PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom05g22680 pycom13g22920 |
| rosa_multiflora | Rmu_co8298551.1_g000001 |
| rosa_samantha | Rh5CG161900 Rh5CG185200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccBSI | CCGCTC | 1 cut(s) | 321 |
| AciI | CCGC | 2 cut(s) | 321, 382 |
| AclWI | GGATC | 1 cut(s) | 167 |
| AcsI | RAATTY | 1 cut(s) | 156 |
| AcvI | CACGTG | 1 cut(s) | 165 |
| AdeI | CACNNNGTG | 1 cut(s) | 168 |
| AfaI | GTAC | 2 cut(s) | 47, 386 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 299 |
| AgsI | TTSAA | 1 cut(s) | 355 |
| AluBI | AGCT | 4 cut(s) | 13, 256, 358, 399 |
| AluI | AGCT | 4 cut(s) | 13, 256, 358, 399 |
| AlwI | GGATC | 1 cut(s) | 167 |
| AoxI | GGCC | 1 cut(s) | 227 |
| ApeKI | GCWGC | 2 cut(s) | 269, 272 |
| ApoI | RAATTY | 1 cut(s) | 156 |
| AsuC2I | CCSGG | 1 cut(s) | 294 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 211 |
| BbrPI | CACGTG | 1 cut(s) | 165 |
| BbvI | GCAGC | 2 cut(s) | 256, 259 |
| BccI | CCATC | 3 cut(s) | 187, 238, 325 |
| BcnI | CCSGG | 1 cut(s) | 294 |
| BfaI | CTAG | 1 cut(s) | 359 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 332 |
| BisI | GCNGC | 2 cut(s) | 270, 273 |
| BlsI | GCNGC | 2 cut(s) | 271, 274 |
| Bme1390I | CCNGG | 1 cut(s) | 294 |
| BmiI | GGNNCC | 3 cut(s) | 6, 210, 325 |
| BmrFI | CCNGG | 1 cut(s) | 294 |
| Bpu10I | CCTNAGC | 3 cut(s) | 9, 213, 257 |
| BpuMI | CCSGG | 1 cut(s) | 294 |
| BsaAI | YACGTR | 1 cut(s) | 165 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 117, 147 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 299 |
| Bse3DI | GCAATG | 1 cut(s) | 282 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 299 |
| BseMI | GCAATG | 1 cut(s) | 282 |
| BseMII | CTCAG | 2 cut(s) | 204, 263 |
| BseXI | GCAGC | 2 cut(s) | 256, 259 |
| BshFI | GGCC | 1 cut(s) | 229 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiSI | CCGG | 1 cut(s) | 294 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 299 |
| BsnI | GGCC | 1 cut(s) | 229 |
| Bsp1286I | GDGCHC | 1 cut(s) | 211 |
| Bsp143I | GATC | 3 cut(s) | 172, 338, 371 |
| BspACI | CCGC | 2 cut(s) | 321, 382 |
| BspANI | GGCC | 1 cut(s) | 229 |
| BspCNI | CTCAG | 2 cut(s) | 205, 262 |
| BspLI | GGNNCC | 3 cut(s) | 6, 210, 325 |
| BspPI | GGATC | 1 cut(s) | 167 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BsrBI | CCGCTC | 1 cut(s) | 321 |
| BsrDI | GCAATG | 1 cut(s) | 282 |
| BssMI | GATC | 3 cut(s) | 172, 338, 371 |
| BstBAI | YACGTR | 1 cut(s) | 165 |
| BstDEI | CTNAG | 5 cut(s) | 9, 17, 213, 249, 257 |
| BstKTI | GATC | 3 cut(s) | 175, 341, 374 |
| BstMBI | GATC | 3 cut(s) | 172, 338, 371 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 332, 396 |
| BstSCI | CCNGG | 1 cut(s) | 292 |
| BstV1I | GCAGC | 2 cut(s) | 256, 259 |
| BsuRI | GGCC | 1 cut(s) | 229 |
| CseI | GACGC | 1 cut(s) | 137 |
| Csp6I | GTAC | 2 cut(s) | 46, 385 |
| CviAII | CATG | 2 cut(s) | 34, 328 |
| CviQI | GTAC | 2 cut(s) | 46, 385 |
| DdeI | CTNAG | 5 cut(s) | 9, 17, 213, 249, 257 |
| DpnI | GATC | 3 cut(s) | 174, 340, 373 |
| DpnII | GATC | 3 cut(s) | 172, 338, 371 |
| DraIII | CACNNNGTG | 1 cut(s) | 168 |
| Eco24I | GRGCYC | 1 cut(s) | 211 |
| Eco72I | CACGTG | 1 cut(s) | 165 |
| EcoT22I | ATGCAT | 1 cut(s) | 108 |
| EcoT38I | GRGCYC | 1 cut(s) | 211 |
| FaeI | CATG | 2 cut(s) | 37, 331 |
| FatI | CATG | 2 cut(s) | 33, 327 |
| Fnu4HI | GCNGC | 2 cut(s) | 270, 273 |
| FriOI | GRGCYC | 1 cut(s) | 211 |
| Fsp4HI | GCNGC | 2 cut(s) | 270, 273 |
| FspBI | CTAG | 1 cut(s) | 359 |
| GluI | GCNGC | 2 cut(s) | 270, 273 |
| HaeIII | GGCC | 1 cut(s) | 229 |
| HapII | CCGG | 1 cut(s) | 294 |
| HgaI | GACGC | 1 cut(s) | 137 |
| Hin1II | CATG | 2 cut(s) | 37, 331 |
| HpaII | CCGG | 1 cut(s) | 294 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 136 |
| Hpy188I | TCNGA | 4 cut(s) | 241, 252, 343, 376 |
| Hpy188III | TCNNGA | 2 cut(s) | 176, 212 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 136 |
| HpyAV | CCTTC | 1 cut(s) | 228 |
| HpyCH4IV | ACGT | 2 cut(s) | 164, 346 |
| HpyCH4V | TGCA | 2 cut(s) | 106, 275 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 332, 396 |
| HpyF3I | CTNAG | 5 cut(s) | 9, 17, 213, 249, 257 |
| HpySE526I | ACGT | 2 cut(s) | 164, 346 |
| Hsp92II | CATG | 2 cut(s) | 37, 331 |
| Kzo9I | GATC | 3 cut(s) | 172, 338, 371 |
| LmnI | GCTCC | 3 cut(s) | 214, 318, 323 |
| LpnPI | CCDG | 4 cut(s) | 21, 189, 225, 307 |
| Lsp1109I | GCAGC | 2 cut(s) | 256, 259 |
| MaeI | CTAG | 1 cut(s) | 359 |
| MaeII | ACGT | 2 cut(s) | 164, 346 |
| MaeIII | GTNAC | 1 cut(s) | 29 |
| MalI | GATC | 3 cut(s) | 174, 340, 373 |
| MbiI | CCGCTC | 1 cut(s) | 321 |
| MboI | GATC | 3 cut(s) | 172, 338, 371 |
| MhlI | GDGCHC | 1 cut(s) | 211 |
| MluCI | AATT | 4 cut(s) | 57, 120, 156, 280 |
| MnlI | CCTC | 3 cut(s) | 119, 162, 219 |
| Mph1103I | ATGCAT | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 294 |
| MspR9I | CCNGG | 1 cut(s) | 294 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 332, 396 |
| NciI | CCSGG | 1 cut(s) | 294 |
| NdeII | GATC | 3 cut(s) | 172, 338, 371 |
| NlaIII | CATG | 2 cut(s) | 37, 331 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 210, 325 |
| NsiI | ATGCAT | 1 cut(s) | 108 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 343 |
| PkrI | GCNGC | 2 cut(s) | 271, 274 |
| PmaCI | CACGTG | 1 cut(s) | 165 |
| PmlI | CACGTG | 1 cut(s) | 165 |
| Ppu21I | YACGTR | 1 cut(s) | 165 |
| PspCI | CACGTG | 1 cut(s) | 165 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 210, 325 |
| RsaI | GTAC | 2 cut(s) | 47, 386 |
| RsaNI | GTAC | 2 cut(s) | 46, 385 |
| SatI | GCNGC | 2 cut(s) | 270, 273 |
| Sau3AI | GATC | 3 cut(s) | 172, 338, 371 |
| ScrFI | CCNGG | 1 cut(s) | 294 |
| SduI | GDGCHC | 1 cut(s) | 211 |
| SetI | ASST | 8 cut(s) | 10, 15, 130, 167, 258, 349, 360, 401 |
| Sse9I | AATT | 4 cut(s) | 57, 120, 156, 280 |
| SsiI | CCGC | 2 cut(s) | 321, 382 |
| SspMI | CTAG | 1 cut(s) | 359 |
| StyD4I | CCNGG | 1 cut(s) | 292 |
| TaiI | ACGT | 2 cut(s) | 167, 349 |
| TasI | AATT | 4 cut(s) | 57, 120, 156, 280 |
| TatI | WGTACW | 1 cut(s) | 45 |
| TseI | GCWGC | 2 cut(s) | 269, 272 |
| TspDTI | ATGAA | 3 cut(s) | 102, 293, 296 |
| TspGWI | ACGGA | 1 cut(s) | 331 |
| XapI | RAATTY | 1 cut(s) | 156 |
| XspI | CTAG | 1 cut(s) | 359 |
| Zsp2I | ATGCAT | 1 cut(s) | 108 |