PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom05g22680 pycom13g22920 |
| rosa_multiflora | Rmu_co8298551.1_g000001 |
| rosa_samantha | Rh5CG161900 Rh5CG185200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 130 |
| AccI | GTMKAC | 1 cut(s) | 18 |
| AciI | CCGC | 2 cut(s) | 331, 354 |
| AclWI | GGATC | 1 cut(s) | 314 |
| AfaI | GTAC | 1 cut(s) | 264 |
| AjnI | CCWGG | 1 cut(s) | 408 |
| AluBI | AGCT | 2 cut(s) | 14, 380 |
| AluI | AGCT | 2 cut(s) | 14, 380 |
| AlwI | GGATC | 1 cut(s) | 314 |
| AoxI | GGCC | 2 cut(s) | 254, 312 |
| ApaI | GGGCCC | 1 cut(s) | 316 |
| ApeKI | GCWGC | 1 cut(s) | 377 |
| AspS9I | GGNCC | 2 cut(s) | 312, 313 |
| BaeGI | GKGCMC | 1 cut(s) | 316 |
| BanII | GRGCYC | 1 cut(s) | 316 |
| BbvI | GCAGC | 1 cut(s) | 389 |
| BccI | CCATC | 3 cut(s) | 265, 292, 343 |
| BciT130I | CCWGG | 1 cut(s) | 410 |
| BfmI | CTRYAG | 1 cut(s) | 375 |
| BfuAI | ACCTGC | 1 cut(s) | 130 |
| BisI | GCNGC | 2 cut(s) | 354, 378 |
| BlsI | GCNGC | 2 cut(s) | 355, 379 |
| Bme1390I | CCNGG | 1 cut(s) | 410 |
| BmgT120I | GGNCC | 2 cut(s) | 312, 313 |
| BmiI | GGNNCC | 3 cut(s) | 195, 314, 315 |
| BmrFI | CCNGG | 1 cut(s) | 410 |
| BmsI | GCATC | 3 cut(s) | 96, 171, 268 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 222, 252 |
| BseBI | CCWGG | 1 cut(s) | 410 |
| BseRI | GAGGAG | 1 cut(s) | 206 |
| BseSI | GKGCMC | 1 cut(s) | 316 |
| BseXI | GCAGC | 1 cut(s) | 389 |
| BseYI | CCCAGC | 1 cut(s) | 309 |
| BshFI | GGCC | 2 cut(s) | 256, 314 |
| BsnI | GGCC | 2 cut(s) | 256, 314 |
| Bsp120I | GGGCCC | 1 cut(s) | 312 |
| Bsp1286I | GDGCHC | 1 cut(s) | 316 |
| Bsp143I | GATC | 1 cut(s) | 319 |
| BspACI | CCGC | 2 cut(s) | 331, 354 |
| BspANI | GGCC | 2 cut(s) | 256, 314 |
| BspLI | GGNNCC | 3 cut(s) | 195, 314, 315 |
| BspMAI | CTGCAG | 1 cut(s) | 379 |
| BspMI | ACCTGC | 1 cut(s) | 130 |
| BspPI | GGATC | 1 cut(s) | 314 |
| BssMI | GATC | 1 cut(s) | 319 |
| Bst2UI | CCWGG | 1 cut(s) | 410 |
| Bst4CI | ACNGT | 2 cut(s) | 328, 360 |
| BstC8I | GCNNGC | 1 cut(s) | 382 |
| BstDEI | CTNAG | 1 cut(s) | 390 |
| BstKTI | GATC | 1 cut(s) | 322 |
| BstMBI | GATC | 1 cut(s) | 319 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 400 |
| BstNI | CCWGG | 1 cut(s) | 410 |
| BstNSI | RCATGY | 1 cut(s) | 113 |
| BstSCI | CCNGG | 1 cut(s) | 408 |
| BstSFI | CTRYAG | 1 cut(s) | 375 |
| BstSLI | GKGCMC | 1 cut(s) | 316 |
| BstV1I | GCAGC | 1 cut(s) | 389 |
| BsuRI | GGCC | 2 cut(s) | 256, 314 |
| BtsIMutI | CAGTG | 1 cut(s) | 324 |
| BveI | ACCTGC | 1 cut(s) | 130 |
| Cac8I | GCNNGC | 1 cut(s) | 382 |
| Cfr13I | GGNCC | 2 cut(s) | 312, 313 |
| CsiI | ACCWGGT | 1 cut(s) | 408 |
| Csp6I | GTAC | 1 cut(s) | 263 |
| CviAII | CATG | 1 cut(s) | 110 |
| CviJI | RGCY | 8 cut(s) | 14, 95, 196, 256, 314, 380, 394, 416 |
| CviKI_1 | RGCY | 8 cut(s) | 14, 95, 196, 256, 314, 380, 394, 416 |
| CviQI | GTAC | 1 cut(s) | 263 |
| DdeI | CTNAG | 1 cut(s) | 390 |
| DpnI | GATC | 1 cut(s) | 321 |
| DpnII | GATC | 1 cut(s) | 319 |
| EciI | GGCGGA | 1 cut(s) | 320 |
| Eco24I | GRGCYC | 1 cut(s) | 316 |
| EcoO109I | RGGNCCY | 1 cut(s) | 313 |
| EcoRII | CCWGG | 1 cut(s) | 408 |
| EcoT22I | ATGCAT | 2 cut(s) | 111, 213 |
| EcoT38I | GRGCYC | 1 cut(s) | 316 |
| FaeI | CATG | 1 cut(s) | 113 |
| FaiI | YATR | 5 cut(s) | 111, 172, 201, 209, 227 |
| FatI | CATG | 1 cut(s) | 109 |
| FblI | GTMKAC | 1 cut(s) | 18 |
| Fnu4HI | GCNGC | 2 cut(s) | 354, 378 |
| FriOI | GRGCYC | 1 cut(s) | 316 |
| Fsp4HI | GCNGC | 2 cut(s) | 354, 378 |
| GluI | GCNGC | 2 cut(s) | 354, 378 |
| GsaI | CCCAGC | 1 cut(s) | 313 |
| HaeIII | GGCC | 2 cut(s) | 256, 314 |
| Hin1II | CATG | 1 cut(s) | 113 |
| HincII | GTYRAC | 1 cut(s) | 19 |
| HindII | GTYRAC | 1 cut(s) | 19 |
| HinfI | GANTC | 1 cut(s) | 178 |
| Hpy166II | GTNNAC | 1 cut(s) | 19 |
| Hpy8I | GTNNAC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 2 cut(s) | 328, 360 |
| HpyCH4IV | ACGT | 1 cut(s) | 129 |
| HpyCH4V | TGCA | 4 cut(s) | 28, 109, 211, 377 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 400 |
| HpyF3I | CTNAG | 1 cut(s) | 390 |
| HpySE526I | ACGT | 1 cut(s) | 129 |
| Hsp92II | CATG | 1 cut(s) | 113 |
| Kzo9I | GATC | 1 cut(s) | 319 |
| LmnI | GCTCC | 2 cut(s) | 193, 218 |
| LpnPI | CCDG | 4 cut(s) | 125, 295, 330, 395 |
| Lsp1109I | GCAGC | 1 cut(s) | 389 |
| LweI | GCATC | 3 cut(s) | 96, 171, 268 |
| MabI | ACCWGGT | 1 cut(s) | 408 |
| MaeII | ACGT | 1 cut(s) | 129 |
| MalI | GATC | 1 cut(s) | 321 |
| MboI | GATC | 1 cut(s) | 319 |
| MhlI | GDGCHC | 1 cut(s) | 316 |
| MluCI | AATT | 1 cut(s) | 348 |
| MnlI | CCTC | 4 cut(s) | 50, 184, 224, 246 |
| Mph1103I | ATGCAT | 2 cut(s) | 111, 213 |
| MspR9I | CCNGG | 1 cut(s) | 410 |
| MvaI | CCWGG | 1 cut(s) | 410 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 400 |
| NdeII | GATC | 1 cut(s) | 319 |
| NlaIII | CATG | 1 cut(s) | 113 |
| NlaIV | GGNNCC | 3 cut(s) | 195, 314, 315 |
| NsiI | ATGCAT | 2 cut(s) | 111, 213 |
| NspI | RCATGY | 1 cut(s) | 113 |
| PfeI | GAWTC | 1 cut(s) | 178 |
| PkrI | GCNGC | 2 cut(s) | 355, 379 |
| Psp6I | CCWGG | 1 cut(s) | 408 |
| PspFI | CCCAGC | 1 cut(s) | 309 |
| PspGI | CCWGG | 1 cut(s) | 408 |
| PspN4I | GGNNCC | 3 cut(s) | 195, 314, 315 |
| PspOMI | GGGCCC | 1 cut(s) | 312 |
| PspPI | GGNCC | 2 cut(s) | 312, 313 |
| PstI | CTGCAG | 1 cut(s) | 379 |
| RsaI | GTAC | 1 cut(s) | 264 |
| RsaNI | GTAC | 1 cut(s) | 263 |
| SalI | GTCGAC | 1 cut(s) | 17 |
| SatI | GCNGC | 2 cut(s) | 354, 378 |
| Sau3AI | GATC | 1 cut(s) | 319 |
| Sau96I | GGNCC | 2 cut(s) | 312, 313 |
| ScrFI | CCNGG | 1 cut(s) | 410 |
| SduI | GDGCHC | 1 cut(s) | 316 |
| SetI | ASST | 7 cut(s) | 10, 16, 123, 132, 144, 382, 414 |
| SexAI | ACCWGGT | 1 cut(s) | 408 |
| SfaNI | GCATC | 3 cut(s) | 96, 171, 268 |
| SfcI | CTRYAG | 1 cut(s) | 375 |
| Sse9I | AATT | 1 cut(s) | 348 |
| SsiI | CCGC | 2 cut(s) | 331, 354 |
| StyD4I | CCNGG | 1 cut(s) | 408 |
| TaaI | ACNGT | 2 cut(s) | 328, 360 |
| TaiI | ACGT | 1 cut(s) | 132 |
| TaqI | TCGA | 1 cut(s) | 18 |
| TasI | AATT | 1 cut(s) | 348 |
| TauI | GCSGC | 1 cut(s) | 356 |
| TfiI | GAWTC | 1 cut(s) | 178 |
| TscAI | CASTG | 1 cut(s) | 331 |
| TseI | GCWGC | 1 cut(s) | 377 |
| TspDTI | ATGAA | 2 cut(s) | 17, 24 |
| TspGWI | ACGGA | 2 cut(s) | 231, 359 |
| TspRI | CASTG | 1 cut(s) | 331 |
| XceI | RCATGY | 1 cut(s) | 113 |
| XmiI | GTMKAC | 1 cut(s) | 18 |
| Zsp2I | ATGCAT | 2 cut(s) | 111, 213 |