Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0008557

Physical Location & Seq

Genomic Coordinates Reverse (-)

2899690 .. 2903732

Gene Structure 4043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g04860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGATAGCTTACGCGGAGTGCTTCGTCCACGAAAACGACTCCGAATCCAGGCCCGATGGCGGCGTCTCAAGCCTCTCCAAGGCACTGGACCTCCAGGGCAGCGTCGCCGACTGCGGCGCGGATGCAGCCAGAGACTTTGGCGGAATGAATTCCATCTCGCCGCTAGCCTTTCTTCGGCCGGCGGGTGTAGAAGATGTGGCAAGGGTGGTGAAGGCGGCGACGAGGTCGTCGAATCTAACGGTGGCGGCGCGCGGCAACGGCCACTCGATCAACGGCCAGGCTATGGCGGATCGAGGCCTCGTCTTGGACATGCGGTCGTTGGGGGAGCATTTCCGGGTTGTGAGGGCCAGGGATGGCTCCTTCTACGCTGACGTGTCGGGAGGGGCATTATGGGAAGACGTGCTGAAGCGGTGCGTTTTCGAGTACGGGATGGCGCCGCGGTCGTGGACGGATTACTTGAGCTTGACGGTGGGCGGGACGTTATCCAACGCGGGCGTCAGCGGTCAGGCTTTCCGTTACGGTCCGCAAACGTCGAACGTAACGGAGTTAGAAGTCGTTACAGGCAAAGGCGAAATTTTTAACTGCTCCGAAACGGAAAACTCGGAGCTGTTTTTCGGCGCGCTCGGCGGACTCGGTCAGTTCGGTATCATCACCAAAGCTAGGGTTCTTCTCCAACCAGCCCCGGACATGGTGAGATGGATAAGGCTGGTGTACAACGAGTTTGACGACTTCACCCGGGACGCCGAGTTGCTGGTAACTCGGCAGGACGACGGCGACTCGTTCGACTACGTGGAAGGCTTCGCATTCGTCAACAGCGATAACCCGGCGGACGGGCGTCCCTCGGTGCCGCTAGATCCTCAGGAGACATTCGACGCGGCACATCTCCCTCGAACCGCCGGGCCAATCCTCTACTGTCTCGAACTCGCTCGTCATTACCGCAAAGCTGACCACCCCTCAACTGTCGATACGGGCGTGAAGAGATTGCTTGGAGGCCTCGGATTCGTTGAGCAGTTGAAGTTCCAGGTGGACATCAGCTACGTCGAGTTTCTATTGCGTGTGAAGCGCGCAGAGGAACACGCCAAGGCCAATGGAATCTGGGACGCTCCTCACCCTTGGTTGAACATGTTCGTGTCGAAATCAGATATTGCTGATTTCGATCGAACTGTGTTCAAGAAGATCCTCAAGGATGGGATCGGCGGGCCCATGCTTGTCTACCCTCTCCGGCGAAGCAAGTGGGATACTCGTACGTCCGTGGTGCTACCAGAAAGCGAAATCTTCTACATAGTGGCATTGCTACGTTTCACTCCACCATACCCAAAAGGCCCCTCCTCTGAGAATCTGGTGGCTCAGAACCAAGAAATTATACAGTACTGCACCAAGAAAGGGTTCGATTTCAAGTTGTATTTGCCTCACTACATATCCTCAGAGGATTGGAAGCGACATTTCGGAAACGATCGATGGTCGAGATTTGTAGAGCGAAAGATGTGCTTCGATCCGATGGCCATCCTTGCTCCTGGACAAAAAATTTTCTCGAGGGTTCTCAACCCTAGCATTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009308 GO:0009690 GO:0009823 GO:0009987 GO:0010817 GO:0016491 GO:0016645 GO:0019139 GO:0034754 GO:0042445 GO:0042447 GO:0044237 GO:0046483 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 map00908

Pfam Domains

Protein Families

Cytokin-bind FAD_binding_4

Protein Analysis

520

Amino Acids

57.65

Weight (kDa)

5.78

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	54 - 196	1.5e-23	FAD binding domain
Cytokin-bind	PF09265	228 - 510	1.7e-110	Cytokinin dehydrogenase 1, FAD and cytokinin binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21482
fragaria_vesca	FvH4_2g30990 FvH4_2g30990 FvH4_2g30990 FvH4_2g30990 FvH4_2g30990 FvH4_3g04610
malus_domestica	MD08G1071200.v1.1 MD15G1050100.v1.1
prunus_persica	Prupe.1G404300_v2.0.a1 Prupe.1G404300_v2.0.a1 Prupe.1G404300_v2.0.a1
pyrus_communis	pycom08g05900 pycom15g04860
rosa_chinensis	RchiOBHm_Chr6g0311781
rosa_laevigata	RLG00000010374
rosa_multiflora	Rmu_sc0002888.1_g000042
rosa_roxburghii	Rroxscaffold_7G00157310
rosa_samantha	Rh6AG507000 Rh6BG517900 Rh6CG523500 Rh6DG509300
rosa_wichuraiana	Rw6G044110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	226
AccB1I	GGYRCC	2 cut(s)	433, 844
AccB7I	CCANNNNNTGG	1 cut(s)	283
AccI	GTMKAC	1 cut(s)	1212
AccII	CGCG	9 cut(s)	14, 119, 250, 252, 439, 491, 620, 875, 1065
AclWI	GGATC	5 cut(s)	297, 848, 1171, 1199, 1487
AcoI	YGGCCR	4 cut(s)	176, 259, 274, 1500
AcsI	RAATTY	3 cut(s)	148, 573, 1524
AcuI	CTGAAG	1 cut(s)	425
AcyI	GRCGYC	5 cut(s)	63, 434, 495, 741, 835
AfaI	GTAC	4 cut(s)	425, 713, 1246, 1370
AflIII	ACRYGT	2 cut(s)	372, 1122
AgsI	TTSAA	4 cut(s)	1015, 1120, 1171, 1396
AhdI	GACNNNNNGTC	1 cut(s)	313
AjiI	CACGTC	2 cut(s)	373, 400
AjnI	CCWGG	6 cut(s)	47, 93, 276, 347, 1020, 1513
AjuI	GAANNNNNNNTTGG	2 cut(s)	1370, 1402
AluBI	AGCT	6 cut(s)	8, 462, 607, 659, 944, 1035
AluI	AGCT	6 cut(s)	8, 462, 607, 659, 944, 1035
Alw26I	GTCTC	4 cut(s)	70, 126, 857, 920
AlwI	GGATC	5 cut(s)	297, 848, 1171, 1199, 1487
Ama87I	CYCGRG	2 cut(s)	735, 1531
ApaI	GGGCCC	1 cut(s)	1203
ApeKI	GCWGC	2 cut(s)	99, 125
ApoI	RAATTY	3 cut(s)	148, 573, 1524
Asp700I	GAANNNNTTC	3 cut(s)	148, 1124, 1385
AspLEI	GCGC	8 cut(s)	119, 250, 252, 436, 620, 622, 1065, 1067
AspS9I	GGNCC	8 cut(s)	51, 88, 345, 521, 899, 1199, 1200, 1322
AsuC2I	CCSGG	6 cut(s)	335, 683, 736, 737, 824, 898
AsuHPI	GGTGA	5 cut(s)	220, 643, 703, 724, 1100
AsuNHI	GCTAGC	1 cut(s)	163
AvaI	CYCGRG	2 cut(s)	735, 1531
AvaII	GGWCC	2 cut(s)	88, 521
AxyI	CCTNAGG	1 cut(s)	858
BaeGI	GKGCMC	1 cut(s)	1203
BaeI	ACNNNNGTAYC	2 cut(s)	957, 990
BalI	TGGCCA	1 cut(s)	1502
BanI	GGYRCC	2 cut(s)	433, 844
BanII	GRGCYC	1 cut(s)	1203
BbsI	GAAGAC	1 cut(s)	402
BbvI	GCAGC	2 cut(s)	111, 137
BccI	CCATC	9 cut(s)	50, 161, 347, 424, 690, 1181, 1452, 1492, 1511
BceAI	ACGGC	3 cut(s)	274, 289, 787
BcgI	CGANNNNNNTGC	2 cut(s)	1467, 1501
BciT130I	CCWGG	6 cut(s)	49, 95, 278, 349, 1022, 1515
BciVI	GTATCC	1 cut(s)	1231
BcnI	CCSGG	6 cut(s)	335, 683, 736, 737, 824, 898
BcoDI	GTCTC	4 cut(s)	70, 126, 857, 920
BfaI	CTAG	4 cut(s)	164, 660, 851, 1548
BfoI	RGCGCY	1 cut(s)	437
BfuI	GTATCC	1 cut(s)	1231
BmcAI	AGTACT	1 cut(s)	1370
Bme18I	GGWCC	2 cut(s)	88, 521
BmeRI	GACNNNNNGTC	1 cut(s)	313
BmeT110I	CYCGRG	2 cut(s)	735, 1531
BmgBI	CACGTC	2 cut(s)	373, 400
BmgT120I	GGNCC	8 cut(s)	51, 88, 345, 521, 899, 1199, 1200, 1322
BmiI	GGNNCC	5 cut(s)	358, 435, 846, 1201, 1324
BmsI	GCATC	1 cut(s)	112
BmtI	GCTAGC	1 cut(s)	167
BoxI	GACNNNNGTC	1 cut(s)	834
BpiI	GAAGAC	1 cut(s)	402
BpmI	CTGGAG	1 cut(s)	77
BpuEI	CTTGAG	3 cut(s)	52, 478, 1166
BpuMI	CCSGG	6 cut(s)	335, 683, 736, 737, 824, 898
Bsa29I	ATCGAT	1 cut(s)	1456
BsaAI	YACGTR	1 cut(s)	790
BsaBI	GATNNNNATC	2 cut(s)	1155, 1502
BsaHI	GRCGYC	5 cut(s)	63, 434, 495, 741, 835
BsaXI	ACNNNNNCTCC	2 cut(s)	75, 105
Bse118I	RCCGGY	1 cut(s)	178
Bse1I	ACTGG	1 cut(s)	90
Bse21I	CCTNAGG	1 cut(s)	858
Bse3DI	GCAATG	1 cut(s)	1289
Bse8I	GATNNNNATC	2 cut(s)	1155, 1502
BseBI	CCWGG	6 cut(s)	49, 95, 278, 349, 1022, 1515
BseCI	ATCGAT	1 cut(s)	1456
BseGI	GGATG	5 cut(s)	127, 358, 435, 1192, 1503
BseJI	GATNNNNATC	2 cut(s)	1155, 1502
BseMI	GCAATG	1 cut(s)	1289
BseMII	CTCAG	4 cut(s)	872, 1323, 1361, 1437
BseNI	ACTGG	1 cut(s)	90
BsePI	GCGCGC	3 cut(s)	248, 618, 1063
BseRI	GAGGAG	2 cut(s)	1095, 1318
BseSI	GKGCMC	1 cut(s)	1203
BseX3I	CGGCCG	1 cut(s)	176
BseXI	GCAGC	2 cut(s)	111, 137
BsgI	GTGCAG	1 cut(s)	1357
Bsh1236I	CGCG	9 cut(s)	14, 119, 250, 252, 439, 491, 620, 875, 1065
Bsh1285I	CGRYCG	5 cut(s)	179, 317, 443, 1159, 1456
BshNI	GGYRCC	2 cut(s)	433, 844
BshVI	ATCGAT	1 cut(s)	1456
BsiEI	CGRYCG	5 cut(s)	179, 317, 443, 1159, 1456
BsiHKCI	CYCGRG	2 cut(s)	735, 1531
BsiSI	CCGG	7 cut(s)	179, 334, 683, 736, 824, 897, 1222
BsiWI	CGTACG	1 cut(s)	1244
BslFI	GGGAC	4 cut(s)	490, 752, 822, 1112
BsmAI	GTCTC	4 cut(s)	70, 126, 857, 920
BsmBI	CGTCTC	1 cut(s)	70
BsmFI	GGGAC	4 cut(s)	490, 752, 822, 1112
BsmI	GAATGC	1 cut(s)	803
BsoBI	CYCGRG	2 cut(s)	735, 1531
Bsp120I	GGGCCC	1 cut(s)	1199
Bsp1286I	GDGCHC	1 cut(s)	1203
Bsp1407I	TGTACA	1 cut(s)	711
Bsp143I	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
BspCNI	CTCAG	4 cut(s)	871, 1324, 1360, 1436
BspDI	ATCGAT	1 cut(s)	1456
BspFNI	CGCG	9 cut(s)	14, 119, 250, 252, 439, 491, 620, 875, 1065
BspLI	GGNNCC	5 cut(s)	358, 435, 846, 1201, 1324
BspOI	GCTAGC	1 cut(s)	167
BspPI	GGATC	5 cut(s)	297, 848, 1171, 1199, 1487
BspT107I	GGYRCC	2 cut(s)	433, 844
BsrDI	GCAATG	1 cut(s)	1289
BsrFI	RCCGGY	1 cut(s)	178
BsrGI	TGTACA	1 cut(s)	711
BsrI	ACTGG	1 cut(s)	90
BssAI	RCCGGY	1 cut(s)	178
BssHII	GCGCGC	3 cut(s)	248, 618, 1063
BssMI	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
BssNI	GRCGYC	5 cut(s)	63, 434, 495, 741, 835
BssT1I	CCWWGG	3 cut(s)	78, 1080, 1112
Bst2UI	CCWGG	6 cut(s)	49, 95, 278, 349, 1022, 1515
Bst4CI	ACNGT	7 cut(s)	241, 469, 521, 914, 961, 1165, 1368
Bst6I	CTCTTC	1 cut(s)	971
BstACI	GRCGYC	5 cut(s)	63, 434, 495, 741, 835
BstAUI	TGTACA	1 cut(s)	711
BstBAI	YACGTR	1 cut(s)	790
BstC8I	GCNNGC	7 cut(s)	165, 180, 250, 493, 620, 1065, 1199
BstDEI	CTNAG	4 cut(s)	858, 1332, 1347, 1423
BstDSI	CCRYGG	2 cut(s)	437, 1251
BstENI	CCTNNNNNAGG	1 cut(s)	77
BstF5I	GGATG	5 cut(s)	127, 358, 435, 1192, 1503
BstFNI	CGCG	9 cut(s)	14, 119, 250, 252, 439, 491, 620, 875, 1065
BstH2I	RGCGCY	1 cut(s)	437
BstHHI	GCGC	8 cut(s)	119, 250, 252, 436, 620, 622, 1065, 1067
BstKTI	GATC	8 cut(s)	270, 292, 856, 1159, 1179, 1194, 1456, 1495
BstMAI	GTCTC	4 cut(s)	70, 126, 857, 920
BstMBI	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
BstMCI	CGRYCG	5 cut(s)	179, 317, 443, 1159, 1456
BstMWI	GCNNNNNNNGC	6 cut(s)	69, 125, 258, 624, 1060, 1508
BstNI	CCWGG	6 cut(s)	49, 95, 278, 349, 1022, 1515
BstNSI	RCATGY	2 cut(s)	313, 1126
BstPAI	GACNNNNGTC	1 cut(s)	834
BstSLI	GKGCMC	1 cut(s)	1203
BstUI	CGCG	9 cut(s)	14, 119, 250, 252, 439, 491, 620, 875, 1065
BstV1I	GCAGC	2 cut(s)	111, 137
BstV2I	GAAGAC	1 cut(s)	402
BstX2I	RGATCY	2 cut(s)	853, 1176
BstXI	CCANNNNNNTGG	1 cut(s)	85
BstYI	RGATCY	2 cut(s)	853, 1176
BstZI	CGGCCG	1 cut(s)	176
Bsu15I	ATCGAT	1 cut(s)	1456
Bsu36I	CCTNAGG	1 cut(s)	858
BsuI	GTATCC	1 cut(s)	1231
BsuTUI	ATCGAT	1 cut(s)	1456
BtgI	CCRYGG	2 cut(s)	437, 1251
BtrI	CACGTC	2 cut(s)	373, 400
BtsCI	GGATG	5 cut(s)	127, 358, 435, 1192, 1503
BtsIMutI	CAGTG	1 cut(s)	83
Cac8I	GCNNGC	7 cut(s)	165, 180, 250, 493, 620, 1065, 1199
CfoI	GCGC	8 cut(s)	119, 250, 252, 436, 620, 622, 1065, 1067
Cfr10I	RCCGGY	1 cut(s)	178
Cfr13I	GGNCC	8 cut(s)	51, 88, 345, 521, 899, 1199, 1200, 1322
Cfr42I	CCGCGG	1 cut(s)	440
Cfr9I	CCCGGG	1 cut(s)	735
ClaI	ATCGAT	1 cut(s)	1456
CpoI	CGGWCCG	1 cut(s)	521
CseI	GACGC	7 cut(s)	52, 91, 484, 749, 824, 881, 1109
Csp6I	GTAC	4 cut(s)	424, 712, 1245, 1369
CspI	CGGWCCG	1 cut(s)	521
CviAII	CATG	4 cut(s)	310, 688, 1123, 1204
CviQI	GTAC	4 cut(s)	424, 712, 1245, 1369
DdeI	CTNAG	4 cut(s)	858, 1332, 1347, 1423
DinI	GGCGCC	1 cut(s)	435
DpnI	GATC	8 cut(s)	269, 291, 855, 1158, 1178, 1193, 1455, 1494
DpnII	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
DrdI	GACNNNNNNGTC	1 cut(s)	226
DriI	GACNNNNNGTC	1 cut(s)	313
DseDI	GACNNNNNNGTC	1 cut(s)	226
EaeI	YGGCCR	4 cut(s)	176, 259, 274, 1500
EagI	CGGCCG	1 cut(s)	176
Eam1104I	CTCTTC	1 cut(s)	971
Eam1105I	GACNNNNNGTC	1 cut(s)	313
EarI	CTCTTC	1 cut(s)	971
EciI	GGCGGA	4 cut(s)	156, 302, 642, 842
EclXI	CGGCCG	1 cut(s)	176
Eco130I	CCWWGG	3 cut(s)	78, 1080, 1112
Eco147I	AGGCCT	2 cut(s)	297, 993
Eco24I	GRGCYC	1 cut(s)	1203
Eco47I	GGWCC	2 cut(s)	88, 521
Eco52I	CGGCCG	1 cut(s)	176
Eco57I	CTGAAG	1 cut(s)	425
Eco81I	CCTNAGG	1 cut(s)	858
Eco88I	CYCGRG	2 cut(s)	735, 1531
EcoNI	CCTNNNNNAGG	1 cut(s)	77
EcoO109I	RGGNCCY	1 cut(s)	1322
EcoRI	GAATTC	1 cut(s)	148
EcoRII	CCWGG	6 cut(s)	47, 93, 276, 347, 1020, 1513
EcoT14I	CCWWGG	3 cut(s)	78, 1080, 1112
EcoT38I	GRGCYC	1 cut(s)	1203
EgeI	GGCGCC	1 cut(s)	435
EheI	GGCGCC	1 cut(s)	435
ErhI	CCWWGG	3 cut(s)	78, 1080, 1112
Esp3I	CGTCTC	1 cut(s)	70
FaeI	CATG	4 cut(s)	313, 691, 1126, 1207
FalI	AAGNNNNNCTT	2 cut(s)	1472, 1504
FaqI	GGGAC	4 cut(s)	490, 752, 822, 1112
FatI	CATG	4 cut(s)	309, 687, 1122, 1203
FauI	CCCGC	4 cut(s)	175, 467, 484, 1190
FblI	GTMKAC	1 cut(s)	1212
FokI	GGATG	5 cut(s)	134, 365, 442, 1199, 1490
FriOI	GRGCYC	1 cut(s)	1203
FspBI	CTAG	4 cut(s)	164, 660, 851, 1548
GlaI	GCGC	8 cut(s)	118, 249, 251, 435, 619, 621, 1064, 1066
GsuI	CTGGAG	1 cut(s)	77
HaeII	RGCGCY	1 cut(s)	437
HapII	CCGG	7 cut(s)	179, 334, 683, 736, 824, 897, 1222
HgaI	GACGC	7 cut(s)	52, 91, 484, 749, 824, 881, 1109
HhaI	GCGC	8 cut(s)	119, 250, 252, 436, 620, 622, 1065, 1067
Hin1I	GRCGYC	5 cut(s)	63, 434, 495, 741, 835
Hin1II	CATG	4 cut(s)	313, 691, 1126, 1207
Hin6I	GCGC	8 cut(s)	117, 248, 250, 434, 618, 620, 1063, 1065
HinP1I	GCGC	8 cut(s)	117, 248, 250, 434, 618, 620, 1063, 1065
HincII	GTYRAC	1 cut(s)	811
HindII	GTYRAC	1 cut(s)	811
HinfI	GANTC	8 cut(s)	38, 44, 232, 630, 776, 999, 1092, 1336
HpaII	CCGG	7 cut(s)	179, 334, 683, 736, 824, 897, 1222
HphI	GGTGA	5 cut(s)	220, 643, 703, 724, 1100
Hpy166II	GTNNAC	6 cut(s)	28, 447, 712, 811, 1027, 1213
Hpy188III	TCNNGA	6 cut(s)	378, 860, 917, 1171, 1464, 1531
Hpy8I	GTNNAC	6 cut(s)	28, 447, 712, 811, 1027, 1213
Hpy99I	CGWCG	7 cut(s)	107, 223, 232, 535, 773, 875, 1043
HpyAV	CCTTC	3 cut(s)	205, 370, 788
HpyCH4III	ACNGT	7 cut(s)	241, 469, 521, 914, 961, 1165, 1368
HpyCH4IV	ACGT	9 cut(s)	372, 399, 479, 530, 537, 789, 1038, 1247, 1297
HpyCH4V	TGCA	2 cut(s)	125, 1374
HpyF10VI	GCNNNNNNNGC	6 cut(s)	69, 125, 258, 624, 1060, 1508
HpyF3I	CTNAG	4 cut(s)	858, 1332, 1347, 1423
HpySE526I	ACGT	9 cut(s)	372, 399, 479, 530, 537, 789, 1038, 1247, 1297
Hsp92I	GRCGYC	5 cut(s)	63, 434, 495, 741, 835
Hsp92II	CATG	4 cut(s)	313, 691, 1126, 1207
HspAI	GCGC	8 cut(s)	117, 248, 250, 434, 618, 620, 1063, 1065
KasI	GGCGCC	1 cut(s)	433
KroI	GCCGGC	1 cut(s)	178
KroNI	GCCGGC	1 cut(s)	180
KspI	CCGCGG	1 cut(s)	440
Kzo9I	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
LmnI	GCTCC	6 cut(s)	325, 362, 590, 604, 1108, 1516
Lsp1109I	GCAGC	2 cut(s)	111, 137
LweI	GCATC	1 cut(s)	112
MaeI	CTAG	4 cut(s)	164, 660, 851, 1548
MaeII	ACGT	9 cut(s)	372, 399, 479, 530, 537, 789, 1038, 1247, 1297
MaeIII	GTNAC	4 cut(s)	515, 538, 556, 754
MalI	GATC	8 cut(s)	269, 291, 855, 1158, 1178, 1193, 1455, 1494
MboI	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
MboII	GAAGA	7 cut(s)	164, 203, 407, 659, 988, 1186, 1267
MflI	RGATCY	2 cut(s)	853, 1176
MhlI	GDGCHC	1 cut(s)	1203
MlsI	TGGCCA	1 cut(s)	1502
MluCI	AATT	4 cut(s)	148, 573, 1359, 1524
MluNI	TGGCCA	1 cut(s)	1502
Mly113I	GGCGCC	1 cut(s)	434
MlyI	GAGTC	3 cut(s)	32, 624, 770
MmeI	TCCRAC	2 cut(s)	510, 697
Mox20I	TGGCCA	1 cut(s)	1502
MroNI	GCCGGC	1 cut(s)	178
MroXI	GAANNNNTTC	3 cut(s)	148, 1124, 1385
MscI	TGGCCA	1 cut(s)	1502
MseI	TTAA	1 cut(s)	579
MslI	CAYNNNNRTG	1 cut(s)	1127
Msp20I	TGGCCA	1 cut(s)	1502
MspA1I	CMGCKG	2 cut(s)	439, 501
MspI	CCGG	7 cut(s)	179, 334, 683, 736, 824, 897, 1222
Mva1269I	GAATGC	1 cut(s)	803
MvaI	CCWGG	6 cut(s)	49, 95, 278, 349, 1022, 1515
MvnI	CGCG	9 cut(s)	14, 119, 250, 252, 439, 491, 620, 875, 1065
MwoI	GCNNNNNNNGC	6 cut(s)	69, 125, 258, 624, 1060, 1508
NaeI	GCCGGC	1 cut(s)	180
NarI	GGCGCC	1 cut(s)	434
NciI	CCSGG	6 cut(s)	335, 683, 736, 737, 824, 898
NdeII	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
NgoMIV	GCCGGC	1 cut(s)	178
NheI	GCTAGC	1 cut(s)	163
NlaIII	CATG	4 cut(s)	313, 691, 1126, 1207
NlaIV	GGNNCC	5 cut(s)	358, 435, 846, 1201, 1324
NmeAIII	GCCGAG	3 cut(s)	603, 739, 769
NspI	RCATGY	2 cut(s)	313, 1126
PaeR7I	CTCGAG	1 cut(s)	1531
PauI	GCGCGC	3 cut(s)	248, 618, 1063
PceI	AGGCCT	2 cut(s)	297, 993
PciI	ACATGT	1 cut(s)	1122
PcsI	WCGNNNNNNNCGW	4 cut(s)	227, 723, 813, 969
PctI	GAATGC	1 cut(s)	803
PdiI	GCCGGC	1 cut(s)	180
PdmI	GAANNNNTTC	3 cut(s)	148, 1124, 1385
PfeI	GAWTC	5 cut(s)	44, 232, 999, 1092, 1336
Pfl23II	CGTACG	1 cut(s)	1244
PflFI	GACNNNGTC	2 cut(s)	223, 633
PflMI	CCANNNNNTGG	1 cut(s)	283
PfoI	TCCNGGA	1 cut(s)	1513
Ple19I	CGATCG	2 cut(s)	1159, 1456
PleI	GAGTC	3 cut(s)	32, 624, 770
PluTI	GGCGCC	1 cut(s)	437
PpsI	GAGTC	3 cut(s)	32, 624, 770
Ppu21I	YACGTR	1 cut(s)	790
PscI	ACATGT	1 cut(s)	1122
PshAI	GACNNNNGTC	1 cut(s)	834
Psp6I	CCWGG	6 cut(s)	47, 93, 276, 347, 1020, 1513
PspGI	CCWGG	6 cut(s)	47, 93, 276, 347, 1020, 1513
PspLI	CGTACG	1 cut(s)	1244
PspN4I	GGNNCC	5 cut(s)	358, 435, 846, 1201, 1324
PspOMI	GGGCCC	1 cut(s)	1199
PspPI	GGNCC	8 cut(s)	51, 88, 345, 521, 899, 1199, 1200, 1322
PsuI	RGATCY	2 cut(s)	853, 1176
PsyI	GACNNNGTC	2 cut(s)	223, 633
PteI	GCGCGC	3 cut(s)	248, 618, 1063
PvuI	CGATCG	2 cut(s)	1159, 1456
RsaI	GTAC	4 cut(s)	425, 713, 1246, 1370
RsaNI	GTAC	4 cut(s)	424, 712, 1245, 1369
RseI	CAYNNNNRTG	1 cut(s)	1127
Rsr2I	CGGWCCG	1 cut(s)	521
RsrII	CGGWCCG	1 cut(s)	521
SacII	CCGCGG	1 cut(s)	440
SaqAI	TTAA	1 cut(s)	579
Sau3AI	GATC	8 cut(s)	267, 289, 853, 1156, 1176, 1191, 1453, 1492
Sau96I	GGNCC	8 cut(s)	51, 88, 345, 521, 899, 1199, 1200, 1322
ScaI	AGTACT	1 cut(s)	1370
SchI	GAGTC	3 cut(s)	32, 624, 770
SduI	GDGCHC	1 cut(s)	1203
SfaNI	GCATC	1 cut(s)	112
SfoI	GGCGCC	1 cut(s)	435
Sfr274I	CTCGAG	1 cut(s)	1531
Sfr303I	CCGCGG	1 cut(s)	440
SgrBI	CCGCGG	1 cut(s)	440
SinI	GGWCC	2 cut(s)	88, 521
SlaI	CTCGAG	1 cut(s)	1531
SmaI	CCCGGG	1 cut(s)	737
SmiMI	CAYNNNNRTG	1 cut(s)	1127
SmlI	CTYRAG	4 cut(s)	67, 457, 1181, 1531
SmoI	CTYRAG	4 cut(s)	67, 457, 1181, 1531
Sse9I	AATT	4 cut(s)	148, 573, 1359, 1524
SseBI	AGGCCT	2 cut(s)	297, 993
SspDI	GGCGCC	1 cut(s)	433
SspMI	CTAG	4 cut(s)	164, 660, 851, 1548
StuI	AGGCCT	2 cut(s)	297, 993
StyI	CCWWGG	3 cut(s)	78, 1080, 1112
TaaI	ACNGT	7 cut(s)	241, 469, 521, 914, 961, 1165, 1368
TaiI	ACGT	9 cut(s)	375, 402, 482, 533, 540, 792, 1041, 1250, 1300
TaqII	GACCGA	1 cut(s)	623
TasI	AATT	4 cut(s)	148, 573, 1359, 1524
TatI	WGTACW	2 cut(s)	711, 1368
TauI	GCSGC	9 cut(s)	63, 117, 163, 218, 248, 255, 439, 850, 878
TfiI	GAWTC	5 cut(s)	44, 232, 999, 1092, 1336
Tru1I	TTAA	1 cut(s)	579
Tru9I	TTAA	1 cut(s)	579
TscAI	CASTG	1 cut(s)	90
TseI	GCWGC	2 cut(s)	99, 125
TspDTI	ATGAA	1 cut(s)	161
TspGWI	ACGGA	5 cut(s)	464, 503, 557, 608, 1240
TspMI	CCCGGG	1 cut(s)	735
TspRI	CASTG	1 cut(s)	90
Tth111I	GACNNNGTC	2 cut(s)	223, 633
Van91I	CCANNNNNTGG	1 cut(s)	283
VpaK11BI	GGWCC	2 cut(s)	88, 521
XagI	CCTNNNNNAGG	1 cut(s)	77
XapI	RAATTY	3 cut(s)	148, 573, 1524
XceI	RCATGY	2 cut(s)	313, 1126
XhoI	CTCGAG	1 cut(s)	1531
XmaI	CCCGGG	1 cut(s)	735
XmiI	GTMKAC	1 cut(s)	1212
XmnI	GAANNNNTTC	3 cut(s)	148, 1124, 1385
XspI	CTAG	4 cut(s)	164, 660, 851, 1548
ZrmI	AGTACT	1 cut(s)	1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.