pycom14g16780

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
18953139 .. 18953675
537 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 249 bp
ATGGCAAAAGCTATCATGGCATTCACCATTACCACTCCACACATTCACAGCTCTTCTCTCCAAACAACAAAGTTGGACATCAGCAGCTCATCTACCATATTGCTTAGGCAGTCTTCTAGCTCTGAACTATTCAGCGGCTGCAAGCAGATTGAATCAGGGAAAAAGAGCAAAAGAGCCTCTTTCTGCAGAACAAATATTTTCCCAGATTGGCCTTTGATGGCAGTTCTAGTTGAGCATATAGAAGGATAG

Protein Analysis

83

Amino Acids

9.01

Weight (kDa)

9.18

Isoelectric Point (pI)

86.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 135
AgsI TTSAA 1 cut(s) 152
AluBI AGCT 4 cut(s) 11, 51, 87, 120
AluI AGCT 4 cut(s) 11, 51, 87, 120
AlwNI CAGNNNCTG 1 cut(s) 138
AoxI GGCC 1 cut(s) 209
ApeKI GCWGC 2 cut(s) 84, 138
AsuHPI GGTGA 1 cut(s) 16
BbsI GAAGAC 1 cut(s) 105
BbvI GCAGC 2 cut(s) 96, 125
BccI CCATC 1 cut(s) 211
BfaI CTAG 2 cut(s) 117, 227
BfmI CTRYAG 1 cut(s) 184
BisI GCNGC 3 cut(s) 85, 136, 139
BlsI GCNGC 3 cut(s) 86, 137, 140
BpiI GAAGAC 1 cut(s) 105
Bpu10I CCTNAGC 1 cut(s) 104
BseXI GCAGC 2 cut(s) 96, 125
BshFI GGCC 1 cut(s) 211
BsmI GAATGC 1 cut(s) 20
BsnI GGCC 1 cut(s) 211
BspACI CCGC 1 cut(s) 135
BspANI GGCC 1 cut(s) 211
BspMAI CTGCAG 1 cut(s) 188
BspQI GCTCTTC 1 cut(s) 58
Bst6I CTCTTC 1 cut(s) 58
BstC8I GCNNGC 1 cut(s) 143
BstDEI CTNAG 1 cut(s) 104
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstSFI CTRYAG 1 cut(s) 184
BstV1I GCAGC 2 cut(s) 96, 125
BstV2I GAAGAC 1 cut(s) 105
BsuRI GGCC 1 cut(s) 211
Cac8I GCNNGC 1 cut(s) 143
CaiI CAGNNNCTG 1 cut(s) 138
CviAII CATG 1 cut(s) 16
CviJI RGCY 7 cut(s) 11, 51, 87, 120, 138, 176, 211
CviKI_1 RGCY 7 cut(s) 11, 51, 87, 120, 138, 176, 211
DdeI CTNAG 1 cut(s) 104
Eam1104I CTCTTC 1 cut(s) 58
EarI CTCTTC 1 cut(s) 58
FaeI CATG 1 cut(s) 19
FaiI YATR 4 cut(s) 17, 98, 237, 239
FalI AAGNNNNNCTT 2 cut(s) 163, 195
FatI CATG 1 cut(s) 15
Fnu4HI GCNGC 3 cut(s) 85, 136, 139
Fsp4HI GCNGC 3 cut(s) 85, 136, 139
FspBI CTAG 2 cut(s) 117, 227
GluI GCNGC 3 cut(s) 85, 136, 139
HaeIII GGCC 1 cut(s) 211
Hin1II CATG 1 cut(s) 19
HinfI GANTC 1 cut(s) 152
HphI GGTGA 1 cut(s) 16
Hpy188I TCNGA 1 cut(s) 124
HpyAV CCTTC 1 cut(s) 236
HpyCH4V TGCA 2 cut(s) 141, 186
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 1 cut(s) 104
Hsp92II CATG 1 cut(s) 19
LguI GCTCTTC 1 cut(s) 58
LpnPI CCDG 2 cut(s) 141, 216
Lsp1109I GCAGC 2 cut(s) 96, 125
MaeI CTAG 2 cut(s) 117, 227
MboII GAAGA 2 cut(s) 45, 105
MmeI TCCRAC 1 cut(s) 54
MnlI CCTC 1 cut(s) 187
MspA1I CMGCKG 1 cut(s) 135
Mva1269I GAATGC 1 cut(s) 20
MwoI GCNNNNNNNGC 1 cut(s) 17
NlaIII CATG 1 cut(s) 19
PciSI GCTCTTC 1 cut(s) 58
PctI GAATGC 1 cut(s) 20
PfeI GAWTC 1 cut(s) 152
PkrI GCNGC 3 cut(s) 86, 137, 140
PstI CTGCAG 1 cut(s) 188
PstNI CAGNNNCTG 1 cut(s) 138
SapI GCTCTTC 1 cut(s) 58
SatI GCNGC 3 cut(s) 85, 136, 139
SetI ASST 4 cut(s) 13, 53, 89, 122
SfcI CTRYAG 1 cut(s) 184
SgeI CNNG 6 cut(s) 28, 129, 154, 168, 215, 239
SsiI CCGC 1 cut(s) 135
SspI AATATT 1 cut(s) 196
SspMI CTAG 2 cut(s) 117, 227
TauI GCSGC 1 cut(s) 138
TfiI GAWTC 1 cut(s) 152
TseI GCWGC 2 cut(s) 84, 138
XspI CTAG 2 cut(s) 117, 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.