Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0004959

Physical Location & Seq

Genomic Coordinates Forward (+)

141912 .. 143842

Gene Structure 1931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGAGTCCTTGGAGCCAAAAACCAAACCAAAACAATCTCATCCATTCGCCAGTCAAATTCAACGGCACGATGGCCAGCACTCCGACGGTCGACGCCAGAAGCGGCTTCTGCAGTTCCAATTCGGTATTCTACAGCAAGCGCAGGCCCATACCACTCCCGCCCAACGACTCCCTCGACATCACAACCTTCATTTCCTCTCAGGCCCACCGTGGCAACGTGGCCTTCATCGACGGCTCCACCGGCCAACAACTCACCTACGTTCAATTATGGGATGCCGTCCGTTCAGTTGCCTCTTCGCTCTCCGACATGGGCATCCGAAAGGGCCACGTCGTCCTCCTCCTGTCCCCGAACTCCATCTTCTTCCCGGTCGTCTGCCTGGCCGTGATGTCGCTGGGCTCGATCATAACAACCACCAACCCCCTCAACACTTCTCGAGAAATCGCCAAGCAAATCGCCGATTCCAAACCGGTGCTCGCCTTCACTACTCGCCAGCTCATCCCCAAACTCGCCGGTCCAAATCCTCTCCCCATCGTCCTCATCGATGACGAAATTGATGCGCCCATTGATAATAAAAGTTTTGTGAATACCTTGGGAAAGATGATGTCGAATAAAAAACATGATGGGTTGAAATCGAGGGAAGCGATCATCCAGGACAACACGGCGACGCTGCTTTACTCGTCGGGAACGACGGGGGCGAGTAAAGGCGTGGTGTCGTCTCACAGGAATCTGATAGCGATGGTCCAGACCGTTATCGGCCGGTTCTATTCGGACGATAACCACCACCAAACGTTCCTCTGCACGGTTCCCATGTTCCACATCTATGGTTTGGTGGCGTTCGCGACGGGCCTACTTGCCTCCGGATCGACGATTGTCGTACTCCCTAAGTTCGAGATGCATGACATGCTTTTGTCCATCCAGAGGAACCGCGTCAGCTATCTGCCGCTGGTGCCTCCCATACTGGTGGCGCTGATTAACGCCGCCGACCAGCTGAAGGCCAAGTACGATCTGAGTTCGTTGAGGTGGGTGCTATCGGGTGGGGCCCCGCTGAGCAAGGAAGTGATCGAGGGGTTCTTGGAGAAGTATCCTATGGTGACGATTCTTCAGGGTTATGGATTGACGGAATCGACAGGAATCGGAGCGTCAACGGATTCGCTGGACGAGAGTCGCAAGTACGGTACGGCGGGGATGTTGTCGGCGAGCATGGAAGCTATGATTGTGGATCCGGACAGCGGTCATCCACTAGCGGCGAATAAGACGGGAGAGCTCTGGCTCAAAGGTCCCACGATCATGAAAGGTTTTTTAGTAACGCAGAAGCGACTGCATCGACGCTTGATTCAAAAGGGTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00592 ko01100 ko01110 map00592 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

450

Amino Acids

48.7

Weight (kDa)

9.33

Isoelectric Point (pI)

43.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	67 - 434	1e-85	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20480 AT1G20490 AT1G20490 AT1G20500 AT1G20510 AT1G20510 AT1G20510 AT5G38120 AT5G38120 AT5G38120 AT5G38120
fragaria_vesca	FvH4_2g37640 FvH4_2g37640 FvH4_2g37640 FvH4_2g37640
malus_domestica	MD08G1004000.v1.1 MD15G1003500.v1.1
prunus_persica	Prupe.1G355900_v2.0.a1
pyrus_communis	pycom15g00250
rosa_chinensis	RchiOBHm_Chr6g0304091
rosa_laevigata	RLG00000011015
rosa_multiflora	Rmu_sc0003805.1_g000004 Rmu_sc0030558.1_g000003
rosa_roxburghii	Rroxscaffold_7G00164090
rosa_rugosa	Rorug06G0327500
rosa_samantha	Rh6AG441500 Rh6BG461300 Rh6CG453600 Rh6DG440900
rosa_wichuraiana	Rw6G038260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	946
AccI	GTMKAC	1 cut(s)	90
AccII	CGCG	2 cut(s)	839, 927
AccIII	TCCGGA	2 cut(s)	857, 1222
AciI	CCGC	9 cut(s)	102, 158, 925, 941, 978, 1043, 1181, 1230, 1244
AclI	AACGTT	1 cut(s)	788
AclWI	GGATC	3 cut(s)	868, 1214, 1227
AcoI	YGGCCR	4 cut(s)	72, 241, 378, 754
AcsI	RAATTY	1 cut(s)	56
AcuI	CTGAAG	2 cut(s)	1010, 1085
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	4 cut(s)	876, 1001, 1172, 1177
AfiI	CCNNNNNNNGG	4 cut(s)	799, 918, 991, 1229
AgeI	ACCGGT	1 cut(s)	466
AgsI	TTSAA	4 cut(s)	61, 263, 628, 1337
AjiI	CACGTC	1 cut(s)	328
AjnI	CCWGG	2 cut(s)	375, 648
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AluBI	AGCT	5 cut(s)	493, 933, 988, 1208, 1264
AluI	AGCT	5 cut(s)	493, 933, 988, 1208, 1264
Alw21I	GWGCWC	2 cut(s)	474, 1266
Alw26I	GTCTC	1 cut(s)	720
AlwI	GGATC	3 cut(s)	868, 1214, 1227
Ama87I	CYCGRG	1 cut(s)	432
Aor13HI	TCCGGA	2 cut(s)	857, 1222
ApaI	GGGCCC	1 cut(s)	1042
ApeKI	GCWGC	1 cut(s)	667
ApoI	RAATTY	1 cut(s)	56
AsiGI	ACCGGT	1 cut(s)	466
AspLEI	GCGC	3 cut(s)	141, 559, 967
AspS9I	GGNCC	9 cut(s)	144, 202, 322, 512, 739, 844, 1038, 1039, 1277
AsuC2I	CCSGG	1 cut(s)	365
AsuHPI	GGTGA	2 cut(s)	244, 1102
AvaI	CYCGRG	1 cut(s)	432
AvaII	GGWCC	3 cut(s)	512, 739, 1277
BaeGI	GKGCMC	1 cut(s)	1042
BalI	TGGCCA	1 cut(s)	74
BamHI	GGATCC	1 cut(s)	1219
BanI	GGYRCC	1 cut(s)	946
BanII	GRGCYC	3 cut(s)	398, 1042, 1266
BarI	GAAGNNNNNNTAC	2 cut(s)	983, 1015
Bbv12I	GWGCWC	2 cut(s)	474, 1266
BbvI	GCAGC	1 cut(s)	654
BccI	CCATC	6 cut(s)	64, 362, 536, 614, 730, 920
BceAI	ACGGC	6 cut(s)	79, 247, 260, 365, 675, 1194
BcgI	CGANNNNNNTGC	2 cut(s)	536, 570
BciT130I	CCWGG	2 cut(s)	377, 650
BciVI	GTATCC	1 cut(s)	1092
BcnI	CCSGG	1 cut(s)	365
BcoDI	GTCTC	1 cut(s)	720
BfaI	CTAG	1 cut(s)	1241
BfmI	CTRYAG	2 cut(s)	109, 130
BfoI	RGCGCY	1 cut(s)	968
BfuI	GTATCC	1 cut(s)	1092
BisI	GCNGC	5 cut(s)	103, 668, 941, 978, 1245
BlpI	GCTNAGC	1 cut(s)	1046
BlsI	GCNGC	5 cut(s)	104, 669, 942, 979, 1246
Bme1390I	CCNGG	3 cut(s)	365, 377, 650
Bme18I	GGWCC	3 cut(s)	512, 739, 1277
BmeT110I	CYCGRG	1 cut(s)	432
BmgBI	CACGTC	1 cut(s)	328
BmgT120I	GGNCC	9 cut(s)	144, 202, 322, 512, 739, 844, 1038, 1039, 1277
BmrFI	CCNGG	3 cut(s)	365, 377, 650
BmsI	GCATC	5 cut(s)	262, 321, 544, 882, 1330
BoxI	GACNNNNGTC	3 cut(s)	869, 1161, 1230
Bpu1102I	GCTNAGC	1 cut(s)	1046
BpuMI	CCSGG	1 cut(s)	365
Bsa29I	ATCGAT	1 cut(s)	540
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	3 cut(s)	8, 208, 588
BsaWI	WCCGGW	3 cut(s)	466, 857, 1222
Bsc4I	CCNNNNNNNGG	4 cut(s)	799, 918, 991, 1229
Bse118I	RCCGGY	4 cut(s)	239, 466, 509, 756
Bse1I	ACTGG	2 cut(s)	50, 963
BseAI	TCCGGA	2 cut(s)	857, 1222
BseBI	CCWGG	2 cut(s)	377, 650
BseCI	ATCGAT	1 cut(s)	540
BseDI	CCNNGG	3 cut(s)	8, 208, 588
BseGI	GGATG	8 cut(s)	39, 277, 312, 495, 645, 912, 1191, 1234
BseLI	CCNNNNNNNGG	4 cut(s)	799, 918, 991, 1229
BseMII	CTCAG	3 cut(s)	212, 998, 1037
BseNI	ACTGG	2 cut(s)	50, 963
BseRI	GAGGAG	1 cut(s)	326
BseSI	GKGCMC	1 cut(s)	1042
BseX3I	CGGCCG	1 cut(s)	754
BseXI	GCAGC	1 cut(s)	654
BseYI	CCCAGC	1 cut(s)	391
BsgI	GTGCAG	1 cut(s)	781
Bsh1236I	CGCG	2 cut(s)	839, 927
Bsh1285I	CGRYCG	3 cut(s)	90, 369, 757
BshNI	GGYRCC	1 cut(s)	946
BshTI	ACCGGT	1 cut(s)	466
BshVI	ATCGAT	1 cut(s)	540
BsiEI	CGRYCG	3 cut(s)	90, 369, 757
BsiHKAI	GWGCWC	2 cut(s)	474, 1266
BsiHKCI	CYCGRG	1 cut(s)	432
BsiSI	CCGG	7 cut(s)	240, 365, 467, 510, 757, 858, 1223
BslFI	GGGAC	2 cut(s)	328, 1263
BslI	CCNNNNNNNGG	4 cut(s)	799, 918, 991, 1229
BsmAI	GTCTC	1 cut(s)	720
BsmBI	CGTCTC	1 cut(s)	720
BsmFI	GGGAC	2 cut(s)	328, 1263
BsoBI	CYCGRG	1 cut(s)	432
Bsp120I	GGGCCC	1 cut(s)	1038
Bsp1286I	GDGCHC	4 cut(s)	398, 474, 1042, 1266
Bsp13I	TCCGGA	2 cut(s)	857, 1222
Bsp143I	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
Bsp1720I	GCTNAGC	1 cut(s)	1046
Bsp68I	TCGCGA	1 cut(s)	839
BspACI	CCGC	9 cut(s)	102, 158, 925, 941, 978, 1043, 1181, 1230, 1244
BspCNI	CTCAG	3 cut(s)	211, 999, 1038
BspDI	ATCGAT	1 cut(s)	540
BspEI	TCCGGA	2 cut(s)	857, 1222
BspFNI	CGCG	2 cut(s)	839, 927
BspHI	TCATGA	1 cut(s)	1287
BspMAI	CTGCAG	1 cut(s)	113
BspPI	GGATC	3 cut(s)	868, 1214, 1227
BspT107I	GGYRCC	1 cut(s)	946
BsrFI	RCCGGY	4 cut(s)	239, 466, 509, 756
BsrI	ACTGG	2 cut(s)	50, 963
BssAI	RCCGGY	4 cut(s)	239, 466, 509, 756
BssECI	CCNNGG	3 cut(s)	8, 208, 588
BssMI	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	2 cut(s)	8, 588
Bst2UI	CCWGG	2 cut(s)	377, 650
Bst4CI	ACNGT	5 cut(s)	88, 209, 748, 802, 1175
Bst6I	CTCTTC	1 cut(s)	298
BstACI	GRCGYC	1 cut(s)	93
BstAPI	GCANNNNNTGC	1 cut(s)	901
BstC8I	GCNNGC	6 cut(s)	76, 137, 143, 474, 491, 1198
BstDEI	CTNAG	4 cut(s)	198, 882, 1007, 1046
BstDSI	CCRYGG	1 cut(s)	208
BstF5I	GGATG	8 cut(s)	39, 277, 312, 495, 645, 912, 1191, 1234
BstFNI	CGCG	2 cut(s)	839, 927
BstH2I	RGCGCY	1 cut(s)	968
BstHHI	GCGC	3 cut(s)	141, 559, 967
BstKTI	GATC	7 cut(s)	402, 645, 863, 1006, 1062, 1222, 1287
BstMAI	GTCTC	1 cut(s)	720
BstMBI	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
BstMCI	CGRYCG	3 cut(s)	90, 369, 757
BstMWI	GCNNNNNNNGC	4 cut(s)	108, 240, 901, 946
BstNI	CCWGG	2 cut(s)	377, 650
BstNSI	RCATGY	1 cut(s)	904
BstPAI	GACNNNNGTC	3 cut(s)	869, 1161, 1230
BstSCI	CCNGG	3 cut(s)	363, 375, 648
BstSFI	CTRYAG	2 cut(s)	109, 130
BstSLI	GKGCMC	1 cut(s)	1042
BstUI	CGCG	2 cut(s)	839, 927
BstV1I	GCAGC	1 cut(s)	654
BstX2I	RGATCY	1 cut(s)	1219
BstXI	CCANNNNNNTGG	2 cut(s)	821, 961
BstYI	RGATCY	1 cut(s)	1219
BstZI	CGGCCG	1 cut(s)	754
Bsu15I	ATCGAT	1 cut(s)	540
BsuI	GTATCC	1 cut(s)	1092
BsuTUI	ATCGAT	1 cut(s)	540
BtgI	CCRYGG	1 cut(s)	208
BtgZI	GCGATG	1 cut(s)	749
BtrI	CACGTC	1 cut(s)	328
BtsCI	GGATG	8 cut(s)	39, 277, 312, 495, 645, 912, 1191, 1234
BtuMI	TCGCGA	1 cut(s)	839
Cac8I	GCNNGC	6 cut(s)	76, 137, 143, 474, 491, 1198
CciI	TCATGA	1 cut(s)	1287
CfoI	GCGC	3 cut(s)	141, 559, 967
Cfr10I	RCCGGY	4 cut(s)	239, 466, 509, 756
Cfr13I	GGNCC	9 cut(s)	144, 202, 322, 512, 739, 844, 1038, 1039, 1277
ClaI	ATCGAT	1 cut(s)	540
CseI	GACGC	5 cut(s)	101, 673, 916, 1128, 1335
Csp6I	GTAC	4 cut(s)	875, 1000, 1171, 1176
CspAI	ACCGGT	1 cut(s)	466
CviAII	CATG	7 cut(s)	307, 617, 808, 896, 901, 1201, 1288
CviQI	GTAC	4 cut(s)	875, 1000, 1171, 1176
DdeI	CTNAG	4 cut(s)	198, 882, 1007, 1046
DpnI	GATC	7 cut(s)	401, 644, 862, 1005, 1061, 1221, 1286
DpnII	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
EaeI	YGGCCR	4 cut(s)	72, 241, 378, 754
EagI	CGGCCG	1 cut(s)	754
Eam1104I	CTCTTC	1 cut(s)	298
EarI	CTCTTC	1 cut(s)	298
Ecl136II	GAGCTC	1 cut(s)	1264
EclXI	CGGCCG	1 cut(s)	754
Eco130I	CCWWGG	2 cut(s)	8, 588
Eco24I	GRGCYC	3 cut(s)	398, 1042, 1266
Eco47I	GGWCC	3 cut(s)	512, 739, 1277
Eco52I	CGGCCG	1 cut(s)	754
Eco53kI	GAGCTC	1 cut(s)	1264
Eco57I	CTGAAG	2 cut(s)	1010, 1085
Eco88I	CYCGRG	1 cut(s)	432
EcoICRI	GAGCTC	1 cut(s)	1264
EcoO109I	RGGNCCY	3 cut(s)	1038, 1039, 1277
EcoRII	CCWGG	2 cut(s)	375, 648
EcoT14I	CCWWGG	2 cut(s)	8, 588
EcoT22I	ATGCAT	1 cut(s)	897
EcoT38I	GRGCYC	3 cut(s)	398, 1042, 1266
ErhI	CCWWGG	2 cut(s)	8, 588
Esp3I	CGTCTC	1 cut(s)	720
FaeI	CATG	7 cut(s)	310, 620, 811, 899, 904, 1204, 1291
FaqI	GGGAC	2 cut(s)	328, 1263
FatI	CATG	7 cut(s)	306, 616, 807, 895, 900, 1200, 1287
FauI	CCCGC	3 cut(s)	165, 1050, 1174
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	5 cut(s)	103, 668, 941, 978, 1245
FokI	GGATG	8 cut(s)	26, 284, 299, 482, 632, 899, 1198, 1221
FriOI	GRGCYC	3 cut(s)	398, 1042, 1266
Fsp4HI	GCNGC	5 cut(s)	103, 668, 941, 978, 1245
FspBI	CTAG	1 cut(s)	1241
GlaI	GCGC	3 cut(s)	140, 558, 966
GluI	GCNGC	5 cut(s)	103, 668, 941, 978, 1245
GsaI	CCCAGC	1 cut(s)	395
HaeII	RGCGCY	1 cut(s)	968
HapII	CCGG	7 cut(s)	240, 365, 467, 510, 757, 858, 1223
HgaI	GACGC	5 cut(s)	101, 673, 916, 1128, 1335
HhaI	GCGC	3 cut(s)	141, 559, 967
Hin1I	GRCGYC	1 cut(s)	93
Hin1II	CATG	7 cut(s)	310, 620, 811, 899, 904, 1204, 1291
Hin6I	GCGC	3 cut(s)	139, 557, 965
HinP1I	GCGC	3 cut(s)	139, 557, 965
HincII	GTYRAC	2 cut(s)	91, 1143
HindII	GTYRAC	2 cut(s)	91, 1143
HpaII	CCGG	7 cut(s)	240, 365, 467, 510, 757, 858, 1223
HphI	GGTGA	2 cut(s)	244, 1102
Hpy166II	GTNNAC	2 cut(s)	91, 1143
Hpy188I	TCNGA	7 cut(s)	84, 304, 317, 729, 769, 1008, 1136
Hpy8I	GTNNAC	2 cut(s)	91, 1143
HpyAV	CCTTC	4 cut(s)	196, 232, 487, 985
HpyCH4III	ACNGT	5 cut(s)	88, 209, 748, 802, 1175
HpyCH4IV	ACGT	4 cut(s)	216, 258, 327, 788
HpyCH4V	TGCA	4 cut(s)	111, 798, 895, 1321
HpyF10VI	GCNNNNNNNGC	4 cut(s)	108, 240, 901, 946
HpyF3I	CTNAG	4 cut(s)	198, 882, 1007, 1046
HpySE526I	ACGT	4 cut(s)	216, 258, 327, 788
Hsp92I	GRCGYC	1 cut(s)	93
Hsp92II	CATG	7 cut(s)	310, 620, 811, 899, 904, 1204, 1291
HspAI	GCGC	3 cut(s)	139, 557, 965
Kpn2I	TCCGGA	2 cut(s)	857, 1222
Kzo9I	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
LmnI	GCTCC	3 cut(s)	12, 239, 1136
Lsp1109I	GCAGC	1 cut(s)	654
LweI	GCATC	5 cut(s)	262, 321, 544, 882, 1330
MaeI	CTAG	1 cut(s)	1241
MaeII	ACGT	4 cut(s)	216, 258, 327, 788
MaeIII	GTNAC	2 cut(s)	1090, 1303
MalI	GATC	7 cut(s)	401, 644, 862, 1005, 1061, 1221, 1286
MboI	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
MboII	GAAGA	4 cut(s)	285, 349, 352, 1091
MflI	RGATCY	1 cut(s)	1219
MhlI	GDGCHC	4 cut(s)	398, 474, 1042, 1266
MlsI	TGGCCA	1 cut(s)	74
MluCI	AATT	4 cut(s)	56, 118, 263, 549
MluNI	TGGCCA	1 cut(s)	74
MlyI	GAGTC	3 cut(s)	13, 161, 1171
MmeI	TCCRAC	2 cut(s)	107, 327
Mox20I	TGGCCA	1 cut(s)	74
Mph1103I	ATGCAT	1 cut(s)	897
MroI	TCCGGA	2 cut(s)	857, 1222
MscI	TGGCCA	1 cut(s)	74
MseI	TTAA	1 cut(s)	972
MslI	CAYNNNNRTG	3 cut(s)	819, 959, 1286
Msp20I	TGGCCA	1 cut(s)	74
MspA1I	CMGCKG	4 cut(s)	943, 988, 1045, 1230
MspI	CCGG	7 cut(s)	240, 365, 467, 510, 757, 858, 1223
MspR9I	CCNGG	3 cut(s)	365, 377, 650
MvaI	CCWGG	2 cut(s)	377, 650
MvnI	CGCG	2 cut(s)	839, 927
MwoI	GCNNNNNNNGC	4 cut(s)	108, 240, 901, 946
NciI	CCSGG	1 cut(s)	365
NdeII	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
NlaIII	CATG	7 cut(s)	310, 620, 811, 899, 904, 1204, 1291
NmuCI	GTSAC	1 cut(s)	1090
NruI	TCGCGA	1 cut(s)	839
NsiI	ATGCAT	1 cut(s)	897
NspI	RCATGY	1 cut(s)	904
PaeR7I	CTCGAG	1 cut(s)	432
PagI	TCATGA	1 cut(s)	1287
PcsI	WCGNNNNNNNCGW	6 cut(s)	171, 395, 537, 638, 683, 692
PfeI	GAWTC	7 cut(s)	458, 724, 1096, 1121, 1131, 1148, 1333
PfoI	TCCNGGA	1 cut(s)	648
PinAI	ACCGGT	1 cut(s)	466
PkrI	GCNGC	5 cut(s)	104, 669, 942, 979, 1246
PleI	GAGTC	3 cut(s)	12, 161, 1170
PpsI	GAGTC	3 cut(s)	12, 161, 1170
PpuMI	RGGWCCY	1 cut(s)	1277
PshAI	GACNNNNGTC	3 cut(s)	869, 1161, 1230
Psp124BI	GAGCTC	1 cut(s)	1266
Psp1406I	AACGTT	1 cut(s)	788
Psp5II	RGGWCCY	1 cut(s)	1277
Psp6I	CCWGG	2 cut(s)	375, 648
PspFI	CCCAGC	1 cut(s)	391
PspGI	CCWGG	2 cut(s)	375, 648
PspOMI	GGGCCC	1 cut(s)	1038
PspPI	GGNCC	9 cut(s)	144, 202, 322, 512, 739, 844, 1038, 1039, 1277
PspPPI	RGGWCCY	1 cut(s)	1277
PstI	CTGCAG	1 cut(s)	113
PsuI	RGATCY	1 cut(s)	1219
PvuII	CAGCTG	1 cut(s)	988
RruI	TCGCGA	1 cut(s)	839
RsaI	GTAC	4 cut(s)	876, 1001, 1172, 1177
RsaNI	GTAC	4 cut(s)	875, 1000, 1171, 1176
RseI	CAYNNNNRTG	3 cut(s)	819, 959, 1286
SacI	GAGCTC	1 cut(s)	1266
SalI	GTCGAC	1 cut(s)	89
SaqAI	TTAA	1 cut(s)	972
SatI	GCNGC	5 cut(s)	103, 668, 941, 978, 1245
Sau3AI	GATC	7 cut(s)	399, 642, 860, 1003, 1059, 1219, 1284
Sau96I	GGNCC	9 cut(s)	144, 202, 322, 512, 739, 844, 1038, 1039, 1277
SchI	GAGTC	3 cut(s)	13, 161, 1171
ScrFI	CCNGG	3 cut(s)	365, 377, 650
SduI	GDGCHC	4 cut(s)	398, 474, 1042, 1266
SfaNI	GCATC	5 cut(s)	262, 321, 544, 882, 1330
SfcI	CTRYAG	2 cut(s)	109, 130
Sfr274I	CTCGAG	1 cut(s)	432
SinI	GGWCC	3 cut(s)	512, 739, 1277
SlaI	CTCGAG	1 cut(s)	432
SmiMI	CAYNNNNRTG	3 cut(s)	819, 959, 1286
SmlI	CTYRAG	1 cut(s)	432
SmoI	CTYRAG	1 cut(s)	432
Sse9I	AATT	4 cut(s)	56, 118, 263, 549
SsiI	CCGC	9 cut(s)	102, 158, 925, 941, 978, 1043, 1181, 1230, 1244
SspMI	CTAG	1 cut(s)	1241
SstI	GAGCTC	1 cut(s)	1266
StyD4I	CCNGG	3 cut(s)	363, 375, 648
StyI	CCWWGG	2 cut(s)	8, 588
TaaI	ACNGT	5 cut(s)	88, 209, 748, 802, 1175
TaiI	ACGT	4 cut(s)	219, 261, 330, 791
TasI	AATT	4 cut(s)	56, 118, 263, 549
TauI	GCSGC	4 cut(s)	105, 943, 980, 1247
TfiI	GAWTC	7 cut(s)	458, 724, 1096, 1121, 1131, 1148, 1333
Tru1I	TTAA	1 cut(s)	972
Tru9I	TTAA	1 cut(s)	972
TseFI	GTSAC	1 cut(s)	1090
TseI	GCWGC	1 cut(s)	667
Tsp45I	GTSAC	1 cut(s)	1090
TspDTI	ATGAA	3 cut(s)	178, 214, 1304
TspGWI	ACGGA	3 cut(s)	269, 1133, 1160
VpaK11BI	GGWCC	3 cut(s)	512, 739, 1277
XapI	RAATTY	1 cut(s)	56
XceI	RCATGY	1 cut(s)	904
XhoI	CTCGAG	1 cut(s)	432
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	1 cut(s)	1241
Zsp2I	ATGCAT	1 cut(s)	897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.