC	1 cut(s)	472
GsuI	CTGGAG	1 cut(s)	839
HaeIII	GGCC	4 cut(s)	113, 299, 462, 776
HapII	CCGG	4 cut(s)	110, 626, 777, 1339
HgaI	GACGC	2 cut(s)	262, 587
HhaI	GCGC	2 cut(s)	122, 1032
Hin1I	GRCGYC	1 cut(s)	254
Hin1II	CATG	7 cut(s)	433, 578, 1030, 1114, 1150, 1296, 1390
Hin6I	GCGC	2 cut(s)	120, 1030
HinP1I	GCGC	2 cut(s)	120, 1030
HincII	GTYRAC	3 cut(s)	313, 515, 1011
HindII	GTYRAC	3 cut(s)	313, 515, 1011
HindIII	AAGCTT	2 cut(s)	278, 1034
HinfI	GANTC	3 cut(s)	481, 692, 1367
HpaII	CCGG	4 cut(s)	110, 626, 777, 1339
HphI	GGTGA	5 cut(s)	35, 224, 733, 836, 1228
Hpy166II	GTNNAC	6 cut(s)	313, 515, 534, 1011, 1050, 1119
Hpy188I	TCNGA	8 cut(s)	186, 232, 365, 452, 891, 918, 969, 1131
Hpy188III	TCNNGA	5 cut(s)	262, 271, 575, 757, 810
Hpy8I	GTNNAC	6 cut(s)	313, 515, 534, 1011, 1050, 1119
Hpy99I	CGWCG	1 cut(s)	494
HpyAV	CCTTC	6 cut(s)	37, 243, 413, 449, 500, 1403
HpyCH4III	ACNGT	8 cut(s)	319, 402, 456, 531, 644, 720, 739, 1015
HpyCH4IV	ACGT	3 cut(s)	608, 750, 1268
HpyF10VI	GCNNNNNNNGC	7 cut(s)	86, 119, 128, 134, 205, 394, 1360
HpyF3I	CTNAG	5 cut(s)	138, 183, 615, 758, 1140
HpySE526I	ACGT	3 cut(s)	608, 750, 1268
Hsp92I	GRCGYC	1 cut(s)	254
Hsp92II	CATG	7 cut(s)	433, 578, 1030, 1114, 1150, 1296, 1390
HspAI	GCGC	2 cut(s)	120, 1030
Ksp22I	TGATCA	1 cut(s)	1126
Kzo9I	GATC	2 cut(s)	1126, 1425
LmnI	GCTCC	4 cut(s)	366, 441, 561, 1438
Lsp1109I	GCAGC	3 cut(s)	140, 700, 1160
LweI	GCATC	2 cut(s)	1090, 1122
MaeI	CTAG	1 cut(s)	147
MaeII	ACGT	3 cut(s)	608, 750, 1268
MaeIII	GTNAC	4 cut(s)	319, 335, 739, 878
MalI	GATC	2 cut(s)	1128, 1427
MbiI	CCGCTC	1 cut(s)	80
MboI	GATC	2 cut(s)	1126, 1425
MflI	RGATCY	1 cut(s)	1425
MhlI	GDGCHC	5 cut(s)	74, 91, 146, 370, 478
MlsI	TGGCCA	1 cut(s)	462
MluCI	AATT	5 cut(s)	329, 670, 683, 920, 992
MluI	ACGCGT	1 cut(s)	579
MluNI	TGGCCA	1 cut(s)	462
MlyI	GAGTC	2 cut(s)	490, 701
MmeI	TCCRAC	1 cut(s)	481
Mox20I	TGGCCA	1 cut(s)	462
MroXI	GAANNNNTTC	1 cut(s)	608
MscI	TGGCCA	1 cut(s)	462
MseI	TTAA	5 cut(s)	105, 390, 960, 972, 1335
Msp20I	TGGCCA	1 cut(s)	462
MspI	CCGG	4 cut(s)	110, 626, 777, 1339
MspR9I	CCNGG	2 cut(s)	222, 778
Mva1269I	GAATGC	1 cut(s)	819
MvaI	CCWGG	1 cut(s)	222
MvnI	CGCG	1 cut(s)	581
MwoI	GCNNNNNNNGC	7 cut(s)	86, 119, 128, 134, 205, 394, 1360
NciI	CCSGG	1 cut(s)	778
NdeI	CATATG	1 cut(s)	1378
NdeII	GATC	2 cut(s)	1126, 1425
NlaIII	CATG	7 cut(s)	433, 578, 1030, 1114, 1150, 1296, 1390
NlaIV	GGNNCC	2 cut(s)	362, 437
NmuCI	GTSAC	3 cut(s)	319, 335, 739
NsbI	TGCGCA	1 cut(s)	1031
NspI	RCATGY	2 cut(s)	1030, 1296
PagI	TCATGA	1 cut(s)	574
PctI	GAATGC	1 cut(s)	819
PdmI	GAANNNNTTC	1 cut(s)	608
PfeI	GAWTC	1 cut(s)	1367
PflMI	CCANNNNNTGG	1 cut(s)	306
PkrI	GCNGC	4 cut(s)	130, 198, 715, 1175
PleI	GAGTC	2 cut(s)	489, 700
PpsI	GAGTC	2 cut(s)	489, 700
PshBI	ATTAAT	1 cut(s)	972
PsiI	TTATAA	1 cut(s)	1275
Psp6I	CCWGG	1 cut(s)	220
PspFI	CCCAGC	1 cut(s)	468
PspGI	CCWGG	1 cut(s)	220
PspN4I	GGNNCC	2 cut(s)	362, 437
PspPI	GGNCC	2 cut(s)	112, 1050
PstI	CTGCAG	1 cut(s)	560
PsuI	RGATCY	1 cut(s)	1425
RsaI	GTAC	4 cut(s)	533, 646, 1025, 1118
RsaNI	GTAC	4 cut(s)	532, 645, 1024, 1117
SaqAI	TTAA	5 cut(s)	105, 390, 960, 972, 1335
SatI	GCNGC	4 cut(s)	129, 197, 714, 1174
Sau3AI	GATC	2 cut(s)	1126, 1425
Sau96I	GGNCC	2 cut(s)	112, 1050
SchI	GAGTC	2 cut(s)	490, 701
ScrFI	CCNGG	2 cut(s)	222, 778
SduI	GDGCHC	5 cut(s)	74, 91, 146, 370, 478
SfaNI	GCATC	2 cut(s)	1090, 1122
SfcI	CTRYAG	1 cut(s)	556
SinI	GGWCC	1 cut(s)	1050
SmlI	CTYRAG	2 cut(s)	260, 371
SmoI	CTYRAG	2 cut(s)	260, 371
Sse9I	AATT	5 cut(s)	329, 670, 683, 920, 992
SsiI	CCGC	5 cut(s)	78, 196, 286, 1056, 1088
SspI	AATATT	1 cut(s)	964
SspMI	CTAG	1 cut(s)	147
StyD4I	CCNGG	2 cut(s)	220, 776
StyI	CCWWGG	1 cut(s)	300
TaaI	ACNGT	8 cut(s)	319, 402, 456, 531, 644, 720, 739, 1015
TaiI	ACGT	3 cut(s)	611, 753, 1271
TaqI	TCGA	3 cut(s)	345, 489, 1373
TasI	AATT	5 cut(s)	329, 670, 683, 920, 992
TatI	WGTACW	3 cut(s)	531, 1023, 1116
TauI	GCSGC	1 cut(s)	199
TfiI	GAWTC	1 cut(s)	1367
Tru1I	TTAA	5 cut(s)	105, 390, 960, 972, 1335
Tru9I	TTAA	5 cut(s)	105, 390, 960, 972, 1335
TscAI	CASTG	6 cut(s)	122, 206, 328, 623, 1231, 1287
TseFI	GTSAC	3 cut(s)	319, 335, 739
TseI	GCWGC	3 cut(s)	128, 713, 1173
Tsp45I	GTSAC	3 cut(s)	319, 335, 739
TspDTI	ATGAA	7 cut(s)	563, 617, 717, 869, 1163, 1358, 1430
TspGWI	ACGGA	2 cut(s)	914, 1035
TspRI	CASTG	6 cut(s)	122, 206, 328, 623, 1231, 1287
Van91I	CCANNNNNTGG	1 cut(s)	306
VpaK11BI	GGWCC	1 cut(s)	1050
VspI	ATTAAT	1 cut(s)	972
XapI	RAATTY	2 cut(s)	329, 920
XceI	RCATGY	2 cut(s)	1030, 1296
XmnI	GAANNNNTTC	1 cut(s)	608
XspI	CTAG	1 cut(s)	147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.