Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004959

Physical Location & Seq

Genomic Coordinates Reverse (-)

62454455 .. 62456863

Gene Structure 2409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G038260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGCACCTCCGTCTCCGGCCGCCGCCGTCGATCCCAGAAGCGGCTTCTGCAAATCCAACTCCATCTTCTACAGCAAGCGCAAACCAATCCCTCTCTCACCCAACGACTCCCTCGACGTCACCACATTCATTTCGTCTCATGCCCACCGCGGCCGCATCGCCTTCATCGACGCCGCCACCGGCCGCCACCTCACCTACTCCCAACTCTGGCGAGCAGTCGACTCCGTCGCCTCCTCTCTCTCGGACATGGGCATCCGAAAAGGCCACGTCATCCTCCTTCTCTCCCCCAACTCTATCTTCTTCCCCGTCGTCTGCCTCGCCGTCATGTCCATCGGCGCCATCATAACCACCACCAACCCTCTCAACACCACCCGCGAGATCACTAAACAGGTGGCGGATTCGAAACCCGTCCTCGCCTTCACAACTCGGGAGCTACTCCCTAAGCTCGCCGGGTTCGCTTCCAATAACATAGTCTTGATGGACGGTGCTGATCAAGCTGCTAAGACTAAGAGCAGTAAAAAAGTGTTGACGCTGGCGGCGATGATGAACAGGCCGCCCACCGGAGGCCGGTACAGGGAGACAGTGAACCAAAACGACACGGCGACTCTGCTGTATTCTTCGGGAACGACAGGAGCCAGCAAAGGCGTGGTGTCGTCTCACCGGAACCTGATCGCGACGGTCGTGACCATCCTGGGGAGATTCGCCGCGCAAGTACAAGAGGAGGAGCAAACGTTCCTCTGCACTGTTCCGATGTTCCACATATACGGCCTGGCGACGTTCGCCACCGGTTTCCTGACGTCAGGATCCACCATCGTCATTCTCTCCAAGTTCGATATGCACGGGTTAACGGCGCGCTCGCTGCACTTGGTTCTGTGTGGTGGGGCCCCCTTGGGCAAGGAAATGATTGAGGGGTTCGTGGAGAAGTTTCCTGCGGTCAGCATTCTACAGGGGTACGGCTTGACCGAGTCAACGGGGCTGGGAGCCTCGACGGACACGTTGGAGGAGAGCCGGAGGTACGGCACGGCGGGGATGCTGTCGTCGAGCATGGAGGCCAAGATTGTGGACCCCGACAGCGGCCAGGCTTTGACGGTCAATAAGACCGGTGAGCTTTGGCTCAAGGGTCCCACCATCATGAAAGGATACTTCTGCAACGATGACGCCACTGCATCGACGCTTGATACGGAAGGATGGTTAAGGACCGGAGATCTTTGTTACATTGATGATGATGGATTCATCTTTGTGGTTGATAGGTTGAAGGAGCTTATTAAATACAAGGCATTTCAGGTGCCCCCAGCGGAATTGGAGGCTTTGTTACTCACTCATCCCCAAATTGCTGATGCTGCTGTTATACCATTTCCTGATGAAAAGGTGGGGCAGTTTCCGATGGCATATGTGGTAAGAAAAGCCGGAAGCAATTTATCGGAGACGGCTGTCATGGACTTCATAGCGAAACAGGTGGCTCCGTACAAGAGGATTAGGAAAGTGGCGTTTATAGCTTCGGTACCGAAGAATCCATCTGGCAAGATTCTCAGGAAGGATCTTATTCAGCTTGCAACTTCTTCTTCTAAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00592 ko01100 ko01110 map00592 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

524

Amino Acids

56.44

Weight (kDa)

9.01

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	48 - 278	1.3e-48	AMP-binding enzyme
AMP-binding	PF00501	285 - 382	7e-24	AMP-binding enzyme
AMP-binding_C	PF13193	433 - 508	2.4e-18	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20480 AT1G20490 AT1G20490 AT1G20500 AT1G20510 AT1G20510 AT1G20510 AT5G38120 AT5G38120 AT5G38120 AT5G38120
fragaria_vesca	FvH4_2g37640 FvH4_2g37640 FvH4_2g37640 FvH4_2g37640
malus_domestica	MD08G1004000.v1.1 MD15G1003500.v1.1
prunus_persica	Prupe.1G355900_v2.0.a1
pyrus_communis	pycom15g00250
rosa_chinensis	RchiOBHm_Chr6g0304091
rosa_laevigata	RLG00000011015
rosa_multiflora	Rmu_sc0003805.1_g000004 Rmu_sc0030558.1_g000003
rosa_roxburghii	Rroxscaffold_7G00164090
rosa_rugosa	Rorug06G0327500
rosa_samantha	Rh6AG441500 Rh6BG461300 Rh6CG453600 Rh6DG440900
rosa_wichuraiana	Rw6G038260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	120, 800
Acc65I	GGTACC	1 cut(s)	1501
AccB1I	GGYRCC	4 cut(s)	4, 335, 1285, 1501
AccI	GTMKAC	1 cut(s)	219
AccII	CGCG	5 cut(s)	150, 375, 674, 707, 853
AclI	AACGTT	1 cut(s)	731
AclWI	GGATC	4 cut(s)	26, 798, 811, 1545
AcoI	YGGCCR	4 cut(s)	18, 151, 181, 1075
AcyI	GRCGYC	5 cut(s)	117, 171, 336, 797, 1158
AfaI	GTAC	6 cut(s)	572, 714, 953, 1016, 1466, 1503
AfiI	CCNNNNNNNGG	8 cut(s)	41, 207, 560, 563, 567, 574, 693, 1073
AflIII	ACRYGT	1 cut(s)	993
AgeI	ACCGGT	2 cut(s)	785, 1100
AgsI	TTSAA	1 cut(s)	1255
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	3 cut(s)	690, 768, 1077
AjuI	GAANNNNNNNTTGG	4 cut(s)	50, 82, 281, 313
AloI	GAACNNNNNNTCC	2 cut(s)	716, 748
AluBI	AGCT	7 cut(s)	433, 445, 497, 1108, 1261, 1496, 1549
AluI	AGCT	7 cut(s)	433, 445, 497, 1108, 1261, 1496, 1549
Alw26I	GTCTC	5 cut(s)	18, 141, 572, 660, 1418
AlwI	GGATC	4 cut(s)	26, 798, 811, 1545
Ama87I	CYCGRG	1 cut(s)	426
ApaI	GGGCCC	1 cut(s)	886
ApeKI	GCWGC	3 cut(s)	497, 859, 1340
AsiGI	ACCGGT	2 cut(s)	785, 1100
Asp718I	GGTACC	1 cut(s)	1501
AspLEI	GCGC	5 cut(s)	81, 338, 709, 853, 855
AspS9I	GGNCC	5 cut(s)	882, 883, 1063, 1121, 1197
AsuC2I	CCSGG	1 cut(s)	451
AsuHPI	GGTGA	5 cut(s)	90, 112, 184, 650, 1115
AsuII	TTCGAA	1 cut(s)	401
AvaI	CYCGRG	1 cut(s)	426
AvaII	GGWCC	3 cut(s)	1063, 1121, 1197
BaeGI	GKGCMC	2 cut(s)	886, 1290
BamHI	GGATCC	1 cut(s)	803
BanI	GGYRCC	4 cut(s)	4, 335, 1285, 1501
BanII	GRGCYC	1 cut(s)	886
BbvI	GCAGC	3 cut(s)	484, 846, 1327
BceAI	ACGGC	9 cut(s)	11, 305, 615, 781, 864, 970, 1033, 1038, 1443
BciT130I	CCWGG	3 cut(s)	692, 770, 1079
BciVI	GTATCC	1 cut(s)	1133
BclI	TGATCA	1 cut(s)	490
BcnI	CCSGG	1 cut(s)	451
BcoDI	GTCTC	5 cut(s)	18, 141, 572, 660, 1418
BfmI	CTRYAG	2 cut(s)	70, 944
BfoI	RGCGCY	1 cut(s)	339
BfuI	GTATCC	1 cut(s)	1133
BglII	AGATCT	1 cut(s)	1204
Bme1390I	CCNGG	4 cut(s)	451, 692, 770, 1079
Bme18I	GGWCC	3 cut(s)	1063, 1121, 1197
BmeT110I	CYCGRG	1 cut(s)	426
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	5 cut(s)	882, 883, 1063, 1121, 1197
BmrFI	CCNGG	4 cut(s)	451, 692, 770, 1079
BmsI	GCATC	5 cut(s)	165, 261, 1020, 1175, 1327
BoxI	GACNNNNGTC	1 cut(s)	1430
Bpu10I	CCTNAGC	1 cut(s)	441
Bpu14I	TTCGAA	1 cut(s)	401
BpuEI	CTTGAG	1 cut(s)	1100
BpuMI	CCSGG	1 cut(s)	451
BsaHI	GRCGYC	5 cut(s)	117, 171, 336, 797, 1158
BsaJI	CCNNGG	3 cut(s)	148, 691, 888
BsaWI	WCCGGW	5 cut(s)	560, 660, 785, 1100, 1199
BsaXI	ACNNNNNCTCC	4 cut(s)	716, 746, 1295, 1325
Bsc4I	CCNNNNNNNGG	8 cut(s)	41, 207, 560, 563, 567, 574, 693, 1073
Bse118I	RCCGGY	4 cut(s)	179, 567, 785, 1100
BseBI	CCWGG	3 cut(s)	692, 770, 1079
BseDI	CCNNGG	3 cut(s)	148, 691, 888
BseGI	GGATG	6 cut(s)	252, 270, 687, 1035, 1193, 1321
BseLI	CCNNNNNNNGG	8 cut(s)	41, 207, 560, 563, 567, 574, 693, 1073
BseMII	CTCAG	1 cut(s)	1543
BsePI	GCGCGC	1 cut(s)	851
BseRI	GAGGAG	4 cut(s)	223, 734, 737, 1016
BseSI	GKGCMC	2 cut(s)	886, 1290
BseX3I	CGGCCG	3 cut(s)	18, 151, 181
BseXI	GCAGC	3 cut(s)	484, 846, 1327
BseYI	CCCAGC	2 cut(s)	976, 1291
BsgI	GTGCAG	2 cut(s)	724, 845
Bsh1236I	CGCG	5 cut(s)	150, 375, 674, 707, 853
Bsh1285I	CGRYCG	4 cut(s)	21, 154, 184, 681
BshNI	GGYRCC	4 cut(s)	4, 335, 1285, 1501
BshTI	ACCGGT	2 cut(s)	785, 1100
BsiEI	CGRYCG	4 cut(s)	21, 154, 184, 681
BsiHKCI	CYCGRG	1 cut(s)	426
BslFI	GGGAC	1 cut(s)	1107
BslI	CCNNNNNNNGG	8 cut(s)	41, 207, 560, 563, 567, 574, 693, 1073
BsmAI	GTCTC	5 cut(s)	18, 141, 572, 660, 1418
BsmBI	CGTCTC	4 cut(s)	18, 141, 660, 1418
BsmFI	GGGAC	1 cut(s)	1107
BsmI	GAATGC	1 cut(s)	939
BsoBI	CYCGRG	1 cut(s)	426
Bsp119I	TTCGAA	1 cut(s)	401
Bsp120I	GGGCCC	1 cut(s)	882
Bsp1286I	GDGCHC	2 cut(s)	886, 1290
Bsp143I	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
Bsp68I	TCGCGA	1 cut(s)	674
BspCNI	CTCAG	1 cut(s)	1542
BspFNI	CGCG	5 cut(s)	150, 375, 674, 707, 853
BspHI	TCATGA	1 cut(s)	1131
BspPI	GGATC	4 cut(s)	26, 798, 811, 1545
BspT104I	TTCGAA	1 cut(s)	401
BspT107I	GGYRCC	4 cut(s)	4, 335, 1285, 1501
BsrFI	RCCGGY	4 cut(s)	179, 567, 785, 1100
BssAI	RCCGGY	4 cut(s)	179, 567, 785, 1100
BssECI	CCNNGG	3 cut(s)	148, 691, 888
BssHII	GCGCGC	1 cut(s)	851
BssMI	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
BssNI	GRCGYC	5 cut(s)	117, 171, 336, 797, 1158
BssT1I	CCWWGG	1 cut(s)	888
Bst2UI	CCWGG	3 cut(s)	692, 770, 1079
Bst4CI	ACNGT	5 cut(s)	485, 583, 679, 745, 1090
BstACI	GRCGYC	5 cut(s)	117, 171, 336, 797, 1158
BstBI	TTCGAA	1 cut(s)	401
BstC8I	GCNNGC	8 cut(s)	77, 213, 447, 534, 637, 853, 857, 1551
BstDEI	CTNAG	4 cut(s)	441, 501, 507, 1529
BstDSI	CCRYGG	1 cut(s)	148
BstF5I	GGATG	6 cut(s)	252, 270, 687, 1035, 1193, 1321
BstFNI	CGCG	5 cut(s)	150, 375, 674, 707, 853
BstH2I	RGCGCY	1 cut(s)	339
BstHHI	GCGC	5 cut(s)	81, 338, 709, 853, 855
BstKTI	GATC	7 cut(s)	34, 381, 493, 672, 806, 1207, 1540
BstMAI	GTCTC	5 cut(s)	18, 141, 572, 660, 1418
BstMBI	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
BstMCI	CGRYCG	4 cut(s)	21, 154, 184, 681
BstMWI	GCNNNNNNNGC	7 cut(s)	48, 455, 494, 779, 859, 1340, 1493
BstNI	CCWGG	3 cut(s)	692, 770, 1079
BstPAI	GACNNNNGTC	1 cut(s)	1430
BstSCI	CCNGG	4 cut(s)	449, 690, 768, 1077
BstSFI	CTRYAG	2 cut(s)	70, 944
BstSLI	GKGCMC	2 cut(s)	886, 1290
BstUI	CGCG	5 cut(s)	150, 375, 674, 707, 853
BstV1I	GCAGC	3 cut(s)	484, 846, 1327
BstX2I	RGATCY	3 cut(s)	803, 1204, 1537
BstXI	CCANNNNNNTGG	1 cut(s)	1060
BstYI	RGATCY	3 cut(s)	803, 1204, 1537
BstZI	CGGCCG	3 cut(s)	18, 151, 181
BsuI	GTATCC	1 cut(s)	1133
BtgI	CCRYGG	1 cut(s)	148
BtgZI	GCGATG	2 cut(s)	142, 554
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	6 cut(s)	252, 270, 687, 1035, 1193, 1321
BtsI	GCAGTG	1 cut(s)	1161
BtsIMutI	CAGTG	3 cut(s)	588, 741, 1161
BtuMI	TCGCGA	1 cut(s)	674
Cac8I	GCNNGC	8 cut(s)	77, 213, 447, 534, 637, 853, 857, 1551
CciI	TCATGA	1 cut(s)	1131
CciNI	GCGGCCGC	1 cut(s)	151
CfoI	GCGC	5 cut(s)	81, 338, 709, 853, 855
Cfr10I	RCCGGY	4 cut(s)	179, 567, 785, 1100
Cfr13I	GGNCC	5 cut(s)	882, 883, 1063, 1121, 1197
Cfr42I	CCGCGG	1 cut(s)	151
CseI	GACGC	4 cut(s)	179, 538, 1166, 1180
Csp6I	GTAC	6 cut(s)	571, 713, 952, 1015, 1465, 1502
CspAI	ACCGGT	2 cut(s)	785, 1100
CviAII	CATG	6 cut(s)	140, 247, 325, 1045, 1132, 1435
CviQI	GTAC	6 cut(s)	571, 713, 952, 1015, 1465, 1502
DdeI	CTNAG	4 cut(s)	441, 501, 507, 1529
DinI	GGCGCC	1 cut(s)	337
DpnI	GATC	7 cut(s)	33, 380, 492, 671, 805, 1206, 1539
DpnII	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
EaeI	YGGCCR	4 cut(s)	18, 151, 181, 1075
EagI	CGGCCG	3 cut(s)	18, 151, 181
EciI	GGCGGA	1 cut(s)	410
EclXI	CGGCCG	3 cut(s)	18, 151, 181
Eco130I	CCWWGG	1 cut(s)	888
Eco24I	GRGCYC	1 cut(s)	886
Eco47I	GGWCC	3 cut(s)	1063, 1121, 1197
Eco52I	CGGCCG	3 cut(s)	18, 151, 181
Eco88I	CYCGRG	1 cut(s)	426
EcoO109I	RGGNCCY	3 cut(s)	882, 883, 1121
EcoRII	CCWGG	3 cut(s)	690, 768, 1077
EcoT14I	CCWWGG	1 cut(s)	888
EcoT38I	GRGCYC	1 cut(s)	886
EgeI	GGCGCC	1 cut(s)	337
EheI	GGCGCC	1 cut(s)	337
ErhI	CCWWGG	1 cut(s)	888
Esp3I	CGTCTC	4 cut(s)	18, 141, 660, 1418
FaeI	CATG	6 cut(s)	143, 250, 328, 1048, 1135, 1438
FaqI	GGGAC	1 cut(s)	1107
FatI	CATG	6 cut(s)	139, 246, 324, 1044, 1131, 1434
FauI	CCCGC	2 cut(s)	380, 1018
FauNDI	CATATG	1 cut(s)	1390
FbaI	TGATCA	1 cut(s)	490
FblI	GTMKAC	1 cut(s)	219
FokI	GGATG	6 cut(s)	239, 257, 674, 1042, 1200, 1308
FriOI	GRGCYC	1 cut(s)	886
GlaI	GCGC	5 cut(s)	80, 337, 708, 852, 854
GsaI	CCCAGC	2 cut(s)	980, 1295
HaeII	RGCGCY	1 cut(s)	339
HgaI	GACGC	4 cut(s)	179, 538, 1166, 1180
HhaI	GCGC	5 cut(s)	81, 338, 709, 853, 855
Hin1I	GRCGYC	5 cut(s)	117, 171, 336, 797, 1158
Hin1II	CATG	6 cut(s)	143, 250, 328, 1048, 1135, 1438
Hin6I	GCGC	5 cut(s)	79, 336, 707, 851, 853
HinP1I	GCGC	5 cut(s)	79, 336, 707, 851, 853
HincII	GTYRAC	4 cut(s)	220, 528, 846, 969
HindII	GTYRAC	4 cut(s)	220, 528, 846, 969
HinfI	GANTC	9 cut(s)	107, 221, 398, 604, 699, 965, 1230, 1510, 1525
HpaI	GTTAAC	1 cut(s)	846
HphI	GGTGA	5 cut(s)	90, 112, 184, 650, 1115
Hpy166II	GTNNAC	6 cut(s)	220, 528, 586, 846, 969, 1063
Hpy188I	TCNGA	5 cut(s)	244, 257, 750, 1383, 1423
Hpy8I	GTNNAC	6 cut(s)	220, 528, 586, 846, 969, 1063
HpyAV	CCTTC	6 cut(s)	172, 287, 427, 1178, 1249, 1528
HpyCH4III	ACNGT	5 cut(s)	485, 583, 679, 745, 1090
HpyCH4IV	ACGT	6 cut(s)	117, 267, 731, 776, 797, 995
HpyCH4V	TGCA	7 cut(s)	51, 741, 838, 862, 1149, 1166, 1553
HpyF10VI	GCNNNNNNNGC	7 cut(s)	48, 455, 494, 779, 859, 1340, 1493
HpyF3I	CTNAG	4 cut(s)	441, 501, 507, 1529
HpySE526I	ACGT	6 cut(s)	117, 267, 731, 776, 797, 995
Hsp92I	GRCGYC	5 cut(s)	117, 171, 336, 797, 1158
Hsp92II	CATG	6 cut(s)	143, 250, 328, 1048, 1135, 1438
HspAI	GCGC	5 cut(s)	79, 336, 707, 851, 853
KasI	GGCGCC	1 cut(s)	335
KflI	GGGWCCC	1 cut(s)	1121
KpnI	GGTACC	1 cut(s)	1505
Ksp22I	TGATCA	1 cut(s)	490
KspAI	GTTAAC	1 cut(s)	846
KspI	CCGCGG	1 cut(s)	151
Kzo9I	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
LmnI	GCTCC	6 cut(s)	430, 632, 724, 980, 1258, 1465
Lsp1109I	GCAGC	3 cut(s)	484, 846, 1327
LweI	GCATC	5 cut(s)	165, 261, 1020, 1175, 1327
MaeII	ACGT	6 cut(s)	117, 267, 731, 776, 797, 995
MaeIII	GTNAC	4 cut(s)	118, 682, 1211, 1311
MalI	GATC	7 cut(s)	33, 380, 492, 671, 805, 1206, 1539
MboI	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
MboII	GAAGA	7 cut(s)	58, 289, 292, 609, 1519, 1551, 1554
MflI	RGATCY	3 cut(s)	803, 1204, 1537
MhlI	GDGCHC	2 cut(s)	886, 1290
MluCI	AATT	3 cut(s)	1298, 1329, 1414
Mly113I	GGCGCC	1 cut(s)	336
MlyI	GAGTC	4 cut(s)	101, 215, 598, 974
MmeI	TCCRAC	2 cut(s)	81, 978
MseI	TTAA	3 cut(s)	845, 1193, 1266
MslI	CAYNNNNRTG	2 cut(s)	1130, 1238
MspA1I	CMGCKG	3 cut(s)	150, 1074, 1295
MspR9I	CCNGG	4 cut(s)	451, 692, 770, 1079
Mva1269I	GAATGC	1 cut(s)	939
MvaI	CCWGG	3 cut(s)	692, 770, 1079
MvnI	CGCG	5 cut(s)	150, 375, 674, 707, 853
MwoI	GCNNNNNNNGC	7 cut(s)	48, 455, 494, 779, 859, 1340, 1493
NarI	GGCGCC	1 cut(s)	336
NciI	CCSGG	1 cut(s)	451
NdeI	CATATG	1 cut(s)	1390
NdeII	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
NlaIII	CATG	6 cut(s)	143, 250, 328, 1048, 1135, 1438
NmuCI	GTSAC	2 cut(s)	118, 682
NotI	GCGGCCGC	1 cut(s)	151
NruI	TCGCGA	1 cut(s)	674
NspV	TTCGAA	1 cut(s)	401
PagI	TCATGA	1 cut(s)	1131
PauI	GCGCGC	1 cut(s)	851
PcsI	WCGNNNNNNNCGW	6 cut(s)	111, 165, 536, 678, 960, 992
PctI	GAATGC	1 cut(s)	939
PfeI	GAWTC	5 cut(s)	398, 699, 1230, 1510, 1525
PflFI	GACNNNGTC	2 cut(s)	224, 964
PinAI	ACCGGT	2 cut(s)	785, 1100
PleI	GAGTC	4 cut(s)	101, 215, 598, 973
PluTI	GGCGCC	1 cut(s)	339
PpsI	GAGTC	4 cut(s)	101, 215, 598, 973
PpuMI	RGGWCCY	1 cut(s)	1121
PshAI	GACNNNNGTC	1 cut(s)	1430
Psp1406I	AACGTT	1 cut(s)	731
Psp5II	RGGWCCY	1 cut(s)	1121
Psp6I	CCWGG	3 cut(s)	690, 768, 1077
PspFI	CCCAGC	2 cut(s)	976, 1291
PspGI	CCWGG	3 cut(s)	690, 768, 1077
PspOMI	GGGCCC	1 cut(s)	882
PspPI	GGNCC	5 cut(s)	882, 883, 1063, 1121, 1197
PspPPI	RGGWCCY	1 cut(s)	1121
PsuI	RGATCY	3 cut(s)	803, 1204, 1537
PsyI	GACNNNGTC	2 cut(s)	224, 964
PteI	GCGCGC	1 cut(s)	851
RruI	TCGCGA	1 cut(s)	674
RsaI	GTAC	6 cut(s)	572, 714, 953, 1016, 1466, 1503
RsaNI	GTAC	6 cut(s)	571, 713, 952, 1015, 1465, 1502
RseI	CAYNNNNRTG	2 cut(s)	1130, 1238
SacII	CCGCGG	1 cut(s)	151
SalI	GTCGAC	1 cut(s)	218
SaqAI	TTAA	3 cut(s)	845, 1193, 1266
Sau3AI	GATC	7 cut(s)	31, 378, 490, 669, 803, 1204, 1537
Sau96I	GGNCC	5 cut(s)	882, 883, 1063, 1121, 1197
SchI	GAGTC	4 cut(s)	101, 215, 598, 974
ScrFI	CCNGG	4 cut(s)	451, 692, 770, 1079
SduI	GDGCHC	2 cut(s)	886, 1290
SfaNI	GCATC	5 cut(s)	165, 261, 1020, 1175, 1327
SfcI	CTRYAG	2 cut(s)	70, 944
SfoI	GGCGCC	1 cut(s)	337
Sfr303I	CCGCGG	1 cut(s)	151
SfuI	TTCGAA	1 cut(s)	401
SgrBI	CCGCGG	1 cut(s)	151
SinI	GGWCC	3 cut(s)	1063, 1121, 1197
SmiMI	CAYNNNNRTG	2 cut(s)	1130, 1238
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
Sse9I	AATT	3 cut(s)	1298, 1329, 1414
SspDI	GGCGCC	1 cut(s)	335
StyD4I	CCNGG	4 cut(s)	449, 690, 768, 1077
StyI	CCWWGG	1 cut(s)	888
TaaI	ACNGT	5 cut(s)	485, 583, 679, 745, 1090
TaiI	ACGT	6 cut(s)	120, 270, 734, 779, 800, 998
TaqI	TCGA	9 cut(s)	30, 114, 168, 219, 401, 831, 986, 1040, 1169
TaqII	GACCGA	1 cut(s)	977
TasI	AATT	3 cut(s)	1298, 1329, 1414
TatI	WGTACW	1 cut(s)	712
TfiI	GAWTC	5 cut(s)	398, 699, 1230, 1510, 1525
Tru1I	TTAA	3 cut(s)	845, 1193, 1266
Tru9I	TTAA	3 cut(s)	845, 1193, 1266
TscAI	CASTG	3 cut(s)	588, 748, 1168
TseFI	GTSAC	2 cut(s)	118, 682
TseI	GCWGC	3 cut(s)	497, 859, 1340
Tsp45I	GTSAC	2 cut(s)	118, 682
TspDTI	ATGAA	7 cut(s)	118, 154, 560, 1148, 1222, 1377, 1432
TspGWI	ACGGA	4 cut(s)	214, 1004, 1196, 1452
TspRI	CASTG	3 cut(s)	588, 748, 1168
Tth111I	GACNNNGTC	2 cut(s)	224, 964
VpaK11BI	GGWCC	3 cut(s)	1063, 1121, 1197
XcmI	CCANNNNNNNNNTGG	1 cut(s)	643
XmiI	GTMKAC	1 cut(s)	219
ZraI	GACGTC	2 cut(s)	118, 798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.