pycom14g13940

BTB POZ and TAZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0005023
Physical Location & Seq
Reverse (-)
16746828 .. 16748936
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 444 bp
ATGGAGTGCTTGGAGCACATATGCAAGGAAGGTTGCACAAGTGTTGGACCCTACGACATGGAGCCAGGTCACAAGAGGGGCCCATGCAGCAAGTTTTCCACGTGTCAAGGACTCCAGATGCTGTTCCAGCACTTCGCCACGTGTAAACGGAGGGTGAATGGAGGGTGCTTGCGTTGCAAGCGCATGTGGCAGCTTCTTAAGCTTCACTCTTCAATGTGCGACGAACCTGATTCTTGCAGAGTCCCTCTGTGCAGGCAATTCAAGTTGAAAATGCAGCAAGAGAAAAAGAGAGACGAGGCCAGGTGGAAACTGCTTGTGAAGAAGGTGGTGTCGGCCAAAACCATATCTTCCCTGTCTCTGCCAAAGAGGAAGAGGGAGGAAGAATTAGGAGAAGCAAGAAGCACGACTCCTCCTCCTAATGGAATTAGAAGTTTCAGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009553 GO:0009555 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009737 GO:0009738 GO:0009743 GO:0009751 GO:0009753 GO:0009755 GO:0009756 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010167 GO:0010182 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0014070 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045935 GO:0046677 GO:0048229 GO:0048511 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051246 GO:0051252 GO:0051338 GO:0051347 GO:0051603 GO:0051716 GO:0051972 GO:0051973 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071365 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0097305 GO:0097306 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700 GO:1901701 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2000278 GO:2000573 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04340 ko04341 map04340 map04341
Pfam Domains
Protein Families
BTB zf-TAZ

Protein Analysis

148

Amino Acids

16.96

Weight (kDa)

9.63

Isoelectric Point (pI)

68.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-TAZ PF02135 1 - 84 1.4e-11 TAZ zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 333
AcvI CACGTG 2 cut(s) 102, 141
AfiI CCNNNNNNNGG 1 cut(s) 419
AflII CTTAAG 1 cut(s) 197
AflIII ACRYGT 2 cut(s) 101, 140
AgsI TTSAA 3 cut(s) 213, 262, 268
AjnI CCWGG 2 cut(s) 64, 299
AluBI AGCT 2 cut(s) 193, 202
AluI AGCT 2 cut(s) 193, 202
Alw21I GWGCWC 1 cut(s) 18
Alw26I GTCTC 2 cut(s) 285, 360
AlwNI CAGNNNCTG 1 cut(s) 121
AoxI GGCC 3 cut(s) 79, 297, 333
ApaI GGGCCC 1 cut(s) 83
ApeKI GCWGC 3 cut(s) 87, 190, 274
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 3 cut(s) 47, 79, 80
AsuHPI GGTGA 1 cut(s) 166
AvaII GGWCC 1 cut(s) 47
BaeGI GKGCMC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 83
BbrPI CACGTG 2 cut(s) 102, 141
Bbv12I GWGCWC 1 cut(s) 18
BbvI GCAGC 3 cut(s) 99, 202, 286
BciT130I CCWGG 2 cut(s) 66, 301
BcoDI GTCTC 2 cut(s) 285, 360
BfrI CTTAAG 1 cut(s) 197
BisI GCNGC 3 cut(s) 88, 191, 275
BlsI GCNGC 3 cut(s) 89, 192, 276
Bme1390I CCNGG 2 cut(s) 66, 301
Bme18I GGWCC 1 cut(s) 47
BmgT120I GGNCC 3 cut(s) 47, 79, 80
BmiI GGNNCC 4 cut(s) 49, 63, 80, 81
BmrFI CCNGG 2 cut(s) 66, 301
BmsI GCATC 1 cut(s) 108
BpmI CTGGAG 1 cut(s) 98
BsaAI YACGTR 2 cut(s) 102, 141
BsaXI ACNNNNNCTCC 4 cut(s) 394, 397, 424, 427
Bsc4I CCNNNNNNNGG 1 cut(s) 419
BseBI CCWGG 2 cut(s) 66, 301
BseLI CCNNNNNNNGG 1 cut(s) 419
BseRI GAGGAG 2 cut(s) 399, 402
BseSI GKGCMC 1 cut(s) 83
BseXI GCAGC 3 cut(s) 99, 202, 286
BsgI GTGCAG 1 cut(s) 271
BshFI GGCC 3 cut(s) 81, 299, 335
BsiHKAI GWGCWC 1 cut(s) 18
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 1 cut(s) 419
BsmAI GTCTC 2 cut(s) 285, 360
BsmBI CGTCTC 1 cut(s) 285
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 3 cut(s) 81, 299, 335
Bsp120I GGGCCC 1 cut(s) 79
Bsp1286I GDGCHC 2 cut(s) 18, 83
BspANI GGCC 3 cut(s) 81, 299, 335
BspLI GGNNCC 4 cut(s) 49, 63, 80, 81
BspTI CTTAAG 1 cut(s) 197
Bst2UI CCWGG 2 cut(s) 66, 301
Bst6I CTCTTC 2 cut(s) 214, 365
BstAFI CTTAAG 1 cut(s) 197
BstBAI YACGTR 2 cut(s) 102, 141
BstC8I GCNNGC 3 cut(s) 170, 179, 254
BstHHI GCGC 1 cut(s) 183
BstMAI GTCTC 2 cut(s) 285, 360
BstMWI GCNNNNNNNGC 6 cut(s) 87, 127, 174, 178, 187, 199
BstNI CCWGG 2 cut(s) 66, 301
BstNSI RCATGY 1 cut(s) 187
BstSCI CCNGG 2 cut(s) 64, 299
BstSLI GKGCMC 1 cut(s) 83
BstV1I GCAGC 3 cut(s) 99, 202, 286
BsuRI GGCC 3 cut(s) 81, 299, 335
Cac8I GCNNGC 3 cut(s) 170, 179, 254
CaiI CAGNNNCTG 1 cut(s) 121
CfoI GCGC 1 cut(s) 183
Cfr13I GGNCC 3 cut(s) 47, 79, 80
CviAII CATG 3 cut(s) 58, 84, 184
CviJI RGCY 6 cut(s) 64, 81, 193, 202, 299, 335
CviKI_1 RGCY 6 cut(s) 64, 81, 193, 202, 299, 335
EaeI YGGCCR 1 cut(s) 333
Eam1104I CTCTTC 2 cut(s) 214, 365
EarI CTCTTC 2 cut(s) 214, 365
Eco24I GRGCYC 1 cut(s) 83
Eco47I GGWCC 1 cut(s) 47
Eco72I CACGTG 2 cut(s) 102, 141
EcoO109I RGGNCCY 1 cut(s) 79
EcoRII CCWGG 2 cut(s) 64, 299
EcoT38I GRGCYC 1 cut(s) 83
Esp3I CGTCTC 1 cut(s) 285
FaeI CATG 3 cut(s) 61, 87, 187
FaiI YATR 6 cut(s) 20, 22, 59, 85, 185, 344
FaqI GGGAC 1 cut(s) 227
FatI CATG 3 cut(s) 57, 83, 183
FauNDI CATATG 1 cut(s) 20
Fnu4HI GCNGC 3 cut(s) 88, 191, 275
FriOI GRGCYC 1 cut(s) 83
Fsp4HI GCNGC 3 cut(s) 88, 191, 275
GlaI GCGC 1 cut(s) 182
GluI GCNGC 3 cut(s) 88, 191, 275
GsuI CTGGAG 1 cut(s) 98
HaeIII GGCC 3 cut(s) 81, 299, 335
HhaI GCGC 1 cut(s) 183
Hin1II CATG 3 cut(s) 61, 87, 187
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 200
HinfI GANTC 4 cut(s) 111, 230, 240, 406
HphI GGTGA 1 cut(s) 166
Hpy166II GTNNAC 1 cut(s) 146
Hpy188I TCNGA 1 cut(s) 437
Hpy188III TCNNGA 1 cut(s) 115
Hpy8I GTNNAC 1 cut(s) 146
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 2 cut(s) 23, 316
HpyCH4IV ACGT 2 cut(s) 101, 140
HpyCH4V TGCA 7 cut(s) 24, 36, 87, 177, 237, 252, 274
HpyF10VI GCNNNNNNNGC 6 cut(s) 87, 127, 174, 178, 187, 199
HpySE526I ACGT 2 cut(s) 101, 140
Hsp92II CATG 3 cut(s) 61, 87, 187
HspAI GCGC 1 cut(s) 181
LmnI GCTCC 2 cut(s) 13, 61
LpnPI CCDG 9 cut(s) 51, 78, 128, 140, 238, 240, 286, 313, 365
Lsp1109I GCAGC 3 cut(s) 99, 202, 286
LweI GCATC 1 cut(s) 108
MaeII ACGT 2 cut(s) 101, 140
MaeIII GTNAC 1 cut(s) 68
MboII GAAGA 5 cut(s) 201, 331, 339, 382, 392
MhlI GDGCHC 2 cut(s) 18, 83
MluCI AATT 3 cut(s) 257, 383, 423
MlyI GAGTC 3 cut(s) 105, 249, 400
MmeI TCCRAC 1 cut(s) 25
MseI TTAA 1 cut(s) 198
MspCI CTTAAG 1 cut(s) 197
MspR9I CCNGG 2 cut(s) 66, 301
MvaI CCWGG 2 cut(s) 66, 301
MwoI GCNNNNNNNGC 6 cut(s) 87, 127, 174, 178, 187, 199
NdeI CATATG 1 cut(s) 20
NlaIII CATG 3 cut(s) 61, 87, 187
NlaIV GGNNCC 4 cut(s) 49, 63, 80, 81
NmuCI GTSAC 1 cut(s) 68
NspI RCATGY 1 cut(s) 187
PfeI GAWTC 1 cut(s) 230
PkrI GCNGC 3 cut(s) 89, 192, 276
PleI GAGTC 3 cut(s) 105, 248, 400
PmaCI CACGTG 2 cut(s) 102, 141
PmlI CACGTG 2 cut(s) 102, 141
PpsI GAGTC 3 cut(s) 105, 248, 400
Ppu21I YACGTR 2 cut(s) 102, 141
Psp6I CCWGG 2 cut(s) 64, 299
PspCI CACGTG 2 cut(s) 102, 141
PspGI CCWGG 2 cut(s) 64, 299
PspN4I GGNNCC 4 cut(s) 49, 63, 80, 81
PspOMI GGGCCC 1 cut(s) 79
PspPI GGNCC 3 cut(s) 47, 79, 80
PstNI CAGNNNCTG 1 cut(s) 121
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 3 cut(s) 88, 191, 275
Sau96I GGNCC 3 cut(s) 47, 79, 80
SchI GAGTC 3 cut(s) 105, 249, 400
ScrFI CCNGG 2 cut(s) 66, 301
SduI GDGCHC 2 cut(s) 18, 83
SetI ASST 9 cut(s) 34, 70, 104, 143, 195, 204, 229, 305, 327
SfaNI GCATC 1 cut(s) 108
SinI GGWCC 1 cut(s) 47
SmlI CTYRAG 1 cut(s) 197
SmoI CTYRAG 1 cut(s) 197
Sse9I AATT 3 cut(s) 257, 383, 423
StyD4I CCNGG 2 cut(s) 64, 299
TaiI ACGT 2 cut(s) 104, 143
TasI AATT 3 cut(s) 257, 383, 423
TfiI GAWTC 1 cut(s) 230
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TseFI GTSAC 1 cut(s) 68
TseI GCWGC 3 cut(s) 87, 190, 274
Tsp45I GTSAC 1 cut(s) 68
TspGWI ACGGA 1 cut(s) 163
Vha464I CTTAAG 1 cut(s) 197
VpaK11BI GGWCC 1 cut(s) 47
XceI RCATGY 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.